Cp4.1LG01g07570 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g07570
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPlastid movement impaired protein
LocationCp4.1LG01 : 5378725 .. 5380044 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTGTCTCTTCTACTACGCCCACCATCTTCCTCTTCCCTCTTTCCAGCTCTTTCCCTTTTGGCTGCCATGGGAAACACCTTTGGGCTCAAGAAGACGGTTAAGGTGATGACGGTCTCCGGTGACACGATCAAACTAACCCCCCCGGTTCAAGCTCGGGATGTCGTCAAGGACTATCCCGGCTTCGTTTTACTCGAATCTGAGGCTGTGAAACACTACGGAGTTCGAGCAAAGCCATTGGAACTCCACCAGAAGCTTAGCACGAAAAGACTCTATTTTCTTGTGGAGCTGCCTAAAGTTCCAAAAGAACAGGTGAGAGTAACGATATTAGAGATGTTTGTTTAACACACGATGAACAAGAAAAAAAAAAAGTGGGGAGAGATTTCTCCCAGTTTATTCAGCTGGGTTGGGGACGGAAATTATATTCTCTATTCCACTCTGTAGTTATTTGAGTTACATTAGTTATGATTTATTTTGACATGAAGGCTCCACGGCGAGTACGGTCGGCGATCAACATGAGTGCGAAGGATAGGCTAGAGAGCTTGATGTTGTCACGGCGGTCAGCATCGGACCTAACTATCATGAAACCGAAGAGCGTGTTGGCAGAGGAGGGCGGTGAACAGAGAGAGGGATCGGAAGCGACACGGGTGAAGGTACGGCTGCCGAAGGCGGAGGTGGAAAGGGTGTTGAAGGAGAGCAAAGATGAGGCAGAGGCAGCGGAGAGGATTATGGGGTTGTACATGGCCAAAGCTAGAGAAAGTGTTTGTCAAAATGAAAAGACGATGGAGAAGGAGAAGGATGTCATGATCAAGCCACGTGAGGTGCGCATGCACTGTCTTTTTTCTTTTTCTTTTTTAATTTAATTTTACTTGTCACTTCCATTTGTCATTAAGATTTACTAATTATTTTCGATGATAAAATTGAAATGATTTTCTTGGTTGAAAATGCAGAAGCGACGAGTAAGTTTCATGACGACAATAGAAGCAATGCCTCAAATTGCGGTAGCAACTTAATTAACAAGGGCAACAAAAATCATAGACAAATTAATTGAAGTGACACAGTGACGTGACGATCTACTGAGAGTATTACGTTACGTCCTTCATTTCAACTTAAAACATTTGAATTTTGAACCGCTTTTGTAGAATATAGCTAGATATAGTTTCGTTTTTTTTTTTACGTCCATTATGTACTCATAAATAAATTAATGTTATATAAGTAGCTAGCTCCCGAGTCATGGAGAGCTTTTTTTAGCTCAATATATATAGTTTAATGTTTCACATTATATATTAATATAATTTTTACTTTATATGGGTCAAAGATAT

