CSPI05G27580 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G27580
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Two-component response regulator
Location	Chr5 : 26028979 .. 26030518 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCTTCCTCTTCTTTCTTTGATATATATTAATATAATGTCCCTTCTCTCTTCTGATCAGCCTCGCTTTCATGTTTTGGCTGTTGATGACAGCCTTGTTGACAGGAAGCTCATTGAAAGGCTCCTCAAAACTTCCTCCTTCAATGGTAACTCTCTCTTTTTCTTACTTCTTCTGCTCTTCACTACAACTTTGACTGATTTTTATATATGTTCCATTTTTTCTTTTTATCTTTTAATTTGGGTTCATCCGTAGTTTTATATACTCTATAATTCTCTGCGGTTTAATTTCCCTAATTATTGTTAGTCCATTACTGGATCTTGTGCTCATTGTTGTCCAATCTTTTGGCTAAGTTTAACATGATATTGGATGAGCTACTGCAATGTAATTATAATTTTCTCCTCGATTATACTGTTAATAATCAGAGCTATATTGGAATGACTTTCCAAAGCCTTAGTGGGTTTTTTTTCTCTTTCAATTCAAGCGCACTTAGAAATTAGTCAATATTGGTTGTGTTGAGAGATGATTGATTTAACAAGCTTGATTTGTTTTTTTTTTTTTTTTCACAGTTACTGTTGTGGATTCTGGAAGCAAAGCTTTAGAGCTTCTGGGTTTGGTTAGAGAAAGAAATGGAACCAACCACAGTTCTCCTATTTCCCCTGAAGATCATCGTCAACATCATCAAGTACCATATATATATTCAAGCTTAATTTGGATGTTTATTTGTTTTTTTTAGGCATTGTTTGATTAATTTAGCTTTTGATATTGCATTGCAGGAGATTGAAGTTAATCTCATCATTACAGATTATTGTATGCCAGAGATGACAGGCTTTGATCTTCTCAGAAAGATCAAGGCAAGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAGTCAAGACACACATATATATGCTTTGTTTTTTTAATAATTAGTTGGGTTTTCACTTTCCAAGCAATGTTTTATTCTTTCTCCATCTCCTTCCAAACACAAAATCTGAAAAAGAAAATTCCATCTGATTTTGTAGGAATCTGACTCACTTAAAGACATTCCTGTTGTGATTATGTCCTCTGAGAATGTTCCATCAAGAATCAACAGGTGATGAAAACTCATAGAACAAACCAAGAATAACAACCTTTTTTTTATATATAATAATTATTTCAAGCTAGCATATCAAAATCTGAAAGGATAAACCAGAAAATGTTTGTGAATCTCTGAATCTGAACTAAGTTTTGGTTGAATCAGATGTTTGGAAGAAGGCGCTGAGGAGTTTTTGCTTAAACCAGTGAAATTATCTGATGTGAACAAGCTTAAGCCTTTTATATGTAGAGGAATAAAAGCCAAAGAAATGGATTTCAACCATCTCAAGAGAAAGGAAATGGAAATCATATGAAAGAAGAAGAAGAAGAACATCACAAATGATTTTTTCTCTACTTTTGGGAATTAGTGACCACTATTACTAGATTTTCTAGCGTTAAATAACCAATCATTATTATGTACTTTTCTAATGTTACAAGAGCCATAGTTATTTTGAATTTTGTCT

mRNA sequence

ATGTCCCTTCTCTCTTCTGATCAGCCTCGCTTTCATGTTTTGGCTGTTGATGACAGCCTTGTTGACAGGAAGCTCATTGAAAGGCTCCTCAAAACTTCCTCCTTCAATGTTACTGTTGTGGATTCTGGAAGCAAAGCTTTAGAGCTTCTGGGTTTGGTTAGAGAAAGAAATGGAACCAACCACAGTTCTCCTATTTCCCCTGAAGATCATCGTCAACATCATCAAGAGATTGAAGTTAATCTCATCATTACAGATTATTGTATGCCAGAGATGACAGGCTTTGATCTTCTCAGAAAGATCAAGGAATCTGACTCACTTAAAGACATTCCTGTTGTGATTATGTCCTCTGAGAATGTTCCATCAAGAATCAACAGATGTTTGGAAGAAGGCGCTGAGGAGTTTTTGCTTAAACCAGTGAAATTATCTGATGTGAACAAGCTTAAGCCTTTTATATGTAGAGGAATAAAAGCCAAAGAAATGGATTTCAACCATCTCAAGAGAAAGGAAATGGAAATCATATGA

