Cp4.1LG01g15020 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g15020
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTwo-component response regulator
LocationCp4.1LG01 : 7200609 .. 7202424 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTTTCAATTTCTCAATTATTTTATACTTTGACTATTTGGTTTTTTTTTTTTGGGTGGAAGAAAAAGAAGAAATCAAAGCAAAGCACCATCTTCCTTGCTTCTAGTTGAATTCAAACAAATCAAACCCTAAGAGATCCGCGAGATTGTGTAACAAAATCTGTCGGATCTGCCTTTCCAAACTGTCAAATTTTTCAAAGGATTTCGCCATATCCCATTCTAATCTTACGCCATGCCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCATTTATAAACCCTATCTCCTTCCTCTCCTTCTTCGCAATCCCCTTTCTGTACCTTCTTCTTCTTCTTCTTCTTCTTCCTCCAATTCCCATGGCCCTTGTCTCTTCTAATGCTCAATTCCATGTCTTGGCTGTCGATGACAGCCTTGTTGACAGGAAGCTGATTGAAAGGCTGCTCAAAACTTCCTCCTTCAATGGTACTCTGCCATTGAACCTTCTTCTCTCTCTTTCTCACTCTCTCTAGGGTTCTAAGAATGGCTTGAATTTTAGGCTCTAAACAGTTGGTTTGGTTTGGTTTGGTTTTTTTCTTTTCACAGTTACGGCTGTGGATTCTGGAAGCAAGGCTTTGGAGCTTCTGGGTTTGGTTAGAGAGAGAAATGGAAGCATCCATTCTCCTTTTCCCCCTGAAAATCATCATCATCAACATCATCAAGTTAAGGATTTCCAATTTGGATGTTTGTTTGTTGTTCTTTTGGGCATTGTTTTGATTTGTTTTGCTTTGATTGCAGGAGATTGAAGTTAATCTCATCATTACAGATTACTGTATGCCAGAAATGACAGGCTATGATCTTCTAAGAAAGATCAAGGCAAGTTTCTTCTTCTTTTCAAAACATAAGGCTTAGTTTTCTGGTTGAGTTCACTTACTTTCCAACCAATTTCAATCTGAAAAGGAAAATCCTATCTGGTTTTGCAGGAATCTGACTCACTTAAAGACATACCTGTTGTGATTATGTCCTCTGAGAATGTTCCAGCAAGAATCAACAGGTGAGGAGGGAAACAGCTAGAACAGGAACCATTTTGTTTCCAAGCAAATCCAAATCTGAAATGATAAACAACCAGTAAATTCATGTCAATCATGTCAATCTGAATTGGGTTTTGGTTATTTGTTTTGAATCAGATGTCTAGAAGAAGGAGCTGAGGAGTTTTTGCTGAAACCAGTGAAATTATCTGATGTCAACAAGCTTAAGCCTTTCATATGCAGAGGAAAAGCCAAGGAAATGGATTGCAACAATCTCAAGAGAAAGGAAATGGAACAGAGTCAATCATCTGAGAGAACAAGAGCAAAATACAATGAACCTCTCTAAACTTCTGGCTTACATAATCAGTTCTTAGAGTTAAATGACCATTATTATGTACTTTCTAATGTTACAAGAGTGAATCATTTTGAATGTCTGAATGTACAAAGTTGATGAAAATTCGGATTTTTAGGCTTAGAAATCTCATTATTTTGTAGTTTAGATATCTGTACTCATGATTCGATCTCTACCAAAACAAACAAACAAAATAAAGGCATACAATCTTTTGTCTTTTAATTTTCCAATTTTGGCACTGAGCCACTAATAAGATTGCTGAATGAATTTGGTCAAGATTTGCTTGTTTCCAAATTCTCCACGAAACTGCTTGTCAATCTTGGAAGAATTCCAGAGGAGTCATAATGGGTAAGTTTGAGATTTCATATCTCAACCATGAAAAAAGAAAAAGAAGAGTTTTCAAACTTTCGAAAATCTTGACAGAAAATTAAATGTTCATGCTAATACG

