CmoCh04G014040 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G014040
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTwo-component response regulator
LocationCmo_Chr04 : 7166482 .. 7167765 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCAATTCCCATGGCCCTTGTCTCTTCTAATGCTCAATTCCATGTCTTGGCTGTCGATGACAGCCTTGTAGACAGGAAGCTGATTGAAAGGCTGCTCAAAACTTCCTCCTTCAATGGTACTCTGCCATTGAACCTTCTTCTCTCTCTTTCTCACTCTCTCTAGGGTTCTAAGAATGGCTTGAATTTAGGCTCTAAACAGTTGGTTTGGTTTTTTTCTTTTTACAGTTACGGCTGTGGATTCTGGAAGCAAGGCTTTGGAGCTTCTGGGTTTGGTTAGAGAGAGAAATGGAAGCATCCATTCTCCTTATTCCCCTGAAAATCATCATCATCAACATCAAGTTAAGGATTTCCAATTTGGATGTTTGTTTGTTGTTCTTTTGGGCATTGTTTTGATTTGTTTTGCTTTGATTGCAGGAGATTGAAGTTAATCTCATCATTACAGATTACTGTATGCCAGAAATGACAGGCTATGATCTTCTAAGAAAGATCAAGGCAAGTTTCTTCTTCTTTTCAAGACATAAGGCTTAGTTTTCTTACTTTCCAACCAATTTCAATCTGAAAAGGAAAATCCTATCTGGTTTTGCAGGAATCTGACTCACTTAAAGACATACCTGTCGTGATTATGTCCTCTGAGAATGTTCCAGCAAGAATCAACAGGTGAGGAGGGAAACAGCTAGAACAGGAACCATTTTGTTTCCAAGCAAATCCAAATCTGAAATGATAAACAACCAGTAAATTCATGTCAATCATGTCAATCTGAATTGGGTTTTGGTTATTTGTTTTGAATCAGATGTTTGGAAGAAGGAGCCGAGGAGTTTTTGCTGAAACCAGTGAAATTATCTGATGTCAACAAGCTTAAGCCTTTCATATGCAGAGGAAAAGCCAAGGAAATGGATTGCAACAATCTCAAGAGAAAGGAAATGGAACAGAGTCAATCATCTGAGAGAACAAGAGCAAAATACAATGAACCTCTCTAAATCTAAACTTCCGGCTTACATTATCAGTTCTTAGAGTTAAATGACCATTATTATGTACTTTCTAATGTTACAAGAGTGAATCATTTTGAGTGTCTGAATGTACAAAGTTGATGAAACTTCGGATTTTTAGGCTTAGAAATCTCATTATTTTGTAGTTTAGATATCTGTACTCATGATTCGATCTCTACCAAAACAAACAAACAAAATAAAGACATACAATCTTGTCTTTTAATTTTCCAATTTTGGCACTGAGCCAC

mRNA sequence

CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCAATTCCCATGGCCCTTGTCTCTTCTAATGCTCAATTCCATGTCTTGGCTGTCGATGACAGCCTTGTAGACAGGAAGCTGATTGAAAGGCTGCTCAAAACTTCCTCCTTCAATGTTACGGCTGTGGATTCTGGAAGCAAGGCTTTGGAGCTTCTGGGTTTGGTTAGAGAGAGAAATGGAAGCATCCATTCTCCTTATTCCCCTGAAAATCATCATCATCAACATCAAGAGATTGAAGTTAATCTCATCATTACAGATTACTGTATGCCAGAAATGACAGGCTATGATCTTCTAAGAAAGATCAAGGCAAGAAAATCCTATCTGGTTTTGCAGGAATCTGACTCACTTAAAGACATACCTGTCGTGATTATGTCCTCTGAGAATGTTCCAGCAAGAATCAACAGATGTTTGGAAGAAGGAGCCGAGGAGTTTTTGCTGAAACCAGTGAAATTATCTGATGTCAACAAGCTTAAGCCTTTCATATGCAGAGGAAAAGCCAAGGAAATGGATTGCAACAATCTCAAGAGAAAGGAAATGGAACAGAGTCAATCATCTGAGAGAACAAGAGCAAAATACAATGAACCTCTCTAAATCTAAACTTCCGGCTTACATTATCAGTTCTTAGAGTTAAATGACCATTATTATGTACTTTCTAATGTTACAAGAGTGAATCATTTTGAGTGTCTGAATGTACAAAGTTGATGAAACTTCGGATTTTTAGGCTTAGAAATCTCATTATTTTGTAGTTTAGATATCTGTACTCATGATTCGATCTCTACCAAAACAAACAAACAAAATAAAGACATACAATCTTGTCTTTTAATTTTCCAATTTTGGCACTGAGCCAC

