Cp4.1LG01g06900 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g06900
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG01 : 3988184 .. 3989111 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACATCCACATTCTGAAACTCGCTGAATTATTTGTTCGTTCATCCATCCATCCATCTCTGTTTTGTTTTTTGGGTTTTGAAAAATGTCGCATTTCCAATCTGGAACCGATCAGTATGGCAACCCCGTTCGCCAGACTGATGAATATGGCAACGTGATCCACGGGACCGGTCAGCACGTCGACCCGCATCACCGGACCGGTGGGACCGGTGAGTTCCGTGAGACGGATCAGTATGGCAACCCAATTCGGCGGGGCGGTGAGTACGGTGACCGGATCGGCACTGGTGGGACGTATGAGACTGGTGGGCACGGTGGCGTGGGTTATGGCGGAGGACACCACCAGCAGCATAAAGAGCATGGGGGAGTACTTCGTCGCTCTGGAAGCTCTAGTAGTTCCAGCTCGGTAAAATTTAATGTTATATGATTACTTTCATACATTAGTGTATAATAATAATAATAATAATAATAATAATAATGAGGTTGAAATTTCAGTCGGAAGATGATGGGCATGGAGGGAGGAGGAAGAAGGGGCTGAAAGAGAAGATAAAGGAGAAGCTGCCAGGACATCATGACACGGCGCAGCAGCCACACGCGACATCAACCACTACACCTGGCGGGTACTCTTCGGTGGAGCACGGCGGCCAACACGAGAAGAAGGGGATAATGGATAAGATCAAGGAGAAGTTGCCTGGACATAACTGAGAGGCGTCGCCCACCATATGTGGGTGTAGATATGATATTAATAAAGTGTTAGATGTGCGTGTATTGGGACTTTGTGTAGTGTAAGTGTTGGTATGGCTAAATAACGAGGGAGCGTGGTGGTCGGTTTGTGGTTGTGTGTATTATTATGTCATTTATGGGTTTGATGTATGTACGTCTCGTTTGTGTTCATCTCATCTATCTTCTACTTGGGCTGTTTTACGCTTCAA

mRNA sequence

CAACATCCACATTCTGAAACTCGCTGAATTATTTGTTCGTTCATCCATCCATCCATCTCTGTTTTGTTTTTTGGGTTTTGAAAAATGTCGCATTTCCAATCTGGAACCGATCAGTATGGCAACCCCGTTCGCCAGACTGATGAATATGGCAACGTGATCCACGGGACCGGTCAGCACGTCGACCCGCATCACCGGACCGGTGGGACCGGTGAGTTCCGTGAGACGGATCAGTATGGCAACCCAATTCGGCGGGGCGGTGAGTACGGTGACCGGATCGGCACTGGTGGGACGTATGAGACTGGTGGGCACGGTGGCGTGGGTTATGGCGGAGGACACCACCAGCAGCATAAAGAGCATGGGGGAGTACTTCGTCGCTCTGGAAGCTCTAGTAGTTCCAGCTCGTCGGAAGATGATGGGCATGGAGGGAGGAGGAAGAAGGGGCTGAAAGAGAAGATAAAGGAGAAGCTGCCAGGACATCATGACACGGCGCAGCAGCCACACGCGACATCAACCACTACACCTGGCGGGTACTCTTCGGTGGAGCACGGCGGCCAACACGAGAAGAAGGGGATAATGGATAAGATCAAGGAGAAGTTGCCTGGACATAACTGAGAGGCGTCGCCCACCATATGTGGGTGTAGATATGATATTAATAAAGTGTTAGATGTGCGTGTATTGGGACTTTGTGTAGTGTAAGTGTTGGTATGGCTAAATAACGAGGGAGCGTGGTGGTCGGTTTGTGGTTGTGTGTATTATTATGTCATTTATGGGTTTGATGTATGTACGTCTCGTTTGTGTTCATCTCATCTATCTTCTACTTGGGCTGTTTTACGCTTCAA

Coding sequence (CDS)

ATGTCGCATTTCCAATCTGGAACCGATCAGTATGGCAACCCCGTTCGCCAGACTGATGAATATGGCAACGTGATCCACGGGACCGGTCAGCACGTCGACCCGCATCACCGGACCGGTGGGACCGGTGAGTTCCGTGAGACGGATCAGTATGGCAACCCAATTCGGCGGGGCGGTGAGTACGGTGACCGGATCGGCACTGGTGGGACGTATGAGACTGGTGGGCACGGTGGCGTGGGTTATGGCGGAGGACACCACCAGCAGCATAAAGAGCATGGGGGAGTACTTCGTCGCTCTGGAAGCTCTAGTAGTTCCAGCTCGTCGGAAGATGATGGGCATGGAGGGAGGAGGAAGAAGGGGCTGAAAGAGAAGATAAAGGAGAAGCTGCCAGGACATCATGACACGGCGCAGCAGCCACACGCGACATCAACCACTACACCTGGCGGGTACTCTTCGGTGGAGCACGGCGGCCAACACGAGAAGAAGGGGATAATGGATAAGATCAAGGAGAAGTTGCCTGGACATAACTGA

