CmaCh04G007640 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G007640
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Dehydrin
Location	Cma_Chr04 : 3882339 .. 3883409 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGAAACTTGCTGAATTATTTGTCATCCATCCATCTCTGTTTTGTTTTTTGGGTTTTGAAAAATGTCGCATTTCCAATCTGGAACCGATCAGTATGGCAACCCCGTTCGCCAGACTGATGAATATGGCAACGTGATCCACGGGACCGGTCAGCACGTCGACCCGCATCACCGGACCGGTGAGTTCCGTGATACGGATCAGTATGGAAACCCGGTTCGGCGGGGCGGGGAGTACGGTGAACCGATCGGCACTGGTGGGACGTATGAGACTGGTGGCCACGGTGGCGTGGGTTATGGCGGAGGACACCAGCAGCAGCATAAGGAGCATGGGGGTATACTTCGTCGCTCTGGAAGCTCCAGTAGTTCCAGCTCGGTAAAATTTAATGTTATATGATTACTTTCATACACCAGTGTAAAAGAAACGATTTTTGAGTTTATAATAATAATAATAATAATAATGAGGTTGAAATTTCAGTCGGAAGATGATGGGCATGGAGGGAGGAGGAAGAAGGGGCTGAAAGAGAAGATAAAGGAGAAGCTGCCAGGGCATCATGACACGGCGCAGCAGCCACAGGCAACATCAACCACCACACCTGGCGGGTACTCCTCGGTGGAGCACGGCGGCCAATACGAGAAGAAGGGGATAATGGATAAGATCAAGGAGAAGTTGCCGGGACATAACTGAGAGGCGTCGCCCACCATATCTGGGTGTAGATATGATATTAATAAAGTGATAGCTGTGCGTGTAATGGGGACTTGTGTAGTGTGAGAGTTGGTATGGCTAAATAACGAGGGAGCGTGGTGGTCGGTTTGTGGTTGCTGCGTGTATTATGTCATTTATGGGTTTGATATATGTACGTCTCGTTTGTGTTCATCTATCTTCTACTTGGCCTGTTTTACGTTTCAAATCTACCTTCTTTTCCAACCTATAATTGCTAGAATCATAACCCCATAATACAAGATCAAATCATCCTTACGGGGATTTGATGATCAATTCTAAGTAATTATAAGGATGTTGAGCATCATAAAATTTAATCATCCGTAGGGATTAATAAATTTACTACATTTGGAG

mRNA sequence

TCTGAAACTTGCTGAATTATTTGTCATCCATCCATCTCTGTTTTGTTTTTTGGGTTTTGAAAAATGTCGCATTTCCAATCTGGAACCGATCAGTATGGCAACCCCGTTCGCCAGACTGATGAATATGGCAACGTGATCCACGGGACCGGTCAGCACGTCGACCCGCATCACCGGACCGGTGAGTTCCGTGATACGGATCAGTATGGAAACCCGGTTCGGCGGGGCGGGGAGTACGGTGAACCGATCGGCACTGGTGGGACGTATGAGACTGGTGGCCACGGTGGCGTGGGTTATGGCGGAGGACACCAGCAGCAGCATAAGGAGCATGGGGGTATACTTCGTCGCTCTGGAAGCTCCAGTAGTTCCAGCTCGTCGGAAGATGATGGGCATGGAGGGAGGAGGAAGAAGGGGCTGAAAGAGAAGATAAAGGAGAAGCTGCCAGGGCATCATGACACGGCGCAGCAGCCACAGGCAACATCAACCACCACACCTGGCGGGTACTCCTCGGTGGAGCACGGCGGCCAATACGAGAAGAAGGGGATAATGGATAAGATCAAGGAGAAGTTGCCGGGACATAACTGAGAGGCGTCGCCCACCATATCTGGGTGTAGATATGATATTAATAAAGTGATAGCTGTGCGTGTAATGGGGACTTGTGTAGTGTGAGAGTTGGTATGGCTAAATAACGAGGGAGCGTGGTGGTCGGTTTGTGGTTGCTGCGTGTATTATGTCATTTATGGGTTTGATATATGTACGTCTCGTTTGTGTTCATCTATCTTCTACTTGGCCTGTTTTACGTTTCAAATCTACCTTCTTTTCCAACCTATAATTGCTAGAATCATAACCCCATAATACAAGATCAAATCATCCTTACGGGGATTTGATGATCAATTCTAAGTAATTATAAGGATGTTGAGCATCATAAAATTTAATCATCCGTAGGGATTAATAAATTTACTACATTTGGAG

Coding sequence (CDS)

ATGTCGCATTTCCAATCTGGAACCGATCAGTATGGCAACCCCGTTCGCCAGACTGATGAATATGGCAACGTGATCCACGGGACCGGTCAGCACGTCGACCCGCATCACCGGACCGGTGAGTTCCGTGATACGGATCAGTATGGAAACCCGGTTCGGCGGGGCGGGGAGTACGGTGAACCGATCGGCACTGGTGGGACGTATGAGACTGGTGGCCACGGTGGCGTGGGTTATGGCGGAGGACACCAGCAGCAGCATAAGGAGCATGGGGGTATACTTCGTCGCTCTGGAAGCTCCAGTAGTTCCAGCTCGTCGGAAGATGATGGGCATGGAGGGAGGAGGAAGAAGGGGCTGAAAGAGAAGATAAAGGAGAAGCTGCCAGGGCATCATGACACGGCGCAGCAGCCACAGGCAACATCAACCACCACACCTGGCGGGTACTCCTCGGTGGAGCACGGCGGCCAATACGAGAAGAAGGGGATAATGGATAAGATCAAGGAGAAGTTGCCGGGACATAACTGA

