CmaCh04G020890 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G020890
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	HB transcription factor
Location	Cma_Chr04 : 14499939 .. 14501662 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATTTTGCCCATCAACTCATCCAACTTGGATCTCTCCATTTCCATGCCCGGCTCCTCCCCGCCTCGTCCTCCTTTCGGTACCCTCTTCAATTATTATAACATCATTGTTTGAATCTCCAATTTTATATTTTTTGTGTATTAGATTGGGAATGATTAAATTTTGGTTTGCATGTTGATTAAATGGAAAGTGGGTGGTTGTGCAGTGCGAGAATTTGACATGAACCGGTTGCCGGAGGTGGGAGACGGCGAGGAGGAGTGGGCGGAGGAAGAAGAAGAGAGCTGCATTAATGACTGTAAGCCAAGGAAAAAGCTTCGTCTATCAAAAGATCAGTCTCGGCTTCTTGAAGAAAGCTTTAGGCTCAATCATACATTAAACCCAGTAACCAAAATCATCTCAAAATTAATGATCTTTGAGTTTCTTAATCATGTATTTTATAAATAAAATTGATTATTTTTTATTTATTTTACAGAAGCAGAAGGAAGCTTTGGCTATGGAGTTGAAGCTGAAGCCAAGGCAAGTTGAAGTCTGGTTTCAGAATCGTAGGGCCAGGTTTGTATTTTTATTCTCTCCTATATTCATTTCTTAGCTCAACAAAATGGTTTTTTTATTATTATTATTTTTTTAATCTAAGTTTCCTTTTAAAAATAATCGATCCGAGCGTTTTACGAAGTTAAATAATTTGTATTAGATGCGTTGAATTGTTAATCTGGATTAAGGAAATTTGTGTTGGGATGTAGAGATATTTAATCTCGATTTTGAAAGTTTGTGTTCGAAGTGTAAAGTTTTTAACGTCGAGGTCCGAGTTTGAAGTTTGTGTTTATATGAATATTTTTTTTATATCTTTTCAAATGTTAAATAAAACAAGAATGTTTTTAATTATTTTTATTGTTTTTTAAAATGTAAATGGAAATATCATAATTATAAAAAATAAACATGAAATGAGGCCTTTTAGCCACTTTAACCCGACCTAAATTAGGGTTAAACACGTTTTAAGTTTGTTAGAGTTTCGTGAATCAAACATCTCTTAAATTCAATTTAAATCTCGTGGATCTTTAGAGACACTAATATTTAACTATTAAACTATCTTTGATTATATCTCTCAAAACTTAACTAAATTTTGGATATATCTTTTTTTTCGTGAATAATGGAACCATTAATCTTTTAAAATAATTATGTTATACACCGAAATTAACAACTTTTAAATGTATACTATATATATATATTTGTTGGCTTAATAAGAAAGGAAAATTAATTACCTAATGTGCATGGGCCTTAATCAATGCATTTGCTGGCCTAAATGTTTGATAGTTATCATGTTAATTGAATTACATAAATACCTATACCTATAAAGACAAGAATTAGTATTTGAGAGGATTTTTTTTGTGTAATAATAATAATAATAATAATATTGTAGGAGCAAGCTGAAGCAAACTGAGAGGGAATGTGAGTATTTGAAGAGATGGTTTGGATCATTGACAGAGCAAAACCGCCGTCTCCGGCAGGAACTGGAGGAGCTGAGAGCCATGAAGGTTGCTCCGACCGCGGTCGTCTCAGGTCACGGCCGACAGCCACCCCTCCCGATTTCTGCAATAACCATGTGTCCCCGATGTGAGCGTGTAAGTGCATCCACTATAACATACGGTAAAGGTGCGAGCAGCGCCAGCACAATGCCACCGGAAGCATTTCTGTCCGCCCTCAAACTGCGGCAGCCGTCGTGA

mRNA sequence

ATGGCAATTTTGCCCATCAACTCATCCAACTTGGATCTCTCCATTTCCATGCCCGGCTCCTCCCCGCCTCGTCCTCCTTTCGTGCGAGAATTTGACATGAACCGGTTGCCGGAGGTGGGAGACGGCGAGGAGGAGTGGGCGGAGGAAGAAGAAGAGAGCTGCATTAATGACTGTAAGCCAAGGAAAAAGCTTCGTCTATCAAAAGATCAGTCTCGGCTTCTTGAAGAAAGCTTTAGGCTCAATCATACATTAAACCCAAAGCAGAAGGAAGCTTTGGCTATGGAGTTGAAGCTGAAGCCAAGGCAAGTTGAAGTCTGGTTTCAGAATCGTAGGGCCAGGAGCAAGCTGAAGCAAACTGAGAGGGAATGTGAGTATTTGAAGAGATGGTTTGGATCATTGACAGAGCAAAACCGCCGTCTCCGGCAGGAACTGGAGGAGCTGAGAGCCATGAAGGTTGCTCCGACCGCGGTCGTCTCAGGTCACGGCCGACAGCCACCCCTCCCGATTTCTGCAATAACCATGTGTCCCCGATGTGAGCGTGTAAGTGCATCCACTATAACATACGGTAAAGGTGCGAGCAGCGCCAGCACAATGCCACCGGAAGCATTTCTGTCCGCCCTCAAACTGCGGCAGCCGTCGTGA

