ClCG07G006320 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG07G006320
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Encodes a protein whose expression is responsive to nematode infection. LENGTH=215
Location	CG_Chr07 : 10961167 .. 10961926 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAACACCTTTGGAGTCAAGAAAACGGTTAAGGTGATGAACATCTCCGGCGAGACGATGAAACTAAACACCCCGGTTCAAGCCGGAGACGTTGTCAAGGATTATCCCGGCTTTGTTCTACTCGAATCCGAGGCCGTGAAGCACTACGGAGCTCGAGCAAAGCCATTGGAGCTACACCAAAAGCTCAGCACGAACAGACTTTATTTCCTCGTAGAGCTGCCTAAAGCTTCAAAAGAACAGGTGTGAAACTAAACAACTTAAGCTCATAGGTTACGTTTTTCGAACTTGATAATTAGCGTCGAGACTGACAAATAGTTGTTAGTGACATCATAAACTACTTATCTTTTGCTTTAATACCATGTAAATTTAATTTAATGTTATATTAGCACTATTCTTTTTAACATAGGCTCCACGACGAGTACGGTCCGCGATCAACATGAGCGCGAAGGATAGGCTAGAGAGCTTGATGTTGGCACGACGGTCTGCTTCGGACCTGACTATCATGAAACCGAAGAGTGTGTTGGCTGAGGAGGGTGGTGGAGAGAGTGAGGGATCGGGATCGGGATCGGGATCGAGATCAGGAGCGACACGGGTGAAGATACGGTTGCCAAAGGCCGAGGTGGAAAGGCTGTTGAAGGAGAGCAAAGATGAGGCAGAGGCTGCAGAAAGGATTATGGGATTGTACAAAACAAGAGGAGATGTTTGTGGAAATGATCACAGGGAGAAGGAGAAGAAGGATAGCATCAAGCCACGTGAG

mRNA sequence

ATGGGAAACACCTTTGGAGTCAAGAAAACGGTTAAGGTGATGAACATCTCCGGCGAGACGATGAAACTAAACACCCCGGTTCAAGCCGGAGACGTTGTCAAGGATTATCCCGGCTTTGTTCTACTCGAATCCGAGGCCGTGAAGCACTACGGAGCTCGAGCAAAGCCATTGGAGCTACACCAAAAGCTCAGCACGAACAGACTTTATTTCCTCGTAGAGCTGCCTAAAGCTTCAAAAGAACAGGCTCCACGACGAGTACGGTCCGCGATCAACATGAGCGCGAAGGATAGGCTAGAGAGCTTGATGTTGGCACGACGGTCTGCTTCGGACCTGACTATCATGAAACCGAAGAGTGTGTTGGCTGAGGAGGGTGGTGGAGAGAGTGAGGGATCGGGATCGGGATCGGGATCGAGATCAGGAGCGACACGGGTGAAGATACGGTTGCCAAAGGCCGAGGTGGAAAGGCTGTTGAAGGAGAGCAAAGATGAGGCAGAGGCTGCAGAAAGGATTATGGGATTGTACAAAACAAGAGGAGATGTTTGTGGAAATGATCACAGGGAGAAGGAGAAGAAGGATAGCATCAAGCCACGTGAG

Coding sequence (CDS)