mRNA sequence

CTTTTTTCAATTTCTCAATTATTTTATACTTTGACTATTTGGTTTTTTTTTTTTGGGTGGAAGAAAAAGAAGAAATCAAAGCAAAGCACCATCTTCCTTGCTTCTAGTTGAATTCAAACAAATCAAACCCTAAGAGATCCGCGAGATTGTGTAACAAAATCTGTCGGATCTGCCTTTCCAAACTGTCAAATTTTTCAAAGGATTTCGCCATATCCCATTCTAATCTTACGCCATGCCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCATTTATAAACCCTATCTCCTTCCTCTCCTTCTTCGCAATCCCCTTTCTGTACCTTCTTCTTCTTCTTCTTCTTCTTCCTCCAATTCCCATGGCCCTTGTCTCTTCTAATGCTCAATTCCATGTCTTGGCTGTCGATGACAGCCTTGTTGACAGGAAGCTGATTGAAAGGCTGCTCAAAACTTCCTCCTTCAATGTTACGGCTGTGGATTCTGGAAGCAAGGCTTTGGAGCTTCTGGGTTTGGTTAGAGAGAGAAATGGAAGCATCCATTCTCCTTTTCCCCCTGAAAATCATCATCATCAACATCATCAAGAGATTGAAGTTAATCTCATCATTACAGATTACTGTATGCCAGAAATGACAGGCTATGATCTTCTAAGAAAGATCAAGGCAAGAAAATCCTATCTGGTTTTGCAGGAATCTGACTCACTTAAAGACATACCTGTTGTGATTATGTCCTCTGAGAATGTTCCAGCAAGAATCAACAGATGTCTAGAAGAAGGAGCTGAGGAGTTTTTGCTGAAACCAGTGAAATTATCTGATGTCAACAAGCTTAAGCCTTTCATATGCAGAGGAAAAGCCAAGGAAATGGATTGCAACAATCTCAAGAGAAAGGAAATGGAACAGAGTCAATCATCTGAGAGAACAAGAGCAAAATACAATGAACCTCTCTAAACTTCTGGCTTACATAATCAGTTCTTAGAGTTAAATGACCATTATTATGTACTTTCTAATGTTACAAGAGTGAATCATTTTGAATGTCTGAATGTACAAAGTTGATGAAAATTCGGATTTTTAGGCTTAGAAATCTCATTATTTTGTAGTTTAGATATCTGTACTCATGATTCGATCTCTACCAAAACAAACAAACAAAATAAAGGCATACAATCTTTTGTCTTTTAATTTTCCAATTTTGGCACTGAGCCACTAATAAGATTGCTGAATGAATTTGGTCAAGATTTGCTTGTTTCCAAATTCTCCACGAAACTGCTTGTCAATCTTGGAAGAATTCCAGAGGAGTCATAATGGGTAAGTTTGAGATTTCATATCTCAACCATGAAAAAAGAAAAAGAAGAGTTTTCAAACTTTCGAAAATCTTGACAGAAAATTAAATGTTCATGCTAATACG

Coding sequence (CDS)

ATGGCCCTTGTCTCTTCTAATGCTCAATTCCATGTCTTGGCTGTCGATGACAGCCTTGTTGACAGGAAGCTGATTGAAAGGCTGCTCAAAACTTCCTCCTTCAATGTTACGGCTGTGGATTCTGGAAGCAAGGCTTTGGAGCTTCTGGGTTTGGTTAGAGAGAGAAATGGAAGCATCCATTCTCCTTTTCCCCCTGAAAATCATCATCATCAACATCATCAAGAGATTGAAGTTAATCTCATCATTACAGATTACTGTATGCCAGAAATGACAGGCTATGATCTTCTAAGAAAGATCAAGGCAAGAAAATCCTATCTGGTTTTGCAGGAATCTGACTCACTTAAAGACATACCTGTTGTGATTATGTCCTCTGAGAATGTTCCAGCAAGAATCAACAGATGTCTAGAAGAAGGAGCTGAGGAGTTTTTGCTGAAACCAGTGAAATTATCTGATGTCAACAAGCTTAAGCCTTTCATATGCAGAGGAAAAGCCAAGGAAATGGATTGCAACAATCTCAAGAGAAAGGAAATGGAACAGAGTCAATCATCTGAGAGAACAAGAGCAAAATACAATGAACCTCTCTAA

Protein sequence

MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPFPPENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQSSERTRAKYNEPL
BLAST of Cp4.1LG01g15020 vs. Swiss-Prot
Match: ORR4_ORYSJ (Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica GN=RR4 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.8e-49
Identity = 106/163 (65.03%), Postives = 123/163 (75.46%), Query Frame = 1

Query: 1   MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH 60
           M +V + ++FHVLAVDDSL+DRKLIE LLK SS+ VT VDSGSKALELLGL  E + S  
Sbjct: 1   MTVVDAESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSS 60

Query: 61  SPFPPENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVV 120
           SP    +     HQEI+VNLIITDYCMP MTGYDLL+++K          S SLKDIPVV
Sbjct: 61  SP----SSSSPDHQEIDVNLIITDYCMPGMTGYDLLKRVKG---------SSSLKDIPVV 120

Query: 121 IMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGK 164
           IMSSENVPARINRCLE+GAEEF LKPVKL+D+ KLK  + + K
Sbjct: 121 IMSSENVPARINRCLEDGAEEFFLKPVKLADMKKLKSHLLKRK 150