Coding sequence (CDS)

ATGGCCCTTGTCTCTTCTAATGCTCAATTCCATGTCTTGGCTGTCGATGACAGCCTTGTAGACAGGAAGCTGATTGAAAGGCTGCTCAAAACTTCCTCCTTCAATGTTACGGCTGTGGATTCTGGAAGCAAGGCTTTGGAGCTTCTGGGTTTGGTTAGAGAGAGAAATGGAAGCATCCATTCTCCTTATTCCCCTGAAAATCATCATCATCAACATCAAGAGATTGAAGTTAATCTCATCATTACAGATTACTGTATGCCAGAAATGACAGGCTATGATCTTCTAAGAAAGATCAAGGCAAGAAAATCCTATCTGGTTTTGCAGGAATCTGACTCACTTAAAGACATACCTGTCGTGATTATGTCCTCTGAGAATGTTCCAGCAAGAATCAACAGATGTTTGGAAGAAGGAGCCGAGGAGTTTTTGCTGAAACCAGTGAAATTATCTGATGTCAACAAGCTTAAGCCTTTCATATGCAGAGGAAAAGCCAAGGAAATGGATTGCAACAATCTCAAGAGAAAGGAAATGGAACAGAGTCAATCATCTGAGAGAACAAGAGCAAAATACAATGAACCTCTCTAA
Homology
[Close]
BLAST of CmoCh04G014040 vs. Swiss-Prot
Match: ORR4_ORYSI (Two-component response regulator ORR4 OS=Oryza sativa subsp. indica GN=RR4 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 9.6e-50
Identity = 107/162 (66.05%), Postives = 123/162 (75.93%), Query Frame = 1 

Query: 1   MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH 60
           M +V + ++FHVLAVDDSL+DRKLIE LLK SS+ VT VDSGSKALELLGL  E + S  
Sbjct: 1   MTVVDAESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSS 60

Query: 61  SPYSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVI 120
           SP S       HQEI+VNLIITDYCMP MTGYDLL+++K          S SLKDIPVVI
Sbjct: 61  SPSSSSP---DHQEIDVNLIITDYCMPGMTGYDLLKRVKG---------SSSLKDIPVVI 120

Query: 121 MSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGK 163
           MSSENVPARINRCLE+GAEEF LKPVKL+D+ KLK  + + K
Sbjct: 121 MSSENVPARINRCLEDGAEEFFLKPVKLADMKKLKSHLLKRK 150

[Close]
BLAST of CmoCh04G014040 vs. Swiss-Prot
Match: ORR4_ORYSJ (Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica GN=RR4 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 9.6e-50
Identity = 107/162 (66.05%), Postives = 123/162 (75.93%), Query Frame = 1 

Query: 1   MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH 60
           M +V + ++FHVLAVDDSL+DRKLIE LLK SS+ VT VDSGSKALELLGL  E + S  
Sbjct: 1   MTVVDAESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSS 60

Query: 61  SPYSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVI 120
           SP S       HQEI+VNLIITDYCMP MTGYDLL+++K          S SLKDIPVVI
Sbjct: 61  SPSSSSP---DHQEIDVNLIITDYCMPGMTGYDLLKRVKG---------SSSLKDIPVVI 120

Query: 121 MSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGK 163
           MSSENVPARINRCLE+GAEEF LKPVKL+D+ KLK  + + K
Sbjct: 121 MSSENVPARINRCLEDGAEEFFLKPVKLADMKKLKSHLLKRK 150

[Close]
BLAST of CmoCh04G014040 vs. Swiss-Prot
Match: ORR10_ORYSI (Two-component response regulator ORR10 OS=Oryza sativa subsp. indica GN=RR10 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.2e-47
Identity = 112/195 (57.44%), Postives = 129/195 (66.15%), Query Frame = 1 

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPY 63
           V+  A FHVLAVDDSL DRKLIERLLKTSSF VT VDSGSKALE LGL    +       
Sbjct: 3   VAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHED------- 62