ATGGGAAACACCTTTGGAGTCAAGAAAACGGTTAAGGTGATGAACATCTCCGGCGAGACGATGAAACTAAACACCCCGGTTCAAGCCGGAGACGTTGTCAAGGATTATCCCGGCTTTGTTCTACTCGAATCCGAGGCCGTGAAGCACTACGGAGCTCGAGCAAAGCCATTGGAGCTACACCAAAAGCTCAGCACGAACAGACTTTATTTCCTCGTAGAGCTGCCTAAAGCTTCAAAAGAACAGGCTCCACGACGAGTACGGTCCGCGATCAACATGAGCGCGAAGGATAGGCTAGAGAGCTTGATGTTGGCACGACGGTCTGCTTCGGACCTGACTATCATGAAACCGAAGAGTGTGTTGGCTGAGGAGGGTGGTGGAGAGAGTGAGGGATCGGGATCGGGATCGGGATCGAGATCAGGAGCGACACGGGTGAAGATACGGTTGCCAAAGGCCGAGGTGGAAAGGCTGTTGAAGGAGAGCAAAGATGAGGCAGAGGCTGCAGAAAGGATTATGGGATTGTACAAAACAAGAGGAGATGTTTGTGGAAATGATCACAGGGAGAAGGAGAAGAAGGATAGCATCAAGCCACGTGAG

Protein sequence

MGNTFGVKKTVKVMNISGETMKLNTPVQAGDVVKDYPGFVLLESEAVKHYGARAKPLELHQKLSTNRLYFLVELPKASKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVLAEEGGGESEGSGSGSGSRSGATRVKIRLPKAEVERLLKESKDEAEAAERIMGLYKTRGDVCGNDHREKEKKDSIKPRE

Homology

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BLAST of ClCG07G006320 vs. Swiss-Prot
Match: Y1648_ARATH (Uncharacterized protein At1g66480 OS=Arabidopsis thaliana GN=At1g66480 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.8e-36
Identity = 93/214 (43.46%), Postives = 125/214 (58.41%), Query Frame = 1


Query: 1   MGNTFGVK-KTVKVMNISGETMKLNTPVQAGDVVKDYPGFVLLESEAVKHYGARAKPLEL 60
           MGN+  VK K  KVM I GET ++ TPV A +V  DYPG+VLL+S+AVKH+G R+KPLE 
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 61  HQKLSTNRLYFLVELPKASKEQAP---------RRVRSAINMSAKDRLESLMLARRSASD 120
           +Q L   + YFLVELPK   E            RRV S I++ AK+RL+ LML+RR+ SD
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 121 LTIMKPKSVLAEEGGGESEGSGSGSGSRSGATRVKIRLPKAEVERLLKESKDEAEA-AER 180
           +TI           G    G G G     G T V++RLP++++ +L++E+ ++A A AE+
Sbjct: 121 VTI-----------GRSDGGDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEK 180

Query: 181 IMGLYKTR-----GDVCGNDHREKEKKDSIKPRE 199
           I+G+Y  R     G   G D R +     IK RE
Sbjct: 181 ILGIYMERSGELGGGRGGVDGRRELGSGEIKARE 203

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BLAST of ClCG07G006320 vs. TrEMBL
Match: A0A061E984_THECC (Encodes a protein whose expression is responsive to nematode infection, putative OS=Theobroma cacao GN=TCM_047008 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.4e-55
Identity = 120/173 (69.36%), Postives = 136/173 (78.61%), Query Frame = 1


Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPVQAGDVVKDYPGFVLLESEAVKHYGARAKPLELH 60
           MGN+ G KKT KVM I+GET KL TPV+A +VVKDYPG VLLESE+VKH+G RAKPL+ H
Sbjct: 1   MGNSLGGKKTTKVMKINGETFKLKTPVKAEEVVKDYPGHVLLESESVKHFGIRAKPLQSH 60

Query: 61  QKLSTNRLYFLVELPKASKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           Q L   RLYFLVELP+A KE   RRVRS INMSAKDRLESLML+RRS SDLT+MKPK V+
Sbjct: 61  QSLEPKRLYFLVELPEAPKEIVTRRVRSGINMSAKDRLESLMLSRRSVSDLTLMKPKCVI 120

Query: 121 AEEGGGESEGSGSGSGSRSGATRVKIRLPKAEVERLLKESKDEAEAAERIMGL 174
            EE   E        GS SGA RVK+RLP+AEVERL+KES +EAEAAE+IM L
Sbjct: 121 PEESEEE--------GSESGAMRVKMRLPRAEVERLMKESNNEAEAAEKIMQL 165