Protein sequence

MSHFQSGTDQYGNPVRQTDEYGNVIHGTGQHVDPHHRTGEFRDTDQYGNPVRRGGEYGEPIGTGGTYETGGHGGVGYGGGHQQQHKEHGGILRRSGSSSSSSSSEDDGHGGRRKKGLKEKIKEKLPGHHDTAQQPQATSTTTPGGYSSVEHGGQYEKKGIMDKIKEKLPGHN

Homology

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BLAST of CmaCh04G007640 vs. Swiss-Prot
Match: DHR18_ARATH (Dehydrin Rab18 OS=Arabidopsis thaliana GN=RAB18 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.6e-25
Identity = 91/176 (51.70%), Postives = 107/176 (60.80%), Query Frame = 1


Query: 8   TDQYGNPVRQT-DEYGNVIHGTGQHVDPHHRTGEFRDTDQYGNPVRRGGEYGEPIGTGGT 67
           TD+YGNP++Q  DEYGN + G G         G       YG   +  G  G+  GTGG 
Sbjct: 13  TDEYGNPIQQQYDEYGNPMGGGGYGTGGG---GGATGGQGYGTGGQGYGSGGQGYGTGGQ 72

Query: 68  -YETG-GHGGVGYGGG-----HQQQHKEHGG----ILRRSGSSSSSSSSEDDGHGGRRKK 127
            Y TG G  G G GGG      +Q HKE GG    +L RSGS SSSSS EDDG GGRRKK
Sbjct: 73  GYGTGTGTEGFGTGGGARHHGQEQLHKESGGGLGGMLHRSGSGSSSSS-EDDGQGGRRKK 132

Query: 128 GLKEKIKEKLPGHHDTAQQPQATSTTTPGGYSSVEHGGQ-YEKKGIMDKIKEKLPG 171
           G+ +KIKEKLPGHHD + Q QA       GY +  +GG+ +EKKG+MDKIKEKLPG
Sbjct: 133 GITQKIKEKLPGHHDQSGQAQAMG-GMGSGYDAGGYGGEHHEKKGMMDKIKEKLPG 183

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BLAST of CmaCh04G007640 vs. Swiss-Prot
Match: DHN1_MAIZE (Dehydrin DHN1 OS=Zea mays GN=DHN1 PE=1 SV=2)

HSP 1 Score: 105.9 bits (263), Expect = 4.4e-22
Identity = 91/193 (47.15%), Postives = 99/193 (51.30%), Query Frame = 1


Query: 3   HFQSG-TDQYGNPVRQTDEYGNVIHGTGQHVDPHHRTGEFRDTDQYGNPVRRGGEYGEPI 62
           H ++G  DQYGNPV      G V HGTG      H TG                      
Sbjct: 11  HGRTGHVDQYGNPV------GGVEHGTG---GMRHGTGT--------------------- 70

Query: 63  GTGGTYETGGHGGVGYGGGHQQQHKEH---GGILRRSGSSSSSSSSEDDGHGGRRKKGLK 122
            TGG  + G HGG G GGG  Q  +E    GGIL RSGSSSSSSS EDDG GGRRKKG+K
Sbjct: 71  -TGGMGQLGEHGGAGMGGGQFQPAREEHKTGGILHRSGSSSSSSS-EDDGMGGRRKKGIK 130

Query: 123 EKIKEKLPGHHDTAQQPQATSTTTPGGYSSVEH-----------GGQY--------EKKG 173
           EKIKEKLPG H   +  Q  + TT G Y    H           GG Y        EKKG
Sbjct: 131 EKIKEKLPGGH---KDDQHATATTGGAYGQQGHTGSAYGQQGHTGGAYATGTEGTGEKKG 168

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BLAST of CmaCh04G007640 vs. Swiss-Prot
Match: DH16B_ORYSJ (Dehydrin Rab16B OS=Oryza sativa subsp. japonica GN=RAB16B PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.4e-22
Identity = 79/150 (52.67%), Postives = 86/150 (57.33%), Query Frame = 1


Query: 45  DQYGNPVRRGGEYG----EPIGTGGTYETGGHGGVGYGGGHQQQHKEH--GGILRRSGSS 104
           D YGNPV   G+YG     P G  G    GGH G G GG  Q   ++H  GGIL RSGSS
Sbjct: 16  DVYGNPVG-AGQYGGGATAPGGGHGAMGMGGHAGAGAGGQFQPAREDHKTGGILHRSGSS 75

Query: 105 SSSSSSEDDGHGGRRKKGLKEKIKEKLPG-----HHDT-----------AQQPQATSTTT 164
           SSSSSSEDDG GGRRKKG+KEKIKEKLPG     +H              QQ  A  T  
Sbjct: 76  SSSSSSEDDGMGGRRKKGIKEKIKEKLPGGNKGNNHQQQQMMGNTGGAYGQQGHAGMTGA 135

