CmaCh04G018900 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G018900
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	50S ribosomal protein L15
Location	Cma_Chr04 : 9822901 .. 9825589 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTACGAAGACGGCTGTGTTACTTACTATCTAGCTCATTTGCTTCAGTTCGTACTAAACCCCCACCTGCTTTTGCAATAAACCAAGCAGTATCACGTCCATTCCTAGAGTTCCAGCGAAACCCTAGCCTTGATCGGAGTGTAGGTTTCCCTCTTTCTGGGAATGTGCTTGGTTTTCGAGCTTACAGCATCTTGAGCTTAAATGATCTGAGAGACAAAGTTCCAAGGAAACAGAAGACGAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACAGCAGGCAGAGGTCACAAGGGTCAAAAAGCGAGAGGTTCTGGGAAGCTAGGGTTTGAAGGGGGTCAAACCCCACTTCGTCGTAGGCTTCCTAAAAGAGGCTTTAAGAATCCTTTCAGCCTCACATTTCAGGTATTTGATTTGTGTTTTCATGTTATTGTTTTGTTGCTTGTGATCTGTATTTTAAAATGCCCACTAAGGTGTGCGCCTTGGTGTGCTTAAACCCAAGGCACGACCTATGTGCCTTGCTTCAAAGAAGTGAGTCTCCCTCATTGAAGCTTGTTGGATGATGAAAGTCCCACATCGACTAATTTAGGGAATGATCATGGGTTTATAAGTAAAGGAATACATCTCCATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTTGTTGATTCTTAACGAAGCCCACTTGAGGCATGCATCTTAGCACTTGTGTTGTGTGCCTTAACGCCTCAAACTTGATTTCTTTTTTCTAATTTTTAAGGAAGAAATATATTAATATTCTTACATTCTCGAATAAAAGCTCTATTTTCTTTAACTTTGTATCATCTTATTATTCATCATACTATTTTTCTTCATATCTTAAAATTTTATTTACATTTTTATTGTACGCCATTAAAAAAAAAAAAGTCCATGCTTAAGCTCCCAAAAGACTATGTGCTCTGGTGCACCTCGAGCTTTAGAAAACACTGCTTGTGATTATTATTTACTTCTCAATTACTTTGTTTTTTTTGGAGGAGTAAGATTAATTTAAAGATGCTCGTTTAACTTTACGCAATAGTTGATGCCAAATTGTGTAATGAATTCCATTTTCATCTTGAAGATAACAAGTCTTTAATATCGATATCTACTAGTAATTTTATTTCAGTAAATAGCATGTGATACGAAATTCATGTTGCATGATCTTTAAAAGAGTTACCTTCTGCACTTTGCATTACTTAATGTATAACACAGTTTGTATCTTCTGATGTTAAGTCCCTAACAATATTATTTTTTTGTATAGTGCAAAAGACAATTCTTTTTGGGCATGGTATTTTTTCCTTGAGTATTATGATAATTCTTGATTCTTTTGTTTTATGACAGCCAGTTGGTTTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTGAATTAATCACTATGAAAACACTCAAGGTATCATGACTTGTATCTTGATTAGTCTTATCAAAAGCCTGAAATACTTGTTTTCTTTTTAATATTGTATTGATTTATTATCCTTACCATTGTGGAATAGGATACTGGTGCAATTGGAAAACAAATACAAGATGGGGTGAGGTTGATGGGACGTGGTGCTGAACAGATTAAGTGGCCAATTCACCTAGAGGTAAATCTTCAACAAAAAAAAGTTTCTTTTTTTTCCTTTTTCTGTTCTGACGTTGACTTCTAAACCTATATGCTCCTTAGTTAAGCTCATATTTCGTATCAATTACTTATAAATCTGAGGTGTTGTCATGCTGCCAATTTGAAGCTAGTGCATTCTTCTGGACGAAGGTTCTAGTGTTGTCGGCGTTCTTCCAGGGTTGCATCTAGCTGTCTTTCTAGTCTAGGTTGGGATCCAATTGCTTTCAGATTGCCGGTATTTGCTATAACAAAAGGAATATTTCTTCCGTTTGTGTAGCTTTGTAGACATTGTTATTTGCTTGTGATTGATGTGCTTAGGCAAGTTTTGTCATAGTTAGAGCTTTCAAGTCTCTCATCTTTAACCATTTGGATTGATCTCAATAGCCTCCGATCTAGCTTCTTCTTGTGCTCGGAACTAATCTTAAATACGTGATGTTTTCAGGTGTCAAGGGTCACTGTTAGGGCGAAGGCAGCGGTGGAAGCCGCTGGAGGGACTGTTAGAAGAGTGTATTACAATAAATTAGGCTTTCAGGCGCTGCTCAAGCCGGAGTGGTTCGAAAAGAAGGGTAGACTGTTACCACGAGCAGCTAGGCCACCCCCAAAGCAACAAGACAAAGTTGACAGCATTGGCCGCTTGCCTGCGCCCACTAAACCCATCCCTTTTTGGGTTGAAGATGGAGGAGACGCAGCTTCCAGTTTGCCTGCCTAGGCAATCATGGTCATTCCCATGAAGGATTTTAACTTTCGATTGTCCCTTTGAAATGCATTTTCTCTGGTTGGTGCTTTTTGTAAGCCGGTTACCATTTTGTTTCTACATATTTTTTAAGGTTCAACGATGGACGGCCGCTCTTCACAGACGTTTTCAGGATTCCGGGTGGTAATAGAAATCACCTCATCTTATTAACTGCAAGTTCAATAAAGATAATATGTGCTTAACTATTAGATTTATACTTAATTTTGTGCCTTCAAAATAAAAATTCAAG