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BLAST of ClCG07G006320 vs. TrEMBL
Match: A0A0D2PTY5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G162500 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.4e-55
Identity = 119/173 (68.79%), Postives = 135/173 (78.03%), Query Frame = 1


Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPVQAGDVVKDYPGFVLLESEAVKHYGARAKPLELH 60
           MGN+ G KK  KVM I+GETMKL TPV+A  VVKDYPG VLLESEAVKH+G RAKPL+ H
Sbjct: 1   MGNSLGGKKMTKVMKINGETMKLKTPVRAEQVVKDYPGHVLLESEAVKHFGIRAKPLQSH 60

Query: 61  QKLSTNRLYFLVELPKASKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           Q L   RLYFLVELP+A KE+ PRRVRS INMSAKDRLESLML+RRS SDLT+MKP   +
Sbjct: 61  QNLEPKRLYFLVELPEAPKERVPRRVRSGINMSAKDRLESLMLSRRSVSDLTLMKPIIAI 120

Query: 121 AEEGGGESEGSGSGSGSRSGATRVKIRLPKAEVERLLKESKDEAEAAERIMGL 174
            EE     E    G GS SGA RVK+RLPK++VERL+KES +E EAAE+IM L
Sbjct: 121 PEE-----ENEEEGGGSESGAMRVKMRLPKSQVERLIKESLNEREAAEKIMQL 168

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BLAST of ClCG07G006320 vs. TrEMBL
Match: B9HW76_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12400g PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.2e-55
Identity = 119/173 (68.79%), Postives = 134/173 (77.46%), Query Frame = 1


Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPVQAGDVVKDYPGFVLLESEAVKHYGARAKPLELH 60
           MGN+ G KKT KVM ISGET K  TPV+AG+VVKDYPG VLLESEAVKHYG RAKPLE H
Sbjct: 1   MGNSLGWKKTAKVMKISGETFKFKTPVKAGEVVKDYPGHVLLESEAVKHYGIRAKPLEAH 60

Query: 61  QKLSTNRLYFLVELPKASKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           Q L   RLYFLVELPK   E+ PRRVRS INMSAKDRLESLML+RRS SDL+IMKP S+ 
Sbjct: 61  QDLVPKRLYFLVELPKTPTEKVPRRVRSGINMSAKDRLESLMLSRRSTSDLSIMKPASIE 120

Query: 121 AEEGGGESEGSGSGSGSRSGATRVKIRLPKAEVERLLKESKDEAEAAERIMGL 174
           AEE             ++SGA RVK+RLPKAEVE+L++ESKDE EAA +I+ L
Sbjct: 121 AEE-------------AKSGAMRVKMRLPKAEVEKLMQESKDETEAAAKIVDL 160

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BLAST of ClCG07G006320 vs. TrEMBL
Match: B9HJA1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s12770g PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.2e-54
Identity = 116/173 (67.05%), Postives = 134/173 (77.46%), Query Frame = 1


Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPVQAGDVVKDYPGFVLLESEAVKHYGARAKPLELH 60
           MGNT G KKT KVM I+GET K  TPV+AGDVVKDYPG VLLESEAVKHYG RAKPLE H
Sbjct: 1   MGNTLGGKKTAKVMKINGETFKFKTPVKAGDVVKDYPGHVLLESEAVKHYGIRAKPLEAH 60

Query: 61  QKLSTNRLYFLVELPKASKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           Q L   RLYFLVELP+   E+ PRRVRS INMSAKDRLESLML+RRS SDL+IMKP S++
Sbjct: 61  QDLVPKRLYFLVELPETPTERVPRRVRSGINMSAKDRLESLMLSRRSTSDLSIMKPSSIV 120