Coding sequence (CDS)

ATGGCAATTTTGCCCATCAACTCATCCAACTTGGATCTCTCCATTTCCATGCCCGGCTCCTCCCCGCCTCGTCCTCCTTTCGTGCGAGAATTTGACATGAACCGGTTGCCGGAGGTGGGAGACGGCGAGGAGGAGTGGGCGGAGGAAGAAGAAGAGAGCTGCATTAATGACTGTAAGCCAAGGAAAAAGCTTCGTCTATCAAAAGATCAGTCTCGGCTTCTTGAAGAAAGCTTTAGGCTCAATCATACATTAAACCCAAAGCAGAAGGAAGCTTTGGCTATGGAGTTGAAGCTGAAGCCAAGGCAAGTTGAAGTCTGGTTTCAGAATCGTAGGGCCAGGAGCAAGCTGAAGCAAACTGAGAGGGAATGTGAGTATTTGAAGAGATGGTTTGGATCATTGACAGAGCAAAACCGCCGTCTCCGGCAGGAACTGGAGGAGCTGAGAGCCATGAAGGTTGCTCCGACCGCGGTCGTCTCAGGTCACGGCCGACAGCCACCCCTCCCGATTTCTGCAATAACCATGTGTCCCCGATGTGAGCGTGTAAGTGCATCCACTATAACATACGGTAAAGGTGCGAGCAGCGCCAGCACAATGCCACCGGAAGCATTTCTGTCCGCCCTCAAACTGCGGCAGCCGTCGTGA

Protein sequence

MAILPINSSNLDLSISMPGSSPPRPPFVREFDMNRLPEVGDGEEEWAEEEEESCINDCKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWFQNRRARSKLKQTERECEYLKRWFGSLTEQNRRLRQELEELRAMKVAPTAVVSGHGRQPPLPISAITMCPRCERVSASTITYGKGASSASTMPPEAFLSALKLRQPS

Homology

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BLAST of CmaCh04G020890 vs. Swiss-Prot
Match: ATB17_ARATH (Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana GN=ATHB-17 PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.5e-51
Identity = 124/213 (58.22%), Postives = 144/213 (67.61%), Query Frame = 1


Query: 1   MAILPINSSNLDLSISMPGSSPPRPPFVRE----------FDMNRLPEVGDGEEEWAEEE 60
           MAILP NSSNLDL+IS+PG S    P   E           DMNRLP   DG++E    +
Sbjct: 74  MAILPENSSNLDLTISVPGFSSS--PLSDEGSGGGRDQLRLDMNRLPSSEDGDDEEFSHD 133

Query: 61  EESCINDCKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWFQNR 120
           + S      PRKKLRL+++QSRLLE+SFR NHTLNPKQKE LA  L L+PRQ+EVWFQNR
Sbjct: 134 DGSA----PPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNR 193

Query: 121 RARSKLKQTERECEYLKRWFGSLTEQNRRLRQELEELRAMKVAPTAVVSGHGRQPPLPIS 180
           RARSKLKQTE ECEYLKRWFGSLTE+N RL +E+EELRAMKV PT V S          S
Sbjct: 194 RARSKLKQTEMECEYLKRWFGSLTEENHRLHREVEELRAMKVGPTTVNSA---------S 253

Query: 181 AITMCPRCERV--SASTITYGKGASSASTMPPE 202
           ++TMCPRCERV  +AS         +  T PP+
Sbjct: 254 SLTMCPRCERVTPAASPSRAVVPVPAKKTFPPQ 271

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BLAST of CmaCh04G020890 vs. Swiss-Prot
Match: HOX3_ORYSJ (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.6e-51
Identity = 112/163 (68.71%), Postives = 134/163 (82.21%), Query Frame = 1


Query: 28  VREFDMNRLPEVGDGEEEWA-----EEEEESCINDCKPRKKLRLSKDQSRLLEESFRLNH 87
           +R+ D+N+ P  G  EEE+      E+EEE  +      KKLRLSK+QSRLLEESFRLNH
Sbjct: 40  MRDLDINQ-PASGGEEEEFPMGSVEEDEEERGVGGPHRPKKLRLSKEQSRLLEESFRLNH 99