BLAST of Cp4.1LG01g15020 vs. Swiss-Prot
Match: ORR4_ORYSI (Two-component response regulator ORR4 OS=Oryza sativa subsp. indica GN=RR4 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.8e-49
Identity = 106/163 (65.03%), Postives = 123/163 (75.46%), Query Frame = 1

Query: 1   MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH 60
           M +V + ++FHVLAVDDSL+DRKLIE LLK SS+ VT VDSGSKALELLGL  E + S  
Sbjct: 1   MTVVDAESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSS 60

Query: 61  SPFPPENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVV 120
           SP    +     HQEI+VNLIITDYCMP MTGYDLL+++K          S SLKDIPVV
Sbjct: 61  SP----SSSSPDHQEIDVNLIITDYCMPGMTGYDLLKRVKG---------SSSLKDIPVV 120

Query: 121 IMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGK 164
           IMSSENVPARINRCLE+GAEEF LKPVKL+D+ KLK  + + K
Sbjct: 121 IMSSENVPARINRCLEDGAEEFFLKPVKLADMKKLKSHLLKRK 150

BLAST of Cp4.1LG01g15020 vs. Swiss-Prot
Match: ORR10_ORYSI (Two-component response regulator ORR10 OS=Oryza sativa subsp. indica GN=RR10 PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.4e-47
Identity = 111/196 (56.63%), Postives = 128/196 (65.31%), Query Frame = 1

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPF 63
           V+  A FHVLAVDDSL DRKLIERLLKTSSF VT VDSGSKALE LGL    +  I +  
Sbjct: 3   VAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPIST-- 62

Query: 64  PPENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMS 123
                     QE+ VNLIITDYCMP MTGYDLL+KIK         ES  L+DIPVVIMS
Sbjct: 63  ------QSDQQEVGVNLIITDYCMPGMTGYDLLKKIK---------ESSYLRDIPVVIMS 122

Query: 124 SENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKE-----------MDCNNL 183
           S+N+P+RINRCLEEGA+EF LKPV+LSD++KLKP I + + KE            + NN 
Sbjct: 123 SDNIPSRINRCLEEGADEFFLKPVRLSDMSKLKPHILKSRCKEHYQQEQHLQSNSESNNS 181

Query: 184 KRKEMEQSQSSERTRA 189
                E S SS  T +
Sbjct: 183 SNPTSENSSSSTSTNS 181

BLAST of Cp4.1LG01g15020 vs. Swiss-Prot
Match: ORR10_ORYSJ (Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica GN=RR10 PE=2 SV=2)

HSP 1 Score: 189.5 bits (480), Expect = 3.4e-47
Identity = 111/196 (56.63%), Postives = 128/196 (65.31%), Query Frame = 1

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPF 63
           V+  A FHVLAVDDSL DRKLIERLLKTSSF VT VDSGSKALE LGL    +  I +  
Sbjct: 3   VAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPIST-- 62

Query: 64  PPENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMS 123
                     QE+ VNLIITDYCMP MTGYDLL+KIK         ES  L+DIPVVIMS
Sbjct: 63  ------QSDQQEVGVNLIITDYCMPGMTGYDLLKKIK---------ESSYLRDIPVVIMS 122

Query: 124 SENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKE-----------MDCNNL 183
           S+N+P+RINRCLEEGA+EF LKPV+LSD++KLKP I + + KE            + NN 
Sbjct: 123 SDNIPSRINRCLEEGADEFFLKPVRLSDMSKLKPHILKSRCKEHYQQEQHLQSNSESNNS 181

Query: 184 KRKEMEQSQSSERTRA 189
                E S SS  T +
Sbjct: 183 SNPTSENSSSSTSTNS 181

BLAST of Cp4.1LG01g15020 vs. Swiss-Prot
Match: ORR9_ORYSJ (Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica GN=RR9 PE=2 SV=2)

HSP 1 Score: 189.1 bits (479), Expect = 4.5e-47
Identity = 110/191 (57.59%), Postives = 126/191 (65.97%), Query Frame = 1

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPF 63
           V+  A FHVLAVDDSL DRKLIERLLKTSSF VT VDSGSKALE LGL    +  I +  
Sbjct: 3   VAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPIST-- 62

Query: 64  PPENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMS 123
                     QE+ VNLIITDYCMP MTGYDLL+KIK         ES  L+DIPVVIMS
Sbjct: 63  ------QSDQQEVAVNLIITDYCMPGMTGYDLLKKIK---------ESSYLRDIPVVIMS 122

