ClCG01G006050 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G006050
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionHomeobox-leucine zipper protein 17
LocationCG_Chr01 : 6708914 .. 6712294 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTTTTTCCTATCAACTCATCCAACTTGGATCTCTCCATTTCCATGCCGGGCTTTGCTTCTTCATCGACTCGTCCTCCGCTAAGTAAGCTTTCCATCACATCTACATGCATCAACAAATTTCATAAAACGATTAAGACATCAATAATCTTTCCTAATATCAGAAATTGGTTTGAATTTCCACTTTTTTCAATCATAATGCTACATATGTATATATATACACACATTTTCTTTTCTCATTTTAGTATATCTTTTAATTTAATAATGTTGGGTATGATAATTTTTTTTTTTTTTAATAAAATTATTCAAATGTCTTAATCACTAAACTATGTTTAGATTTGTCATGCTATTGCATGTTGATTAAAGTGAAAGTGAGAATTTGTGTAGTGAGAGAATTGGACATGAACCGAGTACCGACGAGAGGAGAAGCAGAAGAAGAATGGGCGGTGGCACCGAGCGCGGAGGAAGAGGAAGAAGAAAGTTGCATTAATAATGGAGGTACTAAGCCAAGGAAGAAGCTTCGCCTGTCAAAAGATCAGTCTCGTCTTCTTGAAGAAAGCTTTAGGCTCAATCATACATTAAACCCTGTTAGTCTTTATTTATTTTTTATTTTTTATTATTATTATAATATATGTGGGGTAGATCGAAGCTAGTTCATAAGTATAAGTTCATGTAAGTTGAGCTTGAACTCTCATGTCGGCTTTGAATTTGAATTGTTAGTTAATTCTGTGTATATATATGCATGTTTATTTATAAAAAAAAGCGTTTATTTATTTTACTGTATTTTTTTTGCAGAAGCAAAAGGAAGCATTGGCCATGGAGTTGAAGCTGAAGCCAAGACAAGTTGAAGTTTGGTTTCAGAATCGTAGGGCCAGGTTTGTATTTCTTTATTCATTTCTTAAGGTAATTAAGAAGTTAAACCAAAAGAATTTGAACTTTTAAATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTCTTTTATCAAAATATAGGATGTTTAAAGCGTTTCATTAGAACCCAAACAAAGGAACAAACAAACGGACACAAAATTATTACGTTGGTTTGATAACCATTTATTTTCTTTCTCACTCTTGTAAAATAGAAAAACAAAAAATAAACGTTTTTTTTTTCCTTCTCCTTCTAGTAAGGATTGCTTTCAAATATAGAAAATTAAATAAAAAGATATACAAATATAGCAAAATTTCATTATTTGTTTGTAAACTACAACTTTTAAGAGCATGTTCTTTTTAGTTCTAGGTTACATTGGAAGAATCAAACTTTTGTGATCTCTTGATCGTAAATATGTGTTATATCAATTGAGATATTATATGTTTACACATTGATCACTTTAAAAAAACATATTTTAAAAATTTGGTTAAAAAAGAAAGGAATAATGGTAGATACTATTGTTTTTCTAAATATAAAAAAAACCAAATTAGAAATAAACAAAGCTCAAAACCAAGTTATTACAAGCTTATGAATGAAAGAATAATTCACAAGTAACCATTTATTTATTTATTTATTTTTTTGAAAAAAGATAGCAGAGAGAAGTGGGATCACTAGGTGCACCCTTAGCACCTTCATTGTGTCCTGAAATGAGTAGAGATTTCATTCAAAATAATTCACAAGTAAACATTAAGATCTAGTTTGTTAAAAATTTTGGTTTTCTTTTTTAGTTTTCACCTTTTGAAATTTATGATGGTTTTCTCCTATTTTTTTACTATAATTTTACCCACTTGAATTTGGAGTCAAATTTGAAGAAAAAAACAAGTTTTTGAAAAGGATAAATTATAAAAAAAATGGCATTGAATTTTTTTGTGTAAAAAATACCTCTGTTTTCAAATTTCAAAAATATCCTTGAACTTTCAAAAATAGTTAAAAAATACCCTTACTATTAGTTTAAATTAAAAAAAGGTTATACATTAGTAATTGAGTTTATGTTATTTATTGTTTTGGTAAGTTTTAGAAAGAGATTTTGATTTTGAAATTTTGTGGGATTTTATACTTTTAATTGAAGTTTTGGTTTATATTTTGTTGTGAGAAAGTTGCTATAAGAATTGGACACAAGGGAGAAAAATGAGAGTATCTATAAAATTTTGTTTTAAAATTGGTATTTTTCAAATTCAAGAATGCTTCAAACAAATTGATTGATATACTAATGGTAGGAGCATCTTTACACTTTTTTTTTGGACAAGGTTAAGTGTATCAATCCAACTTTTGAAAGTTCAGAGATATTTTTGAAATTAATATTATTAGATTTGTGTTATATTTTTGAAATTAATATTATTAGGTTTGTGTTCATATACTAATCTAAGGATATTTTGAAGGTTTTTTTTTTGTTATTTTTTATTTTTTAAGTTTAAGGTTATTTTTTAATCTTTTGAAAGTTTAGAGTTATTTTTGGAACAAAACGCTAACAATTTCCATCTAAAACTAGCAATAAGGTTATTTTTGACCTATTTTTGAAAGTTCGAGGGTAATTTTGGAACTTTTAAAATTTCAAGATTATTTTTTATACAAACTACAAAATTTGAAGGTATTTTATATAATTTAACATTTTAAAAATAAAGATCATAGTTAAAAATAGTAACGTTTATATGCTTAATCTTAAAAATCAAATGAGCTGCAATTTTCTAACTTCCAAATTTTCTATTATAATCCCTCACGCGAATTTGTTTTAGTACATACTATTATTTTTCCATCTTATTTAATTAACACTTGTACAACATAAATATGTGTTAATATTTAATAATAATACGTAATGAGAAAAAAGATGTGCAAAGATACATTAGGCGTCAAATAATTAGTTCAGTTAAAACAAAATAATTAGCAATGACATACAAACTTTTTCTTTTTTTTTTTTTTTTGGTTTTTAATGTAAATTTTCAGGACTAAAATAAAATGTAAGAGTTTAAAATAATCAAAATGAAATAAAATTCAAACCAATATTAAACTCGAAAATTTAAACCAATATTAAACTCGAAAAAAAAAGTAAAGAAATCGAGAAACCTCATGATTTTAATAAGATGCATGAGTTACTCATCTAACAATAATATCGTAGGAGCAAATTGAAGCAAACTGAGATGGAATGCGAGTATTTGAAGAGATGGTTTGGATCATTAACAGAGCAAAACCATCGGTTGCAGCGGGAACTGGAGGCGCTGAGAGCTATCAAGGTTGCTCCATCGGCCATCGTCTCATGCCACGACCGACAGCCGCCCCTCTCGACGTCTACTATAACCATGTGTCCCCGGTGTGAGCGTATAACATCTAGTAAGGCCGCAATCGCCGCCGCAACAAAGCCATCAAAGGTGGTTACATCCACCCTGAAATTGCATCAGCCGTCGCGAGCTTGTTGA