Query: 121 AEEGGGESEGSGSGSGSRSGATRVKIRLPKAEVERLLKESKDEAEAAERIMGL 174
           +EE             ++ GA RVK+RLPK +VE+L++ESKDEAEAA +I+ L
Sbjct: 121 SEE-------------AKRGAMRVKMRLPKEQVEKLMQESKDEAEAAAKILDL 160

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BLAST of ClCG07G006320 vs. TrEMBL
Match: D7T8U4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04780 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.6e-54
Identity = 117/173 (67.63%), Postives = 135/173 (78.03%), Query Frame = 1


Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPVQAGDVVKDYPGFVLLESEAVKHYGARAKPLELH 60
           MGN+ G KK  KVM I GE +KL TPV AG+VVKDYPG VLLESEAVKH+G RAKPLE  
Sbjct: 1   MGNSLGGKKIAKVMKIDGEVIKLKTPVYAGEVVKDYPGHVLLESEAVKHFGIRAKPLESQ 60

Query: 61  QKLSTNRLYFLVELPKASKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           Q+L   RLYFLVELPK ++E+ PRRVRS INMSAKDRLESLML+RRS SDLTIMKP S++
Sbjct: 61  QELKPKRLYFLVELPKGAEEKVPRRVRSGINMSAKDRLESLMLSRRSVSDLTIMKPASIV 120

Query: 121 AEEGGGESEGSGSGSGSRSGATRVKIRLPKAEVERLLKESKDEAEAAERIMGL 174
            +E    SE         SG  R+K+RLPKAEVE+L++ESKDEAEAAE+IM L
Sbjct: 121 HQEPKEASE---------SGTVRMKMRLPKAEVEKLMRESKDEAEAAEKIMDL 164

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BLAST of ClCG07G006320 vs. TAIR10
Match: AT2G01340.1 (AT2G01340.1 Encodes a protein whose expression is responsive to nematode infection.)

HSP 1 Score: 181.8 bits (460), Expect = 4.1e-46
Identity = 101/177 (57.06%), Postives = 123/177 (69.49%), Query Frame = 1


Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPVQAGDVVKDYPGFVLLESEAVKHYGARAKPLELH 60
           MGN+ G KKT KVM I GET KL TPV A +V+KD+PG VLL+SE+VKHYGARAKPLE  
Sbjct: 1   MGNSLGGKKTTKVMKIDGETFKLKTPVTAEEVLKDFPGHVLLDSESVKHYGARAKPLEAK 60

Query: 61  QKLSTNRLYFLVELPKASKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           Q+L   RLYF+VE     KE  PRRVRS I++SAK+RLESLMLARRS+SDL+I+KP    
Sbjct: 61  QRLEAKRLYFVVE---PVKECPPRRVRSGIHVSAKERLESLMLARRSSSDLSILKPPGGW 120

Query: 121 AEEGGGESEGSGSGSGSRSGATRVKIRLPKAEVERLLKESKDEAEAAERIMGLYKTR 178
             E   E EG+           RVK+R+PKAE+E+L+KE   EAEA ++I  L+  +
Sbjct: 121 TTE---EEEGA---------VRRVKVRIPKAELEKLVKEGATEAEATQKIAALFMAK 162

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BLAST of ClCG07G006320 vs. TAIR10
Match: AT1G71015.1 (AT1G71015.1 unknown protein)

HSP 1 Score: 175.3 bits (443), Expect = 3.9e-44
Identity = 94/173 (54.34%), Postives = 122/173 (70.52%), Query Frame = 1


Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPVQAGDVVKDYPGFVLLESEAVKHYGARAKPLELH 60
           MGN+ G KKT  +MNI+GE+ KL TPV+AG VVKD+PG VLLESEAVK  G RAKPLE H
Sbjct: 1   MGNSLGTKKTATIMNINGESFKLKTPVEAGTVVKDFPGHVLLESEAVKRLGIRAKPLEPH 60