Query: 124 SENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKE-----------MDCNNL 183
           S+N+P+RINRCLEEGA+EF LKPV+LSD++KLKP I + + KE            + NN 
Sbjct: 123 SDNIPSRINRCLEEGADEFFLKPVRLSDMSKLKPHILKSRCKEHYQQEQNLQSNSESNNS 176

BLAST of Cp4.1LG01g15020 vs. TrEMBL
Match: A0A0A0KV44_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623800 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 5.3e-71
Identity = 152/181 (83.98%), Postives = 161/181 (88.95%), Query Frame = 1

Query: 1   MALVSSNA-QFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSI 60
           M+L+SS+  +FHVLAVDDSLVDRKLIERLLKTSSFNVT VDSGSKALELLGLVRERNG+ 
Sbjct: 1   MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTN 60

Query: 61  H-SPFPPENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIP 120
           H SP  PE+ H QHHQEIEVNLIITDYCMPEMTG+DLLRKIK         ESDSLKDIP
Sbjct: 61  HSSPISPED-HRQHHQEIEVNLIITDYCMPEMTGFDLLRKIK---------ESDSLKDIP 120

Query: 121 VVIMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG-KAKEMDCNNLKRKEM 179
           VVIMSSENVP+RINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG KAKEMD N+LKRKEM
Sbjct: 121 VVIMSSENVPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEM 171

BLAST of Cp4.1LG01g15020 vs. TrEMBL
Match: M5X712_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025335mg PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 7.9e-59
Identity = 130/192 (67.71%), Postives = 150/192 (78.12%), Query Frame = 1

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPF 63
           +S+ AQFHVLAVDDS++DRKLIERLLKTSS+ VTAVDSGSKALE LGL  +++  I +  
Sbjct: 3   LSAEAQFHVLAVDDSVIDRKLIERLLKTSSYQVTAVDSGSKALEFLGL-HDQDDQIDADI 62

Query: 64  P---PENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVV 123
           P   P+NH     Q++EVNLIITDYCMP MTGYDLLRKIK         ES  LKDIPVV
Sbjct: 63  PSLSPDNHQ----QDVEVNLIITDYCMPGMTGYDLLRKIK---------ESHVLKDIPVV 122

Query: 124 IMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQS 183
           IMSSEN P+RINRCLEEGAEEF LKPV+LSDVNKLKP + +G+A E   NN KRK MEQ+
Sbjct: 123 IMSSENEPSRINRCLEEGAEEFFLKPVQLSDVNKLKPHMLKGRAMEDQSNNNKRKVMEQT 180

Query: 184 QSSERTRAKYNE 193
           Q+ ERTR KYN+
Sbjct: 183 QTPERTRTKYND 180

BLAST of Cp4.1LG01g15020 vs. TrEMBL
Match: A0A067KWD7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24525 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.9e-58
Identity = 129/189 (68.25%), Postives = 150/189 (79.37%), Query Frame = 1

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRER--NGSIHS 63
           +++  QFHVLAVDDSL+DRKLIERLLKTSS++VTAVDSGSKALE LGL  E   + ++ S
Sbjct: 3   MATEPQFHVLAVDDSLIDRKLIERLLKTSSYHVTAVDSGSKALEFLGLNEEEQIDSNLTS 62

Query: 64  PFPPENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVI 123
             PP +HH    Q++EVNLIITDYCMP MTGYDLLRKIK         ES SLKDIPVVI
Sbjct: 63  VSPPGDHH----QDVEVNLIITDYCMPGMTGYDLLRKIK---------ESKSLKDIPVVI 122

Query: 124 MSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQ 183
           MSSENVP+RINRCLEEGAEEF LKPV+LSDVNKLKP + +GKAKE + +N KRK M++  
Sbjct: 123 MSSENVPSRINRCLEEGAEEFFLKPVQLSDVNKLKPHLMKGKAKEDEPSN-KRKGMDEIH 177

Query: 184 SSERTRAKY 191
           S ERTR +Y
Sbjct: 183 SPERTRTRY 177

BLAST of Cp4.1LG01g15020 vs. TrEMBL
Match: B9RGB1_RICCO (Two-component response regulator ARR8, putative OS=Ricinus communis GN=RCOM_1452640 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 7.4e-57
Identity = 129/197 (65.48%), Postives = 150/197 (76.14%), Query Frame = 1

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRE--------- 63
           +++++QFHVLAVDDSL+DRKLIERLLKTSSF+VTAVDSGSKALE LGL  E         
Sbjct: 3   MAADSQFHVLAVDDSLIDRKLIERLLKTSSFHVTAVDSGSKALEFLGLNEEEEEEEEEEE 62