mRNA sequence

ATGCTACGAAGACGGCTGTGTTACTTACTATCTAGCTCATTTGCTTCAGTTCGTACTAAACCCCCACCTGCTTTTGCAATAAACCAAGCAGTATCACGTCCATTCCTAGAGTTCCAGCGAAACCCTAGCCTTGATCGGAGTGTAGGTTTCCCTCTTTCTGGGAATGTGCTTGGTTTTCGAGCTTACAGCATCTTGAGCTTAAATGATCTGAGAGACAAAGTTCCAAGGAAACAGAAGACGAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACAGCAGGCAGAGGTCACAAGGGTCAAAAAGCGAGAGGTTCTGGGAAGCTAGGGTTTGAAGGGGGTCAAACCCCACTTCGTCGTAGGCTTCCTAAAAGAGGCTTTAAGAATCCTTTCAGCCTCACATTTCAGCCAGTTGGTTTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTGAATTAATCACTATGAAAACACTCAAGGATACTGGTGCAATTGGAAAACAAATACAAGATGGGGTGAGGTTGATGGGACGTGGTGCTGAACAGATTAAGTGGCCAATTCACCTAGAGGTGTCAAGGGTCACTGTTAGGGCGAAGGCAGCGGTGGAAGCCGCTGGAGGGACTGTTAGAAGAGTGTATTACAATAAATTAGGCTTTCAGGCGCTGCTCAAGCCGGAGTGGTTCGAAAAGAAGGGTAGACTGTTACCACGAGCAGCTAGGCCACCCCCAAAGCAACAAGACAAAGTTGACAGCATTGGCCGCTTGCCTGCGCCCACTAAACCCATCCCTTTTTGGGTTGAAGATGGAGGAGACGCAGCTTCCAGTTTGCCTGCCTAGGCAATCATGGTCATTCCCATGAAGGATTTTAACTTTCGATTGTCCCTTTGAAATGCATTTTCTCTGGTTGGTGCTTTTTGTAAGCCGGTTACCATTTTGTTTCTACATATTTTTTAAGGTTCAACGATGGACGGCCGCTCTTCACAGACGTTTTCAGGATTCCGGGTGGTAATAGAAATCACCTCATCTTATTAACTGCAAGTTCAATAAAGATAATATGTGCTTAACTATTAGATTTATACTTAATTTTGTGCCTTCAAAATAAAAATTCAAG

Coding sequence (CDS)

ATGCTACGAAGACGGCTGTGTTACTTACTATCTAGCTCATTTGCTTCAGTTCGTACTAAACCCCCACCTGCTTTTGCAATAAACCAAGCAGTATCACGTCCATTCCTAGAGTTCCAGCGAAACCCTAGCCTTGATCGGAGTGTAGGTTTCCCTCTTTCTGGGAATGTGCTTGGTTTTCGAGCTTACAGCATCTTGAGCTTAAATGATCTGAGAGACAAAGTTCCAAGGAAACAGAAGACGAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACAGCAGGCAGAGGTCACAAGGGTCAAAAAGCGAGAGGTTCTGGGAAGCTAGGGTTTGAAGGGGGTCAAACCCCACTTCGTCGTAGGCTTCCTAAAAGAGGCTTTAAGAATCCTTTCAGCCTCACATTTCAGCCAGTTGGTTTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTGAATTAATCACTATGAAAACACTCAAGGATACTGGTGCAATTGGAAAACAAATACAAGATGGGGTGAGGTTGATGGGACGTGGTGCTGAACAGATTAAGTGGCCAATTCACCTAGAGGTGTCAAGGGTCACTGTTAGGGCGAAGGCAGCGGTGGAAGCCGCTGGAGGGACTGTTAGAAGAGTGTATTACAATAAATTAGGCTTTCAGGCGCTGCTCAAGCCGGAGTGGTTCGAAAAGAAGGGTAGACTGTTACCACGAGCAGCTAGGCCACCCCCAAAGCAACAAGACAAAGTTGACAGCATTGGCCGCTTGCCTGCGCCCACTAAACCCATCCCTTTTTGGGTTGAAGATGGAGGAGACGCAGCTTCCAGTTTGCCTGCCTAG

Protein sequence

MLRRRLCYLLSSSFASVRTKPPPAFAINQAVSRPFLEFQRNPSLDRSVGFPLSGNVLGFRAYSILSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFQALLKPEWFEKKGRLLPRAARPPPKQQDKVDSIGRLPAPTKPIPFWVEDGGDAASSLPA

Homology

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BLAST of CmaCh04G018900 vs. Swiss-Prot
Match: RL15_GLUDA (50S ribosomal protein L15 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=rplO PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.1e-29
Identity = 79/152 (51.97%), Postives = 100/152 (65.79%), Query Frame = 1


