Cp4.1LG01g06250 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATCATCCACTTCGGTTTTCTCTCTCTTGTACCTTTCTCTCTCTCTCCTCCCCCACCTCTTAAAACTGCCTATTTCTTCTTCTTCTTGGTTTGCAAAGCTTCATCAACAGACTTCCATGGCGGTTCTACCAACCAACTCTTCAAGATTGGATCTCACCATCTCTGTACCCGGCTTCACTTCATTCTCATCATCACCACTTCCTCCATCTGGTACACCAACATCTTTCTTTTTCGGTTTTAATAGAGTACGAATAAATGATTAAATACATGGTACCATGTGGAGTGAATTTTTTAAAATTAATTTTTAGTAGTGATTTTAAGTATTAAAAGTGTTACAATAAGTTTTGAATGGATGATTGAAGGTGTAATAATTTTTGGTTGCAGCGGTGCGAGATTTGGACATGAATAGAGCGCCGGATGAAGAGGAATGGATGATGGGAAGCATGGAGGAAGATGAAGAAAACAACAGTGGAAGCCATCCAAGGAAGAAGCTACGTTTAACAAAGGAACAGTCTCATCTTCTTGAACAAAGCTTCAGACAAAACCATACCTTAAACCCAGTACTACAATTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCTTTATTTTAATCTCTCAAAACCCCAATATTTCAATACCTTTTTTCCTCCATTTCTTTTTTTGGTTAGAAACAAAAGGAGACTCTTGCGGAAGTGCTGAAGCTGAAGCCAAGGCAGGTTGAGGTTTGGTTTCAGAACCGAAGGGCCAGGTGAATCAACTTATATCCTATGCATGTTTTGGTGATTCTATTATAATTCTTCAGAACCTAACAAAGGAAAGATTTAATCCAAACTAAAAGAGGAGGAGGTTTGAGAAGGAACAGGAATAGGAATAGGAATAGGGATAATCCACAAACAAGTGTTGTTAATTAAACTATATAACATAATGTTGTCCGCTTCCATAAAATAATAATAATAATGGAATTATGGGGTAAGATATGCAACGCCACCAAGAGACAATAGGTGAGCAAAATTATGAACTAGTTATGATGTGGTTTCCCCATGAGTTTAAATATTTCAATAACACATACAATGTCGAGGCTGCTCCCCCTCGCCGCCTCGTGTGTGTGTGTGGCTTCACTGCCCATATGCATATCATATTATATATTTTATTCCATCTTTTTCCTTACCCATATGTGTATCACCTCAACATTTGCATATCTATCTAATTCTCCTATGTGTTGGATTCCGAGTATTAAAATCATTCAAGTTTCGAAGCCATTACAACTCATTATTGTGTCACCCTATTATGGGTACAAAAATTATGGGTACAAAGATGAAGTGAAAATAAGGTGATTAAAGTAAATTTGCATACACCATTTAATTTGGTTGGGTAATAATTAGAATCCAAGAAGACAATAATGATGTTCTTGTCTTTCATGTAAAAGGGTTTCAATTTGCATTTATTTCACTTTCATGTATCTTTTTTGTTACCCACAATTATTCGTATTTTTTGTAGTCACAACATACTATTTTTCAAACTATATTATTATTGCATTTACTTTTGCTTTTGTATTAATTAAGCATTTATTTGGGTGTGAATTTAAAAAACAAAATAATATATCCATAATCACTCCATTAATTTGATTTACATTTAATTATTCATTAGGAGCAAGCTGAAGCAGACCGAGATGGAGTGCGAGTATCTGAAGAGATGGTTCGGGCTCTTGACGGAGCAAAACAAGAAACTGCAGAAGGAGGTGGAGGAGCTGAGGGCGATGAAGGTGGCGCCCCCGACGGTGATTTCACCACACAGCTGCGAGCCGCTGCCGGCGTCGAACCTCACAATGTGTCCACGCTGCGAGCGCGTGACCACTACCACCCTCGACAAGACCCGCATTGTCGTTTAAGCTGGTCGGCCGCTGCCCATTATTGCCTTTTTTTTTTT CATCATCCACTTCGGTTTTCTCTCTCTTGTACCTTTCTCTCTCTCTCCTCCCCCACCTCTTAAAACTGCCTATTTCTTCTTCTTCTTGGTTTGCAAAGCTTCATCAACAGACTTCCATGGCGGTTCTACCAACCAACTCTTCAAGATTGGATCTCACCATCTCTGTACCCGGCTTCACTTCATTCTCATCATCACCACTTCCTCCATCTGCGGTGCGAGATTTGGACATGAATAGAGCGCCGGATGAAGAGGAATGGATGATGGGAAGCATGGAGGAAGATGAAGAAAACAACAGTGGAAGCCATCCAAGGAAGAAGCTACGTTTAACAAAGGAACAGTCTCATCTTCTTGAACAAAGCTTCAGACAAAACCATACCTTAAACCCAAAACAAAAGGAGACTCTTGCGGAAGTGCTGAAGCTGAAGCCAAGGCAGGTTGAGGTTTGGTTTCAGAACCGAAGGGCCAGGAGCAAGCTGAAGCAGACCGAGATGGAGTGCGAGTATCTGAAGAGATGGTTCGGGCTCTTGACGGAGCAAAACAAGAAACTGCAGAAGGAGGTGGAGGAGCTGAGGGCGATGAAGGTGGCGCCCCCGACGGTGATTTCACCACACAGCTGCGAGCCGCTGCCGGCGTCGAACCTCACAATGTGTCCACGCTGCGAGCGCGTGACCACTACCACCCTCGACAAGACCCGCATTGTCGTTTAAGCTGGTCGGCCGCTGCCCATTATTGCCTTTTTTTTTTT