Protein sequence

MSHFQSGTDQYGNPVRQTDEYGNVIHGTGQHVDPHHRTGGTGEFRETDQYGNPIRRGGEYGDRIGTGGTYETGGHGGVGYGGGHHQQHKEHGGVLRRSGSSSSSSSSEDDGHGGRRKKGLKEKIKEKLPGHHDTAQQPHATSTTTPGGYSSVEHGGQHEKKGIMDKIKEKLPGHN
Homology
[Close]
BLAST of Cp4.1LG01g06900 vs. Swiss-Prot
Match: DHR18_ARATH (Dehydrin Rab18 OS=Arabidopsis thaliana GN=RAB18 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.0e-26
Identity = 94/179 (52.51%), Postives = 109/179 (60.89%), Query Frame = 1 

Query: 8   TDQYGNPVRQT-DEYGNVIHGTGQHVDPHHRTGGTGEFRETDQYGNPIRRGGEYGDRIGT 67
           TD+YGNP++Q  DEYGN + G G      + TGG G       YG   +  G  G   GT
Sbjct: 13  TDEYGNPIQQQYDEYGNPMGGGG------YGTGGGGGATGGQGYGTGGQGYGSGGQGYGT 72

Query: 68  GGT-YETG-GHGGVGYGGG--HHQQHKEH-------GGVLRRSGSSSSSSSSEDDGHGGR 127
           GG  Y TG G  G G GGG  HH Q + H       GG+L RSGS SSSSS EDDG GGR
Sbjct: 73  GGQGYGTGTGTEGFGTGGGARHHGQEQLHKESGGGLGGMLHRSGSGSSSSS-EDDGQGGR 132

Query: 128 RKKGLKEKIKEKLPGHHDTAQQPHATSTTTPGGYSSVEHGGQ-HEKKGIMDKIKEKLPG 174
           RKKG+ +KIKEKLPGHHD + Q  A       GY +  +GG+ HEKKG+MDKIKEKLPG
Sbjct: 133 RKKGITQKIKEKLPGHHDQSGQAQAMG-GMGSGYDAGGYGGEHHEKKGMMDKIKEKLPG 183

[Close]
BLAST of Cp4.1LG01g06900 vs. Swiss-Prot
Match: DHN1_AVIMR (Dehydrin DHN1 OS=Avicennia marina GN=DHN1 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.5e-22
Identity = 93/185 (50.27%), Postives = 102/185 (55.14%), Query Frame = 1 

Query: 8   TDQYGNPVRQTDEYG-------NVIHGT-----GQHVDPHHRTGGTGEFRETDQYGNPIR 67
           TD+YGNP+RQT E+G       N  +GT     G   D    T  TG  ++TDQYG P  
Sbjct: 12  TDEYGNPIRQTGEFGATGAYGANQQYGTTGTTVGYGTDQCVTTVTTGA-QKTDQYGTPGT 71

Query: 68  RGGEYGDRIGTGGTY-ETGGHGGVGYGGGHHQQHKEHGGVLRRSGSSSSSSSSEDDGHGG 127
            G    D+ GT GT  E G HGG G   G        GG   R   SS SSSSEDDG GG
Sbjct: 72  TGAYGTDQYGTTGTTGEYGTHGG-GIAPGATDAGLAGGGGGHRRLGSSGSSSSEDDGQGG 131

Query: 128 RRKKGLKEKIKEKLPGHHDTAQQPHATSTTTPGGYSSVEHGG------QHEKKGIMDKIK 174
           RRKKG+KEKIKEKLPG      Q H T   + GGY   EHGG        EKKGIMDKIK
Sbjct: 132 RRKKGIKEKIKEKLPGGGHGDDQTHPTPPGS-GGY-GYEHGGAAESPEHEEKKGIMDKIK 191

[Close]
BLAST of Cp4.1LG01g06900 vs. Swiss-Prot
Match: DH16B_ORYSJ (Dehydrin Rab16B OS=Oryza sativa subsp. japonica GN=RAB16B PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.0e-21
Identity = 79/165 (47.88%), Postives = 90/165 (54.55%), Query Frame = 1 

Query: 32  VDPHHRTGGTGEFRETDQYGNPIRRGGEYGDRIGTGGTYET---GGHGGVGYGGGHHQQH 91
           +D +    G G  R  D YGNP+  G   G     GG +     GGH G G GG      
Sbjct: 1   MDNYQGQHGYGADR-VDVYGNPVGAGQYGGGATAPGGGHGAMGMGGHAGAGAGGQFQPAR 60

Query: 92  KEH--GGVLRRSGSSSSSSSSEDDGHGGRRKKGLKEKIKEKLPG-----HHDT------- 151
           ++H  GG+L RSGSSSSSSSSEDDG GGRRKKG+KEKIKEKLPG     +H         
Sbjct: 61  EDHKTGGILHRSGSSSSSSSSEDDGMGGRRKKGIKEKIKEKLPGGNKGNNHQQQQMMGNT 120

Query: 152 ----AQQPHATSTTTPGGYSSVEHGGQHEKKGIMDKIKEKLPGHN 176
                QQ HA  T    G    E+G   EKKG MDKIKEKLPG +
Sbjct: 121 GGAYGQQGHAGMTGAGTGVHGAEYGNAGEKKGFMDKIKEKLPGQH 164

[Close]
BLAST of Cp4.1LG01g06900 vs. Swiss-Prot
Match: DHB_CRAPL (Desiccation-related protein clone PCC6-19 OS=Craterostigma plantagineum PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 8.5e-21
Identity = 90/176 (51.14%), Postives = 100/176 (56.82%), Query Frame = 1 