Query: 64  -RNGSIHSPFPPENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDS 123
            R+ S  S  P +    +HHQ+++VNLIITDYCMP MTGYDLLRKIK         ES S
Sbjct: 63  RRDSSPISVCPDD----EHHQDLQVNLIITDYCMPGMTGYDLLRKIK---------ESKS 122

Query: 124 LKDIPVVIMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLK 183
            KDIPVVIMSSENVP+RINRCLEEGAEEF LKPV+LSDVNKLKP + +GK +E + NN K
Sbjct: 123 FKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVNKLKPHMMKGKTRENEPNN-K 182

Query: 184 RKEMEQSQSSERTRAKY 191
           RK ME+  S ERTR +Y
Sbjct: 183 RKGMEEIHSPERTRTRY 185

BLAST of Cp4.1LG01g15020 vs. TrEMBL
Match: A0A061FRZ9_THECC (Two-component response regulator ARR8 OS=Theobroma cacao GN=TCM_045246 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.3e-56
Identity = 122/191 (63.87%), Postives = 145/191 (75.92%), Query Frame = 1

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPF 63
           +++ AQFHVLAVDDSL+DRKLIERLLKTSS++VTAVDSGSKALE LGL         +P 
Sbjct: 3   MATEAQFHVLAVDDSLIDRKLIERLLKTSSYHVTAVDSGSKALEFLGLNGSHEDGQRNPS 62

Query: 64  PPENH--HHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVI 123
           P        QH Q++EVNLIITDYCMP MTGYDLLR+IK          S S KDIPVVI
Sbjct: 63  PASVSLDEDQHQQDVEVNLIITDYCMPGMTGYDLLRRIKG---------SSSFKDIPVVI 122

Query: 124 MSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQ 183
           MSSEN+P+RINRCLE+GAEEF LKPV+LSDVNKL+P + +G++KEM  N  KRK ME+  
Sbjct: 123 MSSENIPSRINRCLEDGAEEFFLKPVQLSDVNKLRPHLMKGRSKEMQQNISKRKGMEEIL 182

Query: 184 SSERTRAKYNE 193
           + +RTR +YNE
Sbjct: 183 TPDRTRTRYNE 184

BLAST of Cp4.1LG01g15020 vs. TAIR10
Match: AT3G57040.1 (AT3G57040.1 response regulator 9)

HSP 1 Score: 188.7 bits (478), Expect = 3.3e-48
Identity = 108/183 (59.02%), Postives = 131/183 (71.58%), Query Frame = 1

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPF 63
           +++ +QFHVLAVDDSL DRKLIERLL+ SS  VT VDSGSKALE LGL +  + +  + F
Sbjct: 3   MAAESQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAF 62

Query: 64  P--PENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVI 123
              P NH     Q +EVNLIITDYCMP MTGYDLL+K+K         ES + +DIPVVI
Sbjct: 63  SKAPVNH-----QVVEVNLIITDYCMPGMTGYDLLKKVK---------ESSAFRDIPVVI 122

Query: 124 MSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQ 183
           MSSENVPARI+RCLEEGAEEF LKPV+L+D+NKLKP + + K K     N K +E+E + 
Sbjct: 123 MSSENVPARISRCLEEGAEEFFLKPVRLADLNKLKPHMMKTKLK-----NQKLEEIETTS 166

Query: 184 SSE 185
             E
Sbjct: 183 KVE 166

BLAST of Cp4.1LG01g15020 vs. TAIR10
Match: AT2G41310.1 (AT2G41310.1 response regulator 3)

HSP 1 Score: 181.8 bits (460), Expect = 4.0e-46
Identity = 114/234 (48.72%), Postives = 142/234 (60.68%), Query Frame = 1

Query: 3   LVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGL-VRERNGSIHS 62
           ++ + ++FHVLAVDDSL DRK+IERLL+ SS  VT VDSGSKALE LGL V + + +  S
Sbjct: 2   VMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALS 61

Query: 63  PFPPENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVI 122
             P      Q HQE+E+NLIITDYCMP MTGYDLL+K+K         ES + + IPVVI
Sbjct: 62  TSP------QIHQEVEINLIITDYCMPGMTGYDLLKKVK---------ESAAFRSIPVVI 121

Query: 123 MSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAK---------------- 182
           MSSENVPARI+RCLEEGAEEF LKPVKL+D+ KLKP + + K K                
Sbjct: 122 MSSENVPARISRCLEEGAEEFFLKPVKLADLTKLKPHMMKTKLKKESEKPVAIEEIVVSK 181

Query: 183 --------------------EMDCNNL-------KRKEMEQSQSSERTRAKYNE 193
                               E++   L       KRK ME+  S++R+R KYN+
Sbjct: 182 PEIEEEEEESSVIEILPLHQEIESEQLEPMLSSNKRKAMEEVVSTDRSRPKYND 220