Query: 165 PGGYSSVEHGGQYEKKGIMDKIKEKLPGHN 173
             G    E+G   EKKG MDKIKEKLPG +
Sbjct: 136 GTGVHGAEYGNAGEKKGFMDKIKEKLPGQH 164

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BLAST of CmaCh04G007640 vs. Swiss-Prot
Match: DH16B_ORYSI (Dehydrin Rab16B OS=Oryza sativa subsp. indica GN=RAB16B PE=2 SV=2)

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-21
Identity = 78/150 (52.00%), Postives = 87/150 (58.00%), Query Frame = 1


Query: 45  DQYGNPVRRGGEYG----EPIGTGGTYETGGHGGVGYGGGHQ--QQHKEHGGILRRSGSS 104
           D YGNPV   G+YG     P G  G    GGH G G GG  Q  ++ ++ GGIL RSGSS
Sbjct: 16  DVYGNPVG-AGQYGGGATAPGGGHGAMGMGGHAGAGAGGQFQPAREDRKTGGILHRSGSS 75

Query: 105 SSSSSSEDDGHGGRRKKGLKEKIKEKLP-GHHDTAQQPQATSTTTPGGYS---------- 164
           SSSSSSEDDG GGRRKKG+KEKIKEKLP G+    QQ Q     T G Y           
Sbjct: 76  SSSSSSEDDGMGGRRKKGIKEKIKEKLPGGNKGNNQQQQQMMGNTGGAYGQQGHAGMTGA 135

Query: 165 -----SVEHGGQYEKKGIMDKIKEKLPGHN 173
                  E+G   EKKG MDKIKEKLPG +
Sbjct: 136 GTGVHGAEYGNAGEKKGFMDKIKEKLPGQH 164

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BLAST of CmaCh04G007640 vs. Swiss-Prot
Match: DH16C_ORYSJ (Dehydrin Rab16C OS=Oryza sativa subsp. japonica GN=RAB16C PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 6.4e-21
Identity = 80/155 (51.61%), Postives = 87/155 (56.13%), Query Frame = 1


Query: 45  DQYGNPVRRGGEYGEPIGTGGTYETGGHGGVGYGGGH-------QQQHKEH--GGILRRS 104
           D YGNPV   G+YG     G T   GGHG +G GG H       Q   +EH  GGIL RS
Sbjct: 16  DVYGNPV--AGQYGG----GATAPGGGHGVMGMGGHHAGAGGQFQPVKEEHKTGGILHRS 75

Query: 105 GSSSSSSSSEDDGHGGRRKKGLKEKIKEKLP-GHHDTAQQPQATSTTTPGGYS------- 164
           GSSSSSSSSEDDG GGRRKKG+KEKIKEKLP G+    QQ Q     T G Y        
Sbjct: 76  GSSSSSSSSEDDGMGGRRKKGIKEKIKEKLPGGNKGNNQQQQQMMGNTGGAYGQQGHAGM 135

Query: 165 ----------SVEHGGQYEKKGIMDKIKEKLPGHN 173
                       E+G   EKKG MDKIKEKLPG +
Sbjct: 136 TGAGTGTGVHGAEYGNTGEKKGFMDKIKEKLPGQH 164

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BLAST of CmaCh04G007640 vs. TrEMBL
Match: A0A0A0KWM9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G045040 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.8e-63
Identity = 135/180 (75.00%), Postives = 151/180 (83.89%), Query Frame = 1


Query: 1   MSHFQSG-TDQYGNPVRQTDEYGNVIHGTGQHVDPHHRTGEFRDTDQYGNPVRRGGE-YG 60
           M+H+QSG TDQYGNP+RQTDEYGNVI  TGQ+ DP  RTGEFR+TDQYGNP RR  + +G
Sbjct: 1   MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFG 60

Query: 61  EPIGTG------GTYETGGHGGVGYGGGHQQQHKEHGGILRRSGSSSSSSSSEDDGHGGR 120
            P+GTG      GTYET G+GG GYGGGH QQHKEHGGIL RSG SSSSSSSEDDGHGGR
Sbjct: 61  NPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSG-SSSSSSSEDDGHGGR 120

Query: 121 RKKGLKEKIKEKLPGHHDTAQQPQATSTTTPGGYSSVEHGGQYEKKGIMDKIKEKLPGHN 173
           RKKGLKEK+KEKLPGHH    + QA STTTPGGY+S E+GGQ+EKKGIM+KIKEKLPGH+
Sbjct: 121 RKKGLKEKVKEKLPGHH--RHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLPGHH 177

[Close]

BLAST of CmaCh04G007640 vs. TrEMBL
Match: E7BXD9_JATCU (Dehydrin OS=Jatropha curcas GN=DHN-2 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.0e-33
Identity = 99/170 (58.24%), Postives = 113/170 (66.47%), Query Frame = 1