Query: 64  SPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMSS 123
           SP +     QE+ VNLIITDYCMP MTGYDLL+KIK         ES  L+DIPVVIMSS
Sbjct: 63  SPISTQSDQQEVGVNLIITDYCMPGMTGYDLLKKIK---------ESSYLRDIPVVIMSS 122

Query: 124 ENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKE-----------MDCNNLK 183
           +N+P+RINRCLEEGA+EF LKPV+LSD++KLKP I + + KE            + NN  
Sbjct: 123 DNIPSRINRCLEEGADEFFLKPVRLSDMSKLKPHILKSRCKEHYQQEQHLQSNSESNNSS 181

Query: 184 RKEMEQSQSSERTRA 188
               E S SS  T +
Sbjct: 183 NPTSENSSSSTSTNS 181

[Close]
BLAST of CmoCh04G014040 vs. Swiss-Prot
Match: ORR10_ORYSJ (Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica GN=RR10 PE=2 SV=2)

HSP 1 Score: 191.0 bits (484), Expect = 1.2e-47
Identity = 112/195 (57.44%), Postives = 129/195 (66.15%), Query Frame = 1 

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPY 63
           V+  A FHVLAVDDSL DRKLIERLLKTSSF VT VDSGSKALE LGL    +       
Sbjct: 3   VAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHED------- 62

Query: 64  SPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMSS 123
           SP +     QE+ VNLIITDYCMP MTGYDLL+KIK         ES  L+DIPVVIMSS
Sbjct: 63  SPISTQSDQQEVGVNLIITDYCMPGMTGYDLLKKIK---------ESSYLRDIPVVIMSS 122

Query: 124 ENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKE-----------MDCNNLK 183
           +N+P+RINRCLEEGA+EF LKPV+LSD++KLKP I + + KE            + NN  
Sbjct: 123 DNIPSRINRCLEEGADEFFLKPVRLSDMSKLKPHILKSRCKEHYQQEQHLQSNSESNNSS 181

Query: 184 RKEMEQSQSSERTRA 188
               E S SS  T +
Sbjct: 183 NPTSENSSSSTSTNS 181

[Close]
BLAST of CmoCh04G014040 vs. Swiss-Prot
Match: ORR9_ORYSJ (Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica GN=RR9 PE=2 SV=2)

HSP 1 Score: 190.7 bits (483), Expect = 1.5e-47
Identity = 111/190 (58.42%), Postives = 127/190 (66.84%), Query Frame = 1 

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPY 63
           V+  A FHVLAVDDSL DRKLIERLLKTSSF VT VDSGSKALE LGL    +       
Sbjct: 3   VAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHED------- 62

Query: 64  SPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMSS 123
           SP +     QE+ VNLIITDYCMP MTGYDLL+KIK         ES  L+DIPVVIMSS
Sbjct: 63  SPISTQSDQQEVAVNLIITDYCMPGMTGYDLLKKIK---------ESSYLRDIPVVIMSS 122

Query: 124 ENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKE-----------MDCNNLK 183
           +N+P+RINRCLEEGA+EF LKPV+LSD++KLKP I + + KE            + NN  
Sbjct: 123 DNIPSRINRCLEEGADEFFLKPVRLSDMSKLKPHILKSRCKEHYQQEQNLQSNSESNNSS 176

[Close]
BLAST of CmoCh04G014040 vs. TrEMBL
Match: A0A0A0KV44_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623800 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.4e-71
Identity = 151/180 (83.89%), Postives = 160/180 (88.89%), Query Frame = 1 

Query: 1   MALVSSNA-QFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSI 60
           M+L+SS+  +FHVLAVDDSLVDRKLIERLLKTSSFNVT VDSGSKALELLGLVRERNG+ 
Sbjct: 1   MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTN 60

Query: 61  HS-PYSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPV 120
           HS P SPE+H   HQEIEVNLIITDYCMPEMTG+DLLRKIK         ESDSLKDIPV
Sbjct: 61  HSSPISPEDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIK---------ESDSLKDIPV 120

Query: 121 VIMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG-KAKEMDCNNLKRKEME 178
           VIMSSENVP+RINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG KAKEMD N+LKRKEME
Sbjct: 121 VIMSSENVPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEME 171

[Close]
BLAST of CmoCh04G014040 vs. TrEMBL
Match: M5X712_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025335mg PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.3e-58
Identity = 130/191 (68.06%), Postives = 150/191 (78.53%), Query Frame = 1 