BLAST of Cp4.1LG01g15020 vs. TAIR10
Match: AT1G74890.1 (AT1G74890.1 response regulator 15)

HSP 1 Score: 156.8 bits (395), Expect = 1.4e-38
Identity = 93/188 (49.47%), Postives = 125/188 (66.49%), Query Frame = 1

Query: 5   SSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPFP 64
           SS+ + HVLAVDDS VDRK+IERLLK S+  VT V+SG++AL+ LGL  + NGS      
Sbjct: 13  SSSPELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGD-NGS------ 72

Query: 65  PENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMSS 124
                    ++++VNLI+TDY MP +TGY+LL+KIK         ES +L++IPVVIMSS
Sbjct: 73  ------SGLKDLKVNLIVTDYSMPGLTGYELLKKIK---------ESSALREIPVVIMSS 132

Query: 125 ENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICR------GKAKEMDCNNLKRKEME 184
           EN+  RI +C+ EGAEEFLLKPVKL+DV +LK  I R      GK K++    + + +++
Sbjct: 133 ENIQPRIEQCMIEGAEEFLLKPVKLADVKRLKELIMRGGEAEEGKTKKLSPKRILQNDID 178

Query: 185 QSQSSERT 187
            S SS  T
Sbjct: 193 SSPSSSST 178

BLAST of Cp4.1LG01g15020 vs. TAIR10
Match: AT1G59940.1 (AT1G59940.1 response regulator 3)

HSP 1 Score: 156.0 bits (393), Expect = 2.4e-38
Identity = 87/153 (56.86%), Postives = 107/153 (69.93%), Query Frame = 1

Query: 9   QFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPFPPENH 68
           Q HVLAVDDSLVDR +IERLL+ +S  VTAVDSG +ALE LGL  ++             
Sbjct: 32  QVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAV---------- 91

Query: 69  HHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMSSENVP 128
                  ++V+LIITDYCMP MTGY+LL+KIK         ES S K++PVVIMSSENV 
Sbjct: 92  ---EFDRLKVDLIITDYCMPGMTGYELLKKIK---------ESTSFKEVPVVIMSSENVM 151

Query: 129 ARINRCLEEGAEEFLLKPVKLSDVNKLKPFICR 162
            RI+RCLEEGAE+FLLKPVKL+DV +L+ ++ R
Sbjct: 152 TRIDRCLEEGAEDFLLKPVKLADVKRLRSYLTR 162

BLAST of Cp4.1LG01g15020 vs. TAIR10
Match: AT1G19050.1 (AT1G19050.1 response regulator 7)

HSP 1 Score: 154.1 bits (388), Expect = 9.0e-38
Identity = 89/183 (48.63%), Postives = 122/183 (66.67%), Query Frame = 1

Query: 3   LVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSP 62
           L  +  + HVLAVDDS+VDRK+IERLL+ SS  VT V+SG++AL+ LGL   +  S    
Sbjct: 17  LTVTTPELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGAS---- 76

Query: 63  FPPENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIM 122
                    + ++++VNLI+TDY MP ++GYDLL+KIK         ES + +++PVVIM
Sbjct: 77  ---------NLKDLKVNLIVTDYSMPGLSGYDLLKKIK---------ESSAFREVPVVIM 136

Query: 123 SSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMD--CNNLKRKEMEQS 182
           SSEN+  RI  CL+EGAEEFLLKPVKL+DV ++K  I R +A+E     ++ KRK  E S
Sbjct: 137 SSENILPRIQECLKEGAEEFLLKPVKLADVKRIKQLIMRNEAEECKILSHSNKRKLQEDS 177

Query: 183 QSS 184
            +S
Sbjct: 197 DTS 177

BLAST of Cp4.1LG01g15020 vs. NCBI nr
Match: gi|659092213|ref|XP_008446956.1| (PREDICTED: two-component response regulator ARR9-like isoform X1 [Cucumis melo])

HSP 1 Score: 281.2 bits (718), Expect = 1.4e-72
Identity = 153/181 (84.53%), Postives = 161/181 (88.95%), Query Frame = 1

Query: 1   MALVSSNA-QFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSI 60
           M+L+SS+  +FHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNG+ 
Sbjct: 1   MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGTN 60

Query: 61  H-SPFPPENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIP 120
           H SP  PENH   HHQEIEVNLIITDYCMPEMTGYDLLRKIK         ESDSLKDIP
Sbjct: 61  HNSPISPENHRQHHHQEIEVNLIITDYCMPEMTGYDLLRKIK---------ESDSLKDIP 120

Query: 121 VVIMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG-KAKEMDCNNLKRKEM 179
           VVIMSSENVP+RINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG KAKE+D N+LKRKEM
Sbjct: 121 VVIMSSENVPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGTKAKEIDFNHLKRKEM 172

BLAST of Cp4.1LG01g15020 vs. NCBI nr
Match: gi|449449356|ref|XP_004142431.1| (PREDICTED: two-component response regulator ARR9-like [Cucumis sativus])

HSP 1 Score: 275.4 bits (703), Expect = 7.6e-71
Identity = 152/181 (83.98%), Postives = 161/181 (88.95%), Query Frame = 1

Query: 1   MALVSSNA-QFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSI 60
           M+L+SS+  +FHVLAVDDSLVDRKLIERLLKTSSFNVT VDSGSKALELLGLVRERNG+ 
Sbjct: 1   MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTN 60

Query: 61  H-SPFPPENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIP 120
           H SP  PE+ H QHHQEIEVNLIITDYCMPEMTG+DLLRKIK         ESDSLKDIP
Sbjct: 61  HSSPISPED-HRQHHQEIEVNLIITDYCMPEMTGFDLLRKIK---------ESDSLKDIP 120

Query: 121 VVIMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG-KAKEMDCNNLKRKEM 179
           VVIMSSENVP+RINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG KAKEMD N+LKRKEM
Sbjct: 121 VVIMSSENVPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEM 171

BLAST of Cp4.1LG01g15020 vs. NCBI nr
Match: gi|596041262|ref|XP_007220067.1| (hypothetical protein PRUPE_ppa025335mg [Prunus persica])

HSP 1 Score: 235.0 bits (598), Expect = 1.1e-58
Identity = 130/192 (67.71%), Postives = 150/192 (78.12%), Query Frame = 1

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPF 63
           +S+ AQFHVLAVDDS++DRKLIERLLKTSS+ VTAVDSGSKALE LGL  +++  I +  
Sbjct: 3   LSAEAQFHVLAVDDSVIDRKLIERLLKTSSYQVTAVDSGSKALEFLGL-HDQDDQIDADI 62

Query: 64  P---PENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVV 123
           P   P+NH     Q++EVNLIITDYCMP MTGYDLLRKIK         ES  LKDIPVV
Sbjct: 63  PSLSPDNHQ----QDVEVNLIITDYCMPGMTGYDLLRKIK---------ESHVLKDIPVV 122

Query: 124 IMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQS 183
           IMSSEN P+RINRCLEEGAEEF LKPV+LSDVNKLKP + +G+A E   NN KRK MEQ+
Sbjct: 123 IMSSENEPSRINRCLEEGAEEFFLKPVQLSDVNKLKPHMLKGRAMEDQSNNNKRKVMEQT 180

Query: 184 QSSERTRAKYNE 193
           Q+ ERTR KYN+
Sbjct: 183 QTPERTRTKYND 180

BLAST of Cp4.1LG01g15020 vs. NCBI nr
Match: gi|645283138|ref|XP_008245632.1| (PREDICTED: two-component response regulator ARR9-like [Prunus mume])

HSP 1 Score: 233.0 bits (593), Expect = 4.3e-58
Identity = 130/192 (67.71%), Postives = 150/192 (78.12%), Query Frame = 1

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPF 63
           +S+ AQFHVLAVDDS++DRKLIERLLKTSS+ VTAVDSGSKALE LGL  +++  I +  
Sbjct: 3   LSAEAQFHVLAVDDSVIDRKLIERLLKTSSYQVTAVDSGSKALEFLGL-HDQDDQIDADI 62

Query: 64  P---PENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVV 123
           P   PEN+H    Q++EVNLIITDYCMP MTGYDLLRKIK         ES  LKDIPVV
Sbjct: 63  PSLSPENNH----QDVEVNLIITDYCMPGMTGYDLLRKIK---------ESHVLKDIPVV 122

Query: 124 IMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQS 183
           IMSSEN P+RINRCLEEGAEEF LKPV+LSDVNKL+P + +GKA E   N  KRK MEQ+
Sbjct: 123 IMSSENEPSRINRCLEEGAEEFFLKPVQLSDVNKLRPHMLKGKAMEDQSNINKRKVMEQT 180

Query: 184 QSSERTRAKYNE 193
           Q+ ERTR KYN+
Sbjct: 183 QTPERTRTKYND 180

BLAST of Cp4.1LG01g15020 vs. NCBI nr
Match: gi|643733683|gb|KDP40526.1| (hypothetical protein JCGZ_24525 [Jatropha curcas])

HSP 1 Score: 232.6 bits (592), Expect = 5.7e-58
Identity = 129/189 (68.25%), Postives = 150/189 (79.37%), Query Frame = 1