Query: 1   MSHFQSGTDQYGNPVRQTDEYGNVIHGTGQHVDPHHRTGEFRDTDQYGNPVRRGGEYGEP 60
           M+HFQ+   QYG  V  TDEYGN +   G+ +         R TD+YGNP+    + G  
Sbjct: 1   MAHFQN---QYG-AVNYTDEYGNPVDEYGRAI---------RQTDEYGNPIP---QTGTT 60

Query: 61  IGTGGTYETGGHGGVGYGGGHQQQHKEHGGILRRSGSSSSSSSSEDDGHGGRRKKGLKEK 120
              GG  ETG     G G GH+Q+H    G L RSGSSSSSSS EDDGHGGRRKKGLKEK
Sbjct: 61  TAYGGAPETGT---TGLGMGHRQEHYGESGQLHRSGSSSSSSS-EDDGHGGRRKKGLKEK 120

Query: 121 IKEKLPGHHDTAQQPQATSTTTPGGYSSVEHGGQYEKKGIMDKIKEKLPG 171
           IKEKLPGHH   ++ QATS TTPGGY S E+G  +EKKGIMDKIKEKLPG
Sbjct: 121 IKEKLPGHHKE-ERTQATSATTPGGYHSAEYGHDHEKKGIMDKIKEKLPG 149

[Close]

BLAST of CmaCh04G007640 vs. TrEMBL
Match: H2EUU8_EUCGL (Dehydrin 3 (Fragment) OS=Eucalyptus globulus GN=DHN3 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.0e-29
Identity = 91/172 (52.91%), Postives = 108/172 (62.79%), Query Frame = 1


Query: 1   MSHFQSGTDQYGNPV-RQTDEYGNVIHGTGQHVDPHHRTGEFRDTDQYGNPVRRGGEYGE 60
           M+HFQ+    Y +P  R+TDEYGN +                  TD+YGNP+R   EYG 
Sbjct: 1   MAHFQN---HYASPAGRRTDEYGNPV----------------TRTDEYGNPIRPADEYGN 60

Query: 61  PIGTGGTYETGGHGGVGYGGGHQQQHKEHGGILRRSG-SSSSSSSSEDDGHGGRRKKGLK 120
           P+     Y   GHG    G  H ++H   GG+LRRSG SSSSSSSSEDDGHGGRRKKG+K
Sbjct: 61  PV-----YPGTGHG---VGAEHGKEHHTLGGMLRRSGSSSSSSSSSEDDGHGGRRKKGIK 120

Query: 121 EKIKEKLPGHHDTAQQPQATSTTTPGGYSSVEHGGQYEKKGIMDKIKEKLPG 171
           EKIKEKLPG HD       T++TTP GY +   G  +EKKG+MDKIKEKLPG
Sbjct: 121 EKIKEKLPGRHDDTPS-HTTASTTPTGYHAT--GEPHEKKGVMDKIKEKLPG 142

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BLAST of CmaCh04G007640 vs. TrEMBL
Match: K4BAZ9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.8e-28
Identity = 87/154 (56.49%), Postives = 102/154 (66.23%), Query Frame = 1


Query: 31  HVDPHHRTGEFRDTDQYGNPVRRGGEYGEPIG-TGGTYETGGHGGVGYG----------G 90
           H +  +  G+   TD+YGNPVR+  EYG PI  TGGT    G  G GYG          G
Sbjct: 3   HYENQYSAGQALQTDEYGNPVRQTDEYGNPIQQTGGTMGEYGTTGTGYGTQAGHTSGVLG 62

Query: 91  GHQQQHKEHGGILRRSGSSSSSSSSEDDGHGGRRKK-GLKEKIKEKLPGHHDTAQQPQAT 150
           G Q+QH   GG+L RSGSSSSSSSSEDDGHGGRRKK G+K+K+KEKLPG H    Q  +T
Sbjct: 63  GEQRQHGTLGGMLHRSGSSSSSSSSEDDGHGGRRKKKGIKDKVKEKLPGGHRD-DQAHST 122

Query: 151 STTTPGGYSSVEHGGQYEKKGIMDKIKEKLPGHN 173
           +TTT  GY      G +EKKGIM+KIKEKLPGH+
Sbjct: 123 ATTTTTGYGME---GTHEKKGIMEKIKEKLPGHH 152

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BLAST of CmaCh04G007640 vs. TrEMBL
Match: M0ZVK5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400003531 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-27
Identity = 87/155 (56.13%), Postives = 101/155 (65.16%), Query Frame = 1


Query: 31  HVDPHHRTGEFRDTDQYGNPVRRGGEYGEPIG-TGGTYETGGHGGVGYG----------G 90
           H +  +  G+   TD+YGNPVR+  EYG PI  TGGT    G  G GYG          G
Sbjct: 3   HYENQYSAGQALQTDEYGNPVRQTDEYGNPIQQTGGTMGEYGTTGTGYGTQAGHTTGVLG 62

Query: 91  GHQQQHKEHGGILRRSGSSSSSSSSEDDGHGGRR-KKGLKEKIKEKLP-GHHDTAQQPQA 150
           G Q+QH   GG+L RSGSSSSSSSSEDDGHGGRR KKG+K+K+KEKLP GH D      A
Sbjct: 63  GEQRQHGTLGGMLHRSGSSSSSSSSEDDGHGGRRKKKGIKDKVKEKLPGGHRDDLAHSTA 122