Query: 65  LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKL-GFEGGQTPLRRRL 124
           ++LN+LRD    R +K R GRGIGSGKGKT+G+G KGQKAR    L GFEGGQ PL RRL
Sbjct: 1   MNLNELRDNAGSRYRKKRLGRGIGSGKGKTSGKGVKGQKAREGVSLNGFEGGQLPLYRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLMGR 184
           PKRGFKN F   + PV LG + K I  GKID+  ++T   L+  G +G     GVRL+ +
Sbjct: 61  PKRGFKNIFRKEYAPVNLGALDKAIADGKIDAGTVVTEDVLRTAGLVGSGKFAGVRLLAK 120

Query: 185 GAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVR 215
           G  ++   + +EVS  +  A AAVE AGG+VR
Sbjct: 121 G--ELARAVTIEVSGASATAVAAVEKAGGSVR 150

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BLAST of CmaCh04G018900 vs. Swiss-Prot
Match: RL15_XANP2 (50S ribosomal protein L15 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=rplO PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 8.0e-29
Identity = 79/151 (52.32%), Postives = 101/151 (66.89%), Query Frame = 1


Query: 65  LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQKAR-GSGKLGFEGGQTPLRRRL 124
           ++L D+RD    RK++ R GRGIGSGKGKTAGRG KGQKAR G    GFEGGQ PL RRL
Sbjct: 1   MNLEDIRDNPGARKKRMRVGRGIGSGKGKTAGRGVKGQKARTGVAIKGFEGGQMPLHRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLMGR 184
           PKRGF N F L +  V LGKI   + AGK+D+ + +T   L   G + ++ +DGVR++G 
Sbjct: 61  PKRGFHNIFRLDYNEVSLGKIQAAVEAGKLDAGQPVTEAALVAAGVL-RRAKDGVRVLGT 120

Query: 185 GAEQIKWPIHLEVSRVTVRAKAAVEAAGGTV 214
           G  ++   + LEV+  T  A AAVE AGG+V
Sbjct: 121 G--ELSAKVTLEVAYATKSAVAAVEKAGGSV 148

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BLAST of CmaCh04G018900 vs. Swiss-Prot
Match: RL15_BRASO (50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain ORS278) GN=rplO PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28
Identity = 76/152 (50.00%), Postives = 107/152 (70.39%), Query Frame = 1


Query: 65  LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKL-GFEGGQTPLRRRL 124
           + L+D+ D    RK++ R GRGIGSGKGKT+GRG KGQ AR   ++ GFEGGQ P+ RRL
Sbjct: 1   MKLSDIADNAGARKKRMRVGRGIGSGKGKTSGRGGKGQTARSGVRIKGFEGGQMPMHRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLMGR 184
           PKRGF N F+L F  + L +I + I+A K+D+  +I  ++L  +GA+ ++ +DGVRL+GR
Sbjct: 61  PKRGFNNIFALDFVEINLDRIQQAIDAKKLDAGSVINAESLVKSGAL-RRSKDGVRLLGR 120

Query: 185 GAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVR 215
           G  ++K  I++EV   +  A AAVE AGGTV+
Sbjct: 121 G--ELKAKINIEVYGASKSAIAAVEKAGGTVK 149

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BLAST of CmaCh04G018900 vs. Swiss-Prot
Match: RL15_RHORT (50S ribosomal protein L15 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) GN=rplO PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.0e-28
Identity = 77/151 (50.99%), Postives = 102/151 (67.55%), Query Frame = 1


Query: 65  LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQKAR-GSGKLGFEGGQTPLRRRL 124
           + LN+LRD     K + R GRGIGSGKGKTAGRG KGQK+R G    GFEGGQ P+ RRL
Sbjct: 1   MKLNELRDNPGATKNRIRVGRGIGSGKGKTAGRGVKGQKSREGVSINGFEGGQMPIYRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLMGR 184
           PKRGF NP   +F  V L +I K I+A K+D++ +IT K L + G + ++ QDGVRL+G+
Sbjct: 61  PKRGFNNPTRKSFAVVNLDRIQKAIDAKKLDATAVITEKALIEAGLV-RRSQDGVRLLGK 120

Query: 185 GAEQIKWPIHLEVSRVTVRAKAAVEAAGGTV 214
           G   +K  + +EV+  +  A+  VE AGGT+
Sbjct: 121 GELSVK--VAIEVAGASATAREGVEKAGGTL 148

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BLAST of CmaCh04G018900 vs. Swiss-Prot
Match: RL15_BRASB (50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rplO PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.0e-28
Identity = 75/152 (49.34%), Postives = 105/152 (69.08%), Query Frame = 1


Query: 65  LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKL-GFEGGQTPLRRRL 124
           + L+D+ D    RK++ R GRGIGSGKGKT+GRG KGQ AR   ++ GFEGGQ P+ RRL
Sbjct: 1   MKLSDIADNAGARKKRMRVGRGIGSGKGKTSGRGGKGQTARSGVRIKGFEGGQMPMHRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLMGR 184
           PKRGF N F+L F  + L +I + I+A K+D+  +I  + L  +GA+ ++ +DGVRL+GR
Sbjct: 61  PKRGFNNIFALDFVEINLDRIQQAIDAKKLDAGSVINAEALVKSGAL-RRAKDGVRLLGR 120