Query: 5   QSGTDQYGNPVRQTDEYGNVIH-GTGQHVDPHHRTGGT-GEFRETDQYGNPIRRG-GEYG 64
           Q G ++YG   R TDEYGN I  G G H     R GG  G  ++  Q+G     G G  G
Sbjct: 3   QFGGEKYGG--RHTDEYGNPIQQGAGAH-----RGGGIMGGGQQAGQHGTTGVLGHGTAG 62

Query: 65  DRIGTGGTYETGGHGGVGYGGGHHQQHKEHGGVLRRSGSSSSSSSSEDDGHGGRRKKGLK 124
               TGG     GHG  G GG    QH       RRSGSSSSSSSSE DG GGRRKKG+K
Sbjct: 63  QHGTTGGGL---GHGTAGTGGALGGQH-------RRSGSSSSSSSSESDGEGGRRKKGMK 122

Query: 125 EKIKEKLPGHHDTA--QQPHATSTTTPGGYSSVEHG--GQHEKKGIMDKIKEKLPG 174
           +K+KEKLPG H T   QQ + T+ T         HG   QHEKKGIMDKIKEKLPG
Sbjct: 123 DKMKEKLPGGHGTTTDQQQYGTAAT---------HGQAQQHEKKGIMDKIKEKLPG 152

[Close]
BLAST of Cp4.1LG01g06900 vs. Swiss-Prot
Match: DH16C_ORYSI (Dehydrin Rab16C OS=Oryza sativa subsp. indica GN=RAB16C PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-20
Identity = 79/156 (50.64%), Postives = 89/156 (57.05%), Query Frame = 1 

Query: 48  DQYGNPIRRGGEYGDRIGTGGTYETGGHGGVGYGGGH----------HQQHKEHGGVLRR 107
           D YGNP+   G+YG     G T   GGHG +G GG H           ++HK  GG+L R
Sbjct: 16  DVYGNPV--AGQYGG----GATAPGGGHGVMGMGGHHAGAGGQFQPVKEEHKT-GGILHR 75

Query: 108 SGSSSSSSSSEDDGHGGRRKKGLKEKIKEKLPG-----HHDT-----------AQQPHA- 167
           SGSSSSSSSSEDDG GGRRKKG+KEKIKEKLPG     +H              QQ HA 
Sbjct: 76  SGSSSSSSSSEDDGMGGRRKKGIKEKIKEKLPGGNKGNNHQQQQMMGNTGGAYGQQGHAG 135

Query: 168 -TSTTTPGGYSSVEHGGQHEKKGIMDKIKEKLPGHN 176
            T   T  G    E+G   EKKG MDKIKEKLPG +
Sbjct: 136 MTGAGTGTGVHGAEYGNTGEKKGFMDKIKEKLPGQH 164

[Close]
BLAST of Cp4.1LG01g06900 vs. TrEMBL
Match: A0A0A0KWM9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G045040 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 5.3e-62
Identity = 136/183 (74.32%), Postives = 150/183 (81.97%), Query Frame = 1 

Query: 1   MSHFQSG-TDQYGNPVRQTDEYGNVIHGTGQHVDPHHRTGGTGEFRETDQYGNPIRRGGE 60
           M+H+QSG TDQYGNP+RQTDEYGNVI  TGQ+ DP  RTG   EFRETDQYGNP RR  +
Sbjct: 1   MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTG---EFRETDQYGNPGRRTDD 60

Query: 61  Y-------GDRIGTGGTYETGGHGGVGYGGGHHQQHKEHGGVLRRSGSSSSSSSSEDDGH 120
                   G  +GTGGTYET G+GG GYGGGHHQQHKEHGG+L RSG SSSSSSSEDDGH
Sbjct: 61  VFGNPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSG-SSSSSSSEDDGH 120

Query: 121 GGRRKKGLKEKIKEKLPGHHDTAQQPHATSTTTPGGYSSVEHGGQHEKKGIMDKIKEKLP 176
           GGRRKKGLKEK+KEKLPGHH   +Q  A STTTPGGY+S E+GGQHEKKGIM+KIKEKLP
Sbjct: 121 GGRRKKGLKEKVKEKLPGHHRHEEQ--AVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLP 177

[Close]
BLAST of Cp4.1LG01g06900 vs. TrEMBL
Match: E7BXD9_JATCU (Dehydrin OS=Jatropha curcas GN=DHN-2 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.8e-33
Identity = 100/173 (57.80%), Postives = 112/173 (64.74%), Query Frame = 1 

Query: 1   MSHFQSGTDQYGNPVRQTDEYGNVIHGTGQHVDPHHRTGGTGEFRETDQYGNPIRRGGEY 60
           M+HFQ+   QYG  V  TDEYGN +   G+ +            R+TD+YGNPI    + 
Sbjct: 1   MAHFQN---QYG-AVNYTDEYGNPVDEYGRAI------------RQTDEYGNPIP---QT 60

Query: 61  GDRIGTGGTYETGGHGGVGYGGGHHQQHKEHGGVLRRSGSSSSSSSSEDDGHGGRRKKGL 120
           G     GG  ETG     G G GH Q+H    G L RSGSSSSSSS EDDGHGGRRKKGL
Sbjct: 61  GTTTAYGGAPETGT---TGLGMGHRQEHYGESGQLHRSGSSSSSSS-EDDGHGGRRKKGL 120