Query: 88  TLNPKQKEALAMELKLKPRQVEVWFQNRRARSKLKQTERECEYLKRWFGSLTEQNRRLRQ 147
           TL PKQKEALA++LKL+PRQVEVWFQNRRAR+KLKQTE ECEYLKR FGSLTE+NRRL++
Sbjct: 100 TLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQR 159

Query: 148 ELEELRAMKVAPTAVVSGHGRQPPLPISAITMCPRCERVSAST 186
           E+EELRAM+VAP  V+S H RQ PLP SA+TMCPRCER++A+T
Sbjct: 160 EVEELRAMRVAPPTVLSPHTRQ-PLPASALTMCPRCERITAAT 200

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BLAST of CmaCh04G020890 vs. Swiss-Prot
Match: HOX3_ORYSI (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica GN=HOX3 PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.6e-51
Identity = 112/163 (68.71%), Postives = 134/163 (82.21%), Query Frame = 1


Query: 28  VREFDMNRLPEVGDGEEEWA-----EEEEESCINDCKPRKKLRLSKDQSRLLEESFRLNH 87
           +R+ D+N+ P  G  EEE+      E+EEE  +      KKLRLSK+QSRLLEESFRLNH
Sbjct: 40  MRDLDINQ-PASGGEEEEFPMGSVEEDEEERGVGGPHRPKKLRLSKEQSRLLEESFRLNH 99

Query: 88  TLNPKQKEALAMELKLKPRQVEVWFQNRRARSKLKQTERECEYLKRWFGSLTEQNRRLRQ 147
           TL PKQKEALA++LKL+PRQVEVWFQNRRAR+KLKQTE ECEYLKR FGSLTE+NRRL++
Sbjct: 100 TLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQR 159

Query: 148 ELEELRAMKVAPTAVVSGHGRQPPLPISAITMCPRCERVSAST 186
           E+EELRAM+VAP  V+S H RQ PLP SA+TMCPRCER++A+T
Sbjct: 160 EVEELRAMRVAPPTVLSPHTRQ-PLPASALTMCPRCERITAAT 200

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BLAST of CmaCh04G020890 vs. Swiss-Prot
Match: ATHBX_ARATH (Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana GN=ATHB-X PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.9e-41
Identity = 112/214 (52.34%), Postives = 138/214 (64.49%), Query Frame = 1


Query: 1   MAILPINSSNLDLSISMPGSSPPRPPF-----VREFDMNRLPEVGDGEEEWA-----EEE 60
           MA+ P NSS+LDL+IS+P  SP  P       +R+FD+N+ P+  + + EW         
Sbjct: 1   MALSP-NSSSLDLTISIPSFSPS-PSLGDHHGMRDFDINQTPKTEE-DREWMIGATPHVN 60

Query: 61  EESCINDCKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWFQNR 120
           E+   +  + RKKLRL+K+QS LLEESF  NHTL PKQK+ LA  LKL  RQVEVWFQNR
Sbjct: 61  EDDSNSGGRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNR 120

Query: 121 RARSKLKQTERECEYLKRWFGSLTEQNRRLRQELEELRAMKVAPTAVVSGHGRQPPLPIS 180
           RARSKLK TE ECEYLKRWFGSL EQNRRL+ E+EELRA+K + T              S
Sbjct: 121 RARSKLKHTEMECEYLKRWFGSLKEQNRRLQIEVEELRALKPSST--------------S 180

Query: 181 AITMCPRCERVS------ASTITYGKGASSASTM 199
           A+TMCPRCERV+      ++ +  G   SS S M
Sbjct: 181 ALTMCPRCERVTDAVDNDSNAVQEGAVLSSRSRM 197

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BLAST of CmaCh04G020890 vs. Swiss-Prot
Match: HOX1_ORYSJ (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. japonica GN=HOX1 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-34
Identity = 89/184 (48.37%), Postives = 118/184 (64.13%), Query Frame = 1


Query: 18  PGSSPPRPPFVREFDMNRLPEVGDGEEEWAEEEEESCINDCKPRKKLRLSKDQSRLLEES 77
           PG+S P             P         A ++E+S       RKKLRLSKDQ+ +LE++
Sbjct: 116 PGASSPNSTLSSLSGKRGAPSAATAAAAAASDDEDSGGGS---RKKLRLSKDQAAVLEDT 175

Query: 78  FRLNHTLNPKQKEALAMELKLKPRQVEVWFQNRRARSKLKQTERECEYLKRWFGSLTEQN 137
           F+ ++TLNPKQK ALA +L LKPRQVEVWFQNRRAR+KLKQTE +CE LKR   +LT++N
Sbjct: 176 FKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTDEN 235