mRNA sequence

ATGGCTGTTTTTCCTATCAACTCATCCAACTTGGATCTCTCCATTTCCATGCCGGGCTTTGCTTCTTCATCGACTCGTCCTCCGCTAATGAGAGAATTGGACATGAACCGAGTACCGACGAGAGGAGAAGCAGAAGAAGAATGGGCGGTGGCACCGAGCGCGGAGGAAGAGGAAGAAGAAAGTTGCATTAATAATGGAGGTACTAAGCCAAGGAAGAAGCTTCGCCTGTCAAAAGATCAGTCTCGTCTTCTTGAAGAAAGCTTTAGGCTCAATCATACATTAAACCCTAAGCAAAAGGAAGCATTGGCCATGGAGTTGAAGCTGAAGCCAAGACAAGTTGAAGTTTGGTTTCAGAATCGTAGGGCCAGGAGCAAATTGAAGCAAACTGAGATGGAATGCGAGTATTTGAAGAGATGGTTTGGATCATTAACAGAGCAAAACCATCGGTTGCAGCGGGAACTGGAGGCGCTGAGAGCTATCAAGGTTGCTCCATCGGCCATCGTCTCATGCCACGACCGACAGCCGCCCCTCTCGACGTCTACTATAACCATGTGTCCCCGGTGTGAGCGTATAACATCTAGTAAGGCCGCAATCGCCGCCGCAACAAAGCCATCAAAGGTGGTTACATCCACCCTGAAATTGCATCAGCCGTCGCGAGCTTGTTGA

Coding sequence (CDS)

ATGGCTGTTTTTCCTATCAACTCATCCAACTTGGATCTCTCCATTTCCATGCCGGGCTTTGCTTCTTCATCGACTCGTCCTCCGCTAATGAGAGAATTGGACATGAACCGAGTACCGACGAGAGGAGAAGCAGAAGAAGAATGGGCGGTGGCACCGAGCGCGGAGGAAGAGGAAGAAGAAAGTTGCATTAATAATGGAGGTACTAAGCCAAGGAAGAAGCTTCGCCTGTCAAAAGATCAGTCTCGTCTTCTTGAAGAAAGCTTTAGGCTCAATCATACATTAAACCCTAAGCAAAAGGAAGCATTGGCCATGGAGTTGAAGCTGAAGCCAAGACAAGTTGAAGTTTGGTTTCAGAATCGTAGGGCCAGGAGCAAATTGAAGCAAACTGAGATGGAATGCGAGTATTTGAAGAGATGGTTTGGATCATTAACAGAGCAAAACCATCGGTTGCAGCGGGAACTGGAGGCGCTGAGAGCTATCAAGGTTGCTCCATCGGCCATCGTCTCATGCCACGACCGACAGCCGCCCCTCTCGACGTCTACTATAACCATGTGTCCCCGGTGTGAGCGTATAACATCTAGTAAGGCCGCAATCGCCGCCGCAACAAAGCCATCAAAGGTGGTTACATCCACCCTGAAATTGCATCAGCCGTCGCGAGCTTGTTGA

Protein sequence

MAVFPINSSNLDLSISMPGFASSSTRPPLMRELDMNRVPTRGEAEEEWAVAPSAEEEEEESCINNGGTKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNHRLQRELEALRAIKVAPSAIVSCHDRQPPLSTSTITMCPRCERITSSKAAIAAATKPSKVVTSTLKLHQPSRAC
Homology
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BLAST of ClCG01G006050 vs. Swiss-Prot
Match: HOX3_ORYSJ (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=1 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.2e-58
Identity = 127/222 (57.21%), Postives = 154/222 (69.37%), Query Frame = 1 

Query: 9   SNLDLSISMPGFASSSTRPP-----------LMRELDMNRVPTRGEAEEEWAVAPSAEEE 68
           S L+L++++PG +SS +               MR+LD+N+ P  G  EEE+ +  S EE+
Sbjct: 8   SGLELTMAVPGLSSSGSEGAGCNNNNAGGGCNMRDLDINQ-PASGGEEEEFPMG-SVEED 67

Query: 69  EEESCINNGGTKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWF 128
           EEE  +  GG    KKLRLSK+QSRLLEESFRLNHTL PKQKEALA++LKL+PRQVEVWF
Sbjct: 68  EEERGV--GGPHRPKKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWF 127

Query: 129 QNRRARSKLKQTEMECEYLKRWFGSLTEQNHRLQRELEALRAIKVAPSAIVSCHDRQPPL 188
           QNRRAR+KLKQTEMECEYLKR FGSLTE+N RLQRE+E LRA++VAP  ++S H RQ PL
Sbjct: 128 QNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRAMRVAPPTVLSPHTRQ-PL 187

Query: 189 STSTITMCPRCERITSSKAAIAAATKPSKVVTSTLKLHQPSR 220
             S +TMCPRCERIT++    A    PS    +      P R
Sbjct: 188 PASALTMCPRCERITAATGPPAVRPPPSSAAAAAPSPFHPRR 224

[Close]
BLAST of ClCG01G006050 vs. Swiss-Prot
Match: HOX3_ORYSI (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica GN=HOX3 PE=1 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.2e-58
Identity = 127/222 (57.21%), Postives = 154/222 (69.37%), Query Frame = 1 

Query: 9   SNLDLSISMPGFASSSTRPP-----------LMRELDMNRVPTRGEAEEEWAVAPSAEEE 68
           S L+L++++PG +SS +               MR+LD+N+ P  G  EEE+ +  S EE+
Sbjct: 8   SGLELTMAVPGLSSSGSEGAGCNNNNAGGGCNMRDLDINQ-PASGGEEEEFPMG-SVEED 67