ATGGCGGTTCTACCAACCAACTCTTCAAGATTGGATCTCACCATCTCTGTACCCGGCTTCACTTCATTCTCATCATCACCACTTCCTCCATCTGCGGTGCGAGATTTGGACATGAATAGAGCGCCGGATGAAGAGGAATGGATGATGGGAAGCATGGAGGAAGATGAAGAAAACAACAGTGGAAGCCATCCAAGGAAGAAGCTACGTTTAACAAAGGAACAGTCTCATCTTCTTGAACAAAGCTTCAGACAAAACCATACCTTAAACCCAAAACAAAAGGAGACTCTTGCGGAAGTGCTGAAGCTGAAGCCAAGGCAGGTTGAGGTTTGGTTTCAGAACCGAAGGGCCAGGAGCAAGCTGAAGCAGACCGAGATGGAGTGCGAGTATCTGAAGAGATGGTTCGGGCTCTTGACGGAGCAAAACAAGAAACTGCAGAAGGAGGTGGAGGAGCTGAGGGCGATGAAGGTGGCGCCCCCGACGGTGATTTCACCACACAGCTGCGAGCCGCTGCCGGCGTCGAACCTCACAATGTGTCCACGCTGCGAGCGCGTGACCACTACCACCCTCGACAAGACCCGCATTGTCGTTTAA MAVLPTNSSRLDLTISVPGFTSFSSSPLPPSAVRDLDMNRAPDEEEWMMGSMEEDEENNSGSHPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGLLTEQNKKLQKEVEELRAMKVAPPTVISPHSCEPLPASNLTMCPRCERVTTTTLDKTRIVV
BLAST of Cp4.1LG01g06250 vs. Swiss-Prot
Match: HOX3_ORYSJ (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=1 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 3.7e-57 Identity = 126/196 (64.29%), Postives = 151/196 (77.04%), Query Frame = 1
BLAST of Cp4.1LG01g06250 vs. Swiss-Prot
Match: HOX3_ORYSI (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica GN=HOX3 PE=1 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 3.7e-57 Identity = 126/196 (64.29%), Postives = 151/196 (77.04%), Query Frame = 1
BLAST of Cp4.1LG01g06250 vs. Swiss-Prot
Match: ATB17_ARATH (Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana GN=ATHB-17 PE=2 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.6e-55 Identity = 127/198 (64.14%), Postives = 142/198 (71.72%), Query Frame = 1
BLAST of Cp4.1LG01g06250 vs. Swiss-Prot
Match: ATHBX_ARATH (Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana GN=ATHB-X PE=2 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.1e-48 Identity = 118/192 (61.46%), Postives = 136/192 (70.83%), Query Frame = 1
BLAST of Cp4.1LG01g06250 vs. Swiss-Prot
Match: HOX17_ORYSI (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica GN=HOX17 PE=2 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.2e-34 Identity = 92/170 (54.12%), Postives = 120/170 (70.59%), Query Frame = 1
BLAST of Cp4.1LG01g06250 vs. TrEMBL
Match: A0A0A0KJE2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G065660 PE=4 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 7.9e-91 Identity = 178/198 (89.90%), Postives = 189/198 (95.45%), Query Frame = 1
BLAST of Cp4.1LG01g06250 vs. TrEMBL
Match: A0A0S3R2Y8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G269700 PE=4 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 6.8e-74 Identity = 147/187 (78.61%), Postives = 168/187 (89.84%), Query Frame = 1
BLAST of Cp4.1LG01g06250 vs. TrEMBL
Match: A0A061EF99_THECC (Homeobox-leucine zipper protein HOX3 OS=Theobroma cacao GN=TCM_010868 PE=4 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 6.8e-74 Identity = 154/201 (76.62%), Postives = 170/201 (84.58%), Query Frame = 1
BLAST of Cp4.1LG01g06250 vs. TrEMBL
Match: I1KM50_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G218000 PE=4 SV=2) HSP 1 Score: 281.2 bits (718), Expect = 9.8e-73 Identity = 144/187 (77.01%), Postives = 169/187 (90.37%), Query Frame = 1