Query: 138 RRLRQELEELRAMKVAPTAVVSGH--GRQPPLPISAITMCPRCERVSASTITYGKGASSA 197
           RRL +EL+ELRA+K+A  A    H  G + P P + +TMCP CERV+++  T    + +A
Sbjct: 236 RRLHRELQELRALKLATAAAAPHHLYGARVPPP-TTLTMCPSCERVASAATTTRNNSGAA 295

Query: 198 STMP 200
              P
Sbjct: 296 PARP 295

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BLAST of CmaCh04G020890 vs. TrEMBL
Match: A0A0A0KPM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G576600 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.7e-62
Identity = 141/197 (71.57%), Postives = 159/197 (80.71%), Query Frame = 1


Query: 28  VREFDMNRLPEVGDGEEEWA------EEEEESCIND---CKPRKKLRLSKDQSRLLEESF 87
           VRE DMNR+P  G+ EE+WA      E EEES IN+    +PRKKLRLSKDQSRLLEESF
Sbjct: 12  VRELDMNRVPAEGEAEEDWARGPSVEEGEEESSINNNGGTQPRKKLRLSKDQSRLLEESF 71

Query: 88  RLNHTLNPKQKEALAMELKLKPRQVEVWFQNRRARSKLKQTERECEYLKRWFGSLTEQNR 147
           RLNHTLNPKQKE LAMELKLKPRQVEVWFQNRRARSKLKQTE ECEY+KR FGSLTEQNR
Sbjct: 72  RLNHTLNPKQKEGLAMELKLKPRQVEVWFQNRRARSKLKQTELECEYMKRCFGSLTEQNR 131

Query: 148 RLRQELEELRAMKVAPTAVVSGHGRQPPLPI-SAITMCPRCERVSASTITYG-KGASSAS 207
           RL+ ELEELRA+KVAP AVVS H R PPL + S IT+CPRCER+ +S  T   + A++A+
Sbjct: 132 RLQWELEELRAIKVAPPAVVSRHNRHPPLLMRSTITICPRCERIISSKNTVADQTATTAT 191

Query: 208 TMPPEAFLSALKLRQPS 214
            MP +  LSAL+LRQPS
Sbjct: 192 AMPSKVVLSALQLRQPS 208

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BLAST of CmaCh04G020890 vs. TrEMBL
Match: B9SJ50_RICCO (Homeobox protein, putative OS=Ricinus communis GN=RCOM_0843040 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 3.2e-61
Identity = 140/209 (66.99%), Postives = 165/209 (78.95%), Query Frame = 1


Query: 1   MAILPINSSNLDLSISMPG--SSPPRPPF---VREFDMNRLPEVGDGEEEWA----EEEE 60
           MAI P +SS+L+L+ISMPG  SSP  P +   V++ D+N+LP  G  EEEW     E+EE
Sbjct: 1   MAISPSSSSSLELTISMPGFASSPSVPSYGEGVKDLDINQLP-AGVAEEEWITAGIEDEE 60

Query: 61  ESCINDCKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWFQNRR 120
           ES IN   PRKKLRLSK+QSRLLEESFR +HTLNP+QKEALAM+LKL+PRQVEVWFQNRR
Sbjct: 61  ESNINGGPPRKKLRLSKEQSRLLEESFRQHHTLNPRQKEALAMQLKLRPRQVEVWFQNRR 120

Query: 121 ARSKLKQTERECEYLKRWFGSLTEQNRRLRQELEELRAMKVAPTAVVSGHGRQPPLPISA 180
           ARSKLKQTE ECEYLKRWFGSLTEQNRRL++E+EELRAMKV P  V+S H  + PLP S 
Sbjct: 121 ARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVLSPHSCE-PLPAST 180

Query: 181 ITMCPRCERVSASTIT---YGKGASSAST 198
           +TMCPRCERV+ ST T   + KG +  +T
Sbjct: 181 LTMCPRCERVTTSTNTAAAFDKGPTRTAT 207

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BLAST of CmaCh04G020890 vs. TrEMBL
Match: A0A061EF99_THECC (Homeobox-leucine zipper protein HOX3 OS=Theobroma cacao GN=TCM_010868 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 4.2e-61
Identity = 142/231 (61.47%), Postives = 171/231 (74.03%), Query Frame = 1


Query: 1   MAILPINSSNLDLSISMPG--SSPPRPPF-------VREFDMNRLPEVGDGEEEWA---- 60
           MA+LP  SSNL+L+IS+PG  SSP  P         VR+ D+N++P  G  E+EW     
Sbjct: 1   MAVLPTGSSNLELTISVPGFSSSPSLPSSGDQGGCTVRDLDINQVPS-GGAEDEWITASM 60