Query: 69  EEESCINNGGTKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWF 128
           EEE  +  GG    KKLRLSK+QSRLLEESFRLNHTL PKQKEALA++LKL+PRQVEVWF
Sbjct: 68  EEERGV--GGPHRPKKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWF 127

Query: 129 QNRRARSKLKQTEMECEYLKRWFGSLTEQNHRLQRELEALRAIKVAPSAIVSCHDRQPPL 188
           QNRRAR+KLKQTEMECEYLKR FGSLTE+N RLQRE+E LRA++VAP  ++S H RQ PL
Sbjct: 128 QNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRAMRVAPPTVLSPHTRQ-PL 187

Query: 189 STSTITMCPRCERITSSKAAIAAATKPSKVVTSTLKLHQPSR 220
             S +TMCPRCERIT++    A    PS    +      P R
Sbjct: 188 PASALTMCPRCERITAATGPPAVRPPPSSAAAAAPSPFHPRR 224

[Close]
BLAST of ClCG01G006050 vs. Swiss-Prot
Match: ATB17_ARATH (Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana GN=ATHB-17 PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 4.2e-57
Identity = 123/218 (56.42%), Postives = 147/218 (67.43%), Query Frame = 1 

Query: 1   MAVFPINSSNLDLSISMPGFASSSTRPPLMRE----------LDMNRVPTRGEAEEEWAV 60
           MA+ P NSSNLDL+IS+PGF+SS    PL  E          LDMNR+P+          
Sbjct: 74  MAILPENSSNLDLTISVPGFSSS----PLSDEGSGGGRDQLRLDMNRLPS---------- 133

Query: 61  APSAEEEEEESCINNGGTKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKP 120
             S + ++EE   ++G   PRKKLRL+++QSRLLE+SFR NHTLNPKQKE LA  L L+P
Sbjct: 134 --SEDGDDEEFSHDDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRP 193

Query: 121 RQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNHRLQRELEALRAIKVAPSAIVSC 180
           RQ+EVWFQNRRARSKLKQTEMECEYLKRWFGSLTE+NHRL RE+E LRA+KV P+ +   
Sbjct: 194 RQIEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEENHRLHREVEELRAMKVGPTTV--- 253

Query: 181 HDRQPPLSTSTITMCPRCERITSSKAAIAAATKPSKVV 209
                  S S++TMCPRCER+T        A  PS+ V
Sbjct: 254 ------NSASSLTMCPRCERVT-------PAASPSRAV 259

[Close]
BLAST of ClCG01G006050 vs. Swiss-Prot
Match: ATHBX_ARATH (Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana GN=ATHB-X PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.8e-50
Identity = 116/219 (52.97%), Postives = 143/219 (65.30%), Query Frame = 1 

Query: 1   MAVFPINSSNLDLSISMPGFASSSTRPPL-----MRELDMNRVPTRGEAEEEWAVAPSAE 60
           MA+ P NSS+LDL+IS+P F+ S   P L     MR+ D+N+ P + E + EW +  +  
Sbjct: 1   MALSP-NSSSLDLTISIPSFSPS---PSLGDHHGMRDFDINQTP-KTEEDREWMIGATPH 60

Query: 61  EEEEESCINNGGTKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEV 120
             E++S   N G + RKKLRL+K+QS LLEESF  NHTL PKQK+ LA  LKL  RQVEV
Sbjct: 61  VNEDDS---NSGGRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEV 120

Query: 121 WFQNRRARSKLKQTEMECEYLKRWFGSLTEQNHRLQRELEALRAIKVAPSAIVSCHDRQP 180
           WFQNRRARSKLK TEMECEYLKRWFGSL EQN RLQ E+E LRA+K              
Sbjct: 121 WFQNRRARSKLKHTEMECEYLKRWFGSLKEQNRRLQIEVEELRALK-------------- 180

Query: 181 PLSTSTITMCPRCERITSSKAAIAAATKPSKVVTSTLKL 215
           P STS +TMCPRCER+T +    + A +   V++S  ++
Sbjct: 181 PSSTSALTMCPRCERVTDAVDNDSNAVQEGAVLSSRSRM 197

[Close]
BLAST of ClCG01G006050 vs. Swiss-Prot
Match: ATHB4_ARATH (Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana GN=ATHB-4 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.7e-39
Identity = 93/182 (51.10%), Postives = 119/182 (65.38%), Query Frame = 1 

Query: 45  EEEWAVAPSAEEEEEE--SCINNGGTK------------PRKKLRLSKDQSRLLEESFRL 104
           + + AVA   +E E E  SC   GG+              RKKLRLSKDQ+ +LEE+F+ 
Sbjct: 122 KRDLAVARGGDENEAERASCSRGGGSGGSDDEDGGNGDGSRKKLRLSKDQALVLEETFKE 181

Query: 105 NHTLNPKQKEALAMELKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNHRL 164
           + TLNPKQK ALA +L L+ RQVEVWFQNRRAR+KLKQTE++CEYLKR   +LTE+N RL
Sbjct: 182 HSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRL 241

Query: 165 QRELEALRAIKVAPSAIVSCHDRQPPLSTSTITMCPRCERITSSKAAIAAATKPSKVVTS 213
           Q+E+  LRA+K++P   +      PP   +T+TMCP CER++SS A + AA  PS   T 
Sbjct: 242 QKEVSELRALKLSPHLYM---HMTPP---TTLTMCPSCERVSSSAATVTAA--PSTTTTP 295

[Close]
BLAST of ClCG01G006050 vs. TrEMBL
Match: A0A0A0KPM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G576600 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.6e-76
Identity = 155/201 (77.11%), Postives = 167/201 (83.08%), Query Frame = 1 

Query: 29  LMRELDMNRVPTRGEAEEEWAVAPSAEEEEEESCINN-GGTKPRKKLRLSKDQSRLLEES 88
           ++RELDMNRVP  GEAEE+WA  PS EE EEES INN GGT+PRKKLRLSKDQSRLLEES
Sbjct: 11  VVRELDMNRVPAEGEAEEDWARGPSVEEGEEESSINNNGGTQPRKKLRLSKDQSRLLEES 70