Query: 121 KEKIKEKLPGHHDTAQQPHATSTTTPGGYSSVEHGGQHEKKGIMDKIKEKLPG 174
           KEKIKEKLPGHH   ++  ATS TTPGGY S E+G  HEKKGIMDKIKEKLPG
Sbjct: 121 KEKIKEKLPGHHKE-ERTQATSATTPGGYHSAEYGHDHEKKGIMDKIKEKLPG 149

[Close]
BLAST of Cp4.1LG01g06900 vs. TrEMBL
Match: H2EUU8_EUCGL (Dehydrin 3 (Fragment) OS=Eucalyptus globulus GN=DHN3 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 9.1e-30
Identity = 93/175 (53.14%), Postives = 109/175 (62.29%), Query Frame = 1 

Query: 1   MSHFQSGTDQYGNPV-RQTDEYGNVIHGTGQHVDPHHRTGGTGEFRETDQYGNPIRRGGE 60
           M+HFQ+    Y +P  R+TDEYGN +                     TD+YGNPIR   E
Sbjct: 1   MAHFQN---HYASPAGRRTDEYGNPV-------------------TRTDEYGNPIRPADE 60

Query: 61  YGDRIGTGGTYETGGHGGVGYGGGHHQQHKEHGGVLRRSG-SSSSSSSSEDDGHGGRRKK 120
           YG+ +     Y   GHG    G  H ++H   GG+LRRSG SSSSSSSSEDDGHGGRRKK
Sbjct: 61  YGNPV-----YPGTGHG---VGAEHGKEHHTLGGMLRRSGSSSSSSSSSEDDGHGGRRKK 120

Query: 121 GLKEKIKEKLPGHHDTAQQPHATSTTTPGGYSSVEHGGQHEKKGIMDKIKEKLPG 174
           G+KEKIKEKLPG HD     H T++TTP GY +   G  HEKKG+MDKIKEKLPG
Sbjct: 121 GIKEKIKEKLPGRHDDTPS-HTTASTTPTGYHAT--GEPHEKKGVMDKIKEKLPG 142

[Close]
BLAST of Cp4.1LG01g06900 vs. TrEMBL
Match: Q76MG2_TOBAC (Dehydrin OS=Nicotiana tabacum GN=NtERD10B PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.2e-28
Identity = 99/177 (55.93%), Postives = 110/177 (62.15%), Query Frame = 1 

Query: 8   TDQYGNPVRQTDEYGNVIHGTGQHVDPHHRTGGTGEFRETDQYGNPIRRGGEYGDRIGTG 67
           TD+YGNP+RQTDEYGN          P H TGGT                G+YG   GTG
Sbjct: 16  TDEYGNPIRQTDEYGN----------PVHHTGGT---------------MGDYG-TTGTG 75

Query: 68  GTYETGGHGGVGYG----GGHHQQHKEH---GGVLRRSG-SSSSSSSSEDDGHGGRR-KK 127
           G Y T   GG G+     GG H+   EH   GG+L RSG SSSSSSSSEDDG GGRR KK
Sbjct: 76  GAYGTHAGGGAGHTTGILGGEHRPGHEHGTLGGMLHRSGSSSSSSSSSEDDGQGGRRKKK 135

Query: 128 GLKEKIKEKLPGHHDTAQQPHATSTTTPGGYSSVEHGGQHEKKGIMDKIKEKLPGHN 176
           G+KEKIKEKLPG H    Q H+T+TTT  GY  +E    HEKKGIMDKIKEKLPGH+
Sbjct: 136 GMKEKIKEKLPGGHKD-DQTHSTATTTTTGY-GMEGEHHHEKKGIMDKIKEKLPGHH 164

[Close]
BLAST of Cp4.1LG01g06900 vs. TrEMBL
Match: B5TV66_CAMSI (Putative dehydrin OS=Camellia sinensis PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.9e-27
Identity = 97/204 (47.55%), Postives = 110/204 (53.92%), Query Frame = 1 

Query: 8   TDQYGNPVRQTDEYGNVIHGTGQHVDPHHRTGGTGEFRETDQYGNPIRRGGEYGD----- 67
           ++QYGNP RQTDEYGN    T +  DP          R+ D+YGNP+   G  GD     
Sbjct: 5   SNQYGNPPRQTDEYGNPPRKTDEFGDP---------VRQIDEYGNPVHHTGTMGDYGTTT 64

Query: 68  --------RIGTGGTYETGGHGGVGYG----------------GGHHQQHKEHGGVLRRS 127
                     GT GTY TG  G  G G                GGHHQQH + GGVL RS
Sbjct: 65  GTTGVHGTHTGTTGTYGTGTTGTYGTGMDTTGTTGTHGLSTGTGGHHQQHAD-GGVLHRS 124

Query: 128 GSSSSSSSSEDDGHGGRR-KKGLKEKIKEKLPGHHDTAQQPHATSTTTPG-------GYS 175
           G  SSSSSSEDDG GGRR KKGL +KIKEKLPG H      +  +TTTPG       GY 
Sbjct: 125 G--SSSSSSEDDGQGGRRKKKGLTQKIKEKLPGGHKDQTPQYGNTTTTPGAATTGGYGYG 184

[Close]
BLAST of Cp4.1LG01g06900 vs. TAIR10
Match: AT5G66400.1 (AT5G66400.1 Dehydrin family protein)

HSP 1 Score: 121.3 bits (303), Expect = 5.8e-28
Identity = 94/179 (52.51%), Postives = 109/179 (60.89%), Query Frame = 1 