Query: 61  EEEEESCINDCKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWF 120
           E+EEESC N   PRKKLRL+K+QSRLLEESFR NHTLNPKQKEALAM+LKL+PRQVEVWF
Sbjct: 61  EDEEESC-NGAPPRKKLRLTKEQSRLLEESFRQNHTLNPKQKEALAMQLKLRPRQVEVWF 120

Query: 121 QNRRARSKLKQTERECEYLKRWFGSLTEQNRRLRQELEELRAMKVAPTAVVSGHGRQPPL 180
           QNRRARSKLKQTE ECEYLKRWFGSLTEQNRRL++E+EELRAMKV P  V+S H  + PL
Sbjct: 121 QNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCE-PL 180

Query: 181 PISAITMCPRCERVSASTITYG-----KGASSASTMPPEAFLSALKLRQPS 214
           P S +TMCPRCERV+ + +  G        ++A+T+  +   SAL+ R  S
Sbjct: 181 PASTLTMCPRCERVTTTALDKGPTKMTAATATATTLSSKVGTSALQSRPSS 228

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BLAST of CmaCh04G020890 vs. TrEMBL
Match: A0A0D2MCI0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G178800 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 4.2e-61
Identity = 140/222 (63.06%), Postives = 167/222 (75.23%), Query Frame = 1


Query: 1   MAILPINSSNLDLSISMPG--SSPPRPPF-------VREFDMNRLPEVGDGEEEWA---- 60
           MA+LP  SS+L+L+IS+PG  SSP  P         VR+ D+N++P     E+EW     
Sbjct: 24  MAVLPTGSSHLELTISVPGFASSPSFPSSGDQGGCTVRDLDINQVP----AEDEWITASM 83

Query: 61  EEEEESCINDCKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWF 120
           E+EEESC N   PRKKLRL+K+QSRLLEESFRLNHTLNPKQK ALA++LKL+PRQVEVWF
Sbjct: 84  EDEEESCNNGAPPRKKLRLTKEQSRLLEESFRLNHTLNPKQKGALALQLKLRPRQVEVWF 143

Query: 121 QNRRARSKLKQTERECEYLKRWFGSLTEQNRRLRQELEELRAMKVAPTAVVSGHGRQPPL 180
           QNRRARSKLKQTE ECEYLKRWFGSLTEQNRRL++E+EELRAMKVAP  V+S H  + PL
Sbjct: 144 QNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVAPPTVISPHSCE-PL 203

Query: 181 PISAITMCPRCERVSAST---ITYGKGASSASTMPPEAFLSA 207
           P S +TMCPRCERV+ +T   I  G    +A+T P    LS+
Sbjct: 204 PASTLTMCPRCERVTTTTTAAIEKGSAKMTAATNPTATTLSS 240

[Close]

BLAST of CmaCh04G020890 vs. TrEMBL
Match: A0A0B0MRC6_GOSAR (Homeobox-leucine zipper HOX3 OS=Gossypium arboreum GN=F383_25892 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 7.1e-61
Identity = 134/198 (67.68%), Postives = 158/198 (79.80%), Query Frame = 1


Query: 1   MAILPINSSNLDLSISMPG--SSPPRPPF-------VREFDMNRLPEVGDGEEEWA---- 60
           MA+LP  SS+L+L+IS+PG  SSP  P         VR+ D+N++P     E+EW     
Sbjct: 1   MAVLPTGSSHLELTISVPGFASSPSFPSSGDQGGCTVRDLDINQVP----AEDEWITASM 60

Query: 61  EEEEESCINDCKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWF 120
           E+EEESC N   PRKKLRL+K+QSRLLEESFRLNHTLNPKQKEALA++LKL+PRQVEVWF
Sbjct: 61  EDEEESCNNGAPPRKKLRLTKEQSRLLEESFRLNHTLNPKQKEALALQLKLRPRQVEVWF 120

Query: 121 QNRRARSKLKQTERECEYLKRWFGSLTEQNRRLRQELEELRAMKVAPTAVVSGHGRQPPL 180
           QNRRARSKLKQTE ECEYLKRWFGSLTEQNRRL++E+EELRAMKVAP  V+S H  + PL
Sbjct: 121 QNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVAPPTVISPHSCE-PL 180

Query: 181 PISAITMCPRCERVSAST 186
           P S +TMCPRCERV+ +T
Sbjct: 181 PASTLTMCPRCERVTTTT 193

[Close]

BLAST of CmaCh04G020890 vs. TAIR10
Match: AT2G01430.1 (AT2G01430.1 homeobox-leucine zipper protein 17)

HSP 1 Score: 204.1 bits (518), Expect = 8.3e-53
Identity = 124/213 (58.22%), Postives = 144/213 (67.61%), Query Frame = 1