Query: 89  FRLNHTLNPKQKEALAMELKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQN 148
           FRLNHTLNPKQKE LAMELKLKPRQVEVWFQNRRARSKLKQTE+ECEY+KR FGSLTEQN
Sbjct: 71  FRLNHTLNPKQKEGLAMELKLKPRQVEVWFQNRRARSKLKQTELECEYMKRCFGSLTEQN 130

Query: 149 HRLQRELEALRAIKVAPSAIVSCHDRQPP-LSTSTITMCPRCERITSSKAAIA------A 208
            RLQ ELE LRAIKVAP A+VS H+R PP L  STIT+CPRCERI SSK  +A      A
Sbjct: 131 RRLQWELEELRAIKVAPPAVVSRHNRHPPLLMRSTITICPRCERIISSKNTVADQTATTA 190

Query: 209 ATKPSKVVTSTLKLHQPSRAC 222
              PSKVV S L+L QPS+AC
Sbjct: 191 TAMPSKVVLSALQLRQPSQAC 211

[Close]
BLAST of ClCG01G006050 vs. TrEMBL
Match: A0A061EF99_THECC (Homeobox-leucine zipper protein HOX3 OS=Theobroma cacao GN=TCM_010868 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 4.3e-69
Identity = 148/238 (62.18%), Postives = 175/238 (73.53%), Query Frame = 1 

Query: 1   MAVFPINSSNLDLSISMPGFASSSTRPP-------LMRELDMNRVPTRGEAEEEWAVAPS 60
           MAV P  SSNL+L+IS+PGF+SS + P         +R+LD+N+VP+ G AE+EW  A  
Sbjct: 1   MAVLPTGSSNLELTISVPGFSSSPSLPSSGDQGGCTVRDLDINQVPSGG-AEDEWITA-- 60

Query: 61  AEEEEEESCINNGGTKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQV 120
           + E+EEESC    G  PRKKLRL+K+QSRLLEESFR NHTLNPKQKEALAM+LKL+PRQV
Sbjct: 61  SMEDEEESC---NGAPPRKKLRLTKEQSRLLEESFRQNHTLNPKQKEALAMQLKLRPRQV 120

Query: 121 EVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNHRLQRELEALRAIKVAPSAIVSCHDR 180
           EVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQN RLQRE+E LRA+KV P  ++S H  
Sbjct: 121 EVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSC 180

Query: 181 QPPLSTSTITMCPRCERITS----------SKAAIAAATKPSKVVTSTLKLHQPSRAC 222
           + PL  ST+TMCPRCER+T+          + A   A T  SKV TS L+    S AC
Sbjct: 181 E-PLPASTLTMCPRCERVTTTALDKGPTKMTAATATATTLSSKVGTSALQSRPSSAAC 231

[Close]
BLAST of ClCG01G006050 vs. TrEMBL
Match: A0A0D2MCI0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G178800 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 9.6e-69
Identity = 150/242 (61.98%), Postives = 178/242 (73.55%), Query Frame = 1 

Query: 1   MAVFPINSSNLDLSISMPGFASSSTRPP-------LMRELDMNRVPTRGEAEEEWAVAPS 60
           MAV P  SS+L+L+IS+PGFASS + P         +R+LD+N+VP    AE+EW  A  
Sbjct: 24  MAVLPTGSSHLELTISVPGFASSPSFPSSGDQGGCTVRDLDINQVP----AEDEWITA-- 83

Query: 61  AEEEEEESCINNGGTKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQV 120
           + E+EEESC  N G  PRKKLRL+K+QSRLLEESFRLNHTLNPKQK ALA++LKL+PRQV
Sbjct: 84  SMEDEEESC--NNGAPPRKKLRLTKEQSRLLEESFRLNHTLNPKQKGALALQLKLRPRQV 143

Query: 121 EVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNHRLQRELEALRAIKVAPSAIVSCHDR 180
           EVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQN RLQRE+E LRA+KVAP  ++S H  
Sbjct: 144 EVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVAPPTVISPHSC 203

Query: 181 QPPLSTSTITMCPRCERITSS--------KAAIAAATKP------SKVVTSTLKLHQPSR 222
           + PL  ST+TMCPRCER+T++         A + AAT P      SKV TS L+    S 
Sbjct: 204 E-PLPASTLTMCPRCERVTTTTTAAIEKGSAKMTAATNPTATTLSSKVGTSALQSRPSSA 256

[Close]
BLAST of ClCG01G006050 vs. TrEMBL
Match: A0A0B0MRC6_GOSAR (Homeobox-leucine zipper HOX3 OS=Gossypium arboreum GN=F383_25892 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 4.8e-68
Identity = 145/226 (64.16%), Postives = 174/226 (76.99%), Query Frame = 1 

Query: 1   MAVFPINSSNLDLSISMPGFASSSTRPP-------LMRELDMNRVPTRGEAEEEWAVAPS 60
           MAV P  SS+L+L+IS+PGFASS + P         +R+LD+N+VP    AE+EW  A  
Sbjct: 1   MAVLPTGSSHLELTISVPGFASSPSFPSSGDQGGCTVRDLDINQVP----AEDEWITA-- 60

Query: 61  AEEEEEESCINNGGTKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQV 120
           + E+EEESC  N G  PRKKLRL+K+QSRLLEESFRLNHTLNPKQKEALA++LKL+PRQV
Sbjct: 61  SMEDEEESC--NNGAPPRKKLRLTKEQSRLLEESFRLNHTLNPKQKEALALQLKLRPRQV 120

Query: 121 EVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNHRLQRELEALRAIKVAPSAIVSCHDR 180
           EVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQN RLQRE+E LRA+KVAP  ++S H  
Sbjct: 121 EVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVAPPTVISPHSC 180

Query: 181 QPPLSTSTITMCPRCERITSSKAAIAAATKPSKVVTSTLKLHQPSR 220
           + PL  ST+TMCPRCER+T++    AA  K S  +T+  + H P R
Sbjct: 181 E-PLPASTLTMCPRCERVTTT--TTAAIEKGSAKMTADCR-HHPQR 214

[Close]
BLAST of ClCG01G006050 vs. TrEMBL
Match: B9SJ50_RICCO (Homeobox protein, putative OS=Ricinus communis GN=RCOM_0843040 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 6.2e-68
Identity = 150/243 (61.73%), Postives = 177/243 (72.84%), Query Frame = 1 