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPY 63
           +S+ AQFHVLAVDDS++DRKLIERLLKTSS+ VTAVDSGSKALE LGL  +++  I +  
Sbjct: 3   LSAEAQFHVLAVDDSVIDRKLIERLLKTSSYQVTAVDSGSKALEFLGL-HDQDDQIDADI 62

Query: 64  ---SPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVI 123
              SP+NH    Q++EVNLIITDYCMP MTGYDLLRKIK         ES  LKDIPVVI
Sbjct: 63  PSLSPDNHQ---QDVEVNLIITDYCMPGMTGYDLLRKIK---------ESHVLKDIPVVI 122

Query: 124 MSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQ 183
           MSSEN P+RINRCLEEGAEEF LKPV+LSDVNKLKP + +G+A E   NN KRK MEQ+Q
Sbjct: 123 MSSENEPSRINRCLEEGAEEFFLKPVQLSDVNKLKPHMLKGRAMEDQSNNNKRKVMEQTQ 180

Query: 184 SSERTRAKYNE 192
           + ERTR KYN+
Sbjct: 183 TPERTRTKYND 180

[Close]
BLAST of CmoCh04G014040 vs. TrEMBL
Match: A0A067KWD7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24525 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.3e-57
Identity = 129/187 (68.98%), Postives = 147/187 (78.61%), Query Frame = 1 

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERN-GSIHSP 63
           +++  QFHVLAVDDSL+DRKLIERLLKTSS++VTAVDSGSKALE LGL  E    S  + 
Sbjct: 3   MATEPQFHVLAVDDSLIDRKLIERLLKTSSYHVTAVDSGSKALEFLGLNEEEQIDSNLTS 62

Query: 64  YSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMS 123
            SP   HHQ  ++EVNLIITDYCMP MTGYDLLRKIK         ES SLKDIPVVIMS
Sbjct: 63  VSPPGDHHQ--DVEVNLIITDYCMPGMTGYDLLRKIK---------ESKSLKDIPVVIMS 122

Query: 124 SENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQSS 183
           SENVP+RINRCLEEGAEEF LKPV+LSDVNKLKP + +GKAKE + +N KRK M++  S 
Sbjct: 123 SENVPSRINRCLEEGAEEFFLKPVQLSDVNKLKPHLMKGKAKEDEPSN-KRKGMDEIHSP 177

Query: 184 ERTRAKY 190
           ERTR +Y
Sbjct: 183 ERTRTRY 177

[Close]
BLAST of CmoCh04G014040 vs. TrEMBL
Match: B9GWX3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s19710g PE=4 SV=2)

HSP 1 Score: 228.0 bits (580), Expect = 9.7e-57
Identity = 130/196 (66.33%), Postives = 151/196 (77.04%), Query Frame = 1 

Query: 1   MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVR--ERNGS 60
           +A +++  QFHVLAVDDSL+DRKLIERLLKTSS+ VTAVDSGSKALE LGL    E+  S
Sbjct: 4   LATLATETQFHVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLSGDDEQRDS 63

Query: 61  IHSPYSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPV 120
             S  SP+ HHHQH  IE+N+IITDYCMP MTGYDLL+KIK         ES   KDIPV
Sbjct: 64  NPSSVSPD-HHHQH--IEINMIITDYCMPGMTGYDLLKKIK---------ESKYFKDIPV 123

Query: 121 VIMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQ 180
           VIMSSENVP+RINRCLEEGAEEF LKPV+LSDVNKL+P + +G+ KE D  N KRK ME+
Sbjct: 124 VIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVNKLRPHLMKGRCKEEDQPNNKRKGMEE 183

Query: 181 SQSSE-RTRAKYNEPL 194
             +S  RTR++YNE L
Sbjct: 184 IVNSPGRTRSRYNEGL 187

[Close]
BLAST of CmoCh04G014040 vs. TrEMBL
Match: B9RGB1_RICCO (Two-component response regulator ARR8, putative OS=Ricinus communis GN=RCOM_1452640 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.3e-56
Identity = 128/195 (65.64%), Postives = 148/195 (75.90%), Query Frame = 1 

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGL---------VRE 63
           +++++QFHVLAVDDSL+DRKLIERLLKTSSF+VTAVDSGSKALE LGL           E
Sbjct: 3   MAADSQFHVLAVDDSLIDRKLIERLLKTSSFHVTAVDSGSKALEFLGLNEEEEEEEEEEE 62