Query: 1   MAILPINSSNLDLSISMPGSSPPRPPFVRE----------FDMNRLPEVGDGEEEWAEEE 60
           MAILP NSSNLDL+IS+PG S    P   E           DMNRLP   DG++E    +
Sbjct: 74  MAILPENSSNLDLTISVPGFSSS--PLSDEGSGGGRDQLRLDMNRLPSSEDGDDEEFSHD 133

Query: 61  EESCINDCKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWFQNR 120
           + S      PRKKLRL+++QSRLLE+SFR NHTLNPKQKE LA  L L+PRQ+EVWFQNR
Sbjct: 134 DGSA----PPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNR 193

Query: 121 RARSKLKQTERECEYLKRWFGSLTEQNRRLRQELEELRAMKVAPTAVVSGHGRQPPLPIS 180
           RARSKLKQTE ECEYLKRWFGSLTE+N RL +E+EELRAMKV PT V S          S
Sbjct: 194 RARSKLKQTEMECEYLKRWFGSLTEENHRLHREVEELRAMKVGPTTVNSA---------S 253

Query: 181 AITMCPRCERV--SASTITYGKGASSASTMPPE 202
           ++TMCPRCERV  +AS         +  T PP+
Sbjct: 254 SLTMCPRCERVTPAASPSRAVVPVPAKKTFPPQ 271

[Close]

BLAST of CmaCh04G020890 vs. TAIR10
Match: AT1G70920.1 (AT1G70920.1 homeobox-leucine zipper protein 18)

HSP 1 Score: 168.7 bits (426), Expect = 3.9e-42
Identity = 112/214 (52.34%), Postives = 138/214 (64.49%), Query Frame = 1


Query: 1   MAILPINSSNLDLSISMPGSSPPRPPF-----VREFDMNRLPEVGDGEEEWA-----EEE 60
           MA+ P NSS+LDL+IS+P  SP  P       +R+FD+N+ P+  + + EW         
Sbjct: 1   MALSP-NSSSLDLTISIPSFSPS-PSLGDHHGMRDFDINQTPKTEE-DREWMIGATPHVN 60

Query: 61  EESCINDCKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWFQNR 120
           E+   +  + RKKLRL+K+QS LLEESF  NHTL PKQK+ LA  LKL  RQVEVWFQNR
Sbjct: 61  EDDSNSGGRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNR 120

Query: 121 RARSKLKQTERECEYLKRWFGSLTEQNRRLRQELEELRAMKVAPTAVVSGHGRQPPLPIS 180
           RARSKLK TE ECEYLKRWFGSL EQNRRL+ E+EELRA+K + T              S
Sbjct: 121 RARSKLKHTEMECEYLKRWFGSLKEQNRRLQIEVEELRALKPSST--------------S 180

Query: 181 AITMCPRCERVS------ASTITYGKGASSASTM 199
           A+TMCPRCERV+      ++ +  G   SS S M
Sbjct: 181 ALTMCPRCERVTDAVDNDSNAVQEGAVLSSRSRM 197

[Close]

BLAST of CmaCh04G020890 vs. TAIR10
Match: AT2G44910.1 (AT2G44910.1 homeobox-leucine zipper protein 4)

HSP 1 Score: 142.9 bits (359), Expect = 2.3e-34
Identity = 82/148 (55.41%), Postives = 106/148 (71.62%), Query Frame = 1


Query: 50  EEESCINDCKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWFQN 109
           ++E   N    RKKLRLSKDQ+ +LEE+F+ + TLNPKQK ALA +L L+ RQVEVWFQN
Sbjct: 151 DDEDGGNGDGSRKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQN 210

Query: 110 RRARSKLKQTERECEYLKRWFGSLTEQNRRLRQELEELRAMKVAPTAVVSGHGRQPPLPI 169
           RRAR+KLKQTE +CEYLKR   +LTE+NRRL++E+ ELRA+K++P      H      P 
Sbjct: 211 RRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRALKLSP------HLYMHMTPP 270

Query: 170 SAITMCPRCERVSASTITYGKGASSAST 198
           + +TMCP CERVS+S  T     S+ +T
Sbjct: 271 TTLTMCPSCERVSSSAATVTAAPSTTTT 292

[Close]

BLAST of CmaCh04G020890 vs. TAIR10
Match: AT5G06710.1 (AT5G06710.1 homeobox from Arabidopsis thaliana)

HSP 1 Score: 141.7 bits (356), Expect = 5.1e-34
Identity = 77/124 (62.10%), Postives = 95/124 (76.61%), Query Frame = 1


Query: 61  RKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWFQNRRARSKLKQTE 120
           RKKLRLSKDQS  LE+SF+ + TLNPKQK ALA +L L+PRQVEVWFQNRRAR+KLKQTE
Sbjct: 189 RKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTE 248