Coding sequence (CDS)

ATGTCCCTTCTCTCTTCTGATCAGCCTCGCTTTCATGTTTTGGCTGTTGATGACAGCCTTGTTGACAGGAAGCTCATTGAAAGGCTCCTCAAAACTTCCTCCTTCAATGTTACTGTTGTGGATTCTGGAAGCAAAGCTTTAGAGCTTCTGGGTTTGGTTAGAGAAAGAAATGGAACCAACCACAGTTCTCCTATTTCCCCTGAAGATCATCGTCAACATCATCAAGAGATTGAAGTTAATCTCATCATTACAGATTATTGTATGCCAGAGATGACAGGCTTTGATCTTCTCAGAAAGATCAAGGAATCTGACTCACTTAAAGACATTCCTGTTGTGATTATGTCCTCTGAGAATGTTCCATCAAGAATCAACAGATGTTTGGAAGAAGGCGCTGAGGAGTTTTTGCTTAAACCAGTGAAATTATCTGATGTGAACAAGCTTAAGCCTTTTATATGTAGAGGAATAAAAGCCAAAGAAATGGATTTCAACCATCTCAAGAGAAAGGAAATGGAAATCATATGA

Homology

[Close]

BLAST of CSPI05G27580 vs. Swiss-Prot
Match: ORR4_ORYSI (Two-component response regulator ORR4 OS=Oryza sativa subsp. indica GN=RR4 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 8.7e-50
Identity = 104/146 (71.23%), Postives = 119/146 (81.51%), Query Frame = 1


Query: 8   QPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTNHSSPISP 67
           + RFHVLAVDDSL+DRKLIE LLK SS+ VT VDSGSKALELLGL  E  G + SS  SP
Sbjct: 7   ESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDE--GDDSSS--SP 66

Query: 68  EDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVPSRINRCL 127
                 HQEI+VNLIITDYCMP MTG+DLL+++K S SLKDIPVVIMSSENVP+RINRCL
Sbjct: 67  SSSSPDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINRCL 126

Query: 128 EEGAEEFLLKPVKLSDVNKLKPFICR 154
           E+GAEEF LKPVKL+D+ KLK  + +
Sbjct: 127 EDGAEEFFLKPVKLADMKKLKSHLLK 148

[Close]

BLAST of CSPI05G27580 vs. Swiss-Prot
Match: ORR4_ORYSJ (Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica GN=RR4 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 8.7e-50
Identity = 104/146 (71.23%), Postives = 119/146 (81.51%), Query Frame = 1


Query: 8   QPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTNHSSPISP 67
           + RFHVLAVDDSL+DRKLIE LLK SS+ VT VDSGSKALELLGL  E  G + SS  SP
Sbjct: 7   ESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDE--GDDSSS--SP 66

Query: 68  EDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVPSRINRCL 127
                 HQEI+VNLIITDYCMP MTG+DLL+++K S SLKDIPVVIMSSENVP+RINRCL
Sbjct: 67  SSSSPDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINRCL 126

Query: 128 EEGAEEFLLKPVKLSDVNKLKPFICR 154
           E+GAEEF LKPVKL+D+ KLK  + +
Sbjct: 127 EDGAEEFFLKPVKLADMKKLKSHLLK 148

[Close]

BLAST of CSPI05G27580 vs. Swiss-Prot
Match: ORR9_ORYSI (Two-component response regulator ORR9 OS=Oryza sativa subsp. indica GN=RR9 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.3e-49
Identity = 102/143 (71.33%), Postives = 114/143 (79.72%), Query Frame = 1