Query: 151 TSTTTPGGYSSVEHGGQYEKKGIMDKIKEKLPGHN 173
           T+TTT  G       G +EKKGIM+KIKEKLPGH+
Sbjct: 123 TTTTTGYGME-----GTHEKKGIMEKIKEKLPGHH 152

[Close]

BLAST of CmaCh04G007640 vs. TAIR10
Match: AT5G66400.1 (AT5G66400.1 Dehydrin family protein)

HSP 1 Score: 115.5 bits (288), Expect = 3.2e-26
Identity = 91/176 (51.70%), Postives = 107/176 (60.80%), Query Frame = 1


Query: 8   TDQYGNPVRQT-DEYGNVIHGTGQHVDPHHRTGEFRDTDQYGNPVRRGGEYGEPIGTGGT 67
           TD+YGNP++Q  DEYGN + G G         G       YG   +  G  G+  GTGG 
Sbjct: 13  TDEYGNPIQQQYDEYGNPMGGGGYGTGGG---GGATGGQGYGTGGQGYGSGGQGYGTGGQ 72

Query: 68  -YETG-GHGGVGYGGG-----HQQQHKEHGG----ILRRSGSSSSSSSSEDDGHGGRRKK 127
            Y TG G  G G GGG      +Q HKE GG    +L RSGS SSSSS EDDG GGRRKK
Sbjct: 73  GYGTGTGTEGFGTGGGARHHGQEQLHKESGGGLGGMLHRSGSGSSSSS-EDDGQGGRRKK 132

Query: 128 GLKEKIKEKLPGHHDTAQQPQATSTTTPGGYSSVEHGGQ-YEKKGIMDKIKEKLPG 171
           G+ +KIKEKLPGHHD + Q QA       GY +  +GG+ +EKKG+MDKIKEKLPG
Sbjct: 133 GITQKIKEKLPGHHDQSGQAQAMG-GMGSGYDAGGYGGEHHEKKGMMDKIKEKLPG 183

[Close]

BLAST of CmaCh04G007640 vs. TAIR10
Match: AT3G50980.1 (AT3G50980.1 dehydrin xero 1)

HSP 1 Score: 88.6 bits (218), Expect = 4.1e-18
Identity = 68/128 (53.12%), Postives = 76/128 (59.38%), Query Frame = 1


Query: 45  DQYGNPVRRGGEYGEPIGTGGTYETGGHGGVGYGGGHQQQHKEHGGILRRSGSSSSSSSS 104
           DQ+GNP         P  TG     GG   V  GGG         G+L RSGSSSSSSS 
Sbjct: 18  DQFGNPF--------PATTGAYGTAGGAPAVAEGGGLS-------GMLHRSGSSSSSSS- 77

Query: 105 EDDGHGGRR--KKGLKEKIKEKLPGHHDTAQQPQATSTTTPGGYSSVEHGGQYEKKGIMD 164
           EDDG GGRR  KKG+ EKIKEKLPGHHD+ +     STTT     +V H    EKKG+M+
Sbjct: 78  EDDGLGGRRRKKKGITEKIKEKLPGHHDSNKTSSLGSTTTAYDTGTVHH----EKKGMME 125

Query: 165 KIKEKLPG 171
           KIKEKLPG
Sbjct: 138 KIKEKLPG 125

[Close]

BLAST of CmaCh04G007640 vs. TAIR10
Match: AT2G21490.1 (AT2G21490.1 dehydrin LEA)

HSP 1 Score: 88.6 bits (218), Expect = 4.1e-18
Identity = 77/180 (42.78%), Postives = 94/180 (52.22%), Query Frame = 1


Query: 9   DQYGNPVRQTDEYGN-VIHGTGQHVDPHHRTGEFRDTDQYG---------NPVRRGGEY- 68
           D+ GNP+  TD  GN ++  T +H +P + TG    T Q+          +P    GE  
Sbjct: 6   DEKGNPIHLTDTQGNPIVDLTDEHGNPMYLTGVVSSTPQHKESTTSDIAEHPTSTVGETH 65

Query: 69  --GEPIGTGGTYE---TGGHGGVGYGGGHQQQHKEHGGILRRSGSSSSSSSSEDDGHGGR 128
               P G G       TG   G G     QQ H      LRRSGSSSSSSS EDDG GGR
Sbjct: 66  PAAAPAGAGAATAATATGVSAGTGATTTGQQHHGSLEEHLRRSGSSSSSSS-EDDGQGGR 125

Query: 129 RKKGLKEKIKEKLPGHHDTAQQPQATSTTTPGGYSSVEHGGQYEKKGIMDKIKEKLPGHN 173
           RKK +KEKIKEK        +Q  AT+TTT    +   H    EKKGI++KIK+KLPGH+
Sbjct: 126 RKKSIKEKIKEKFGSGKHKDEQTPATATTTGPATTDQPH----EKKGILEKIKDKLPGHH 180

[Close]

BLAST of CmaCh04G007640 vs. TAIR10
Match: AT1G20440.1 (AT1G20440.1 cold-regulated 47)

HSP 1 Score: 68.9 bits (167), Expect = 3.4e-12
Identity = 50/95 (52.63%), Postives = 59/95 (62.11%), Query Frame = 1