mRNA sequence

TGTGTCTCTTCTACTACGCCCACCATCTTCCTCTTCCCTCTTTCCAGCTCTTTCCCTTTTGGCTGCCATGGGAAACACCTTTGGGCTCAAGAAGACGGTTAAGGTGATGACGGTCTCCGGTGACACGATCAAACTAACCCCCCCGGTTCAAGCTCGGGATGTCGTCAAGGACTATCCCGGCTTCGTTTTACTCGAATCTGAGGCTGTGAAACACTACGGAGTTCGAGCAAAGCCATTGGAACTCCACCAGAAGCTTAGCACGAAAAGACTCTATTTTCTTGTGGAGCTGCCTAAAGTTCCAAAAGAACAGGATAGGCTAGAGAGCTTGATGTTGTCACGGCGGTCAGCATCGGACCTAACTATCATGAAACCGAAGAGCGTGTTGGCAGAGGAGGGCGGTGAACAGAGAGAGGGATCGGAAGCGACACGGGTGAAGGTACGGCTGCCGAAGGCGGAGGTGGAAAGGGTGTTGAAGGAGAGCAAAGATGAGGCAGAGGCAGCGGAGAGGATTATGGGGTTGTACATGGCCAAAGCTAGAGAAAGTGTTTGTCAAAATGAAAAGACGATGGAGAAGGAGAAGGATGTCATGATCAAGCCACGTGAGAAGCGACGAGTAAGTTTCATGACGACAATAGAAGCAATGCCTCAAATTGCGGTAGCAACTTAATTAACAAGGGCAACAAAAATCATAGACAAATTAATTGAAGTGACACAGTGACGTGACGATCTACTGAGAGTATTACGTTACGTCCTTCATTTCAACTTAAAACATTTGAATTTTGAACCGCTTTTGTAGAATATAGCTAGATATAGTTTCGTTTTTTTTTTTACGTCCATTATGTACTCATAAATAAATTAATGTTATATAAGTAGCTAGCTCCCGAGTCATGGAGAGCTTTTTTTAGCTCAATATATATAGTTTAATGTTTCACATTATATATTAATATAATTTTTACTTTATATGGGTCAAAGATAT

Coding sequence (CDS)

ATGGGAAACACCTTTGGGCTCAAGAAGACGGTTAAGGTGATGACGGTCTCCGGTGACACGATCAAACTAACCCCCCCGGTTCAAGCTCGGGATGTCGTCAAGGACTATCCCGGCTTCGTTTTACTCGAATCTGAGGCTGTGAAACACTACGGAGTTCGAGCAAAGCCATTGGAACTCCACCAGAAGCTTAGCACGAAAAGACTCTATTTTCTTGTGGAGCTGCCTAAAGTTCCAAAAGAACAGGATAGGCTAGAGAGCTTGATGTTGTCACGGCGGTCAGCATCGGACCTAACTATCATGAAACCGAAGAGCGTGTTGGCAGAGGAGGGCGGTGAACAGAGAGAGGGATCGGAAGCGACACGGGTGAAGGTACGGCTGCCGAAGGCGGAGGTGGAAAGGGTGTTGAAGGAGAGCAAAGATGAGGCAGAGGCAGCGGAGAGGATTATGGGGTTGTACATGGCCAAAGCTAGAGAAAGTGTTTGTCAAAATGAAAAGACGATGGAGAAGGAGAAGGATGTCATGATCAAGCCACGTGAGAAGCGACGAGTAAGTTTCATGACGACAATAGAAGCAATGCCTCAAATTGCGGTAGCAACTTAA

Protein sequence

MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELHQKLSTKRLYFLVELPKVPKEQDRLESLMLSRRSASDLTIMKPKSVLAEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNEKTMEKEKDVMIKPREKRRVSFMTTIEAMPQIAVAT
Homology
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BLAST of Cp4.1LG01g07570 vs. Swiss-Prot
Match: Y1648_ARATH (Uncharacterized protein At1g66480 OS=Arabidopsis thaliana GN=At1g66480 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.6e-28
Identity = 76/183 (41.53%), Postives = 116/183 (63.39%), Query Frame = 1 

Query: 1   MGNTFGLK-KTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLEL 60
           MGN+  +K K  KVM + G+T ++  PV AR+V  DYPG+VLL+S+AVKH+GVR+KPLE 
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 61  HQKLSTKRLYFLVELPKVPKE-----------------------QDRLESLMLSRRSASD 120
           +Q L  K+ YFLVELPK+P E                       ++RL+ LMLSRR+ SD
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 121 LTIMKPKSVLAEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEA-AERIMGLYMAK 159
           +TI +       +G     G   T V++RLP++++ ++++E+ ++A A AE+I+G+YM +
Sbjct: 121 VTIGRSD---GGDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKILGIYMER 180