Query: 185 GAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVR 215
           G  +I   +++EV   +  A AAVE AGGTV+
Sbjct: 121 G--EITAKVNIEVHGASKSAIAAVEKAGGTVK 149

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BLAST of CmaCh04G018900 vs. TrEMBL
Match: A0A0A0KP79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G532450 PE=3 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 4.7e-137
Identity = 255/282 (90.43%), Postives = 264/282 (93.62%), Query Frame = 1


Query: 1   MLRRRLCYLLSSSFASVRTKPPPAFAINQAVSRPFLEFQRNPSLDRSVGFPLSGNVLGFR 60
           MLRRRLC LLSSS ASV TKPPPA  INQA+SRPFLEFQ+NP LDR VG   SGN+ GFR
Sbjct: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60

Query: 61  AYSILSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRR 120
           A+S+LSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQ+ARGSGKLGFEGGQTPLRR
Sbjct: 61  AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQI+DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 181 GRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFQALLKPEWFEKKGRLLP 240
           GRGAE IKWPIHLEVSRVTVRAK AVEAAGGTVRRVYYNKLG +ALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFWV--EDGGDAASSL 281
           RAARPPPKQQDKVDSIGRLPAPTKPIPF V  EDGG AAS+L
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNL 282

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BLAST of CmaCh04G018900 vs. TrEMBL
Match: M5VMS3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008724mg PE=3 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 1.9e-114
Identity = 224/282 (79.43%), Postives = 245/282 (86.88%), Query Frame = 1


Query: 1   MLRRRLCYLLSSSF--ASVRTKPPPAFAINQAVSRPFLEFQR-NPSLDRSVGFPLSGNVL 60
           MLRRR+  LLS++   +S+RTKP  + +     S  FL+    NPS+  + GF       
Sbjct: 41  MLRRRVTSLLSTTIRSSSIRTKPTLSASPISFQSLHFLQCPNPNPSISNAKGFGFQPE-- 100

Query: 61  GFRAYSILSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP 120
           G RAYS+LSLNDLR KVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP
Sbjct: 101 GMRAYSLLSLNDLRGKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP 160

Query: 121 LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGV 180
           LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQI+DGV
Sbjct: 161 LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIKDGV 220

Query: 181 RLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFQALLKPEWFEKKGR 240
           RLMGRGAEQI+WPIH EVSRVTVRAK AVEAAGG+VRRVYYNKLGF+ALLKPEWFEKKGR
Sbjct: 221 RLMGRGAEQIQWPIHFEVSRVTVRAKEAVEAAGGSVRRVYYNKLGFRALLKPEWFEKKGR 280

Query: 241 LLPRAARPPPKQQDKVDSIGRLPAPTKPIPFWVEDGGDAASS 280
           LLP+AARPPPKQ+DKVDSIGRLPAPTKPIPF+ E+   ++SS
Sbjct: 281 LLPKAARPPPKQKDKVDSIGRLPAPTKPIPFFTEEEVASSSS 320

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BLAST of CmaCh04G018900 vs. TrEMBL
Match: W9R8K8_9ROSA (50S ribosomal protein L15 OS=Morus notabilis GN=L484_012191 PE=3 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 1.8e-112
Identity = 223/283 (78.80%), Postives = 244/283 (86.22%), Query Frame = 1


Query: 1   MLRRRLCYLLSSS-FASVRTKPPPAFAINQAVSRPFLEFQR-NPSLDRSVG-FPLSGNVL 60
           MLRRR+C +LSSS F ++  +P P   I Q++   FL+    N  L+   G F L     
Sbjct: 1   MLRRRICSILSSSIFNAITPRPLP---IQQSLR--FLQCPNPNSKLNNGGGEFGLWFGFG 60

Query: 61  GFRAYSILSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP 120
           GFRAYS+LSLNDLR  VPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP
Sbjct: 61  GFRAYSLLSLNDLRGNVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP 120

Query: 121 LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGV 180
           LRRR PKRGFKNPFSLTFQPVGLGKIAKLIN GKIDS ELITMKTLKDT AIGKQI+DGV
Sbjct: 121 LRRRFPKRGFKNPFSLTFQPVGLGKIAKLINEGKIDSHELITMKTLKDTEAIGKQIKDGV 180

Query: 181 RLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFQALLKPEWFEKKGR 240
           RLMGRGA+QIKWPIHLEVSRVTVRAKAAVEAAGG+VR+VYYNKLGF+ALLKPEWFEKKGR
Sbjct: 181 RLMGRGADQIKWPIHLEVSRVTVRAKAAVEAAGGSVRKVYYNKLGFRALLKPEWFEKKGR 240

Query: 241 LLPRAARPPPKQQDKVDSIGRLPAPTKPIPFWVEDGGDAASSL 281
           LLP+AARPPPKQ+DKVDSIGRLPAPTKPIPF++E+   A+ SL
Sbjct: 241 LLPKAARPPPKQRDKVDSIGRLPAPTKPIPFFIEEKEPASGSL 278

