Bhi01G001874 (gene) Wax gourd

NameBhi01G001874
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr1 : 58655060 .. 58655377 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACATTACCAGAACCAGTACAGCGCAAAATCTGGAACCGACCAGTACGGCTACCCAATTCGCCAGACCGACGAATACGGCAATGTCATCTCCGAGTCCGGCCAGTATGCCGACACCCGCCACCGGACCGACGAATTCCGCGAGACCGACCAGTACGGCAACCCGATTCGTCGTAGCGACGAGCAGCAGCAGGGTGGAATATTTCATCATGATAAGACGGTGACAACCACGAGGGCGGAGAAGGGCGGTGAGCATCACGAGAAGAAGGGTATAATGGAGAAGATTAAGGAGAAGTTGCCGGGAGGACACCATTAA

mRNA sequence

ATGGCACATTACCAGAACCAGTACAGCGCAAAATCTGGAACCGACCAGTACGGCTACCCAATTCGCCAGACCGACGAATACGGCAATGTCATCTCCGAGTCCGGCCAGTATGCCGACACCCGCCACCGGACCGACGAATTCCGCGAGACCGACCAGTACGGCAACCCGATTCGTCGTAGCGACGAGCAGCAGCAGGGTGGAATATTTCATCATGATAAGACGGTGACAACCACGAGGGCGGAGAAGGGCGGTGAGCATCACGAGAAGAAGGGTATAATGGAGAAGATTAAGGAGAAGTTGCCGGGAGGACACCATTAA

Coding sequence (CDS)

ATGGCACATTACCAGAACCAGTACAGCGCAAAATCTGGAACCGACCAGTACGGCTACCCAATTCGCCAGACCGACGAATACGGCAATGTCATCTCCGAGTCCGGCCAGTATGCCGACACCCGCCACCGGACCGACGAATTCCGCGAGACCGACCAGTACGGCAACCCGATTCGTCGTAGCGACGAGCAGCAGCAGGGTGGAATATTTCATCATGATAAGACGGTGACAACCACGAGGGCGGAGAAGGGCGGTGAGCATCACGAGAAGAAGGGTATAATGGAGAAGATTAAGGAGAAGTTGCCGGGAGGACACCATTAA

Protein sequence

MAHYQNQYSAKSGTDQYGYPIRQTDEYGNVISESGQYADTRHRTDEFRETDQYGNPIRRSDEQQQGGIFHHDKTVTTTRAEKGGEHHEKKGIMEKIKEKLPGGHH
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009415response to water
GO:0006950response to stress
Vocabulary: INTERPRO
TermDefinition
IPR030513Dehydrin_CS
IPR000167Dehydrin
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006950 response to stress
biological_process GO:0009415 response to water
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M001874Bhi01M001874mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000167DehydrinPFAMPF00257Dehydrincoord: 61..104
e-value: 2.6E-9
score: 37.7
IPR000167DehydrinPANTHERPTHR33346FAMILY NOT NAMEDcoord: 74..104
IPR000167DehydrinPANTHERPTHR33346FAMILY NOT NAMEDcoord: 1..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availablePANTHERPTHR33346:SF9SUBFAMILY NOT NAMEDcoord: 74..104
NoneNo IPR availablePANTHERPTHR33346:SF9SUBFAMILY NOT NAMEDcoord: 1..33
IPR030513Dehydrin, conserved sitePROSITEPS00823DEHYDRIN_2coord: 95..102

The following gene(s) are paralogous to this gene:

None