Query: 64  RNGSIHSPYSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLK 123
           R  S      P++ HHQ  +++VNLIITDYCMP MTGYDLLRKIK         ES S K
Sbjct: 63  RRDSSPISVCPDDEHHQ--DLQVNLIITDYCMPGMTGYDLLRKIK---------ESKSFK 122

Query: 124 DIPVVIMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRK 183
           DIPVVIMSSENVP+RINRCLEEGAEEF LKPV+LSDVNKLKP + +GK +E + NN KRK
Sbjct: 123 DIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVNKLKPHMMKGKTRENEPNN-KRK 182

Query: 184 EMEQSQSSERTRAKY 190
            ME+  S ERTR +Y
Sbjct: 183 GMEEIHSPERTRTRY 185

[Close]
BLAST of CmoCh04G014040 vs. TAIR10
Match: AT3G57040.1 (AT3G57040.1 response regulator 9)

HSP 1 Score: 189.5 bits (480), Expect = 1.9e-48
Identity = 108/182 (59.34%), Postives = 132/182 (72.53%), Query Frame = 1 

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPY 63
           +++ +QFHVLAVDDSL DRKLIERLL+ SS  VT VDSGSKALE LGL +  + +  + +
Sbjct: 3   MAAESQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAF 62

Query: 64  S--PENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIM 123
           S  P NH    Q +EVNLIITDYCMP MTGYDLL+K+K         ES + +DIPVVIM
Sbjct: 63  SKAPVNH----QVVEVNLIITDYCMPGMTGYDLLKKVK---------ESSAFRDIPVVIM 122

Query: 124 SSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQS 183
           SSENVPARI+RCLEEGAEEF LKPV+L+D+NKLKP + + K K     N K +E+E +  
Sbjct: 123 SSENVPARISRCLEEGAEEFFLKPVRLADLNKLKPHMMKTKLK-----NQKLEEIETTSK 166

[Close]
BLAST of CmoCh04G014040 vs. TAIR10
Match: AT2G41310.1 (AT2G41310.1 response regulator 3)

HSP 1 Score: 182.6 bits (462), Expect = 2.4e-46
Identity = 113/232 (48.71%), Postives = 140/232 (60.34%), Query Frame = 1 

Query: 3   LVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSP 62
           ++ + ++FHVLAVDDSL DRK+IERLL+ SS  VT VDSGSKALE LGL  + N      
Sbjct: 2   VMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALS 61

Query: 63  YSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMS 122
            SP+ H    QE+E+NLIITDYCMP MTGYDLL+K+K         ES + + IPVVIMS
Sbjct: 62  TSPQIH----QEVEINLIITDYCMPGMTGYDLLKKVK---------ESAAFRSIPVVIMS 121

Query: 123 SENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAK------------------ 182
           SENVPARI+RCLEEGAEEF LKPVKL+D+ KLKP + + K K                  
Sbjct: 122 SENVPARISRCLEEGAEEFFLKPVKLADLTKLKPHMMKTKLKKESEKPVAIEEIVVSKPE 181

Query: 183 ------------------EMDCNNL-------KRKEMEQSQSSERTRAKYNE 192
                             E++   L       KRK ME+  S++R+R KYN+
Sbjct: 182 IEEEEEESSVIEILPLHQEIESEQLEPMLSSNKRKAMEEVVSTDRSRPKYND 220

[Close]
BLAST of CmoCh04G014040 vs. TAIR10
Match: AT1G59940.1 (AT1G59940.1 response regulator 3)

HSP 1 Score: 156.8 bits (395), Expect = 1.4e-38
Identity = 87/152 (57.24%), Postives = 108/152 (71.05%), Query Frame = 1 

Query: 9   QFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPYSPENH 68
           Q HVLAVDDSLVDR +IERLL+ +S  VTAVDSG +ALE LGL  ++             
Sbjct: 32  QVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAV---------- 91

Query: 69  HHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMSSENVPA 128
             +   ++V+LIITDYCMP MTGY+LL+KIK         ES S K++PVVIMSSENV  
Sbjct: 92  --EFDRLKVDLIITDYCMPGMTGYELLKKIK---------ESTSFKEVPVVIMSSENVMT 151