Query: 121 RECEYLKRWFGSLTEQNRRLRQELEELRAMKVAPTAVVSGHGRQPPLPISAITMCPRCER 180
            +CEYLKR   SLTE+NRRL++E++ELR +K +    +        LP + +TMCP CER
Sbjct: 249 VDCEYLKRCCESLTEENRRLQKEVKELRTLKTSTPFYMQ-------LPATTLTMCPSCER 305

Query: 181 VSAS 185
           V+ S
Sbjct: 309 VATS 305

[Close]

BLAST of CmaCh04G020890 vs. TAIR10
Match: AT3G60390.1 (AT3G60390.1 homeobox-leucine zipper protein 3)

HSP 1 Score: 141.7 bits (356), Expect = 5.1e-34
Identity = 86/168 (51.19%), Postives = 118/168 (70.24%), Query Frame = 1


Query: 47  AEEEEESCINDCKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVW 106
           +++E+ S   D   RKKLRLSK+Q+ +LEE+F+ + TLNPKQK ALA +L L+ RQVEVW
Sbjct: 147 SDDEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVW 206

Query: 107 FQNRRARSKLKQTERECEYLKRWFGSLTEQNRRLRQELEELRAMKVAPTAVVSGHGRQPP 166
           FQNRRAR+KLKQTE +CEYLKR   +LT++NRRL++E+ ELRA+K++P      H     
Sbjct: 207 FQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALKLSP------HLYMHM 266

Query: 167 LPISAITMCPRCERV---SASTITYGKGASSASTMPPEAFLSALKLRQ 212
            P + +TMCP CERV   S+S+       +S+S M P +  +A+ LRQ
Sbjct: 267 KPPTTLTMCPSCERVAVTSSSSSVAPPVMNSSSPMGPMSPWAAMPLRQ 308

[Close]

BLAST of CmaCh04G020890 vs. NCBI nr
Match: gi|778704059|ref|XP_011655468.1| (PREDICTED: homeobox-leucine zipper protein HOX3-like [Cucumis sativus])

HSP 1 Score: 275.8 bits (704), Expect = 6.4e-71
Identity = 162/224 (72.32%), Postives = 180/224 (80.36%), Query Frame = 1


Query: 5   PINSSNLDLSISMPG-SSPP---RPPFVREFDMNRLPEVGDGEEEWA------EEEEESC 64
           PINSSNLDLSISMPG SS P   RP FVRE DMNR+P  G+ EE+WA      E EEES 
Sbjct: 6   PINSSNLDLSISMPGFSSSPLTTRPLFVRELDMNRVPAEGEAEEDWARGPSVEEGEEESS 65

Query: 65  IND---CKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWFQNRR 124
           IN+    +PRKKLRLSKDQSRLLEESFRLNHTLNPKQKE LAMELKLKPRQVEVWFQNRR
Sbjct: 66  INNNGGTQPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEGLAMELKLKPRQVEVWFQNRR 125

Query: 125 ARSKLKQTERECEYLKRWFGSLTEQNRRLRQELEELRAMKVAPTAVVSGHGRQPPLPI-S 184
           ARSKLKQTE ECEY+KR FGSLTEQNRRL+ ELEELRA+KVAP AVVS H R PPL + S
Sbjct: 126 ARSKLKQTELECEYMKRCFGSLTEQNRRLQWELEELRAIKVAPPAVVSRHNRHPPLLMRS 185

Query: 185 AITMCPRCERVSASTITYG-KGASSASTMPPEAFLSALKLRQPS 214
            IT+CPRCER+ +S  T   + A++A+ MP +  LSAL+LRQPS
Sbjct: 186 TITICPRCERIISSKNTVADQTATTATAMPSKVVLSALQLRQPS 229

[Close]

BLAST of CmaCh04G020890 vs. NCBI nr
Match: gi|659072906|ref|XP_008467159.1| (PREDICTED: homeobox-leucine zipper protein HOX3-like [Cucumis melo])

HSP 1 Score: 271.9 bits (694), Expect = 9.2e-70
Identity = 164/231 (71.00%), Postives = 181/231 (78.35%), Query Frame = 1


Query: 1   MAIL-PINSSNLDLSISMPG--SSPP--RPPFVREFDMNRLPEVGDGEEEWA-------E 60
           MA L PINSSNLDLSISMPG  SS P  RP  VRE DMNR+P  G+ E +WA       E
Sbjct: 1   MAFLDPINSSNLDLSISMPGFSSSLPTTRPLLVRELDMNRVPAEGEAEADWARGQSVEEE 60