Query: 1   MAVFPINSSNLDLSISMPGFASSSTRPPL---MRELDMNRVPTRGEAEEEWAVAPSAEEE 60
           MA+ P +SS+L+L+ISMPGFASS + P     +++LD+N++P  G AEEEW  A    E+
Sbjct: 1   MAISPSSSSSLELTISMPGFASSPSVPSYGEGVKDLDINQLPA-GVAEEEWITA--GIED 60

Query: 61  EEESCINNGGTKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWF 120
           EEES IN G   PRKKLRLSK+QSRLLEESFR +HTLNP+QKEALAM+LKL+PRQVEVWF
Sbjct: 61  EEESNINGG--PPRKKLRLSKEQSRLLEESFRQHHTLNPRQKEALAMQLKLRPRQVEVWF 120

Query: 121 QNRRARSKLKQTEMECEYLKRWFGSLTEQNHRLQRELEALRAIKVAPSAIVSCHDRQPPL 180
           QNRRARSKLKQTEMECEYLKRWFGSLTEQN RLQRE+E LRA+KV P  ++S H  + PL
Sbjct: 121 QNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVLSPHSCE-PL 180

Query: 181 STSTITMCPRCERITSSKAAIAA-------------------ATKPSKVVTSTLKLHQPS 222
             ST+TMCPRCER+T+S    AA                   AT  SKV T TL+  Q S
Sbjct: 181 PASTLTMCPRCERVTTSTNTAAAFDKGPTRTATPATTPTTAVATLSSKVGTPTLQSRQSS 237

[Close]
BLAST of ClCG01G006050 vs. TAIR10
Match: AT2G01430.1 (AT2G01430.1 homeobox-leucine zipper protein 17)

HSP 1 Score: 222.6 bits (566), Expect = 2.4e-58
Identity = 123/218 (56.42%), Postives = 147/218 (67.43%), Query Frame = 1 

Query: 1   MAVFPINSSNLDLSISMPGFASSSTRPPLMRE----------LDMNRVPTRGEAEEEWAV 60
           MA+ P NSSNLDL+IS+PGF+SS    PL  E          LDMNR+P+          
Sbjct: 74  MAILPENSSNLDLTISVPGFSSS----PLSDEGSGGGRDQLRLDMNRLPS---------- 133

Query: 61  APSAEEEEEESCINNGGTKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKP 120
             S + ++EE   ++G   PRKKLRL+++QSRLLE+SFR NHTLNPKQKE LA  L L+P
Sbjct: 134 --SEDGDDEEFSHDDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRP 193

Query: 121 RQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNHRLQRELEALRAIKVAPSAIVSC 180
           RQ+EVWFQNRRARSKLKQTEMECEYLKRWFGSLTE+NHRL RE+E LRA+KV P+ +   
Sbjct: 194 RQIEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEENHRLHREVEELRAMKVGPTTV--- 253

Query: 181 HDRQPPLSTSTITMCPRCERITSSKAAIAAATKPSKVV 209
                  S S++TMCPRCER+T        A  PS+ V
Sbjct: 254 ------NSASSLTMCPRCERVT-------PAASPSRAV 259

[Close]
BLAST of ClCG01G006050 vs. TAIR10
Match: AT1G70920.1 (AT1G70920.1 homeobox-leucine zipper protein 18)

HSP 1 Score: 199.5 bits (506), Expect = 2.1e-51
Identity = 116/219 (52.97%), Postives = 143/219 (65.30%), Query Frame = 1 

Query: 1   MAVFPINSSNLDLSISMPGFASSSTRPPL-----MRELDMNRVPTRGEAEEEWAVAPSAE 60
           MA+ P NSS+LDL+IS+P F+ S   P L     MR+ D+N+ P + E + EW +  +  
Sbjct: 1   MALSP-NSSSLDLTISIPSFSPS---PSLGDHHGMRDFDINQTP-KTEEDREWMIGATPH 60

Query: 61  EEEEESCINNGGTKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEV 120
             E++S   N G + RKKLRL+K+QS LLEESF  NHTL PKQK+ LA  LKL  RQVEV
Sbjct: 61  VNEDDS---NSGGRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEV 120

Query: 121 WFQNRRARSKLKQTEMECEYLKRWFGSLTEQNHRLQRELEALRAIKVAPSAIVSCHDRQP 180
           WFQNRRARSKLK TEMECEYLKRWFGSL EQN RLQ E+E LRA+K              
Sbjct: 121 WFQNRRARSKLKHTEMECEYLKRWFGSLKEQNRRLQIEVEELRALK-------------- 180

Query: 181 PLSTSTITMCPRCERITSSKAAIAAATKPSKVVTSTLKL 215
           P STS +TMCPRCER+T +    + A +   V++S  ++
Sbjct: 181 PSSTSALTMCPRCERVTDAVDNDSNAVQEGAVLSSRSRM 197

[Close]
BLAST of ClCG01G006050 vs. TAIR10
Match: AT2G44910.1 (AT2G44910.1 homeobox-leucine zipper protein 4)

HSP 1 Score: 161.8 bits (408), Expect = 4.9e-40
Identity = 93/182 (51.10%), Postives = 119/182 (65.38%), Query Frame = 1 

Query: 45  EEEWAVAPSAEEEEEE--SCINNGGTK------------PRKKLRLSKDQSRLLEESFRL 104
           + + AVA   +E E E  SC   GG+              RKKLRLSKDQ+ +LEE+F+ 
Sbjct: 122 KRDLAVARGGDENEAERASCSRGGGSGGSDDEDGGNGDGSRKKLRLSKDQALVLEETFKE 181

Query: 105 NHTLNPKQKEALAMELKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNHRL 164
           + TLNPKQK ALA +L L+ RQVEVWFQNRRAR+KLKQTE++CEYLKR   +LTE+N RL
Sbjct: 182 HSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRL 241

Query: 165 QRELEALRAIKVAPSAIVSCHDRQPPLSTSTITMCPRCERITSSKAAIAAATKPSKVVTS 213
           Q+E+  LRA+K++P   +      PP   +T+TMCP CER++SS A + AA  PS   T 
Sbjct: 242 QKEVSELRALKLSPHLYM---HMTPP---TTLTMCPSCERVSSSAATVTAA--PSTTTTP 295

[Close]
BLAST of ClCG01G006050 vs. TAIR10
Match: AT5G06710.1 (AT5G06710.1 homeobox from Arabidopsis thaliana)