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BLAST of Cp4.1LG01g07570 vs. TrEMBL
Match: B9HW76_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12400g PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 4.2e-47
Identity = 124/220 (56.36%), Postives = 145/220 (65.91%), Query Frame = 1 

Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN+ G KKT KVM +SG+T K   PV+A +VVKDYPG VLLESEAVKHYG+RAKPLE H
Sbjct: 1   MGNSLGWKKTAKVMKISGETFKFKTPVKAGEVVKDYPGHVLLESEAVKHYGIRAKPLEAH 60

Query: 61  QKLSTKRLYFLVELPKVPKE--------------QDRLESLMLSRRSASDLTIMKPKSVL 120
           Q L  KRLYFLVELPK P E              +DRLESLMLSRRS SDL+IMKP S+ 
Sbjct: 61  QDLVPKRLYFLVELPKTPTEKVPRRVRSGINMSAKDRLESLMLSRRSTSDLSIMKPASIE 120

Query: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNEKT 180
           AEE       S A RVK+RLPKAEVE++++ESKDE EAA +I+ L MA   ES    ++ 
Sbjct: 121 AEEA-----KSGAMRVKMRLPKAEVEKLMQESKDETEAAAKIVDLCMANTAESALLQQQV 180

Query: 181 MEK-------EKDVMIKPREKRRVSFMTTIEAMPQIAVAT 200
             K           +IK REK RVSF+   E   QIAVA+
Sbjct: 181 HWKSAGHGRVSSQGIIKAREK-RVSFLPVNEGETQIAVAS 214

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BLAST of Cp4.1LG01g07570 vs. TrEMBL
Match: A0A061E984_THECC (Encodes a protein whose expression is responsive to nematode infection, putative OS=Theobroma cacao GN=TCM_047008 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.1e-46
Identity = 121/228 (53.07%), Postives = 149/228 (65.35%), Query Frame = 1 

Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN+ G KKT KVM ++G+T KL  PV+A +VVKDYPG VLLESE+VKH+G+RAKPL+ H
Sbjct: 1   MGNSLGGKKTTKVMKINGETFKLKTPVKAEEVVKDYPGHVLLESESVKHFGIRAKPLQSH 60

Query: 61  QKLSTKRLYFLVELPKVPKE--------------QDRLESLMLSRRSASDLTIMKPKSVL 120
           Q L  KRLYFLVELP+ PKE              +DRLESLMLSRRS SDLT+MKPK V+
Sbjct: 61  QSLEPKRLYFLVELPEAPKEIVTRRVRSGINMSAKDRLESLMLSRRSVSDLTLMKPKCVI 120

Query: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKA----RESVCQ 180
            EE  E+   S A RVK+RLP+AEVER++KES +EAEAAE+IM L +A      RE+  +
Sbjct: 121 PEESEEEGSESGAMRVKMRLPRAEVERLMKESNNEAEAAEKIMQLCVANTRNSPREAAQK 180

Query: 181 NEKTMEKEKDV-----------MIKPREKRRVSFMTTIEAMPQIAVAT 200
               +  ++ V             K REK RVSF    E   QIAV +
Sbjct: 181 GNGRLSLQQQVHWKGSHGRVGERFKAREK-RVSFTPISEGGSQIAVTS 227

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BLAST of Cp4.1LG01g07570 vs. TrEMBL
Match: B9HJA1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s12770g PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-44
Identity = 120/220 (54.55%), Postives = 146/220 (66.36%), Query Frame = 1 

Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNT G KKT KVM ++G+T K   PV+A DVVKDYPG VLLESEAVKHYG+RAKPLE H
Sbjct: 1   MGNTLGGKKTAKVMKINGETFKFKTPVKAGDVVKDYPGHVLLESEAVKHYGIRAKPLEAH 60