Query: 11  FHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTNHSSPISPEDH 70
           FHVLAVDDSL DRKLIERLLKTSSF VT VDSGSKALE LGL        H    SP   
Sbjct: 9   FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGL--------HDHEDSPIST 68

Query: 71  RQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVPSRINRCLEEG 130
           +   QE+ VNLIITDYCMP MTG+DLL+KIKES  L+DIPVVIMSS+N+PSRINRCLEEG
Sbjct: 69  QSDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEG 128

Query: 131 AEEFLLKPVKLSDVNKLKPFICR 154
           A+EF LKPV+LSD++KLKP I +
Sbjct: 129 ADEFFLKPVRLSDMSKLKPHILK 143

[Close]

BLAST of CSPI05G27580 vs. Swiss-Prot
Match: ORR9_ORYSJ (Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica GN=RR9 PE=2 SV=2)

HSP 1 Score: 196.1 bits (497), Expect = 3.3e-49
Identity = 102/143 (71.33%), Postives = 114/143 (79.72%), Query Frame = 1


Query: 11  FHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTNHSSPISPEDH 70
           FHVLAVDDSL DRKLIERLLKTSSF VT VDSGSKALE LGL        H    SP   
Sbjct: 9   FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGL--------HDHEDSPIST 68

Query: 71  RQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVPSRINRCLEEG 130
           +   QE+ VNLIITDYCMP MTG+DLL+KIKES  L+DIPVVIMSS+N+PSRINRCLEEG
Sbjct: 69  QSDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEG 128

Query: 131 AEEFLLKPVKLSDVNKLKPFICR 154
           A+EF LKPV+LSD++KLKP I +
Sbjct: 129 ADEFFLKPVRLSDMSKLKPHILK 143

[Close]

BLAST of CSPI05G27580 vs. Swiss-Prot
Match: ORR10_ORYSJ (Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica GN=RR10 PE=2 SV=2)

HSP 1 Score: 195.7 bits (496), Expect = 4.3e-49
Identity = 102/143 (71.33%), Postives = 114/143 (79.72%), Query Frame = 1


Query: 11  FHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTNHSSPISPEDH 70
           FHVLAVDDSL DRKLIERLLKTSSF VT VDSGSKALE LGL        H    SP   
Sbjct: 9   FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGL--------HDHEDSPIST 68

Query: 71  RQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVPSRINRCLEEG 130
           +   QE+ VNLIITDYCMP MTG+DLL+KIKES  L+DIPVVIMSS+N+PSRINRCLEEG
Sbjct: 69  QSDQQEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEG 128

Query: 131 AEEFLLKPVKLSDVNKLKPFICR 154
           A+EF LKPV+LSD++KLKP I +
Sbjct: 129 ADEFFLKPVRLSDMSKLKPHILK 143

[Close]

BLAST of CSPI05G27580 vs. TrEMBL
Match: A0A0A0KV44_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623800 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 1.1e-91
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1


Query: 1   MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTN 60
           MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTN
Sbjct: 1   MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTN 60

Query: 61  HSSPISPEDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVP 120
           HSSPISPEDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVP
Sbjct: 61  HSSPISPEDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVP 120

Query: 121 SRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEMEII 174
           SRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEMEII
Sbjct: 121 SRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEMEII 173

[Close]

BLAST of CSPI05G27580 vs. TrEMBL
Match: A0A067KWD7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24525 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 8.7e-57
Identity = 122/166 (73.49%), Postives = 138/166 (83.13%), Query Frame = 1


Query: 8   QPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTNHSSPISP 67
           +P+FHVLAVDDSL+DRKLIERLLKTSS++VT VDSGSKALE LGL  E    ++ + +SP
Sbjct: 6   EPQFHVLAVDDSLIDRKLIERLLKTSSYHVTAVDSGSKALEFLGLNEEEQIDSNLTSVSP 65

Query: 68  EDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVPSRINRCL 127
                HHQ++EVNLIITDYCMP MTG+DLLRKIKES SLKDIPVVIMSSENVPSRINRCL
Sbjct: 66  PG--DHHQDVEVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCL 125