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRER--NGSIHS 63
           +++  QFHVLAVDDSL+DRKLIERLLKTSS++VTAVDSGSKALE LGL  E   + ++ S
Sbjct: 3   MATEPQFHVLAVDDSLIDRKLIERLLKTSSYHVTAVDSGSKALEFLGLNEEEQIDSNLTS 62

Query: 64  PFPPENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVI 123
             PP +HH    Q++EVNLIITDYCMP MTGYDLLRKIK         ES SLKDIPVVI
Sbjct: 63  VSPPGDHH----QDVEVNLIITDYCMPGMTGYDLLRKIK---------ESKSLKDIPVVI 122

Query: 124 MSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQ 183
           MSSENVP+RINRCLEEGAEEF LKPV+LSDVNKLKP + +GKAKE + +N KRK M++  
Sbjct: 123 MSSENVPSRINRCLEEGAEEFFLKPVQLSDVNKLKPHLMKGKAKEDEPSN-KRKGMDEIH 177

Query: 184 SSERTRAKY 191
           S ERTR +Y
Sbjct: 183 SPERTRTRY 177

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ORR4_ORYSJ4.8e-4965.03Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica GN=RR4 PE=... [more]
ORR4_ORYSI4.8e-4965.03Two-component response regulator ORR4 OS=Oryza sativa subsp. indica GN=RR4 PE=2 ... [more]
ORR10_ORYSI3.4e-4756.63Two-component response regulator ORR10 OS=Oryza sativa subsp. indica GN=RR10 PE=... [more]
ORR10_ORYSJ3.4e-4756.63Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica GN=RR10 P... [more]
ORR9_ORYSJ4.5e-4757.59Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica GN=RR9 PE=... [more]
Match NameE-valueIdentityDescription
A0A0A0KV44_CUCSA5.3e-7183.98Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623800 PE=4 SV=1[more]
M5X712_PRUPE7.9e-5967.71Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025335mg PE=4 SV=1[more]
A0A067KWD7_JATCU3.9e-5868.25Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24525 PE=4 SV=1[more]
B9RGB1_RICCO7.4e-5765.48Two-component response regulator ARR8, putative OS=Ricinus communis GN=RCOM_1452... [more]
A0A061FRZ9_THECC1.3e-5663.87Two-component response regulator ARR8 OS=Theobroma cacao GN=TCM_045246 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G57040.13.3e-4859.02 response regulator 9[more]
AT2G41310.14.0e-4648.72 response regulator 3[more]
AT1G74890.11.4e-3849.47 response regulator 15[more]
AT1G59940.12.4e-3856.86 response regulator 3[more]
AT1G19050.19.0e-3848.63 response regulator 7[more]
Match NameE-valueIdentityDescription
gi|659092213|ref|XP_008446956.1|1.4e-7284.53PREDICTED: two-component response regulator ARR9-like isoform X1 [Cucumis melo][more]
gi|449449356|ref|XP_004142431.1|7.6e-7183.98PREDICTED: two-component response regulator ARR9-like [Cucumis sativus][more]
gi|596041262|ref|XP_007220067.1|1.1e-5867.71hypothetical protein PRUPE_ppa025335mg [Prunus persica][more]
gi|645283138|ref|XP_008245632.1|4.3e-5867.71PREDICTED: two-component response regulator ARR9-like [Prunus mume][more]
gi|643733683|gb|KDP40526.1|5.7e-5868.25hypothetical protein JCGZ_24525 [Jatropha curcas][more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000160phosphorelay signal transduction system
Vocabulary: INTERPRO
TermDefinition
IPR011006CheY-like_superfamily
IPR001789Sig_transdc_resp-reg_receiver
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000160 phosphorelay signal transduction system
cellular_component GO:0005622 intracellular
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g15020.1Cp4.1LG01g15020.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001789Signal transduction response regulator, receiver domainPFAMPF00072Response_regcoord: 12..152
score: 1.1
IPR001789Signal transduction response regulator, receiver domainSMARTSM00448REC_2coord: 10..156
score: 1.4
IPR001789Signal transduction response regulator, receiver domainPROFILEPS50110RESPONSE_REGULATORYcoord: 11..160
score: 32
IPR011006CheY-like superfamilyunknownSSF52172CheY-likecoord: 10..152
score: 1.97
NoneNo IPR availableGENE3DG3DSA:3.40.50.2300coord: 7..154
score: 4.1
NoneNo IPR availablePANTHERPTHR26402RESPONSE REGULATOR OF TWO-COMPONENT SYSTEMcoord: 74..192
score: 1.1E-90coord: 10..49
score: 1.1
NoneNo IPR availablePANTHERPTHR26402:SF574SUBFAMILY NOT NAMEDcoord: 74..192
score: 1.1E-90coord: 10..49
score: 1.1