Query: 8   TDQYGNPVRQT-DEYGNVIHGTGQHVDPHHRTGGTGEFRETDQYGNPIRRGGEYGDRIGT 67
           TD+YGNP++Q  DEYGN + G G      + TGG G       YG   +  G  G   GT
Sbjct: 13  TDEYGNPIQQQYDEYGNPMGGGG------YGTGGGGGATGGQGYGTGGQGYGSGGQGYGT 72

Query: 68  GGT-YETG-GHGGVGYGGG--HHQQHKEH-------GGVLRRSGSSSSSSSSEDDGHGGR 127
           GG  Y TG G  G G GGG  HH Q + H       GG+L RSGS SSSSS EDDG GGR
Sbjct: 73  GGQGYGTGTGTEGFGTGGGARHHGQEQLHKESGGGLGGMLHRSGSGSSSSS-EDDGQGGR 132

Query: 128 RKKGLKEKIKEKLPGHHDTAQQPHATSTTTPGGYSSVEHGGQ-HEKKGIMDKIKEKLPG 174
           RKKG+ +KIKEKLPGHHD + Q  A       GY +  +GG+ HEKKG+MDKIKEKLPG
Sbjct: 133 RKKGITQKIKEKLPGHHDQSGQAQAMG-GMGSGYDAGGYGGEHHEKKGMMDKIKEKLPG 183

[Close]
BLAST of Cp4.1LG01g06900 vs. TAIR10
Match: AT2G21490.1 (AT2G21490.1 dehydrin LEA)

HSP 1 Score: 89.4 bits (220), Expect = 2.5e-18
Identity = 81/175 (46.29%), Postives = 99/175 (56.57%), Query Frame = 1 

Query: 8   TDQYGNPVRQ-TDEYGNVIHGTGQ-HVDPHHRTGGTGEFRE--TDQYG--NPIRRGGEYG 67
           TD  GNP+   TDE+GN ++ TG     P H+   T +  E  T   G  +P       G
Sbjct: 15  TDTQGNPIVDLTDEHGNPMYLTGVVSSTPQHKESTTSDIAEHPTSTVGETHPAAAPAGAG 74

Query: 68  DRIGTGGTYETGGHGGVGYGGGHHQQHKEHGGVLRRSGSSSSSSSSEDDGHGGRRKKGLK 127
                  T  + G G    G  HH   +EH   LRRSGSSSSSSS EDDG GGRRKK +K
Sbjct: 75  AATAATATGVSAGTGATTTGQQHHGSLEEH---LRRSGSSSSSSS-EDDGQGGRRKKSIK 134

Query: 128 EKIKEKL-PGHHDTAQQPHATSTTTPGGYSSVEHGGQHEKKGIMDKIKEKLPGHN 176
           EKIKEK   G H   Q P AT+TTT  G ++ +    HEKKGI++KIK+KLPGH+
Sbjct: 135 EKIKEKFGSGKHKDEQTP-ATATTT--GPATTDQ--PHEKKGILEKIKDKLPGHH 180

[Close]
BLAST of Cp4.1LG01g06900 vs. TAIR10
Match: AT3G50980.1 (AT3G50980.1 dehydrin xero 1)

HSP 1 Score: 85.9 bits (211), Expect = 2.7e-17
Identity = 70/141 (49.65%), Postives = 83/141 (58.87%), Query Frame = 1 

Query: 36  HRTGGTGEFRETDQYGNPIRRGGEYGDRIGTGGTYET-GGHGGVGYGGGHHQQHKEHGGV 95
           +++G     ++ DQ+GNP            T G Y T GG   V  GGG         G+
Sbjct: 6   NQSGAQQTHQQLDQFGNPFP---------ATTGAYGTAGGAPAVAEGGGL-------SGM 65

Query: 96  LRRSGSSSSSSSSEDDGHGGRR--KKGLKEKIKEKLPGHHDTAQQPHATSTTTPGGYSSV 155
           L RSGSSSSSSS EDDG GGRR  KKG+ EKIKEKLPGHHD+ +     STTT     +V
Sbjct: 66  LHRSGSSSSSSS-EDDGLGGRRRKKKGITEKIKEKLPGHHDSNKTSSLGSTTTAYDTGTV 125

Query: 156 EHGGQHEKKGIMDKIKEKLPG 174
                HEKKG+M+KIKEKLPG
Sbjct: 126 ----HHEKKGMMEKIKEKLPG 125

[Close]
BLAST of Cp4.1LG01g06900 vs. TAIR10
Match: AT1G20440.1 (AT1G20440.1 cold-regulated 47)

HSP 1 Score: 68.9 bits (167), Expect = 3.4e-12
Identity = 50/95 (52.63%), Postives = 59/95 (62.11%), Query Frame = 1 

Query: 95  LRRSGSSSSSSSSEDDGH----------GGRRKKGLKEKIKEKLPGHHD-TAQQ--PHAT 154
           L RS SSSSSSS E+             G   KKGL EKIKEKLPGHHD TA+   P +T
Sbjct: 104 LHRSNSSSSSSSDEEGEEKKEKKKKIVEGEEDKKGLVEKIKEKLPGHHDKTAEDDVPVST 163

Query: 155 STTTPGGYSSVEHG-GQHEKKGIMDKIKEKLPGHN 176
           +   P   S VEH   + EKKG+++KIKEKLPGH+
Sbjct: 164 TIPVPVSESVVEHDHPEEEKKGLVEKIKEKLPGHH 198