Query: 129 RINRCLEEGAEEFLLKPVKLSDVNKLKPFICR 161
           RI+RCLEEGAE+FLLKPVKL+DV +L+ ++ R
Sbjct: 152 RIDRCLEEGAEDFLLKPVKLADVKRLRSYLTR 162

[Close]
BLAST of CmoCh04G014040 vs. TAIR10
Match: AT1G74890.1 (AT1G74890.1 response regulator 15)

HSP 1 Score: 156.4 bits (394), Expect = 1.8e-38
Identity = 91/187 (48.66%), Postives = 123/187 (65.78%), Query Frame = 1 

Query: 5   SSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPYS 64
           SS+ + HVLAVDDS VDRK+IERLLK S+  VT V+SG++AL+ LGL             
Sbjct: 13  SSSPELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGL------------D 72

Query: 65  PENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMSSE 124
            +N     ++++VNLI+TDY MP +TGY+LL+KIK         ES +L++IPVVIMSSE
Sbjct: 73  GDNGSSGLKDLKVNLIVTDYSMPGLTGYELLKKIK---------ESSALREIPVVIMSSE 132

Query: 125 NVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICR------GKAKEMDCNNLKRKEMEQ 184
           N+  RI +C+ EGAEEFLLKPVKL+DV +LK  I R      GK K++    + + +++ 
Sbjct: 133 NIQPRIEQCMIEGAEEFLLKPVKLADVKRLKELIMRGGEAEEGKTKKLSPKRILQNDIDS 178

Query: 185 SQSSERT 186
           S SS  T
Sbjct: 193 SPSSSST 178

[Close]
BLAST of CmoCh04G014040 vs. TAIR10
Match: AT1G19050.1 (AT1G19050.1 response regulator 7)

HSP 1 Score: 154.1 bits (388), Expect = 9.0e-38
Identity = 89/182 (48.90%), Postives = 121/182 (66.48%), Query Frame = 1 

Query: 3   LVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSP 62
           L  +  + HVLAVDDS+VDRK+IERLL+ SS  VT V+SG++AL+ LGL   +  S    
Sbjct: 17  LTVTTPELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGAS---- 76

Query: 63  YSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMS 122
                     ++++VNLI+TDY MP ++GYDLL+KIK         ES + +++PVVIMS
Sbjct: 77  --------NLKDLKVNLIVTDYSMPGLSGYDLLKKIK---------ESSAFREVPVVIMS 136

Query: 123 SENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMD--CNNLKRKEMEQSQ 182
           SEN+  RI  CL+EGAEEFLLKPVKL+DV ++K  I R +A+E     ++ KRK  E S 
Sbjct: 137 SENILPRIQECLKEGAEEFLLKPVKLADVKRIKQLIMRNEAEECKILSHSNKRKLQEDSD 177

[Close]
BLAST of CmoCh04G014040 vs. NCBI nr
Match: gi|659092213|ref|XP_008446956.1| (PREDICTED: two-component response regulator ARR9-like isoform X1 [Cucumis melo])

HSP 1 Score: 278.5 bits (711), Expect = 8.9e-72
Identity = 154/181 (85.08%), Postives = 162/181 (89.50%), Query Frame = 1 

Query: 1   MALVSSNA-QFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSI 60
           M+L+SS+  +FHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNG+ 
Sbjct: 1   MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGTN 60

Query: 61  H-SPYSPENHH-HQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIP 120
           H SP SPENH  H HQEIEVNLIITDYCMPEMTGYDLLRKIK         ESDSLKDIP
Sbjct: 61  HNSPISPENHRQHHHQEIEVNLIITDYCMPEMTGYDLLRKIK---------ESDSLKDIP 120

Query: 121 VVIMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG-KAKEMDCNNLKRKEM 178
           VVIMSSENVP+RINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG KAKE+D N+LKRKEM
Sbjct: 121 VVIMSSENVPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGTKAKEIDFNHLKRKEM 172

[Close]
BLAST of CmoCh04G014040 vs. NCBI nr
Match: gi|449449356|ref|XP_004142431.1| (PREDICTED: two-component response regulator ARR9-like [Cucumis sativus])

HSP 1 Score: 276.6 bits (706), Expect = 3.4e-71
Identity = 151/180 (83.89%), Postives = 160/180 (88.89%), Query Frame = 1 

Query: 1   MALVSSNA-QFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSI 60
           M+L+SS+  +FHVLAVDDSLVDRKLIERLLKTSSFNVT VDSGSKALELLGLVRERNG+ 
Sbjct: 1   MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTN 60