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BLAST of CmaCh04G018900 vs. TrEMBL
Match: A0A061E357_THECC (Ribosomal protein L18e/L15 superfamily protein OS=Theobroma cacao GN=TCM_007684 PE=3 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.2e-108
Identity = 212/274 (77.37%), Postives = 233/274 (85.04%), Query Frame = 1


Query: 1   MLRRRLCYLLSSSFASVRTKPPPAFAINQAVSRPFLEFQRNPSLDRSVGFPLSGNVL--G 60
           M+RRRL  ++S+S   ++TKP        +   P L F    SL  S     +G+    G
Sbjct: 1   MIRRRLSPIISASSHFLKTKPI-------SNPSPILHFHSFQSLQCSNPVIKNGSFWFQG 60

Query: 61  FRAYSILSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPL 120
            RAYS+LSLNDL+DKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARG+GKLGFEGGQTP+
Sbjct: 61  IRAYSLLSLNDLKDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGNGKLGFEGGQTPM 120

Query: 121 RRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVR 180
           RRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDS ELITMKTLKD GAIGKQI+DGVR
Sbjct: 121 RRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSHELITMKTLKDAGAIGKQIEDGVR 180

Query: 181 LMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFQALLKPEWFEKKGRL 240
           LMGRGAEQIKWPIHLEVSRVTVRAK AVEAAGG+VRRV+YNKLG +ALLKPEWFEKKGRL
Sbjct: 181 LMGRGAEQIKWPIHLEVSRVTVRAKEAVEAAGGSVRRVHYNKLGLRALLKPEWFEKKGRL 240

Query: 241 LPRAARPPPKQQDKVDSIGRLPAPTKPIPFWVED 273
           LP+ ARPPPK +DKVDSIGRLPAPTKPIPF+ E+
Sbjct: 241 LPKPARPPPKLKDKVDSIGRLPAPTKPIPFFTEE 267

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BLAST of CmaCh04G018900 vs. TrEMBL
Match: A0A0B2SX66_GLYSO (50S ribosomal protein L15 OS=Glycine soja GN=glysoja_019361 PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 2.3e-107
Identity = 210/275 (76.36%), Postives = 228/275 (82.91%), Query Frame = 1


Query: 1   MLRRRLCYLLSSSFASVRTKPPPAFAINQAVSRPFLEFQRNPSLDRSVGFPLSGNVLGFR 60
           MLRRRL  +LS+S         P        S PF + + +PS  R +      +  GFR
Sbjct: 1   MLRRRLS-VLSTSIIRRSNHSKPILRYPSIQSHPF-QLRHSPSAYRIISPNAFPDFQGFR 60

Query: 61  AYSILSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRR 120
           AYS+LSLNDLRDKVPRKQ TRKGRGIGSGKGKTAGRGHKGQ+AR   KLGFEGGQTPLRR
Sbjct: 61  AYSLLSLNDLRDKVPRKQPTRKGRGIGSGKGKTAGRGHKGQRARKGIKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLM 180
           RLPKRGFKNPFSLTFQP+GLGKIAK INAGKIDSSELITMKTLKD G +GKQ++DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPIGLGKIAKFINAGKIDSSELITMKTLKDAGVLGKQMKDGVRLM 180

Query: 181 GRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFQALLKPEWFEKKGRLLP 240
           GRG+EQIKWPIHLEVSRVTVRAK AVEAAGG+VRRVYYNKLG +AL+KPEWFEKKGRLLP
Sbjct: 181 GRGSEQIKWPIHLEVSRVTVRAKEAVEAAGGSVRRVYYNKLGLKALVKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFWVEDGGD 276
           RAARPPPKQ+DKVDSIGRLPAPTKPIPF VE   D
Sbjct: 241 RAARPPPKQKDKVDSIGRLPAPTKPIPFLVEASKD 273

[Close]

BLAST of CmaCh04G018900 vs. TAIR10
Match: AT5G64670.1 (AT5G64670.1 Ribosomal protein L18e/L15 superfamily protein)

HSP 1 Score: 382.1 bits (980), Expect = 3.0e-106
Identity = 206/281 (73.31%), Postives = 225/281 (80.07%), Query Frame = 1


Query: 1   MLRRRLCYLLSSSF--ASVRTKPPPAFAINQAVSRPFLEFQRNP-------SLDRSVGFP 60
           MLRRRL  ++S+S   +S      P F I    S P L+ + +P       S  R++ F 
Sbjct: 1   MLRRRLLSIISTSLINSSFHQTAKPRFII----SSPLLQCRPSPISTQIPTSTSRALSFQ 60

Query: 61  LSGNVLGFRAYSILSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGF 120
                 G RAYS+LSLNDLRD VPRK KTRKGRGIGSGKGKTAGRGHKGQKARG+ K GF
Sbjct: 61  ------GIRAYSLLSLNDLRDNVPRKLKTRKGRGIGSGKGKTAGRGHKGQKARGTMKFGF 120