Query: 61  QKLSTKRLYFLVELPKVPKE--------------QDRLESLMLSRRSASDLTIMKPKSVL 120
           Q L  KRLYFLVELP+ P E              +DRLESLMLSRRS SDL+IMKP S++
Sbjct: 61  QDLVPKRLYFLVELPETPTERVPRRVRSGINMSAKDRLESLMLSRRSTSDLSIMKPSSIV 120

Query: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNEKT 180
           +EE    + G  A RVK+RLPK +VE++++ESKDEAEAA +I+ L MA        +++ 
Sbjct: 121 SEEA---KRG--AMRVKMRLPKEQVEKLMQESKDEAEAAAKILDLCMANTAGESGLSQQV 180

Query: 181 MEKE-------KDVMIKPREKRRVSFMTTIEAMPQIAVAT 200
             K           +IK REK RVSF+   E   QIAVA+
Sbjct: 181 HWKSGGHGRVGNQGIIKAREK-RVSFLPFSEGEMQIAVAS 214

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BLAST of Cp4.1LG01g07570 vs. TrEMBL
Match: V7CKB4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G092800g PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.5e-44
Identity = 114/217 (52.53%), Postives = 149/217 (68.66%), Query Frame = 1 

Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFG KKT KVM + G+T KL  PV+  +V+KD+PG VLL+SEAVKHYGVRAKPLE H
Sbjct: 1   MGNTFGAKKTTKVMKIDGETFKLKTPVKVEEVLKDHPGLVLLDSEAVKHYGVRAKPLEAH 60

Query: 61  QKLSTKRLYFLVELPKVPK-----------EQDRLESLMLSRRSASDLTIMKPKSVL-AE 120
           ++L  KRLYFLVELPK  K            +DRLE+L+L+RRSASDL+IMK  ++   E
Sbjct: 61  KELHPKRLYFLVELPKEIKPRRVRSGINMSAKDRLENLVLTRRSASDLSIMKQSNMSDGE 120

Query: 121 EGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAK-ARESVCQNEKTM 180
           +G  +   +   R+K+RLPKAEVE++++ SKD+AEAAERI+ LYMA  +RE+    EK M
Sbjct: 121 QGNNKENNNGGVRLKMRLPKAEVEKLIQGSKDQAEAAERIVKLYMANGSRETEENGEKMM 180

Query: 181 -----EKEKDVMIKPREKRRVSFMTTIEAMPQIAVAT 200
                ++ K   +K   K+RVSFM   E   Q+AV +
Sbjct: 181 LFDQQKQCKGDTVKESTKKRVSFMAMNEGGTQVAVVS 217

[Close]
BLAST of Cp4.1LG01g07570 vs. TrEMBL
Match: I1KM33_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G216400 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.3e-43
Identity = 115/214 (53.74%), Postives = 147/214 (68.69%), Query Frame = 1 

Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFG KKT KVM + G+T KL  PV+ R+V+KD+PG VLL+SEAVKHYGVRAKPLE H
Sbjct: 1   MGNTFGAKKTTKVMKIDGETFKLKTPVKVREVLKDHPGLVLLDSEAVKHYGVRAKPLEAH 60

Query: 61  QKLSTKRLYFLVELPKVPK-----------EQDRLESLMLSRRSASDLTIMKPKSVLAEE 120
           ++L  KRLYFLVELPK  K            +DRLESL+L+RRSASDL+IMK  + +  +
Sbjct: 61  KELQPKRLYFLVELPKETKPRRVRSGINMSAKDRLESLVLTRRSASDLSIMKQSNNM--D 120

Query: 121 GGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAK-ARES---VCQNEK 180
             E   G    R+K+RLPKAEVE++++  KDEAEAAERIM LYMA  +RE+     +N +
Sbjct: 121 NNENNGG--GVRLKMRLPKAEVEKLIQGCKDEAEAAERIMKLYMANGSRENEGGTKENGE 180

Query: 181 TMEKEKDVMIKPREKRRVSFMTTIEAMPQIAVAT 200
            M   +   +K   K+RVSFM   E   ++AVA+
Sbjct: 181 KMVVLEQQRVKESTKKRVSFMPINEGGIEVAVAS 210

[Close]
BLAST of Cp4.1LG01g07570 vs. TAIR10
Match: AT2G01340.1 (AT2G01340.1 Encodes a protein whose expression is responsive to nematode infection.)