HSP 1 Score: 154.8 bits (390), Expect = 6.0e-38
Identity = 92/190 (48.42%), Postives = 118/190 (62.11%), Query Frame = 1 

Query: 7   NSSNLDLSISMPGFASSSTRPPLMRELDMNRVPTRGEAEEEWAVAPSAEEEEEESCINNG 66
           +S  LD  I   G+   S +    R++D        +  E  A   S E+ ++E    NG
Sbjct: 143 SSFQLDFGIKSYGYERRSNK----RDID--------DEVERSASRASNEDNDDE----NG 202

Query: 67  GTKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWFQNRRARSKL 126
            T  RKKLRLSKDQS  LE+SF+ + TLNPKQK ALA +L L+PRQVEVWFQNRRAR+KL
Sbjct: 203 ST--RKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKL 262

Query: 127 KQTEMECEYLKRWFGSLTEQNHRLQRELEALRAIKVAPSAIVSCHDRQPPLSTSTITMCP 186
           KQTE++CEYLKR   SLTE+N RLQ+E++ LR +K +    +        L  +T+TMCP
Sbjct: 263 KQTEVDCEYLKRCCESLTEENRRLQKEVKELRTLKTSTPFYMQ-------LPATTLTMCP 307

Query: 187 RCERITSSKA 197
            CER+ +S A
Sbjct: 323 SCERVATSAA 307

[Close]
BLAST of ClCG01G006050 vs. TAIR10
Match: AT3G60390.1 (AT3G60390.1 homeobox-leucine zipper protein 3)

HSP 1 Score: 152.1 bits (383), Expect = 3.9e-37
Identity = 79/144 (54.86%), Postives = 106/144 (73.61%), Query Frame = 1 

Query: 58  EEESCINNGGTKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWF 117
           ++E    NG    RKKLRLSK+Q+ +LEE+F+ + TLNPKQK ALA +L L+ RQVEVWF
Sbjct: 148 DDEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWF 207

Query: 118 QNRRARSKLKQTEMECEYLKRWFGSLTEQNHRLQRELEALRAIKVAPSAIVSCHDRQPPL 177
           QNRRAR+KLKQTE++CEYLKR   +LT++N RLQ+E+  LRA+K++P   +     +PP 
Sbjct: 208 QNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALKLSPHLYM---HMKPP- 267

Query: 178 STSTITMCPRCER--ITSSKAAIA 200
             +T+TMCP CER  +TSS +++A
Sbjct: 268 --TTLTMCPSCERVAVTSSSSSVA 285

[Close]
BLAST of ClCG01G006050 vs. NCBI nr
Match: gi|778704059|ref|XP_011655468.1| (PREDICTED: homeobox-leucine zipper protein HOX3-like [Cucumis sativus])

HSP 1 Score: 329.7 bits (844), Expect = 3.9e-87
Identity = 179/232 (77.16%), Postives = 192/232 (82.76%), Query Frame = 1 

Query: 1   MAVF-PINSSNLDLSISMPGFASS--STRPPLMRELDMNRVPTRGEAEEEWAVAPSAEEE 60
           MA F PINSSNLDLSISMPGF+SS  +TRP  +RELDMNRVP  GEAEE+WA  PS EE 
Sbjct: 1   MAFFDPINSSNLDLSISMPGFSSSPLTTRPLFVRELDMNRVPAEGEAEEDWARGPSVEEG 60

Query: 61  EEESCINN-GGTKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVW 120
           EEES INN GGT+PRKKLRLSKDQSRLLEESFRLNHTLNPKQKE LAMELKLKPRQVEVW
Sbjct: 61  EEESSINNNGGTQPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEGLAMELKLKPRQVEVW 120

Query: 121 FQNRRARSKLKQTEMECEYLKRWFGSLTEQNHRLQRELEALRAIKVAPSAIVSCHDRQPP 180
           FQNRRARSKLKQTE+ECEY+KR FGSLTEQN RLQ ELE LRAIKVAP A+VS H+R PP
Sbjct: 121 FQNRRARSKLKQTELECEYMKRCFGSLTEQNRRLQWELEELRAIKVAPPAVVSRHNRHPP 180

Query: 181 -LSTSTITMCPRCERITSSKAAIA------AATKPSKVVTSTLKLHQPSRAC 222
            L  STIT+CPRCERI SSK  +A      A   PSKVV S L+L QPS+AC
Sbjct: 181 LLMRSTITICPRCERIISSKNTVADQTATTATAMPSKVVLSALQLRQPSQAC 232

[Close]
BLAST of ClCG01G006050 vs. NCBI nr
Match: gi|659072906|ref|XP_008467159.1| (PREDICTED: homeobox-leucine zipper protein HOX3-like [Cucumis melo])

HSP 1 Score: 326.2 bits (835), Expect = 4.3e-86
Identity = 178/229 (77.73%), Postives = 191/229 (83.41%), Query Frame = 1 

Query: 5   PINSSNLDLSISMPGFASS--STRPPLMRELDMNRVPTRGEAEEEWAVAPSAEEE-EEES 64
           PINSSNLDLSISMPGF+SS  +TRP L+RELDMNRVP  GEAE +WA   S EEE EEES
Sbjct: 6   PINSSNLDLSISMPGFSSSLPTTRPLLVRELDMNRVPAEGEAEADWARGQSVEEEGEEES 65

Query: 65  CINN--GGTKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWFQN 124
            INN  GGT+PRKKLRLSKDQSRLLEESFRLNHTLNPKQKE LAMELKLKPRQVEVWFQN
Sbjct: 66  SINNNNGGTQPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEGLAMELKLKPRQVEVWFQN 125

Query: 125 RRARSKLKQTEMECEYLKRWFGSLTEQNHRLQRELEALRAIKVAPSAIVSCHDR-QPPLS 184
           RRARSKLKQTE+ECEY+KR FGSLTEQN RLQ ELE LRAIKVAP A+VS H+R QPPLS
Sbjct: 126 RRARSKLKQTELECEYMKRCFGSLTEQNRRLQWELEELRAIKVAPPAVVSRHNRSQPPLS 185

Query: 185 TSTITMCPRCERITSSKAAIA------AATKPSKVVTSTLKLHQPSRAC 222
            STIT+CPRCERITS+K  +A      A    S+VV S LKL QPSRAC
Sbjct: 186 RSTITICPRCERITSNKNTVAENATTTATAMQSEVVLSALKLRQPSRAC 234