Query: 61  HS-PYSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPV 120
           HS P SPE+H   HQEIEVNLIITDYCMPEMTG+DLLRKIK         ESDSLKDIPV
Sbjct: 61  HSSPISPEDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIK---------ESDSLKDIPV 120

Query: 121 VIMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG-KAKEMDCNNLKRKEME 178
           VIMSSENVP+RINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG KAKEMD N+LKRKEME
Sbjct: 121 VIMSSENVPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEME 171

[Close]
BLAST of CmoCh04G014040 vs. NCBI nr
Match: gi|596041262|ref|XP_007220067.1| (hypothetical protein PRUPE_ppa025335mg [Prunus persica])

HSP 1 Score: 233.4 bits (594), Expect = 3.3e-58
Identity = 130/191 (68.06%), Postives = 150/191 (78.53%), Query Frame = 1 

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPY 63
           +S+ AQFHVLAVDDS++DRKLIERLLKTSS+ VTAVDSGSKALE LGL  +++  I +  
Sbjct: 3   LSAEAQFHVLAVDDSVIDRKLIERLLKTSSYQVTAVDSGSKALEFLGL-HDQDDQIDADI 62

Query: 64  ---SPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVI 123
              SP+NH    Q++EVNLIITDYCMP MTGYDLLRKIK         ES  LKDIPVVI
Sbjct: 63  PSLSPDNHQ---QDVEVNLIITDYCMPGMTGYDLLRKIK---------ESHVLKDIPVVI 122

Query: 124 MSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQ 183
           MSSEN P+RINRCLEEGAEEF LKPV+LSDVNKLKP + +G+A E   NN KRK MEQ+Q
Sbjct: 123 MSSENEPSRINRCLEEGAEEFFLKPVQLSDVNKLKPHMLKGRAMEDQSNNNKRKVMEQTQ 180

Query: 184 SSERTRAKYNE 192
           + ERTR KYN+
Sbjct: 183 TPERTRTKYND 180

[Close]
BLAST of CmoCh04G014040 vs. NCBI nr
Match: gi|645251207|ref|XP_008231573.1| (PREDICTED: two-component response regulator ARR9-like [Prunus mume])

HSP 1 Score: 231.1 bits (588), Expect = 1.6e-57
Identity = 129/191 (67.54%), Postives = 149/191 (78.01%), Query Frame = 1 

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPY 63
           +S+ AQFHVLAVDDS++DRKLIERLLKTSS+ VTAVDSGSKALE LGL  +++  I +  
Sbjct: 3   LSAEAQFHVLAVDDSVIDRKLIERLLKTSSYQVTAVDSGSKALEFLGL-HDQDDQIDADI 62

Query: 64  ---SPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVI 123
              SP+NHH   Q++EVNLIITDYCMP MTGYDLLRKIK         ES  LKDIPVVI
Sbjct: 63  PSMSPDNHH---QDVEVNLIITDYCMPGMTGYDLLRKIK---------ESHVLKDIPVVI 122

Query: 124 MSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQ 183
           MSSEN P+RINRCLEEGAEEF LKPV+LSDVNKLKP + +G+A E   N  KRK MEQ+Q
Sbjct: 123 MSSENEPSRINRCLEEGAEEFFLKPVQLSDVNKLKPHMLKGRAMEDQSNINKRKVMEQTQ 180

Query: 184 SSERTRAKYNE 192
           + ERTR  YN+
Sbjct: 183 TPERTRTNYND 180

[Close]
BLAST of CmoCh04G014040 vs. NCBI nr
Match: gi|645283138|ref|XP_008245632.1| (PREDICTED: two-component response regulator ARR9-like [Prunus mume])

HSP 1 Score: 230.7 bits (587), Expect = 2.1e-57
Identity = 126/188 (67.02%), Postives = 147/188 (78.19%), Query Frame = 1 

Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPY 63
           +S+ AQFHVLAVDDS++DRKLIERLLKTSS+ VTAVDSGSKALE LGL  +++  I +  
Sbjct: 3   LSAEAQFHVLAVDDSVIDRKLIERLLKTSSYQVTAVDSGSKALEFLGL-HDQDDQIDADI 62