HSP 1 Score: 153.3 bits (386), Expect = 1.6e-37
Identity = 107/223 (47.98%), Postives = 137/223 (61.43%), Query Frame = 1 

Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN+ G KKT KVM + G+T KL  PV A +V+KD+PG VLL+SE+VKHYG RAKPLE  
Sbjct: 1   MGNSLGGKKTTKVMKIDGETFKLKTPVTAEEVLKDFPGHVLLDSESVKHYGARAKPLEAK 60

Query: 61  QKLSTKRLYFLVELPK--VPKE---------QDRLESLMLSRRSASDLTIMKPKSVLAEE 120
           Q+L  KRLYF+VE  K   P+          ++RLESLML+RRS+SDL+I+KP       
Sbjct: 61  QRLEAKRLYFVVEPVKECPPRRVRSGIHVSAKERLESLMLARRSSSDLSILKP------P 120

Query: 121 GG---EQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKAR-ESVCQNEK 180
           GG   E+ EG+   RVKVR+PKAE+E+++KE   EAEA ++I  L+MAK R E   QN +
Sbjct: 121 GGWTTEEEEGA-VRRVKVRIPKAELEKLVKEGATEAEATQKIAALFMAKQRQEEAYQNTR 180

Query: 181 TMEKEKDVM----------IKPREKRRVSFMTTIEAMPQIAVA 199
             E                +K R K RVSFM       +I VA
Sbjct: 181 QDEPATTATATATTTATRGVKSRLK-RVSFMAERGGGSEITVA 215

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BLAST of Cp4.1LG01g07570 vs. TAIR10
Match: AT1G71015.1 (AT1G71015.1 unknown protein)

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-32
Identity = 80/165 (48.48%), Postives = 112/165 (67.88%), Query Frame = 1 

Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN+ G KKT  +M ++G++ KL  PV+A  VVKD+PG VLLESEAVK  G+RAKPLE H
Sbjct: 1   MGNSLGTKKTATIMNINGESFKLKTPVEAGTVVKDFPGHVLLESEAVKRLGIRAKPLEPH 60

Query: 61  QKLSTKRLYFLVELPKVPKE--------------QDRLESLMLSRRSASDLTIMKPKSVL 120
           Q L +KR+YF+VELP+  KE              ++RLE+L LSRRS+SDL++MK K+  
Sbjct: 61  QNLESKRIYFMVELPRTWKERTPRRVRSGIQMSAKERLENLKLSRRSSSDLSVMKKKT-- 120

Query: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGL 152
            E   E+RE S    VK++LPK ++E++ KES+  ++ + +I  L
Sbjct: 121 -EVNDEEREVSS---VKLKLPKWKIEKLRKESESGSDFSNKITQL 159

[Close]
BLAST of Cp4.1LG01g07570 vs. TAIR10
Match: AT1G66480.1 (AT1G66480.1 plastid movement impaired 2)

HSP 1 Score: 127.5 bits (319), Expect = 9.3e-30
Identity = 76/183 (41.53%), Postives = 116/183 (63.39%), Query Frame = 1 

Query: 1   MGNTFGLK-KTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLEL 60
           MGN+  +K K  KVM + G+T ++  PV AR+V  DYPG+VLL+S+AVKH+GVR+KPLE 
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 61  HQKLSTKRLYFLVELPKVPKE-----------------------QDRLESLMLSRRSASD 120
           +Q L  K+ YFLVELPK+P E                       ++RL+ LMLSRR+ SD
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 121 LTIMKPKSVLAEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEA-AERIMGLYMAK 159
           +TI +       +G     G   T V++RLP++++ ++++E+ ++A A AE+I+G+YM +
Sbjct: 121 VTIGRSD---GGDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKILGIYMER 180