Query: 121 EGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGK 180
           EGGQTPLRRRLPKRGFKN F L FQPVGLGKIAKLINAGKIDS ELITMKTLKD GAIGK
Sbjct: 121 EGGQTPLRRRLPKRGFKNKFKLHFQPVGLGKIAKLINAGKIDSHELITMKTLKDVGAIGK 180

Query: 181 QIQDGVRLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFQALLKPEW 240
           QI+DGVRLMGRGA+ IKWP+H EVSRVTVRAK  VEAAGG+VRRVYYNKLG +ALLKPEW
Sbjct: 181 QIEDGVRLMGRGADDIKWPLHFEVSRVTVRAKEVVEAAGGSVRRVYYNKLGLRALLKPEW 240

Query: 241 FEKKGRLLPRAARPPPKQQDKVDSIGRLPAPTKPIPFWVED 273
           FEKKGRLLP+AARPPPKQQDKVDSIGRLPAP KPIPF+  +
Sbjct: 241 FEKKGRLLPKAARPPPKQQDKVDSIGRLPAPKKPIPFFAAE 271

[Close]

BLAST of CmaCh04G018900 vs. TAIR10
Match: AT3G25920.1 (AT3G25920.1 ribosomal protein L15)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-09
Identity = 51/144 (35.42%), Postives = 81/144 (56.25%), Query Frame = 1


Query: 76  RKQKTRKGRGIGSGKGKTAGRGHKGQKAR-GSGKL-GFEGGQTPLRRRLPK-RGFKNPFS 135
           RK++ RKGRGI +G+G + G G +GQK+R G G + GFEGGQT L RRLPK RG      
Sbjct: 93  RKKQKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMR 152

Query: 136 LTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAI---GKQIQDGVRLMGRGAEQIKW 195
            +  P  L    K I        + ++++TLK  G I   G++ +  ++++G G  ++  
Sbjct: 153 -SGLPKYLPVNIKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLKILGTG--ELSM 212

Query: 196 PIHLEVSRVTVRAKAAVEAAGGTV 214
            +  +    + +AK  +EA+G T+
Sbjct: 213 KLTFKARAFSTQAKEKLEASGCTL 233

[Close]

BLAST of CmaCh04G018900 vs. NCBI nr
Match: gi|659121261|ref|XP_008460571.1| (PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis melo])

HSP 1 Score: 501.9 bits (1291), Expect = 7.3e-139
Identity = 256/282 (90.78%), Postives = 266/282 (94.33%), Query Frame = 1


Query: 1   MLRRRLCYLLSSSFASVRTKPPPAFAINQAVSRPFLEFQRNPSLDRSVGFPLSGNVLGFR 60
           MLRR+LCYLLSSS ASVRTKPPPA  INQA+  PFLEFQ+NP LDR VG PLSGN+ GFR
Sbjct: 1   MLRRQLCYLLSSSLASVRTKPPPAIVINQALLHPFLEFQQNPCLDRCVGSPLSGNIFGFR 60

Query: 61  AYSILSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRR 120
           A+S+LSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQ+ARGSGKLGFEGGQTPLRR
Sbjct: 61  AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQI+DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 181 GRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFQALLKPEWFEKKGRLLP 240
           GRGAE IKWPIHLEVSRVTVRAK AVEAAGGTVRRVYYNKLG +ALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFWV--EDGGDAASSL 281
           RAARPPPKQQDKVDSIGRLPAPTKPIPF V  EDGG AAS+L
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNL 282

[Close]

BLAST of CmaCh04G018900 vs. NCBI nr
Match: gi|449450123|ref|XP_004142813.1| (PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis sativus])

HSP 1 Score: 495.4 bits (1274), Expect = 6.8e-137
Identity = 255/282 (90.43%), Postives = 264/282 (93.62%), Query Frame = 1


Query: 1   MLRRRLCYLLSSSFASVRTKPPPAFAINQAVSRPFLEFQRNPSLDRSVGFPLSGNVLGFR 60
           MLRRRLC LLSSS ASV TKPPPA  INQA+SRPFLEFQ+NP LDR VG   SGN+ GFR
Sbjct: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60

Query: 61  AYSILSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRR 120
           A+S+LSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQ+ARGSGKLGFEGGQTPLRR
Sbjct: 61  AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQI+DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 181 GRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFQALLKPEWFEKKGRLLP 240
           GRGAE IKWPIHLEVSRVTVRAK AVEAAGGTVRRVYYNKLG +ALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFWV--EDGGDAASSL 281
           RAARPPPKQQDKVDSIGRLPAPTKPIPF V  EDGG AAS+L
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNL 282

[Close]

BLAST of CmaCh04G018900 vs. NCBI nr
Match: gi|595797630|ref|XP_007201295.1| (hypothetical protein PRUPE_ppa008724mg [Prunus persica])

HSP 1 Score: 420.2 bits (1079), Expect = 2.8e-114
Identity = 224/282 (79.43%), Postives = 245/282 (86.88%), Query Frame = 1


Query: 1   MLRRRLCYLLSSSF--ASVRTKPPPAFAINQAVSRPFLEFQR-NPSLDRSVGFPLSGNVL 60
           MLRRR+  LLS++   +S+RTKP  + +     S  FL+    NPS+  + GF       
Sbjct: 41  MLRRRVTSLLSTTIRSSSIRTKPTLSASPISFQSLHFLQCPNPNPSISNAKGFGFQPE-- 100