Query: 61  QKLSTNRLYFLVELPKASKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           Q L + R+YF+VELP+  KE+ PRRVRS I MSAK+RLE+L L+RRS+SDL++MK K+ +
Sbjct: 61  QNLESKRIYFMVELPRTWKERTPRRVRSGIQMSAKERLENLKLSRRSSSDLSVMKKKTEV 120

Query: 121 AEEGGGESEGSGSGSGSRSGATRVKIRLPKAEVERLLKESKDEAEAAERIMGL 174
            +E   E E S            VK++LPK ++E+L KES+  ++ + +I  L
Sbjct: 121 NDE---EREVSS-----------VKLKLPKWKIEKLRKESESGSDFSNKITQL 159

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BLAST of ClCG07G006320 vs. TAIR10
Match: AT1G66480.1 (AT1G66480.1 plastid movement impaired 2)

HSP 1 Score: 152.5 bits (384), Expect = 2.7e-37
Identity = 93/214 (43.46%), Postives = 125/214 (58.41%), Query Frame = 1


Query: 1   MGNTFGVK-KTVKVMNISGETMKLNTPVQAGDVVKDYPGFVLLESEAVKHYGARAKPLEL 60
           MGN+  VK K  KVM I GET ++ TPV A +V  DYPG+VLL+S+AVKH+G R+KPLE 
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 61  HQKLSTNRLYFLVELPKASKEQAP---------RRVRSAINMSAKDRLESLMLARRSASD 120
           +Q L   + YFLVELPK   E            RRV S I++ AK+RL+ LML+RR+ SD
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 121 LTIMKPKSVLAEEGGGESEGSGSGSGSRSGATRVKIRLPKAEVERLLKESKDEAEA-AER 180
           +TI           G    G G G     G T V++RLP++++ +L++E+ ++A A AE+
Sbjct: 121 VTI-----------GRSDGGDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEK 180

Query: 181 IMGLYKTR-----GDVCGNDHREKEKKDSIKPRE 199
           I+G+Y  R     G   G D R +     IK RE
Sbjct: 181 ILGIYMERSGELGGGRGGVDGRRELGSGEIKARE 203

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BLAST of ClCG07G006320 vs. TAIR10
Match: AT5G37840.1 (AT5G37840.1 BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1))

HSP 1 Score: 139.0 bits (349), Expect = 3.1e-33
Identity = 81/178 (45.51%), Postives = 106/178 (59.55%), Query Frame = 1


Query: 1   MGNTFGVKKT-VKVMNISGETMKLNTPVQAGDVVKDYPGFVLLESEAVKHYGARAKPLEL 60
           MGNT  V++  VKVM I G+  +L TPV A D  K+YPGFVLL+SE VK  G RAKPLE 
Sbjct: 1   MGNTIMVRRNKVKVMKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAKPLEP 60

Query: 61  HQKLSTNRLYFLVELPKASKEQ--APRRVRSA-INMSAKDRLESLMLARRSASDLTIMKP 120
           +Q L  N  YFLV+LP   K      RRV S  I++ AK+RLE LML+RR+ SD+     
Sbjct: 61  NQILKPNHTYFLVDLPPVDKRNKLPYRRVMSGNIHVGAKERLEMLMLSRRTVSDV----- 120

Query: 121 KSVLAEEGGGESEGSGSGSGSRSGATRVKIRLPKAEVERLLKESKDEAEAAERIMGLY 175
                    G +     G G   G TRV++RLP++++ +L++ES D +E A +I+  Y
Sbjct: 121 ---------GAARSDVVGDGPELGHTRVRLRLPRSQITKLMEESHDASEVAAKIISAY 164

[Close]

BLAST of ClCG07G006320 vs. NCBI nr
Match: gi|659109562|ref|XP_008454771.1| (PREDICTED: uncharacterized protein At1g66480 isoform X1 [Cucumis melo])

HSP 1 Score: 338.2 bits (866), Expect = 9.8e-90
Identity = 176/198 (88.89%), Postives = 180/198 (90.91%), Query Frame = 1


Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPVQAGDVVKDYPGFVLLESEAVKHYGARAKPLELH 60
           MGNTFGVKKTVKVM ISGET+KLNTPVQ GDVVKDYPGFVLLESEAVKHYG RAKPLELH
Sbjct: 1   MGNTFGVKKTVKVMKISGETLKLNTPVQVGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTNRLYFLVELPKASKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           QKLST RLYFLV+LPK  KEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVDLPKLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120

Query: 121 AEEGGGESEGSGSGSGSRSGATRVKIRLPKAEVERLLKESKDEAEAAERIMGLYKTRGDV 180
            EEGGGESEGSG      SGATRVK+RLPKAEVERLLKE KDEAEAAERIMGLYKTR  V
Sbjct: 121 TEEGGGESEGSG------SGATRVKVRLPKAEVERLLKECKDEAEAAERIMGLYKTRESV 180

Query: 181 CGNDHREKEKKDSIKPRE 199
           C NDH+EKEKKD IKPRE
Sbjct: 181 CENDHKEKEKKDIIKPRE 192

[Close]

BLAST of ClCG07G006320 vs. NCBI nr
Match: gi|659109564|ref|XP_008454773.1| (PREDICTED: uncharacterized protein At1g66480 isoform X2 [Cucumis melo])

HSP 1 Score: 338.2 bits (866), Expect = 9.8e-90
Identity = 176/198 (88.89%), Postives = 180/198 (90.91%), Query Frame = 1


Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPVQAGDVVKDYPGFVLLESEAVKHYGARAKPLELH 60
           MGNTFGVKKTVKVM ISGET+KLNTPVQ GDVVKDYPGFVLLESEAVKHYG RAKPLELH
Sbjct: 1   MGNTFGVKKTVKVMKISGETLKLNTPVQVGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTNRLYFLVELPKASKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           QKLST RLYFLV+LPK  KEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVDLPKLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120

Query: 121 AEEGGGESEGSGSGSGSRSGATRVKIRLPKAEVERLLKESKDEAEAAERIMGLYKTRGDV 180
            EEGGGESEGSG      SGATRVK+RLPKAEVERLLKE KDEAEAAERIMGLYKTR  V
Sbjct: 121 TEEGGGESEGSG------SGATRVKVRLPKAEVERLLKECKDEAEAAERIMGLYKTRESV 180

Query: 181 CGNDHREKEKKDSIKPRE 199
           C NDH+EKEKKD IKPRE
Sbjct: 181 CENDHKEKEKKDIIKPRE 192

[Close]

BLAST of ClCG07G006320 vs. NCBI nr
Match: gi|449445353|ref|XP_004140437.1| (PREDICTED: uncharacterized protein At1g66480 [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 1.4e-83
Identity = 172/200 (86.00%), Postives = 178/200 (89.00%), Query Frame = 1


Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPVQAGDVVKDYPGFVLLESEAVKHYGARAKPLELH 60
           MGNTFGVKKTVKVM ISGETMKL TPVQAGDVVKDYPGFVLLESEAVKHYG RAKPLELH
Sbjct: 1   MGNTFGVKKTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTNRLYFLVELPKASKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           QKLST RLYFLV+LP+  KEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKS+L
Sbjct: 61  QKLSTKRLYFLVDLPRLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSML 120

Query: 121 AEEGGGESEGSGSGSGSRSGA-TRVKIRLPKAEVERLLKESKDEAEAAERIMGLYKTRGD 180
            EEGGGESE      GS SGA TRVK+RLPKAEVERLLKE KDEAEAAERIMGLYKTR +
Sbjct: 121 TEEGGGESE-----EGSVSGAPTRVKMRLPKAEVERLLKECKDEAEAAERIMGLYKTREN 180

Query: 181 VCGNDHREKE-KKDSIKPRE 199
              NDH+EKE KKD IKPRE
Sbjct: 181 AYENDHKEKEIKKDIIKPRE 195

[Close]