[Close]
BLAST of Cp4.1LG01g07570 vs. TAIR10
Match: AT5G37840.1 (AT5G37840.1 BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1))

HSP 1 Score: 114.8 bits (286), Expect = 6.2e-26
Identity = 73/171 (42.69%), Postives = 102/171 (59.65%), Query Frame = 1 

Query: 1   MGNTFGLKKT-VKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLEL 60
           MGNT  +++  VKVM + GD  +L  PV A D  K+YPGFVLL+SE VK  GVRAKPLE 
Sbjct: 1   MGNTIMVRRNKVKVMKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAKPLEP 60

Query: 61  HQKLSTKRLYFLVELPKVPKE-----------------QDRLESLMLSRRSASDLTIMKP 120
           +Q L     YFLV+LP V K                  ++RLE LMLSRR+ SD  +   
Sbjct: 61  NQILKPNHTYFLVDLPPVDKRNKLPYRRVMSGNIHVGAKERLEMLMLSRRTVSD--VGAA 120

Query: 121 KSVLAEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYM 154
           +S +  +G E       TRV++RLP++++ ++++ES D +E A +I+  YM
Sbjct: 121 RSDVVGDGPELGH----TRVRLRLPRSQITKLMEESHDASEVAAKIISAYM 165

[Close]
BLAST of Cp4.1LG01g07570 vs. NCBI nr
Match: gi|659109564|ref|XP_008454773.1| (PREDICTED: uncharacterized protein At1g66480 isoform X2 [Cucumis melo])

HSP 1 Score: 285.8 bits (730), Expect = 5.8e-74
Identity = 165/215 (76.74%), Postives = 179/215 (83.26%), Query Frame = 1 

Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFG+KKTVKVM +SG+T+KL  PVQ  DVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNTFGVKKTVKVMKISGETLKLNTPVQVGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQ--------------DRLESLMLSRRSASDLTIMKPKSVL 120
           QKLSTKRLYFLV+LPK+PKEQ              DRLESLML+RRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVDLPKLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120

Query: 121 AEEGGEQRE--GSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNE 180
            EEGG + E  GS ATRVKVRLPKAEVER+LKE KDEAEAAERIMGLY  K RESVC+N+
Sbjct: 121 TEEGGGESEGSGSGATRVKVRLPKAEVERLLKECKDEAEAAERIMGLY--KTRESVCEND 180

Query: 181 KTMEKEKDVMIKPREKRRVSFMTTIEAMPQIAVAT 200
              EKEK  +IKPREKRRVSFMTT+EA  QIAVA+
Sbjct: 181 H-KEKEKKDIIKPREKRRVSFMTTMEAGTQIAVAS 212

[Close]
BLAST of Cp4.1LG01g07570 vs. NCBI nr
Match: gi|659109562|ref|XP_008454771.1| (PREDICTED: uncharacterized protein At1g66480 isoform X1 [Cucumis melo])

HSP 1 Score: 281.2 bits (718), Expect = 1.4e-72
Identity = 165/216 (76.39%), Postives = 179/216 (82.87%), Query Frame = 1 

Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFG+KKTVKVM +SG+T+KL  PVQ  DVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNTFGVKKTVKVMKISGETLKLNTPVQVGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQ--------------DRLESLMLSRRSASDLTIMKPKSVL 120
           QKLSTKRLYFLV+LPK+PKEQ              DRLESLML+RRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVDLPKLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120

Query: 121 AEEGGEQRE--GSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNE 180
            EEGG + E  GS ATRVKVRLPKAEVER+LKE KDEAEAAERIMGLY  K RESVC+N+
Sbjct: 121 TEEGGGESEGSGSGATRVKVRLPKAEVERLLKECKDEAEAAERIMGLY--KTRESVCEND 180