Query: 61  GFRAYSILSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP 120
           G RAYS+LSLNDLR KVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP
Sbjct: 101 GMRAYSLLSLNDLRGKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP 160

Query: 121 LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGV 180
           LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQI+DGV
Sbjct: 161 LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIKDGV 220

Query: 181 RLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFQALLKPEWFEKKGR 240
           RLMGRGAEQI+WPIH EVSRVTVRAK AVEAAGG+VRRVYYNKLGF+ALLKPEWFEKKGR
Sbjct: 221 RLMGRGAEQIQWPIHFEVSRVTVRAKEAVEAAGGSVRRVYYNKLGFRALLKPEWFEKKGR 280

Query: 241 LLPRAARPPPKQQDKVDSIGRLPAPTKPIPFWVEDGGDAASS 280
           LLP+AARPPPKQ+DKVDSIGRLPAPTKPIPF+ E+   ++SS
Sbjct: 281 LLPKAARPPPKQKDKVDSIGRLPAPTKPIPFFTEEEVASSSS 320

[Close]

BLAST of CmaCh04G018900 vs. NCBI nr
Match: gi|694421823|ref|XP_009338744.1| (PREDICTED: 54S ribosomal protein L10, mitochondrial [Pyrus x bretschneideri])

HSP 1 Score: 418.7 bits (1075), Expect = 8.1e-114
Identity = 222/278 (79.86%), Postives = 237/278 (85.25%), Query Frame = 1


Query: 1   MLRRRLCYLLSSSF--ASVRTKPPPAFAINQAVSRPFLEF----QRNPSLDRSVGFPLSG 60
           MLRRRL  LLS++   +S+RTKPP     +  +    L F      NPS +   GF   G
Sbjct: 1   MLRRRLPSLLSTTIFTSSIRTKPPLTLPTHSPIPSQSLHFLPCLNPNPSFNNDKGFGFQG 60

Query: 61  NVLGFRAYSILSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGG 120
                RAYS+LSLNDLR KVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGG
Sbjct: 61  ----VRAYSLLSLNDLRGKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGG 120

Query: 121 QTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQ 180
           QTPLRRRLPKRGF NPFSLTFQPVGLGKIA LINAGKIDSSELITMKTLKDTGAIGKQI+
Sbjct: 121 QTPLRRRLPKRGFNNPFSLTFQPVGLGKIATLINAGKIDSSELITMKTLKDTGAIGKQIK 180

Query: 181 DGVRLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFQALLKPEWFEK 240
           DGVRLMGRGAEQI+WPIHLEVSRVTVRA+ AVEAAGG+VRRVYYNKLGF+ALLKPEWFEK
Sbjct: 181 DGVRLMGRGAEQIQWPIHLEVSRVTVRAREAVEAAGGSVRRVYYNKLGFRALLKPEWFEK 240

Query: 241 KGRLLPRAARPPPKQQDKVDSIGRLPAPTKPIPFWVED 273
           KGRLLP+AARPPPKQ+DKVDSIGRLPAPTKPIPF  ED
Sbjct: 241 KGRLLPKAARPPPKQKDKVDSIGRLPAPTKPIPFLTED 274

[Close]

BLAST of CmaCh04G018900 vs. NCBI nr
Match: gi|1009156926|ref|XP_015896497.1| (PREDICTED: 50S ribosomal protein L15-like [Ziziphus jujuba])

HSP 1 Score: 417.5 bits (1072), Expect = 1.8e-113
Identity = 221/272 (81.25%), Postives = 236/272 (86.76%), Query Frame = 1


Query: 1   MLRRRLCYLLSSSFASVRTKPPPAFAINQAVSRPFLEFQRNPSLDRSVGFPLSGNVLGFR 60
           MLRRRL  LLS++  S   +  P FA      RP    Q +     + GF   G++ G R
Sbjct: 1   MLRRRLGSLLSTAILSNAGRTKPFFAAPSIPVRPIQVLQCHYYRKENGGF---GSLGGIR 60

Query: 61  AYSILSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRR 120
           AYS+LSLNDLR K+PRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRR
Sbjct: 61  AYSLLSLNDLRPKLPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQI+DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIKDGVRLM 180

Query: 181 GRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFQALLKPEWFEKKGRLLP 240
           GRGAEQIKWPIHLEVSRVTVRAK AVEAAGG+VRRVYYNKLG +ALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEQIKWPIHLEVSRVTVRAKEAVEAAGGSVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFWVED 273
           +AARPPPKQ+DKVDSIGRLPAPTKPIPF VE+
Sbjct: 241 KAARPPPKQRDKVDSIGRLPAPTKPIPFLVEE 269

The following BLAST results are available for this feature:

BLAST of CmaCh04G018900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RL15_GLUDA	6.1e-29	51.97	50S ribosomal protein L15 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037...	[more]
RL15_XANP2	8.0e-29	52.32	50S ribosomal protein L15 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / ...	[more]
RL15_BRASO	1.4e-28	50.00	50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain ORS278) GN=rplO PE=3 SV=...	[more]
RL15_RHORT	3.0e-28	50.99	50S ribosomal protein L15 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1....	[more]
RL15_BRASB	4.0e-28	49.34	50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) G...	[more]