Query: 128 EEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEMEII 174
           EEGAEEF LKPV+LSDVNKLKP + +G KAKE D    KRK M+ I
Sbjct: 126 EEGAEEFFLKPVQLSDVNKLKPHLMKG-KAKE-DEPSNKRKGMDEI 167

[Close]

BLAST of CSPI05G27580 vs. TrEMBL
Match: B9RGB1_RICCO (Two-component response regulator ARR8, putative OS=Ricinus communis GN=RCOM_1452640 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.8e-55
Identity = 122/170 (71.76%), Postives = 136/170 (80.00%), Query Frame = 1


Query: 10  RFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTNH------SS 69
           +FHVLAVDDSL+DRKLIERLLKTSSF+VT VDSGSKALE LGL  E            SS
Sbjct: 8   QFHVLAVDDSLIDRKLIERLLKTSSFHVTAVDSGSKALEFLGLNEEEEEEEEEEERRDSS 67

Query: 70  PISPEDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVPSRI 129
           PIS     +HHQ+++VNLIITDYCMP MTG+DLLRKIKES S KDIPVVIMSSENVPSRI
Sbjct: 68  PISVCPDDEHHQDLQVNLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIMSSENVPSRI 127

Query: 130 NRCLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEMEII 174
           NRCLEEGAEEF LKPV+LSDVNKLKP + +G K +E + N+ KRK ME I
Sbjct: 128 NRCLEEGAEEFFLKPVQLSDVNKLKPHMMKG-KTRENEPNN-KRKGMEEI 175

[Close]

BLAST of CSPI05G27580 vs. TrEMBL
Match: A0A061FRZ9_THECC (Two-component response regulator ARR8 OS=Theobroma cacao GN=TCM_045246 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.4e-54
Identity = 117/168 (69.64%), Postives = 136/168 (80.95%), Query Frame = 1


Query: 8   QPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLV-RERNGTNHSSPIS 67
           + +FHVLAVDDSL+DRKLIERLLKTSS++VT VDSGSKALE LGL     +G  + SP S
Sbjct: 6   EAQFHVLAVDDSLIDRKLIERLLKTSSYHVTAVDSGSKALEFLGLNGSHEDGQRNPSPAS 65

Query: 68  PE-DHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVPSRINR 127
              D  QH Q++EVNLIITDYCMP MTG+DLLR+IK S S KDIPVVIMSSEN+PSRINR
Sbjct: 66  VSLDEDQHQQDVEVNLIITDYCMPGMTGYDLLRRIKGSSSFKDIPVVIMSSENIPSRINR 125

Query: 128 CLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEMEII 174
           CLE+GAEEF LKPV+LSDVNKL+P + +G ++KEM  N  KRK ME I
Sbjct: 126 CLEDGAEEFFLKPVQLSDVNKLRPHLMKG-RSKEMQQNISKRKGMEEI 172

[Close]

BLAST of CSPI05G27580 vs. TrEMBL
Match: B9GWX3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s19710g PE=4 SV=2)

HSP 1 Score: 218.4 bits (555), Expect = 6.9e-54
Identity = 120/168 (71.43%), Postives = 137/168 (81.55%), Query Frame = 1


Query: 8   QPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVR--ERNGTNHSSPI 67
           + +FHVLAVDDSL+DRKLIERLLKTSS+ VT VDSGSKALE LGL    E+  +N SS +
Sbjct: 10  ETQFHVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLSGDDEQRDSNPSS-V 69

Query: 68  SPEDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVPSRINR 127
           SP DH  HHQ IE+N+IITDYCMP MTG+DLL+KIKES   KDIPVVIMSSENVPSRINR
Sbjct: 70  SP-DH--HHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINR 129

Query: 128 CLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEMEII 174
           CLEEGAEEF LKPV+LSDVNKL+P + +G + KE D  + KRK ME I
Sbjct: 130 CLEEGAEEFFLKPVQLSDVNKLRPHLMKG-RCKEEDQPNNKRKGMEEI 172

[Close]

BLAST of CSPI05G27580 vs. TAIR10
Match: AT3G57040.1 (AT3G57040.1 response regulator 9)