Query: 64  SPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMSS 123
              +  + HQ++EVNLIITDYCMP MTGYDLLRKIK         ES  LKDIPVVIMSS
Sbjct: 63  PSLSPENNHQDVEVNLIITDYCMPGMTGYDLLRKIK---------ESHVLKDIPVVIMSS 122

Query: 124 ENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQSSE 183
           EN P+RINRCLEEGAEEF LKPV+LSDVNKL+P + +GKA E   N  KRK MEQ+Q+ E
Sbjct: 123 ENEPSRINRCLEEGAEEFFLKPVQLSDVNKLRPHMLKGKAMEDQSNINKRKVMEQTQTPE 180

Query: 184 RTRAKYNE 192
           RTR KYN+
Sbjct: 183 RTRTKYND 180

The following BLAST results are available for this feature:
BLAST of CmoCh04G014040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ORR4_ORYSI9.6e-5066.05Two-component response regulator ORR4 OS=Oryza sativa subsp. indica GN=RR4 PE=2 ... [more]
ORR4_ORYSJ9.6e-5066.05Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica GN=RR4 PE=... [more]
ORR10_ORYSI1.2e-4757.44Two-component response regulator ORR10 OS=Oryza sativa subsp. indica GN=RR10 PE=... [more]
ORR10_ORYSJ1.2e-4757.44Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica GN=RR10 P... [more]
ORR9_ORYSJ1.5e-4758.42Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica GN=RR9 PE=... [more]
BLAST of CmoCh04G014040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KV44_CUCSA2.4e-7183.89Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623800 PE=4 SV=1[more]
M5X712_PRUPE2.3e-5868.06Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025335mg PE=4 SV=1[more]
A0A067KWD7_JATCU4.3e-5768.98Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24525 PE=4 SV=1[more]
B9GWX3_POPTR9.7e-5766.33Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s19710g PE=4 SV=2[more]
B9RGB1_RICCO1.3e-5665.64Two-component response regulator ARR8, putative OS=Ricinus communis GN=RCOM_1452... [more]
BLAST of CmoCh04G014040 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G57040.11.9e-4859.34 response regulator 9[more]
AT2G41310.12.4e-4648.71 response regulator 3[more]
AT1G59940.11.4e-3857.24 response regulator 3[more]
AT1G74890.11.8e-3848.66 response regulator 15[more]
AT1G19050.19.0e-3848.90 response regulator 7[more]
BLAST of CmoCh04G014040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659092213|ref|XP_008446956.1|8.9e-7285.08PREDICTED: two-component response regulator ARR9-like isoform X1 [Cucumis melo][more]
gi|449449356|ref|XP_004142431.1|3.4e-7183.89PREDICTED: two-component response regulator ARR9-like [Cucumis sativus][more]
gi|596041262|ref|XP_007220067.1|3.3e-5868.06hypothetical protein PRUPE_ppa025335mg [Prunus persica][more]
gi|645251207|ref|XP_008231573.1|1.6e-5767.54PREDICTED: two-component response regulator ARR9-like [Prunus mume][more]
gi|645283138|ref|XP_008245632.1|2.1e-5767.02PREDICTED: two-component response regulator ARR9-like [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001789Sig_transdc_resp-reg_receiver
IPR011006CheY-like_superfamily
Vocabulary: Biological Process
TermDefinition
GO:0000160phosphorelay signal transduction system
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000160 phosphorelay signal transduction system
cellular_component GO:0005622 intracellular
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G014040.1CmoCh04G014040.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001789Signal transduction response regulator, receiver domainPFAMPF00072Response_regcoord: 12..151
score: 7.0
IPR001789Signal transduction response regulator, receiver domainSMARTSM00448REC_2coord: 10..155
score: 6.5
IPR001789Signal transduction response regulator, receiver domainPROFILEPS50110RESPONSE_REGULATORYcoord: 11..159
score: 32
IPR011006CheY-like superfamilyunknownSSF52172CheY-likecoord: 10..151
score: 2.08
NoneNo IPR availableGENE3DG3DSA:3.40.50.2300coord: 7..153
score: 3.7
NoneNo IPR availablePANTHERPTHR26402RESPONSE REGULATOR OF TWO-COMPONENT SYSTEMcoord: 10..49
score: 8.4E-91coord: 73..191
score: 8.4
NoneNo IPR availablePANTHERPTHR26402:SF574SUBFAMILY NOT NAMEDcoord: 10..49
score: 8.4E-91coord: 73..191
score: 8.4