BLAST of CmaCh04G018900 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KP79_CUCSA	4.7e-137	90.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G532450 PE=3 SV=1	[more]
M5VMS3_PRUPE	1.9e-114	79.43	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008724mg PE=3 SV=1	[more]
W9R8K8_9ROSA	1.8e-112	78.80	50S ribosomal protein L15 OS=Morus notabilis GN=L484_012191 PE=3 SV=1	[more]
A0A061E357_THECC	1.2e-108	77.37	Ribosomal protein L18e/L15 superfamily protein OS=Theobroma cacao GN=TCM_007684 ...	[more]
A0A0B2SX66_GLYSO	2.3e-107	76.36	50S ribosomal protein L15 OS=Glycine soja GN=glysoja_019361 PE=3 SV=1	[more]

BLAST of CmaCh04G018900 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64670.1	3.0e-106	73.31	Ribosomal protein L18e/L15 superfamily protein	[more]
AT3G25920.1	1.5e-09	35.42	ribosomal protein L15	[more]

BLAST of CmaCh04G018900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121261\|ref\|XP_008460571.1\|	7.3e-139	90.78	PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis melo]	[more]
gi\|449450123\|ref\|XP_004142813.1\|	6.8e-137	90.43	PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis sativus]	[more]
gi\|595797630\|ref\|XP_007201295.1\|	2.8e-114	79.43	hypothetical protein PRUPE_ppa008724mg [Prunus persica]	[more]
gi\|694421823\|ref\|XP_009338744.1\|	8.1e-114	79.86	PREDICTED: 54S ribosomal protein L10, mitochondrial [Pyrus x bretschneideri]	[more]
gi\|1009156926\|ref\|XP_015896497.1\|	1.8e-113	81.25	PREDICTED: 50S ribosomal protein L15-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005749	Ribosomal_L15_bac-type
IPR021131	Ribosomal_L18e/L15P

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Cellular Component**
Term	Definition
GO:0015934	large ribosomal subunit

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G018900.1	CmaCh04G018900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005749	Ribosomal protein L15, bacterial-type	PANTHER	PTHR12934	50S RIBOSOMAL PROTEIN L15	coord: 59..271 score: 2.6E
IPR005749	Ribosomal protein L15, bacterial-type	TIGRFAMs	TIGR01071	TIGR01071	coord: 67..213 score: 1.3
IPR021131	Ribosomal protein L18e/L15P	PFAM	PF00828	Ribosomal_L27A	coord: 90..213 score: 4.9
IPR021131	Ribosomal protein L18e/L15P	unknown	SSF52080	Ribosomal proteins L15p and L18e	coord: 75..213 score: 6.8
None	No IPR available	GENE3D	G3DSA:3.100.10.10		coord: 95..214 score: 2.3
None	No IPR available	PANTHER	PTHR12934:SF12	39S RIBOSOMAL PROTEIN L15, MITOCHONDRIAL	coord: 59..271 score: 2.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G018900	Cucsa.011740	Cucumber (Gy14) v1	cgycmaB0545
CmaCh04G018900	Cla001875	Watermelon (97103) v1	cmawmB739
CmaCh04G018900	Csa5G532450	Cucumber (Chinese Long) v2	cmacuB759
CmaCh04G018900	MELO3C022914	Melon (DHL92) v3.5.1	cmameB646
CmaCh04G018900	CSPI05G18790	Wild cucumber (PI 183967)	cmacpiB766
CmaCh04G018900	CmoCh04G019940	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G018900	Lsi11G001070	Bottle gourd (USVL1VR-Ls)	cmalsiB635
CmaCh04G018900	Cp4.1LG01g17050	Cucurbita pepo (Zucchini)	cmacpeB725
CmaCh04G018900	MELO3C022914.2	Melon (DHL92) v3.6.1	cmamedB730
CmaCh04G018900	CsaV3_5G027610	Cucumber (Chinese Long) v3	cmacucB0898
CmaCh04G018900	Cla97C11G206400	Watermelon (97103) v2	cmawmbB726
CmaCh04G018900	Bhi07G000062	Wax gourd	cmawgoB0913
CmaCh04G018900	CsGy5G018320	Cucumber (Gy14) v2	cgybcmaB688
CmaCh04G018900	Carg26169	Silver-seed gourd	carcmaB0395

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G018900	Cucumber (Chinese Long) v2	cmacuB760
CmaCh04G018900	Watermelon (Charleston Gray)	cmawcgB622
CmaCh04G018900	Watermelon (Charleston Gray)	cmawcgB628
CmaCh04G018900	Watermelon (97103) v1	cmawmB745
CmaCh04G018900	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G018900	Cucumber (Gy14) v2	cgybcmaB691
CmaCh04G018900	Cucumber (Chinese Long) v3	cmacucB0903
CmaCh04G018900	Watermelon (97103) v2	cmawmbB734
CmaCh04G018900	Wax gourd	cmawgoB0876
CmaCh04G018900	Wax gourd	cmawgoB0904
CmaCh04G018900	Wild cucumber (PI 183967)	cmacpiB767