HSP 1 Score: 192.2 bits (487), Expect = 2.7e-49
Identity = 98/146 (67.12%), Postives = 118/146 (80.82%), Query Frame = 1


Query: 8   QPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTNHSSPISP 67
           + +FHVLAVDDSL DRKLIERLL+ SS  VT VDSGSKALE LGL   R  T+ + P + 
Sbjct: 6   ESQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGL---RQSTDSNDPNAF 65

Query: 68  EDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVPSRINRCL 127
                +HQ +EVNLIITDYCMP MTG+DLL+K+KES + +DIPVVIMSSENVP+RI+RCL
Sbjct: 66  SKAPVNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCL 125

Query: 128 EEGAEEFLLKPVKLSDVNKLKPFICR 154
           EEGAEEF LKPV+L+D+NKLKP + +
Sbjct: 126 EEGAEEFFLKPVRLADLNKLKPHMMK 148

[Close]

BLAST of CSPI05G27580 vs. TAIR10
Match: AT2G41310.1 (AT2G41310.1 response regulator 3)

HSP 1 Score: 191.0 bits (484), Expect = 6.0e-49
Identity = 101/159 (63.52%), Postives = 122/159 (76.73%), Query Frame = 1


Query: 3   LLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTNHS 62
           ++   + +FHVLAVDDSL DRK+IERLL+ SS  VT VDSGSKALE LGL  + N  N  
Sbjct: 1   MVMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNAL 60

Query: 63  SPISPEDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVPSR 122
           S  SP    Q HQE+E+NLIITDYCMP MTG+DLL+K+KES + + IPVVIMSSENVP+R
Sbjct: 61  ST-SP----QIHQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPAR 120

Query: 123 INRCLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMD 162
           I+RCLEEGAEEF LKPVKL+D+ KLKP + +    KE +
Sbjct: 121 ISRCLEEGAEEFFLKPVKLADLTKLKPHMMKTKLKKESE 154

[Close]

BLAST of CSPI05G27580 vs. TAIR10
Match: AT1G74890.1 (AT1G74890.1 response regulator 15)

HSP 1 Score: 173.3 bits (438), Expect = 1.3e-43
Identity = 94/169 (55.62%), Postives = 122/169 (72.19%), Query Frame = 1


Query: 2   SLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTNH 61
           SL SS  P  HVLAVDDS VDRK+IERLLK S+  VT V+SG++AL+ LGL    +G N 
Sbjct: 9   SLSSSSSPELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGL----DGDNG 68

Query: 62  SSPISPEDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVPS 121
           SS +         ++++VNLI+TDY MP +TG++LL+KIKES +L++IPVVIMSSEN+  
Sbjct: 69  SSGL---------KDLKVNLIVTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQP 128

Query: 122 RINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEM 171
           RI +C+ EGAEEFLLKPVKL+DV +LK  I RG +A+E     L  K +
Sbjct: 129 RIEQCMIEGAEEFLLKPVKLADVKRLKELIMRGGEAEEGKTKKLSPKRI 164

[Close]

BLAST of CSPI05G27580 vs. TAIR10
Match: AT1G59940.1 (AT1G59940.1 response regulator 3)

HSP 1 Score: 165.6 bits (418), Expect = 2.7e-41
Identity = 86/150 (57.33%), Postives = 110/150 (73.33%), Query Frame = 1


Query: 7   DQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTNHSSPIS 66
           D  + HVLAVDDSLVDR +IERLL+ +S  VT VDSG +ALE LGL  ++          
Sbjct: 29  DSDQVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFD---- 88

Query: 67  PEDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVPSRINRC 126
                     ++V+LIITDYCMP MTG++LL+KIKES S K++PVVIMSSENV +RI+RC
Sbjct: 89  ---------RLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRC 148

Query: 127 LEEGAEEFLLKPVKLSDVNKLKPFICRGIK 157
           LEEGAE+FLLKPVKL+DV +L+ ++ R +K
Sbjct: 149 LEEGAEDFLLKPVKLADVKRLRSYLTRDVK 165

[Close]