Query: 92  LRRSGSSSSSSSSEDDGH----------GGRRKKGLKEKIKEKLPGHHD-TAQQ--PQAT 151
           L RS SSSSSSS E+             G   KKGL EKIKEKLPGHHD TA+   P +T
Sbjct: 104 LHRSNSSSSSSSDEEGEEKKEKKKKIVEGEEDKKGLVEKIKEKLPGHHDKTAEDDVPVST 163

Query: 152 STTTPGGYSSVEHG-GQYEKKGIMDKIKEKLPGHN 173
           +   P   S VEH   + EKKG+++KIKEKLPGH+
Sbjct: 164 TIPVPVSESVVEHDHPEEEKKGLVEKIKEKLPGHH 198

[Close]

BLAST of CmaCh04G007640 vs. TAIR10
Match: AT1G76180.1 (AT1G76180.1 Dehydrin family protein)

HSP 1 Score: 53.1 bits (126), Expect = 1.9e-07
Identity = 42/102 (41.18%), Postives = 50/102 (49.02%), Query Frame = 1


Query: 92  LRRSGSSSSSSSSEDDGHGGRRKK-------------------GLKEKIKEKLPGHH--D 151
           L RS SSSSSSS E+   G +RKK                   G  EK+KEKLPGH   +
Sbjct: 74  LHRSDSSSSSSSEEEGSDGEKRKKKKEKKKPTTEVEVKEEEKKGFMEKLKEKLPGHKKPE 133

Query: 152 TAQQPQATSTTTPGGYSSVEHGGQYEKKGIMDKIKEKLPGHN 173
                 A     P     VE     EKKGI++KIKEKLPG++
Sbjct: 134 DGSAVAAAPVVVP---PPVEEAHPVEKKGILEKIKEKLPGYH 172

[Close]

BLAST of CmaCh04G007640 vs. NCBI nr
Match: gi|659102400|ref|XP_008452109.1| (PREDICTED: dehydrin DHN1 [Cucumis melo])

HSP 1 Score: 251.5 bits (641), Expect = 1.0e-63
Identity = 136/180 (75.56%), Postives = 151/180 (83.89%), Query Frame = 1


Query: 1   MSHFQSG-TDQYGNPVRQTDEYGNVIHGTGQHVDPHHRTGEFRDTDQYGNPVRRGGE-YG 60
           M+H+QSG TDQYGNP+RQTDEYGNVI  TGQ+ DP  RTGEFR+TDQYGNPVRR  + +G
Sbjct: 1   MAHYQSGGTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPVRRTDDVFG 60

Query: 61  EPIGTG------GTYETGGHGGVGYGGGHQQQHKEHGGILRRSGSSSSSSSSEDDGHGGR 120
            P+GTG      GTYET G+GG GYGGGH QQHKEHGGIL RSG SSSSSSSEDDGHGGR
Sbjct: 61  NPVGTGTGMGTGGTYETSGYGGAGYGGGHHQQHKEHGGILHRSG-SSSSSSSEDDGHGGR 120

Query: 121 RKKGLKEKIKEKLPGHHDTAQQPQATSTTTPGGYSSVEHGGQYEKKGIMDKIKEKLPGHN 173
           RKKGLKEK+KEKLPG H    + QA STTTPGGY+S EHGGQ+EKKGIM+KIKEKLPGH+
Sbjct: 121 RKKGLKEKVKEKLPGRHH--HEGQAVSTTTPGGYASAEHGGQHEKKGIMEKIKEKLPGHH 177

[Close]

BLAST of CmaCh04G007640 vs. NCBI nr
Match: gi|778690692|ref|XP_011653150.1| (PREDICTED: dehydrin DHN1-like [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 4.0e-63
Identity = 135/180 (75.00%), Postives = 151/180 (83.89%), Query Frame = 1


Query: 1   MSHFQSG-TDQYGNPVRQTDEYGNVIHGTGQHVDPHHRTGEFRDTDQYGNPVRRGGE-YG 60
           M+H+QSG TDQYGNP+RQTDEYGNVI  TGQ+ DP  RTGEFR+TDQYGNP RR  + +G
Sbjct: 1   MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFG 60

Query: 61  EPIGTG------GTYETGGHGGVGYGGGHQQQHKEHGGILRRSGSSSSSSSSEDDGHGGR 120
            P+GTG      GTYET G+GG GYGGGH QQHKEHGGIL RSG SSSSSSSEDDGHGGR
Sbjct: 61  NPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSG-SSSSSSSEDDGHGGR 120

Query: 121 RKKGLKEKIKEKLPGHHDTAQQPQATSTTTPGGYSSVEHGGQYEKKGIMDKIKEKLPGHN 173
           RKKGLKEK+KEKLPGHH    + QA STTTPGGY+S E+GGQ+EKKGIM+KIKEKLPGH+
Sbjct: 121 RKKGLKEKVKEKLPGHH--RHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLPGHH 177

[Close]

BLAST of CmaCh04G007640 vs. NCBI nr
Match: gi|821324823|ref|NP_001295638.1| (dehydrin Rab18-like [Jatropha curcas])

HSP 1 Score: 151.4 bits (381), Expect = 1.5e-33
Identity = 99/170 (58.24%), Postives = 113/170 (66.47%), Query Frame = 1