[Close]
BLAST of Cp4.1LG01g06900 vs. TAIR10
Match: AT3G50970.1 (AT3G50970.1 dehydrin family protein)

HSP 1 Score: 57.4 bits (137), Expect = 1.0e-08
Identity = 51/124 (41.13%), Postives = 63/124 (50.81%), Query Frame = 1 

Query: 58  GEYGD-RIGTGGTYETGGHGGVGYGGGHHQQHKEHGGVLRR-SGSSSSSSSSEDDGHGGR 117
           G +G  + GT  TY T   GGV     HH++      V+ +  G   S  +  +  +G  
Sbjct: 79  GHHGSHQTGTNTTYGTTNTGGV-----HHEKKSVTEKVMEKLPGHHGSHQTGTNTAYGTN 138

Query: 118 ------RKKGLKEKIKEKLPGHHDTAQQPHATSTTTPGGYSSVEHGGQHEKKGIMDKIKE 174
                  KKG+ EKIKE+LPGHH T    H T TTT  G + V H   HE K  MDKIKE
Sbjct: 139 TNVVHHEKKGIAEKIKEQLPGHHGT----HKTGTTTSYGNTGVVH---HENKSTMDKIKE 190

[Close]
BLAST of Cp4.1LG01g06900 vs. NCBI nr
Match: gi|659102400|ref|XP_008452109.1| (PREDICTED: dehydrin DHN1 [Cucumis melo])

HSP 1 Score: 246.9 bits (629), Expect = 2.6e-62
Identity = 136/183 (74.32%), Postives = 149/183 (81.42%), Query Frame = 1 

Query: 1   MSHFQSG-TDQYGNPVRQTDEYGNVIHGTGQHVDPHHRTGGTGEFRETDQYGNPIRRGGE 60
           M+H+QSG TDQYGNP+RQTDEYGNVI  TGQ+ DP  RTG   EFRETDQYGNP+RR  +
Sbjct: 1   MAHYQSGGTDQYGNPIRQTDEYGNVISETGQYGDPLRRTG---EFRETDQYGNPVRRTDD 60

Query: 61  Y-------GDRIGTGGTYETGGHGGVGYGGGHHQQHKEHGGVLRRSGSSSSSSSSEDDGH 120
                   G  +GTGGTYET G+GG GYGGGHHQQHKEHGG+L RSGSSSSSSS EDDGH
Sbjct: 61  VFGNPVGTGTGMGTGGTYETSGYGGAGYGGGHHQQHKEHGGILHRSGSSSSSSS-EDDGH 120

Query: 121 GGRRKKGLKEKIKEKLPGHHDTAQQPHATSTTTPGGYSSVEHGGQHEKKGIMDKIKEKLP 176
           GGRRKKGLKEK+KEKLPG H    Q  A STTTPGGY+S EHGGQHEKKGIM+KIKEKLP
Sbjct: 121 GGRRKKGLKEKVKEKLPGRHHHEGQ--AVSTTTPGGYASAEHGGQHEKKGIMEKIKEKLP 177

[Close]
BLAST of Cp4.1LG01g06900 vs. NCBI nr
Match: gi|778690692|ref|XP_011653150.1| (PREDICTED: dehydrin DHN1-like [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 7.6e-62
Identity = 136/183 (74.32%), Postives = 150/183 (81.97%), Query Frame = 1 

Query: 1   MSHFQSG-TDQYGNPVRQTDEYGNVIHGTGQHVDPHHRTGGTGEFRETDQYGNPIRRGGE 60
           M+H+QSG TDQYGNP+RQTDEYGNVI  TGQ+ DP  RTG   EFRETDQYGNP RR  +
Sbjct: 1   MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTG---EFRETDQYGNPGRRTDD 60

Query: 61  Y-------GDRIGTGGTYETGGHGGVGYGGGHHQQHKEHGGVLRRSGSSSSSSSSEDDGH 120
                   G  +GTGGTYET G+GG GYGGGHHQQHKEHGG+L RSG SSSSSSSEDDGH
Sbjct: 61  VFGNPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSG-SSSSSSSEDDGH 120

Query: 121 GGRRKKGLKEKIKEKLPGHHDTAQQPHATSTTTPGGYSSVEHGGQHEKKGIMDKIKEKLP 176
           GGRRKKGLKEK+KEKLPGHH   +Q  A STTTPGGY+S E+GGQHEKKGIM+KIKEKLP
Sbjct: 121 GGRRKKGLKEKVKEKLPGHHRHEEQ--AVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLP 177

[Close]
BLAST of Cp4.1LG01g06900 vs. NCBI nr
Match: gi|821324823|ref|NP_001295638.1| (dehydrin Rab18-like [Jatropha curcas])

HSP 1 Score: 150.6 bits (379), Expect = 2.5e-33
Identity = 100/173 (57.80%), Postives = 112/173 (64.74%), Query Frame = 1 

Query: 1   MSHFQSGTDQYGNPVRQTDEYGNVIHGTGQHVDPHHRTGGTGEFRETDQYGNPIRRGGEY 60
           M+HFQ+   QYG  V  TDEYGN +   G+ +            R+TD+YGNPI    + 
Sbjct: 1   MAHFQN---QYG-AVNYTDEYGNPVDEYGRAI------------RQTDEYGNPIP---QT 60