BLAST of CSPI05G27580 vs. TAIR10
Match: AT3G48100.1 (AT3G48100.1 response regulator 5)

HSP 1 Score: 162.9 bits (411), Expect = 1.7e-40
Identity = 90/161 (55.90%), Postives = 122/161 (75.78%), Query Frame = 1


Query: 12  HVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTNHSSPISPEDHR 71
           HVLAVDDS+VDRK IERLL+ SS  VTVVDS ++AL+ LGL    +G N+SS        
Sbjct: 26  HVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL----DGENNSSV------- 85

Query: 72  QHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVPSRINRCLEEGA 131
              +++++NLI+TDY MP MTG++LL+KIKES + ++IPVVIMSSEN+  RI+RCLEEGA
Sbjct: 86  -GFEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGA 145

Query: 132 EEFLLKPVKLSDVNKLKPFICRGIKAKEMDF-NHLKRKEME 172
           E+FLLKPVKL+DV +L+  +   +KA+E  F N + ++E+E
Sbjct: 146 EDFLLKPVKLADVKRLRDSL---MKAEERAFKNIMHKRELE 171

[Close]

BLAST of CSPI05G27580 vs. NCBI nr
Match: gi|449449356|ref|XP_004142431.1| (PREDICTED: two-component response regulator ARR9-like [Cucumis sativus])

HSP 1 Score: 344.0 bits (881), Expect = 1.6e-91
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1


Query: 1   MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTN 60
           MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTN
Sbjct: 1   MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTN 60

Query: 61  HSSPISPEDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVP 120
           HSSPISPEDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVP
Sbjct: 61  HSSPISPEDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVP 120

Query: 121 SRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEMEII 174
           SRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEMEII
Sbjct: 121 SRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEMEII 173

[Close]

BLAST of CSPI05G27580 vs. NCBI nr
Match: gi|659092213|ref|XP_008446956.1| (PREDICTED: two-component response regulator ARR9-like isoform X1 [Cucumis melo])

HSP 1 Score: 330.1 bits (845), Expect = 2.3e-87
Identity = 167/174 (95.98%), Postives = 171/174 (98.28%), Query Frame = 1


Query: 1   MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTN 60
           MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVT VDSGSKALELLGLVRERNGTN
Sbjct: 1   MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGTN 60

Query: 61  HSSPISPEDHRQ-HHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENV 120
           H+SPISPE+HRQ HHQEIEVNLIITDYCMPEMTG+DLLRKIKESDSLKDIPVVIMSSENV
Sbjct: 61  HNSPISPENHRQHHHQEIEVNLIITDYCMPEMTGYDLLRKIKESDSLKDIPVVIMSSENV 120

Query: 121 PSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEMEII 174
           PSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG KAKE+DFNHLKRKEMEII
Sbjct: 121 PSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGTKAKEIDFNHLKRKEMEII 174

[Close]

BLAST of CSPI05G27580 vs. NCBI nr
Match: gi|643733683|gb|KDP40526.1| (hypothetical protein JCGZ_24525 [Jatropha curcas])

HSP 1 Score: 228.0 bits (580), Expect = 1.2e-56
Identity = 122/166 (73.49%), Postives = 138/166 (83.13%), Query Frame = 1


Query: 8   QPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTNHSSPISP 67
           +P+FHVLAVDDSL+DRKLIERLLKTSS++VT VDSGSKALE LGL  E    ++ + +SP
Sbjct: 6   EPQFHVLAVDDSLIDRKLIERLLKTSSYHVTAVDSGSKALEFLGLNEEEQIDSNLTSVSP 65

Query: 68  EDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVPSRINRCL 127
                HHQ++EVNLIITDYCMP MTG+DLLRKIKES SLKDIPVVIMSSENVPSRINRCL
Sbjct: 66  PG--DHHQDVEVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCL 125

Query: 128 EEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEMEII 174
           EEGAEEF LKPV+LSDVNKLKP + +G KAKE D    KRK M+ I
Sbjct: 126 EEGAEEFFLKPVQLSDVNKLKPHLMKG-KAKE-DEPSNKRKGMDEI 167