[Close]
BLAST of ClCG01G006050 vs. NCBI nr
Match: gi|700196341|gb|KGN51518.1| (hypothetical protein Csa_5G576600 [Cucumis sativus])

HSP 1 Score: 293.9 bits (751), Expect = 2.4e-76
Identity = 155/201 (77.11%), Postives = 167/201 (83.08%), Query Frame = 1 

Query: 29  LMRELDMNRVPTRGEAEEEWAVAPSAEEEEEESCINN-GGTKPRKKLRLSKDQSRLLEES 88
           ++RELDMNRVP  GEAEE+WA  PS EE EEES INN GGT+PRKKLRLSKDQSRLLEES
Sbjct: 11  VVRELDMNRVPAEGEAEEDWARGPSVEEGEEESSINNNGGTQPRKKLRLSKDQSRLLEES 70

Query: 89  FRLNHTLNPKQKEALAMELKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQN 148
           FRLNHTLNPKQKE LAMELKLKPRQVEVWFQNRRARSKLKQTE+ECEY+KR FGSLTEQN
Sbjct: 71  FRLNHTLNPKQKEGLAMELKLKPRQVEVWFQNRRARSKLKQTELECEYMKRCFGSLTEQN 130

Query: 149 HRLQRELEALRAIKVAPSAIVSCHDRQPP-LSTSTITMCPRCERITSSKAAIA------A 208
            RLQ ELE LRAIKVAP A+VS H+R PP L  STIT+CPRCERI SSK  +A      A
Sbjct: 131 RRLQWELEELRAIKVAPPAVVSRHNRHPPLLMRSTITICPRCERIISSKNTVADQTATTA 190

Query: 209 ATKPSKVVTSTLKLHQPSRAC 222
              PSKVV S L+L QPS+AC
Sbjct: 191 TAMPSKVVLSALQLRQPSQAC 211

[Close]
BLAST of ClCG01G006050 vs. NCBI nr
Match: gi|590696318|ref|XP_007045132.1| (Homeobox-leucine zipper protein HOX3 [Theobroma cacao])

HSP 1 Score: 269.2 bits (687), Expect = 6.2e-69
Identity = 148/238 (62.18%), Postives = 175/238 (73.53%), Query Frame = 1 

Query: 1   MAVFPINSSNLDLSISMPGFASSSTRPP-------LMRELDMNRVPTRGEAEEEWAVAPS 60
           MAV P  SSNL+L+IS+PGF+SS + P         +R+LD+N+VP+ G AE+EW  A  
Sbjct: 1   MAVLPTGSSNLELTISVPGFSSSPSLPSSGDQGGCTVRDLDINQVPSGG-AEDEWITA-- 60

Query: 61  AEEEEEESCINNGGTKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQV 120
           + E+EEESC    G  PRKKLRL+K+QSRLLEESFR NHTLNPKQKEALAM+LKL+PRQV
Sbjct: 61  SMEDEEESC---NGAPPRKKLRLTKEQSRLLEESFRQNHTLNPKQKEALAMQLKLRPRQV 120

Query: 121 EVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNHRLQRELEALRAIKVAPSAIVSCHDR 180
           EVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQN RLQRE+E LRA+KV P  ++S H  
Sbjct: 121 EVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSC 180

Query: 181 QPPLSTSTITMCPRCERITS----------SKAAIAAATKPSKVVTSTLKLHQPSRAC 222
           + PL  ST+TMCPRCER+T+          + A   A T  SKV TS L+    S AC
Sbjct: 181 E-PLPASTLTMCPRCERVTTTALDKGPTKMTAATATATTLSSKVGTSALQSRPSSAAC 231

[Close]
BLAST of ClCG01G006050 vs. NCBI nr
Match: gi|823135022|ref|XP_012467291.1| (PREDICTED: homeobox-leucine zipper protein HOX3 [Gossypium raimondii])

HSP 1 Score: 268.1 bits (684), Expect = 1.4e-68
Identity = 150/242 (61.98%), Postives = 178/242 (73.55%), Query Frame = 1 

Query: 1   MAVFPINSSNLDLSISMPGFASSSTRPP-------LMRELDMNRVPTRGEAEEEWAVAPS 60
           MAV P  SS+L+L+IS+PGFASS + P         +R+LD+N+VP    AE+EW  A  
Sbjct: 24  MAVLPTGSSHLELTISVPGFASSPSFPSSGDQGGCTVRDLDINQVP----AEDEWITA-- 83

Query: 61  AEEEEEESCINNGGTKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQV 120
           + E+EEESC  N G  PRKKLRL+K+QSRLLEESFRLNHTLNPKQK ALA++LKL+PRQV
Sbjct: 84  SMEDEEESC--NNGAPPRKKLRLTKEQSRLLEESFRLNHTLNPKQKGALALQLKLRPRQV 143

Query: 121 EVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNHRLQRELEALRAIKVAPSAIVSCHDR 180
           EVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQN RLQRE+E LRA+KVAP  ++S H  
Sbjct: 144 EVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVAPPTVISPHSC 203

Query: 181 QPPLSTSTITMCPRCERITSS--------KAAIAAATKP------SKVVTSTLKLHQPSR 222
           + PL  ST+TMCPRCER+T++         A + AAT P      SKV TS L+    S 
Sbjct: 204 E-PLPASTLTMCPRCERVTTTTTAAIEKGSAKMTAATNPTATTLSSKVGTSALQSRPSSA 256