Query: 1   MSHFQSGTDQYGNPVRQTDEYGNVIHGTGQHVDPHHRTGEFRDTDQYGNPVRRGGEYGEP 60
           M+HFQ+   QYG  V  TDEYGN +   G+ +         R TD+YGNP+    + G  
Sbjct: 1   MAHFQN---QYG-AVNYTDEYGNPVDEYGRAI---------RQTDEYGNPIP---QTGTT 60

Query: 61  IGTGGTYETGGHGGVGYGGGHQQQHKEHGGILRRSGSSSSSSSSEDDGHGGRRKKGLKEK 120
              GG  ETG     G G GH+Q+H    G L RSGSSSSSSS EDDGHGGRRKKGLKEK
Sbjct: 61  TAYGGAPETGT---TGLGMGHRQEHYGESGQLHRSGSSSSSSS-EDDGHGGRRKKGLKEK 120

Query: 121 IKEKLPGHHDTAQQPQATSTTTPGGYSSVEHGGQYEKKGIMDKIKEKLPG 171
           IKEKLPGHH   ++ QATS TTPGGY S E+G  +EKKGIMDKIKEKLPG
Sbjct: 121 IKEKLPGHHKE-ERTQATSATTPGGYHSAEYGHDHEKKGIMDKIKEKLPG 149

[Close]

BLAST of CmaCh04G007640 vs. NCBI nr
Match: gi|373842083|gb|AEY77126.1| (dehydrin 3, partial [Eucalyptus globulus])

HSP 1 Score: 137.1 bits (344), Expect = 2.9e-29
Identity = 91/172 (52.91%), Postives = 108/172 (62.79%), Query Frame = 1


Query: 1   MSHFQSGTDQYGNPV-RQTDEYGNVIHGTGQHVDPHHRTGEFRDTDQYGNPVRRGGEYGE 60
           M+HFQ+    Y +P  R+TDEYGN +                  TD+YGNP+R   EYG 
Sbjct: 1   MAHFQN---HYASPAGRRTDEYGNPV----------------TRTDEYGNPIRPADEYGN 60

Query: 61  PIGTGGTYETGGHGGVGYGGGHQQQHKEHGGILRRSG-SSSSSSSSEDDGHGGRRKKGLK 120
           P+     Y   GHG    G  H ++H   GG+LRRSG SSSSSSSSEDDGHGGRRKKG+K
Sbjct: 61  PV-----YPGTGHG---VGAEHGKEHHTLGGMLRRSGSSSSSSSSSEDDGHGGRRKKGIK 120

Query: 121 EKIKEKLPGHHDTAQQPQATSTTTPGGYSSVEHGGQYEKKGIMDKIKEKLPG 171
           EKIKEKLPG HD       T++TTP GY +   G  +EKKG+MDKIKEKLPG
Sbjct: 121 EKIKEKLPGRHDDTPS-HTTASTTPTGYHAT--GEPHEKKGVMDKIKEKLPG 142

[Close]

BLAST of CmaCh04G007640 vs. NCBI nr
Match: gi|460373254|ref|XP_004232436.1| (PREDICTED: desiccation-related protein clone PCC6-19-like [Solanum lycopersicum])

HSP 1 Score: 133.7 bits (335), Expect = 3.2e-28
Identity = 92/166 (55.42%), Postives = 106/166 (63.86%), Query Frame = 1


Query: 8   TDQYGNPVRQTDEYGNVIHGTGQHVDPHHRTGEFRDTDQYGNPVRRGGEYGEPIGTGGTY 67
           TD+YGNPVRQTDEYGN I  TG  +  +  TG        G   + G   G   GTG  Y
Sbjct: 16  TDEYGNPVRQTDEYGNPIQQTGGTMGEYGTTGT-------GYGTQAGHTTGVLGGTGTGY 75

Query: 68  ETGGHGGVGYGGGHQQQHKEHGGILRRSGSSSSSSSSEDDGHGGRRKK-GLKEKIKEKLP 127
            T      G  GG Q+QH   GG+L RSGSSSSSSSSEDDGHGGRRKK G+K+K+KEKLP
Sbjct: 76  GTQAGHTSGVLGGEQRQHGTLGGMLHRSGSSSSSSSSEDDGHGGRRKKKGIKDKVKEKLP 135

Query: 128 GHHDTAQQPQATSTTTPGGYSSVEHGGQYEKKGIMDKIKEKLPGHN 173
           G H    Q  +T+TTT  GY      G +EKKGIM+KIKEKLPGH+
Sbjct: 136 GGHRD-DQAHSTATTTTTGYGME---GTHEKKGIMEKIKEKLPGHH 170

The following BLAST results are available for this feature:

BLAST of CmaCh04G007640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DHR18_ARATH	5.6e-25	51.70	Dehydrin Rab18 OS=Arabidopsis thaliana GN=RAB18 PE=2 SV=1	[more]
DHN1_MAIZE	4.4e-22	47.15	Dehydrin DHN1 OS=Zea mays GN=DHN1 PE=1 SV=2	[more]
DH16B_ORYSJ	4.4e-22	52.67	Dehydrin Rab16B OS=Oryza sativa subsp. japonica GN=RAB16B PE=2 SV=1	[more]
DH16B_ORYSI	1.3e-21	52.00	Dehydrin Rab16B OS=Oryza sativa subsp. indica GN=RAB16B PE=2 SV=2	[more]
DH16C_ORYSJ	6.4e-21	51.61	Dehydrin Rab16C OS=Oryza sativa subsp. japonica GN=RAB16C PE=2 SV=1	[more]