[Close]

BLAST of CSPI05G27580 vs. NCBI nr
Match: gi|255544001|ref|XP_002513063.1| (PREDICTED: two-component response regulator ARR9 [Ricinus communis])

HSP 1 Score: 223.0 bits (567), Expect = 4.0e-55
Identity = 122/170 (71.76%), Postives = 136/170 (80.00%), Query Frame = 1


Query: 10  RFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTNH------SS 69
           +FHVLAVDDSL+DRKLIERLLKTSSF+VT VDSGSKALE LGL  E            SS
Sbjct: 8   QFHVLAVDDSLIDRKLIERLLKTSSFHVTAVDSGSKALEFLGLNEEEEEEEEEEERRDSS 67

Query: 70  PISPEDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVPSRI 129
           PIS     +HHQ+++VNLIITDYCMP MTG+DLLRKIKES S KDIPVVIMSSENVPSRI
Sbjct: 68  PISVCPDDEHHQDLQVNLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIMSSENVPSRI 127

Query: 130 NRCLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEMEII 174
           NRCLEEGAEEF LKPV+LSDVNKLKP + +G K +E + N+ KRK ME I
Sbjct: 128 NRCLEEGAEEFFLKPVQLSDVNKLKPHMMKG-KTRENEPNN-KRKGMEEI 175

[Close]

BLAST of CSPI05G27580 vs. NCBI nr
Match: gi|590569360|ref|XP_007011051.1| (Two-component response regulator ARR8 [Theobroma cacao])

HSP 1 Score: 220.7 bits (561), Expect = 2.0e-54
Identity = 117/168 (69.64%), Postives = 136/168 (80.95%), Query Frame = 1


Query: 8   QPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLV-RERNGTNHSSPIS 67
           + +FHVLAVDDSL+DRKLIERLLKTSS++VT VDSGSKALE LGL     +G  + SP S
Sbjct: 6   EAQFHVLAVDDSLIDRKLIERLLKTSSYHVTAVDSGSKALEFLGLNGSHEDGQRNPSPAS 65

Query: 68  PE-DHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVPSRINR 127
              D  QH Q++EVNLIITDYCMP MTG+DLLR+IK S S KDIPVVIMSSEN+PSRINR
Sbjct: 66  VSLDEDQHQQDVEVNLIITDYCMPGMTGYDLLRRIKGSSSFKDIPVVIMSSENIPSRINR 125

Query: 128 CLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEMEII 174
           CLE+GAEEF LKPV+LSDVNKL+P + +G ++KEM  N  KRK ME I
Sbjct: 126 CLEDGAEEFFLKPVQLSDVNKLRPHLMKG-RSKEMQQNISKRKGMEEI 172

The following BLAST results are available for this feature:

BLAST of CSPI05G27580 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ORR4_ORYSI	8.7e-50	71.23	Two-component response regulator ORR4 OS=Oryza sativa subsp. indica GN=RR4 PE=2 ...	[more]
ORR4_ORYSJ	8.7e-50	71.23	Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica GN=RR4 PE=...	[more]
ORR9_ORYSI	3.3e-49	71.33	Two-component response regulator ORR9 OS=Oryza sativa subsp. indica GN=RR9 PE=2 ...	[more]
ORR9_ORYSJ	3.3e-49	71.33	Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica GN=RR9 PE=...	[more]
ORR10_ORYSJ	4.3e-49	71.33	Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica GN=RR10 P...	[more]

BLAST of CSPI05G27580 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV44_CUCSA	1.1e-91	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623800 PE=4 SV=1	[more]
A0A067KWD7_JATCU	8.7e-57	73.49	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24525 PE=4 SV=1	[more]
B9RGB1_RICCO	2.8e-55	71.76	Two-component response regulator ARR8, putative OS=Ricinus communis GN=RCOM_1452...	[more]
A0A061FRZ9_THECC	1.4e-54	69.64	Two-component response regulator ARR8 OS=Theobroma cacao GN=TCM_045246 PE=4 SV=1	[more]
B9GWX3_POPTR	6.9e-54	71.43	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s19710g PE=4 SV=2	[more]