BLAST of Cp4.1LG01g06250 vs. TrEMBL
Match: A0A0B0MRC6_GOSAR (Homeobox-leucine zipper HOX3 OS=Gossypium arboreum GN=F383_25892 PE=4 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 9.8e-73 Identity = 150/193 (77.72%), Postives = 165/193 (85.49%), Query Frame = 1
BLAST of Cp4.1LG01g06250 vs. TAIR10
Match: AT2G01430.1 (AT2G01430.1 homeobox-leucine zipper protein 17) HSP 1 Score: 217.2 bits (552), Expect = 8.8e-57 Identity = 127/198 (64.14%), Postives = 142/198 (71.72%), Query Frame = 1
BLAST of Cp4.1LG01g06250 vs. TAIR10
Match: AT1G70920.1 (AT1G70920.1 homeobox-leucine zipper protein 18) HSP 1 Score: 194.5 bits (493), Expect = 6.1e-50 Identity = 118/192 (61.46%), Postives = 136/192 (70.83%), Query Frame = 1
BLAST of Cp4.1LG01g06250 vs. TAIR10
Match: AT5G06710.1 (AT5G06710.1 homeobox from Arabidopsis thaliana) HSP 1 Score: 147.5 bits (371), Expect = 8.5e-36 Identity = 90/182 (49.45%), Postives = 118/182 (64.84%), Query Frame = 1
BLAST of Cp4.1LG01g06250 vs. TAIR10
Match: AT2G22800.1 (AT2G22800.1 Homeobox-leucine zipper protein family) HSP 1 Score: 143.7 bits (361), Expect = 1.2e-34 Identity = 85/172 (49.42%), Postives = 115/172 (66.86%), Query Frame = 1
BLAST of Cp4.1LG01g06250 vs. TAIR10
Match: AT2G44910.1 (AT2G44910.1 homeobox-leucine zipper protein 4) HSP 1 Score: 142.5 bits (358), Expect = 2.7e-34 Identity = 84/167 (50.30%), Postives = 113/167 (67.66%), Query Frame = 1
BLAST of Cp4.1LG01g06250 vs. NCBI nr
Match: gi|778698284|ref|XP_011654500.1| (PREDICTED: homeobox-leucine zipper protein HOX3-like isoform X1 [Cucumis sativus]) HSP 1 Score: 341.3 bits (874), Expect = 1.1e-90 Identity = 178/198 (89.90%), Postives = 189/198 (95.45%), Query Frame = 1
BLAST of Cp4.1LG01g06250 vs. NCBI nr
Match: gi|778698287|ref|XP_011654501.1| (PREDICTED: homeobox-leucine zipper protein HOX3-like isoform X2 [Cucumis sativus]) HSP 1 Score: 337.8 bits (865), Expect = 1.3e-89 Identity = 178/198 (89.90%), Postives = 189/198 (95.45%), Query Frame = 1
BLAST of Cp4.1LG01g06250 vs. NCBI nr
Match: gi|659109472|ref|XP_008454736.1| (PREDICTED: homeobox-leucine zipper protein HOX3-like isoform X1 [Cucumis melo]) HSP 1 Score: 337.0 bits (863), Expect = 2.2e-89 Identity = 177/198 (89.39%), Postives = 186/198 (93.94%), Query Frame = 1
BLAST of Cp4.1LG01g06250 vs. NCBI nr
Match: gi|659109474|ref|XP_008454737.1| (PREDICTED: homeobox-leucine zipper protein HOX3-like isoform X2 [Cucumis melo]) HSP 1 Score: 333.6 bits (854), Expect = 2.4e-88 Identity = 177/198 (89.39%), Postives = 186/198 (93.94%), Query Frame = 1
BLAST of Cp4.1LG01g06250 vs. NCBI nr
Match: gi|965658499|dbj|BAT74918.1| (hypothetical protein VIGAN_01269700 [Vigna angularis var. angularis]) HSP 1 Score: 285.0 bits (728), Expect = 9.7e-74 Identity = 147/187 (78.61%), Postives = 168/187 (89.84%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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