The following BLAST results are available for this feature:
BLAST of ClCG01G006050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HOX3_ORYSJ2.2e-5857.21Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=... [more]
HOX3_ORYSI2.2e-5857.21Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica GN=HOX3 PE=1 ... [more]
ATB17_ARATH4.2e-5756.42Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana GN=ATHB-17 PE=2 ... [more]
ATHBX_ARATH3.8e-5052.97Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana GN=ATHB-X PE=2 SV... [more]
ATHB4_ARATH8.7e-3951.10Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana GN=ATHB-4 PE=2 SV... [more]
BLAST of ClCG01G006050 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPM6_CUCSA1.6e-7677.11Uncharacterized protein OS=Cucumis sativus GN=Csa_5G576600 PE=4 SV=1[more]
A0A061EF99_THECC4.3e-6962.18Homeobox-leucine zipper protein HOX3 OS=Theobroma cacao GN=TCM_010868 PE=4 SV=1[more]
A0A0D2MCI0_GOSRA9.6e-6961.98Uncharacterized protein OS=Gossypium raimondii GN=B456_002G178800 PE=4 SV=1[more]
A0A0B0MRC6_GOSAR4.8e-6864.16Homeobox-leucine zipper HOX3 OS=Gossypium arboreum GN=F383_25892 PE=4 SV=1[more]
B9SJ50_RICCO6.2e-6861.73Homeobox protein, putative OS=Ricinus communis GN=RCOM_0843040 PE=4 SV=1[more]
BLAST of ClCG01G006050 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G01430.12.4e-5856.42 homeobox-leucine zipper protein 17[more]
AT1G70920.12.1e-5152.97 homeobox-leucine zipper protein 18[more]
AT2G44910.14.9e-4051.10 homeobox-leucine zipper protein 4[more]
AT5G06710.16.0e-3848.42 homeobox from Arabidopsis thaliana[more]
AT3G60390.13.9e-3754.86 homeobox-leucine zipper protein 3[more]
BLAST of ClCG01G006050 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778704059|ref|XP_011655468.1|3.9e-8777.16PREDICTED: homeobox-leucine zipper protein HOX3-like [Cucumis sativus][more]
gi|659072906|ref|XP_008467159.1|4.3e-8677.73PREDICTED: homeobox-leucine zipper protein HOX3-like [Cucumis melo][more]
gi|700196341|gb|KGN51518.1|2.4e-7677.11hypothetical protein Csa_5G576600 [Cucumis sativus][more]
gi|590696318|ref|XP_007045132.1|6.2e-6962.18Homeobox-leucine zipper protein HOX3 [Theobroma cacao][more]
gi|823135022|ref|XP_012467291.1|1.4e-6861.98PREDICTED: homeobox-leucine zipper protein HOX3 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR003106Leu_zip_homeo
IPR009057Homeobox-like_sf
IPR017970Homeobox_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0044212 transcription regulatory region DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G006050.1ClCG01G006050.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 71..125
score: 1.5
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 69..131
score: 2.1
IPR001356Homeobox domainPROFILEPS50071HOMEOBOX_2coord: 67..127
score: 17
IPR003106Leucine zipper, homeobox-associatedPFAMPF02183HALZcoord: 127..160
score: 1.
IPR003106Leucine zipper, homeobox-associatedSMARTSM00340halzcoord: 127..170
score: 1.0
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 55..121
score: 6.6
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 59..128
score: 5.01
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 102..125
scor
NoneNo IPR availableunknownCoilCoilcoord: 140..160
scor
NoneNo IPR availablePANTHERPTHR24326FAMILY NOT NAMEDcoord: 27..195
score: 8.1
NoneNo IPR availablePANTHERPTHR24326:SF114HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-17-RELATEDcoord: 27..195
score: 8.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG01G006050Csa5G576600Cucumber (Chinese Long) v2cuwcgB372
ClCG01G006050MELO3C005327Melon (DHL92) v3.5.1mewcgB019
ClCG01G006050Cla003908Watermelon (97103) v1wcgwmB143
ClCG01G006050Cla97C01G006340Watermelon (97103) v2wcgwmbB089
ClCG01G006050Cla97C07G134460Watermelon (97103) v2wcgwmbB120
ClCG01G006050Bhi12G000756Wax gourdwcgwgoB191
ClCG01G006050CSPI05G19800Wild cucumber (PI 183967)cpiwcgB388
ClCG01G006050Cucsa.280560Cucumber (Gy14) v1cgywcgB484
ClCG01G006050CmaCh04G000390Cucurbita maxima (Rimu)cmawcgB636
ClCG01G006050CmaCh15G009410Cucurbita maxima (Rimu)cmawcgB257
ClCG01G006050CmaCh04G020890Cucurbita maxima (Rimu)cmawcgB634
ClCG01G006050CmoCh04G000370Cucurbita moschata (Rifu)cmowcgB638
ClCG01G006050Cp4.1LG01g06250Cucurbita pepo (Zucchini)cpewcgB371
ClCG01G006050Cp4.1LG13g06910Cucurbita pepo (Zucchini)cpewcgB169
ClCG01G006050CsGy5G019290Cucumber (Gy14) v2cgybwcgB340
ClCG01G006050MELO3C005327.2Melon (DHL92) v3.6.1medwcgB017
ClCG01G006050Carg24910Silver-seed gourdcarwcgB0767
ClCG01G006050Carg27270Silver-seed gourdcarwcgB0320
ClCG01G006050Carg21993Silver-seed gourdcarwcgB0170
ClCG01G006050CsaV3_5G028630Cucumber (Chinese Long) v3cucwcgB394
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG01G006050Cucurbita moschata (Rifu)cmowcgB245
ClCG01G006050Cucurbita moschata (Rifu)cmowcgB347
ClCG01G006050Cucurbita moschata (Rifu)cmowcgB636
ClCG01G006050Cucurbita moschata (Rifu)cmowcgB642
ClCG01G006050Wild cucumber (PI 183967)cpiwcgB382
ClCG01G006050Cucumber (Chinese Long) v2cuwcgB369
ClCG01G006050Melon (DHL92) v3.5.1mewcgB054
ClCG01G006050Watermelon (97103) v1wcgwmB139
ClCG01G006050Cucurbita pepo (Zucchini)cpewcgB024
ClCG01G006050Cucurbita pepo (Zucchini)cpewcgB370
ClCG01G006050Bottle gourd (USVL1VR-Ls)lsiwcgB008
ClCG01G006050Bottle gourd (USVL1VR-Ls)lsiwcgB271
ClCG01G006050Cucumber (Gy14) v2cgybwcgB337
ClCG01G006050Melon (DHL92) v3.6.1medwcgB053
ClCG01G006050Silver-seed gourdcarwcgB0811
ClCG01G006050Silver-seed gourdcarwcgB1022
ClCG01G006050Cucumber (Chinese Long) v3cucwcgB390
ClCG01G006050Watermelon (97103) v2wcgwmbB097
ClCG01G006050Watermelon (97103) v2wcgwmbB111
ClCG01G006050Wax gourdwcgwgoB249
ClCG01G006050Watermelon (Charleston Gray)wcgwcgB102
ClCG01G006050Cucumber (Gy14) v1cgywcgB494
ClCG01G006050Cucurbita maxima (Rimu)cmawcgB351
ClCG01G006050Cucurbita maxima (Rimu)cmawcgB640