BLAST of ClCG07G006320 vs. NCBI nr
Match: gi|1009107967|ref|XP_015882404.1| (PREDICTED: uncharacterized protein At1g66480 [Ziziphus jujuba])

HSP 1 Score: 225.3 bits (573), Expect = 9.2e-56
Identity = 121/194 (62.37%), Postives = 143/194 (73.71%), Query Frame = 1


Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPVQAGDVVKDYPGFVLLESEAVKHYGARAKPLELH 60
           MGN+ G KKT KVM I+GET KL TP+QA +VVKDYPG VLLESE+VKH+G RAKPLE H
Sbjct: 1   MGNSLGGKKTTKVMKINGETFKLKTPIQANEVVKDYPGHVLLESESVKHFGTRAKPLEPH 60

Query: 61  QKLSTNRLYFLVELPKASKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           Q+L   RLYFLVELPK  KEQ PRRVRS INMSAKDRLE+LMLARRS SDL+IMKP  + 
Sbjct: 61  QELQPKRLYFLVELPKVQKEQVPRRVRSGINMSAKDRLENLMLARRSVSDLSIMKPTYIS 120

Query: 121 AEE---GGGESEGSGSGSGSRSGATRVKIRLPKAEVERLLKESKDEAEAAERIMGLYKTR 180
            +E    GG SE          G  RV++RLPKAEVE+L+KESK+E EAAE+IM +Y   
Sbjct: 121 QDEMMTKGGVSE--------NGGGVRVRMRLPKAEVEKLMKESKNEEEAAEKIMEIYLMN 180

Query: 181 GDVCGNDHREKEKK 192
            +  GN  ++  +K
Sbjct: 181 NNGNGNGGKQIAEK 186

[Close]

BLAST of ClCG07G006320 vs. NCBI nr
Match: gi|823158430|ref|XP_012479071.1| (PREDICTED: uncharacterized protein At1g66480-like [Gossypium raimondii])

HSP 1 Score: 224.2 bits (570), Expect = 2.1e-55
Identity = 119/173 (68.79%), Postives = 135/173 (78.03%), Query Frame = 1


Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPVQAGDVVKDYPGFVLLESEAVKHYGARAKPLELH 60
           MGN+ G KK  KVM I+GETMKL TPV+A  VVKDYPG VLLESEAVKH+G RAKPL+ H
Sbjct: 1   MGNSLGGKKMTKVMKINGETMKLKTPVRAEQVVKDYPGHVLLESEAVKHFGIRAKPLQSH 60

Query: 61  QKLSTNRLYFLVELPKASKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           Q L   RLYFLVELP+A KE+ PRRVRS INMSAKDRLESLML+RRS SDLT+MKP   +
Sbjct: 61  QNLEPKRLYFLVELPEAPKERVPRRVRSGINMSAKDRLESLMLSRRSVSDLTLMKPIIAI 120

Query: 121 AEEGGGESEGSGSGSGSRSGATRVKIRLPKAEVERLLKESKDEAEAAERIMGL 174
            EE     E    G GS SGA RVK+RLPK++VERL+KES +E EAAE+IM L
Sbjct: 121 PEE-----ENEEEGGGSESGAMRVKMRLPKSQVERLIKESLNEREAAEKIMQL 168

The following BLAST results are available for this feature:

BLAST of ClCG07G006320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1648_ARATH	4.8e-36	43.46	Uncharacterized protein At1g66480 OS=Arabidopsis thaliana GN=At1g66480 PE=2 SV=1	[more]

BLAST of ClCG07G006320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061E984_THECC	1.4e-55	69.36	Encodes a protein whose expression is responsive to nematode infection, putative...	[more]
A0A0D2PTY5_GOSRA	1.4e-55	68.79	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G162500 PE=4 SV=1	[more]
B9HW76_POPTR	3.2e-55	68.79	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12400g PE=4 SV=1	[more]
B9HJA1_POPTR	1.2e-54	67.05	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s12770g PE=4 SV=1	[more]
D7T8U4_VITVI	1.6e-54	67.63	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04780 PE=4 SV=...	[more]