BLAST of CSPI05G27580 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57040.1	2.7e-49	67.12	response regulator 9	[more]
AT2G41310.1	6.0e-49	63.52	response regulator 3	[more]
AT1G74890.1	1.3e-43	55.62	response regulator 15	[more]
AT1G59940.1	2.7e-41	57.33	response regulator 3	[more]
AT3G48100.1	1.7e-40	55.90	response regulator 5	[more]

BLAST of CSPI05G27580 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449356\|ref\|XP_004142431.1\|	1.6e-91	100.00	PREDICTED: two-component response regulator ARR9-like [Cucumis sativus]	[more]
gi\|659092213\|ref\|XP_008446956.1\|	2.3e-87	95.98	PREDICTED: two-component response regulator ARR9-like isoform X1 [Cucumis melo]	[more]
gi\|643733683\|gb\|KDP40526.1\|	1.2e-56	73.49	hypothetical protein JCGZ_24525 [Jatropha curcas]	[more]
gi\|255544001\|ref\|XP_002513063.1\|	4.0e-55	71.76	PREDICTED: two-component response regulator ARR9 [Ricinus communis]	[more]
gi\|590569360\|ref\|XP_007011051.1\|	2.0e-54	69.64	Two-component response regulator ARR8 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001789	Sig_transdc_resp-reg_receiver
IPR011006	CheY-like_superfamily

Vocabulary: **Biological Process**
Term	Definition
GO:0000160	phosphorelay signal transduction system

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G27580.1	CSPI05G27580.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 13..144 score: 3.7
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 11..148 score: 7.2
IPR001789	Signal transduction response regulator, receiver domain	PROFILE	PS50110	RESPONSE_REGULATORY	coord: 12..152 score: 33
IPR011006	CheY-like superfamily	unknown	SSF52172	CheY-like	coord: 10..144 score: 3.15
None	No IPR available	GENE3D	G3DSA:3.40.50.2300		coord: 8..145 score: 6.6
None	No IPR available	PANTHER	PTHR26402	RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM	coord: 75..173 score: 1.5E-89coord: 11..50 score: 1.5
None	No IPR available	PANTHER	PTHR26402:SF574	SUBFAMILY NOT NAMED	coord: 75..173 score: 1.5E-89coord: 11..50 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI05G27580	Cla009939	Watermelon (97103) v1	cpiwmB404
CSPI05G27580	Csa5G623800	Cucumber (Chinese Long) v2	cpicuB239
CSPI05G27580	MELO3C012470	Melon (DHL92) v3.5.1	cpimeB369
CSPI05G27580	ClCG05G026780	Watermelon (Charleston Gray)	cpiwcgB408
CSPI05G27580	Lsi04G000290	Bottle gourd (USVL1VR-Ls)	cpilsiB372
CSPI05G27580	MELO3C012470.2	Melon (DHL92) v3.6.1	cpimedB363
CSPI05G27580	CsaV3_5G036740	Cucumber (Chinese Long) v3	cpicucB284
CSPI05G27580	Cla97C05G109060	Watermelon (97103) v2	cpiwmbB397
CSPI05G27580	Bhi07G001036	Wax gourd	cpiwgoB519
CSPI05G27580	Cucsa.307960	Cucumber (Gy14) v1	cgycpiB464
CSPI05G27580	CmoCh04G014040	Cucurbita moschata (Rifu)	cmocpiB745
CSPI05G27580	Cp4.1LG01g15020	Cucurbita pepo (Zucchini)	cpecpiB439
CSPI05G27580	CsGy5G026990	Cucumber (Gy14) v2	cgybcpiB225

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI05G27580	Cucurbita maxima (Rimu)	cmacpiB423
CSPI05G27580	Cucurbita maxima (Rimu)	cmacpiB755
CSPI05G27580	Cucurbita moschata (Rifu)	cmocpiB411
CSPI05G27580	Cucurbita pepo (Zucchini)	cpecpiB036
CSPI05G27580	Silver-seed gourd	carcpiB0758
CSPI05G27580	Silver-seed gourd	carcpiB0877