Query: 61  GDRIGTGGTYETGGHGGVGYGGGHHQQHKEHGGVLRRSGSSSSSSSSEDDGHGGRRKKGL 120
           G     GG  ETG     G G GH Q+H    G L RSGSSSSSSS EDDGHGGRRKKGL
Sbjct: 61  GTTTAYGGAPETGT---TGLGMGHRQEHYGESGQLHRSGSSSSSSS-EDDGHGGRRKKGL 120

Query: 121 KEKIKEKLPGHHDTAQQPHATSTTTPGGYSSVEHGGQHEKKGIMDKIKEKLPG 174
           KEKIKEKLPGHH   ++  ATS TTPGGY S E+G  HEKKGIMDKIKEKLPG
Sbjct: 121 KEKIKEKLPGHHKE-ERTQATSATTPGGYHSAEYGHDHEKKGIMDKIKEKLPG 149

[Close]
BLAST of Cp4.1LG01g06900 vs. NCBI nr
Match: gi|373842083|gb|AEY77126.1| (dehydrin 3, partial [Eucalyptus globulus])

HSP 1 Score: 138.3 bits (347), Expect = 1.3e-29
Identity = 93/175 (53.14%), Postives = 109/175 (62.29%), Query Frame = 1 

Query: 1   MSHFQSGTDQYGNPV-RQTDEYGNVIHGTGQHVDPHHRTGGTGEFRETDQYGNPIRRGGE 60
           M+HFQ+    Y +P  R+TDEYGN +                     TD+YGNPIR   E
Sbjct: 1   MAHFQN---HYASPAGRRTDEYGNPV-------------------TRTDEYGNPIRPADE 60

Query: 61  YGDRIGTGGTYETGGHGGVGYGGGHHQQHKEHGGVLRRSG-SSSSSSSSEDDGHGGRRKK 120
           YG+ +     Y   GHG    G  H ++H   GG+LRRSG SSSSSSSSEDDGHGGRRKK
Sbjct: 61  YGNPV-----YPGTGHG---VGAEHGKEHHTLGGMLRRSGSSSSSSSSSEDDGHGGRRKK 120

Query: 121 GLKEKIKEKLPGHHDTAQQPHATSTTTPGGYSSVEHGGQHEKKGIMDKIKEKLPG 174
           G+KEKIKEKLPG HD     H T++TTP GY +   G  HEKKG+MDKIKEKLPG
Sbjct: 121 GIKEKIKEKLPGRHDDTPS-HTTASTTPTGYHAT--GEPHEKKGVMDKIKEKLPG 142

[Close]
BLAST of Cp4.1LG01g06900 vs. NCBI nr
Match: gi|747072535|ref|XP_011083184.1| (PREDICTED: LOW QUALITY PROTEIN: dehydrin DHN1 [Sesamum indicum])

HSP 1 Score: 137.1 bits (344), Expect = 2.9e-29
Identity = 92/168 (54.76%), Postives = 101/168 (60.12%), Query Frame = 1 

Query: 8   TDQYGNPVRQTDEYGNVIHGTGQHVDPHHRTGGTGEFRETDQYGNPIRRGGEYGDRIGTG 67
           TD+YGNP+R TDEYGN +H         HR GGT ++  T  YG          D+ GT 
Sbjct: 12  TDEYGNPIRHTDEYGNPVH---------HRPGGTEQYGTTGAYGTT--------DQYGTT 71

Query: 68  GTYETGGHGGVGYGGGHHQQHKEHGGVLRRSGSSSSSSSSEDDGHGGRRKKGLKEKIKEK 127
           GT  TG +GG              G   RRSGSSSSSSS EDDG GGRRKKGLKEKIKEK
Sbjct: 72  GT--TGAYGG--------------GAPXRRSGSSSSSSS-EDDGQGGRRKKGLKEKIKEK 131

Query: 128 LP--GHHDTAQQPHATSTTTPGGYSSVEHGGQHEKKGIMDKIKEKLPG 174
           LP  GH D      A +TT  GG    EHGG+HEKKGIMDKIKEKLPG
Sbjct: 132 LPGGGHRDDQAHSGAATTTPGGGGYGYEHGGEHEKKGIMDKIKEKLPG 145