BLAST of ClCG07G006320 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01340.1	4.1e-46	57.06	Encodes a protein whose expression is responsive to nematode infecti...	[more]
AT1G71015.1	3.9e-44	54.34	unknown protein	[more]
AT1G66480.1	2.7e-37	43.46	plastid movement impaired 2	[more]
AT5G37840.1	3.1e-33	45.51	BEST Arabidopsis thaliana protein match is: plastid movement impaire...	[more]

BLAST of ClCG07G006320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659109562\|ref\|XP_008454771.1\|	9.8e-90	88.89	PREDICTED: uncharacterized protein At1g66480 isoform X1 [Cucumis melo]	[more]
gi\|659109564\|ref\|XP_008454773.1\|	9.8e-90	88.89	PREDICTED: uncharacterized protein At1g66480 isoform X2 [Cucumis melo]	[more]
gi\|449445353\|ref\|XP_004140437.1\|	1.4e-83	86.00	PREDICTED: uncharacterized protein At1g66480 [Cucumis sativus]	[more]
gi\|1009107967\|ref\|XP_015882404.1\|	9.2e-56	62.37	PREDICTED: uncharacterized protein At1g66480 [Ziziphus jujuba]	[more]
gi\|823158430\|ref\|XP_012479071.1\|	2.1e-55	68.79	PREDICTED: uncharacterized protein At1g66480-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009624	response to nematode
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG07G006320.1	ClCG07G006320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..159 score: 4.1
None	No IPR available	unknown	Coil	Coil	coord: 150..170 scor
None	No IPR available	PANTHER	PTHR33148	FAMILY NOT NAMED	coord: 2..177 score: 5.3
None	No IPR available	PANTHER	PTHR33148:SF3	SUBFAMILY NOT NAMED	coord: 2..177 score: 5.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG07G006320	CsaUNG017640	Cucumber (Chinese Long) v2	cuwcgB266
ClCG07G006320	MELO3C018330	Melon (DHL92) v3.5.1	mewcgB068
ClCG07G006320	Cla001950	Watermelon (97103) v1	wcgwmB369
ClCG07G006320	Cla97C07G134240	Watermelon (97103) v2	wcgwmbB307
ClCG07G006320	Bhi07G000280	Wax gourd	wcgwgoB596
ClCG07G006320	CSPI04G27800	Wild cucumber (PI 183967)	cpiwcgB345
ClCG07G006320	CmaCh04G009980	Cucurbita maxima (Rimu)	cmawcgB673
ClCG07G006320	CmaCh04G000550	Cucurbita maxima (Rimu)	cmawcgB674
ClCG07G006320	CmoCh04G000480	Cucurbita moschata (Rifu)	cmowcgB676
ClCG07G006320	CmoCh04G010760	Cucurbita moschata (Rifu)	cmowcgB675
ClCG07G006320	Lsi04G011420	Bottle gourd (USVL1VR-Ls)	lsiwcgB296
ClCG07G006320	Cp4.1LG01g07570	Cucurbita pepo (Zucchini)	cpewcgB409
ClCG07G006320	Cp4.1LG01g06210	Cucurbita pepo (Zucchini)	cpewcgB410
ClCG07G006320	CsGy5G010230	Cucumber (Gy14) v2	cgybwcgB370
ClCG07G006320	MELO3C034251.2	Melon (DHL92) v3.6.1	medwcgB066
ClCG07G006320	Carg00112	Silver-seed gourd	carwcgB0651
ClCG07G006320	Carg22002	Silver-seed gourd	carwcgB0171
ClCG07G006320	CsaV3_5G013600	Cucumber (Chinese Long) v3	cucwcgB423

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None