Query: 181 KTMEKEKDVMIKPRE-KRRVSFMTTIEAMPQIAVAT 200
              EKEK  +IKPRE KRRVSFMTT+EA  QIAVA+
Sbjct: 181 H-KEKEKKDIIKPREKKRRVSFMTTMEAGTQIAVAS 213

[Close]
BLAST of Cp4.1LG01g07570 vs. NCBI nr
Match: gi|449445353|ref|XP_004140437.1| (PREDICTED: uncharacterized protein At1g66480 [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 7.3e-69
Identity = 156/217 (71.89%), Postives = 176/217 (81.11%), Query Frame = 1 

Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFG+KKTVKVM +SG+T+KL  PVQA DVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNTFGVKKTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQ--------------DRLESLMLSRRSASDLTIMKPKSVL 120
           QKLSTKRLYFLV+LP++PKEQ              DRLESLML+RRSASDLTIMKPKS+L
Sbjct: 61  QKLSTKRLYFLVDLPRLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSML 120

Query: 121 AEE-GGEQREGSEA---TRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQ 180
            EE GGE  EGS +   TRVK+RLPKAEVER+LKE KDEAEAAERIMGLY  K RE+  +
Sbjct: 121 TEEGGGESEEGSVSGAPTRVKMRLPKAEVERLLKECKDEAEAAERIMGLY--KTRENAYE 180

Query: 181 NEKTMEKEKDVMIKPREKRRVSFMTTIEAMPQIAVAT 200
           N+   ++ K  +IKPREKRRVSFMTT+E   QIAVA+
Sbjct: 181 NDHKEKEIKKDIIKPREKRRVSFMTTMEGGTQIAVAS 215

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BLAST of Cp4.1LG01g07570 vs. NCBI nr
Match: gi|224111518|ref|XP_002315887.1| (hypothetical protein POPTR_0010s12400g [Populus trichocarpa])

HSP 1 Score: 196.1 bits (497), Expect = 6.0e-47
Identity = 124/220 (56.36%), Postives = 145/220 (65.91%), Query Frame = 1 

Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN+ G KKT KVM +SG+T K   PV+A +VVKDYPG VLLESEAVKHYG+RAKPLE H
Sbjct: 1   MGNSLGWKKTAKVMKISGETFKFKTPVKAGEVVKDYPGHVLLESEAVKHYGIRAKPLEAH 60

Query: 61  QKLSTKRLYFLVELPKVPKE--------------QDRLESLMLSRRSASDLTIMKPKSVL 120
           Q L  KRLYFLVELPK P E              +DRLESLMLSRRS SDL+IMKP S+ 
Sbjct: 61  QDLVPKRLYFLVELPKTPTEKVPRRVRSGINMSAKDRLESLMLSRRSTSDLSIMKPASIE 120

Query: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNEKT 180
           AEE       S A RVK+RLPKAEVE++++ESKDE EAA +I+ L MA   ES    ++ 
Sbjct: 121 AEEA-----KSGAMRVKMRLPKAEVEKLMQESKDETEAAAKIVDLCMANTAESALLQQQV 180

Query: 181 MEK-------EKDVMIKPREKRRVSFMTTIEAMPQIAVAT 200
             K           +IK REK RVSF+   E   QIAVA+
Sbjct: 181 HWKSAGHGRVSSQGIIKAREK-RVSFLPVNEGETQIAVAS 214

[Close]
BLAST of Cp4.1LG01g07570 vs. NCBI nr
Match: gi|590696217|ref|XP_007045105.1| (Encodes a protein whose expression is responsive to nematode infection, putative [Theobroma cacao])

HSP 1 Score: 193.7 bits (491), Expect = 3.0e-46
Identity = 121/228 (53.07%), Postives = 149/228 (65.35%), Query Frame = 1 

Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN+ G KKT KVM ++G+T KL  PV+A +VVKDYPG VLLESE+VKH+G+RAKPL+ H
Sbjct: 1   MGNSLGGKKTTKVMKINGETFKLKTPVKAEEVVKDYPGHVLLESESVKHFGIRAKPLQSH 60

Query: 61  QKLSTKRLYFLVELPKVPKE--------------QDRLESLMLSRRSASDLTIMKPKSVL 120
           Q L  KRLYFLVELP+ PKE              +DRLESLMLSRRS SDLT+MKPK V+
Sbjct: 61  QSLEPKRLYFLVELPEAPKEIVTRRVRSGINMSAKDRLESLMLSRRSVSDLTLMKPKCVI 120

Query: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKA----RESVCQ 180
            EE  E+   S A RVK+RLP+AEVER++KES +EAEAAE+IM L +A      RE+  +
Sbjct: 121 PEESEEEGSESGAMRVKMRLPRAEVERLMKESNNEAEAAEKIMQLCVANTRNSPREAAQK 180

Query: 181 NEKTMEKEKDV-----------MIKPREKRRVSFMTTIEAMPQIAVAT 200
               +  ++ V             K REK RVSF    E   QIAV +
Sbjct: 181 GNGRLSLQQQVHWKGSHGRVGERFKAREK-RVSFTPISEGGSQIAVTS 227

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g07570 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y1648_ARATH1.6e-2841.53Uncharacterized protein At1g66480 OS=Arabidopsis thaliana GN=At1g66480 PE=2 SV=1[more]
BLAST of Cp4.1LG01g07570 vs. TrEMBL
Match NameE-valueIdentityDescription
B9HW76_POPTR4.2e-4756.36Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12400g PE=4 SV=1[more]
A0A061E984_THECC2.1e-4653.07Encodes a protein whose expression is responsive to nematode infection, putative... [more]
B9HJA1_POPTR1.1e-4454.55Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s12770g PE=4 SV=1[more]
V7CKB4_PHAVU1.5e-4452.53Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G092800g PE=4 SV=1[more]
I1KM33_SOYBN1.3e-4353.74Uncharacterized protein OS=Glycine max GN=GLYMA_07G216400 PE=4 SV=1[more]
BLAST of Cp4.1LG01g07570 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G01340.11.6e-3747.98 Encodes a protein whose expression is responsive to nematode infecti... [more]
AT1G71015.12.0e-3248.48 unknown protein[more]
AT1G66480.19.3e-3041.53 plastid movement impaired 2[more]
AT5G37840.16.2e-2642.69 BEST Arabidopsis thaliana protein match is: plastid movement impaire... [more]
BLAST of Cp4.1LG01g07570 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659109564|ref|XP_008454773.1|5.8e-7476.74PREDICTED: uncharacterized protein At1g66480 isoform X2 [Cucumis melo][more]
gi|659109562|ref|XP_008454771.1|1.4e-7276.39PREDICTED: uncharacterized protein At1g66480 isoform X1 [Cucumis melo][more]
gi|449445353|ref|XP_004140437.1|7.3e-6971.89PREDICTED: uncharacterized protein At1g66480 [Cucumis sativus][more]
gi|224111518|ref|XP_002315887.1|6.0e-4756.36hypothetical protein POPTR_0010s12400g [Populus trichocarpa][more]
gi|590696217|ref|XP_007045105.1|3.0e-4653.07Encodes a protein whose expression is responsive to nematode infection, putative... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025322DUF4228_plant
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g07570.1Cp4.1LG01g07570.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025322Protein of unknown function DUF4228, plantPFAMPF14009DUF4228coord: 1..158
score: 1.4
NoneNo IPR availableunknownCoilCoilcoord: 128..148
scor
NoneNo IPR availablePANTHERPTHR33148FAMILY NOT NAMEDcoord: 2..195
score: 1.0
NoneNo IPR availablePANTHERPTHR33148:SF3SUBFAMILY NOT NAMEDcoord: 2..195
score: 1.0