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g06900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DHR18_ARATH1.0e-2652.51Dehydrin Rab18 OS=Arabidopsis thaliana GN=RAB18 PE=2 SV=1[more]
DHN1_AVIMR3.5e-2250.27Dehydrin DHN1 OS=Avicennia marina GN=DHN1 PE=1 SV=1[more]
DH16B_ORYSJ5.0e-2147.88Dehydrin Rab16B OS=Oryza sativa subsp. japonica GN=RAB16B PE=2 SV=1[more]
DHB_CRAPL8.5e-2151.14Desiccation-related protein clone PCC6-19 OS=Craterostigma plantagineum PE=2 SV=... [more]
DH16C_ORYSI1.1e-2050.64Dehydrin Rab16C OS=Oryza sativa subsp. indica GN=RAB16C PE=2 SV=1[more]
BLAST of Cp4.1LG01g06900 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWM9_CUCSA5.3e-6274.32Uncharacterized protein OS=Cucumis sativus GN=Csa_4G045040 PE=3 SV=1[more]
E7BXD9_JATCU1.8e-3357.80Dehydrin OS=Jatropha curcas GN=DHN-2 PE=2 SV=1[more]
H2EUU8_EUCGL9.1e-3053.14Dehydrin 3 (Fragment) OS=Eucalyptus globulus GN=DHN3 PE=2 SV=1[more]
Q76MG2_TOBAC2.2e-2855.93Dehydrin OS=Nicotiana tabacum GN=NtERD10B PE=2 SV=1[more]
B5TV66_CAMSI1.9e-2747.55Putative dehydrin OS=Camellia sinensis PE=2 SV=1[more]
BLAST of Cp4.1LG01g06900 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G66400.15.8e-2852.51 Dehydrin family protein[more]
AT2G21490.12.5e-1846.29 dehydrin LEA[more]
AT3G50980.12.7e-1749.65 dehydrin xero 1[more]
AT1G20440.13.4e-1252.63 cold-regulated 47[more]
AT3G50970.11.0e-0841.13 dehydrin family protein[more]
BLAST of Cp4.1LG01g06900 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659102400|ref|XP_008452109.1|2.6e-6274.32PREDICTED: dehydrin DHN1 [Cucumis melo][more]
gi|778690692|ref|XP_011653150.1|7.6e-6274.32PREDICTED: dehydrin DHN1-like [Cucumis sativus][more]
gi|821324823|ref|NP_001295638.1|2.5e-3357.80dehydrin Rab18-like [Jatropha curcas][more]
gi|373842083|gb|AEY77126.1|1.3e-2953.14dehydrin 3, partial [Eucalyptus globulus][more]
gi|747072535|ref|XP_011083184.1|2.9e-2954.76PREDICTED: LOW QUALITY PROTEIN: dehydrin DHN1 [Sesamum indicum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009415response to water
GO:0006950response to stress
Vocabulary: INTERPRO
TermDefinition
IPR000167Dehydrin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006950 response to stress
biological_process GO:0009415 response to water
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g06900.1Cp4.1LG01g06900.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000167DehydrinPFAMPF00257Dehydrincoord: 8..174
score: 1.5
NoneNo IPR availablePANTHERPTHR33346FAMILY NOT NAMEDcoord: 62..174
score: 8.8E-46coord: 8..44
score: 8.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g06900CmaCh04G007640Cucurbita maxima (Rimu)cmacpeB731
Cp4.1LG01g06900CmoCh16G006890Cucurbita moschata (Rifu)cmocpeB312
Cp4.1LG01g06900CmoCh04G008130Cucurbita moschata (Rifu)cmocpeB684
Cp4.1LG01g06900Cla014571Watermelon (97103) v1cpewmB420
Cp4.1LG01g06900ClCG07G008700Watermelon (Charleston Gray)cpewcgB412
Cp4.1LG01g06900Lsi07G002410Bottle gourd (USVL1VR-Ls)cpelsiB373
Cp4.1LG01g06900MELO3C016402.2Melon (DHL92) v3.6.1cpemedB496
Cp4.1LG01g06900Bhi01G001874Wax gourdcpewgoB0511
Cp4.1LG01g06900Carg14162Silver-seed gourdcarcpeB1303
Cp4.1LG01g06900Carg05752Silver-seed gourdcarcpeB1417
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g06900Cucurbita pepo (Zucchini)cpecpeB073
Cp4.1LG01g06900Cucurbita pepo (Zucchini)cpecpeB233
Cp4.1LG01g06900Cucurbita pepo (Zucchini)cpecpeB237
Cp4.1LG01g06900Cucurbita pepo (Zucchini)cpecpeB385
Cp4.1LG01g06900Cucumber (Gy14) v1cgycpeB0238
Cp4.1LG01g06900Cucumber (Gy14) v1cgycpeB0569
Cp4.1LG01g06900Cucurbita maxima (Rimu)cmacpeB350
Cp4.1LG01g06900Cucurbita maxima (Rimu)cmacpeB354
Cp4.1LG01g06900Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g06900Cucurbita maxima (Rimu)cmacpeB876
Cp4.1LG01g06900Cucurbita moschata (Rifu)cmocpeB316
Cp4.1LG01g06900Cucurbita moschata (Rifu)cmocpeB613
Cp4.1LG01g06900Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g06900Cucurbita moschata (Rifu)cmocpeB813
Cp4.1LG01g06900Wild cucumber (PI 183967)cpecpiB397
Cp4.1LG01g06900Wild cucumber (PI 183967)cpecpiB468
Cp4.1LG01g06900Cucumber (Chinese Long) v2cpecuB400
Cp4.1LG01g06900Watermelon (Charleston Gray)cpewcgB374
Cp4.1LG01g06900Watermelon (97103) v1cpewmB443
Cp4.1LG01g06900Melon (DHL92) v3.5.1cpemeB424
Cp4.1LG01g06900Melon (DHL92) v3.5.1cpemeB434
Cp4.1LG01g06900Cucumber (Gy14) v2cgybcpeB502
Cp4.1LG01g06900Cucumber (Gy14) v2cgybcpeB807
Cp4.1LG01g06900Melon (DHL92) v3.6.1cpemedB510
Cp4.1LG01g06900Silver-seed gourdcarcpeB1302
Cp4.1LG01g06900Silver-seed gourdcarcpeB1418
Cp4.1LG01g06900Cucumber (Chinese Long) v3cpecucB0497
Cp4.1LG01g06900Cucumber (Chinese Long) v3cpecucB0580
Cp4.1LG01g06900Wax gourdcpewgoB0510
Cp4.1LG01g06900Wax gourdcpewgoB0522