BLAST of CmaCh04G007640 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWM9_CUCSA	2.8e-63	75.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G045040 PE=3 SV=1	[more]
E7BXD9_JATCU	1.0e-33	58.24	Dehydrin OS=Jatropha curcas GN=DHN-2 PE=2 SV=1	[more]
H2EUU8_EUCGL	2.0e-29	52.91	Dehydrin 3 (Fragment) OS=Eucalyptus globulus GN=DHN3 PE=2 SV=1	[more]
K4BAZ9_SOLLC	3.8e-28	56.49	Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1	[more]
M0ZVK5_SOLTU	1.1e-27	56.13	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400003531 PE=3 SV=1	[more]

BLAST of CmaCh04G007640 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G66400.1	3.2e-26	51.70	Dehydrin family protein	[more]
AT3G50980.1	4.1e-18	53.13	dehydrin xero 1	[more]
AT2G21490.1	4.1e-18	42.78	dehydrin LEA	[more]
AT1G20440.1	3.4e-12	52.63	cold-regulated 47	[more]
AT1G76180.1	1.9e-07	41.18	Dehydrin family protein	[more]

BLAST of CmaCh04G007640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102400\|ref\|XP_008452109.1\|	1.0e-63	75.56	PREDICTED: dehydrin DHN1 [Cucumis melo]	[more]
gi\|778690692\|ref\|XP_011653150.1\|	4.0e-63	75.00	PREDICTED: dehydrin DHN1-like [Cucumis sativus]	[more]
gi\|821324823\|ref\|NP_001295638.1\|	1.5e-33	58.24	dehydrin Rab18-like [Jatropha curcas]	[more]
gi\|373842083\|gb\|AEY77126.1\|	2.9e-29	52.91	dehydrin 3, partial [Eucalyptus globulus]	[more]
gi\|460373254\|ref\|XP_004232436.1\|	3.2e-28	55.42	PREDICTED: desiccation-related protein clone PCC6-19-like [Solanum lycopersicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000167	Dehydrin

Vocabulary: **Biological Process**
Term	Definition
GO:0006950	response to stress
GO:0009415	response to water

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006950	response to stress
biological_process	GO:0009415	response to water
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G007640.1	CmaCh04G007640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000167	Dehydrin	PFAM	PF00257	Dehydrin	coord: 8..171 score: 2.1
None	No IPR available	PANTHER	PTHR33346	FAMILY NOT NAMED	coord: 8..171 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G007640	Cp4.1LG01g06900	Cucurbita pepo (Zucchini)	cmacpeB731
CmaCh04G007640	Carg14162	Silver-seed gourd	carcmaB1288
CmaCh04G007640	Carg05752	Silver-seed gourd	carcmaB1414

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G007640	Watermelon (97103) v2	cmawmbB774
CmaCh04G007640	Wax gourd	cmawgoB0846
CmaCh04G007640	Cucurbita maxima (Rimu)	cmacmaB350
CmaCh04G007640	Cucurbita maxima (Rimu)	cmacmaB546
CmaCh04G007640	Cucumber (Gy14) v1	cgycmaB0246
CmaCh04G007640	Cucumber (Gy14) v1	cgycmaB0596
CmaCh04G007640	Cucurbita moschata (Rifu)	cmacmoB700
CmaCh04G007640	Cucurbita moschata (Rifu)	cmacmoB727
CmaCh04G007640	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G007640	Wild cucumber (PI 183967)	cmacpiB721
CmaCh04G007640	Wild cucumber (PI 183967)	cmacpiB785
CmaCh04G007640	Cucumber (Chinese Long) v2	cmacuB713
CmaCh04G007640	Melon (DHL92) v3.5.1	cmameB694
CmaCh04G007640	Melon (DHL92) v3.5.1	cmameB710
CmaCh04G007640	Watermelon (Charleston Gray)	cmawcgB639
CmaCh04G007640	Watermelon (Charleston Gray)	cmawcgB668
CmaCh04G007640	Watermelon (97103) v1	cmawmB677
CmaCh04G007640	Watermelon (97103) v1	cmawmB715
CmaCh04G007640	Cucurbita pepo (Zucchini)	cmacpeB714
CmaCh04G007640	Cucurbita pepo (Zucchini)	cmacpeB702
CmaCh04G007640	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G007640	Cucurbita pepo (Zucchini)	cmacpeB741
CmaCh04G007640	Bottle gourd (USVL1VR-Ls)	cmalsiB698
CmaCh04G007640	Cucumber (Gy14) v2	cgybcmaB547
CmaCh04G007640	Melon (DHL92) v3.6.1	cmamedB782
CmaCh04G007640	Cucumber (Chinese Long) v3	cmacucB0847
CmaCh04G007640	Watermelon (97103) v2	cmawmbB712