Query: 61  EEEESCIND----CKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVE 120
            EEES IN+     +PRKKLRLSKDQSRLLEESFRLNHTLNPKQKE LAMELKLKPRQVE
Sbjct: 61  GEEESSINNNNGGTQPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEGLAMELKLKPRQVE 120

Query: 121 VWFQNRRARSKLKQTERECEYLKRWFGSLTEQNRRLRQELEELRAMKVAPTAVVSGHGR- 180
           VWFQNRRARSKLKQTE ECEY+KR FGSLTEQNRRL+ ELEELRA+KVAP AVVS H R 
Sbjct: 121 VWFQNRRARSKLKQTELECEYMKRCFGSLTEQNRRLQWELEELRAIKVAPPAVVSRHNRS 180

Query: 181 QPPLPISAITMCPRCERVSASTITYGKGASSAST-MPPEAFLSALKLRQPS 214
           QPPL  S IT+CPRCER++++  T  + A++ +T M  E  LSALKLRQPS
Sbjct: 181 QPPLSRSTITICPRCERITSNKNTVAENATTTATAMQSEVVLSALKLRQPS 231

[Close]

BLAST of CmaCh04G020890 vs. NCBI nr
Match: gi|700196341|gb|KGN51518.1| (hypothetical protein Csa_5G576600 [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 2.4e-62
Identity = 141/197 (71.57%), Postives = 159/197 (80.71%), Query Frame = 1


Query: 28  VREFDMNRLPEVGDGEEEWA------EEEEESCIND---CKPRKKLRLSKDQSRLLEESF 87
           VRE DMNR+P  G+ EE+WA      E EEES IN+    +PRKKLRLSKDQSRLLEESF
Sbjct: 12  VRELDMNRVPAEGEAEEDWARGPSVEEGEEESSINNNGGTQPRKKLRLSKDQSRLLEESF 71

Query: 88  RLNHTLNPKQKEALAMELKLKPRQVEVWFQNRRARSKLKQTERECEYLKRWFGSLTEQNR 147
           RLNHTLNPKQKE LAMELKLKPRQVEVWFQNRRARSKLKQTE ECEY+KR FGSLTEQNR
Sbjct: 72  RLNHTLNPKQKEGLAMELKLKPRQVEVWFQNRRARSKLKQTELECEYMKRCFGSLTEQNR 131

Query: 148 RLRQELEELRAMKVAPTAVVSGHGRQPPLPI-SAITMCPRCERVSASTITYG-KGASSAS 207
           RL+ ELEELRA+KVAP AVVS H R PPL + S IT+CPRCER+ +S  T   + A++A+
Sbjct: 132 RLQWELEELRAIKVAPPAVVSRHNRHPPLLMRSTITICPRCERIISSKNTVADQTATTAT 191

Query: 208 TMPPEAFLSALKLRQPS 214
            MP +  LSAL+LRQPS
Sbjct: 192 AMPSKVVLSALQLRQPS 208

[Close]

BLAST of CmaCh04G020890 vs. NCBI nr
Match: gi|223534666|gb|EEF36359.1| (homeobox protein, putative [Ricinus communis])

HSP 1 Score: 243.0 bits (619), Expect = 4.6e-61
Identity = 140/209 (66.99%), Postives = 165/209 (78.95%), Query Frame = 1


Query: 1   MAILPINSSNLDLSISMPG--SSPPRPPF---VREFDMNRLPEVGDGEEEWA----EEEE 60
           MAI P +SS+L+L+ISMPG  SSP  P +   V++ D+N+LP  G  EEEW     E+EE
Sbjct: 1   MAISPSSSSSLELTISMPGFASSPSVPSYGEGVKDLDINQLP-AGVAEEEWITAGIEDEE 60

Query: 61  ESCINDCKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWFQNRR 120
           ES IN   PRKKLRLSK+QSRLLEESFR +HTLNP+QKEALAM+LKL+PRQVEVWFQNRR
Sbjct: 61  ESNINGGPPRKKLRLSKEQSRLLEESFRQHHTLNPRQKEALAMQLKLRPRQVEVWFQNRR 120

Query: 121 ARSKLKQTERECEYLKRWFGSLTEQNRRLRQELEELRAMKVAPTAVVSGHGRQPPLPISA 180
           ARSKLKQTE ECEYLKRWFGSLTEQNRRL++E+EELRAMKV P  V+S H  + PLP S 
Sbjct: 121 ARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVLSPHSCE-PLPAST 180

Query: 181 ITMCPRCERVSASTIT---YGKGASSAST 198
           +TMCPRCERV+ ST T   + KG +  +T
Sbjct: 181 LTMCPRCERVTTSTNTAAAFDKGPTRTAT 207

[Close]

BLAST of CmaCh04G020890 vs. NCBI nr
Match: gi|1000952192|ref|XP_002526019.2| (PREDICTED: homeobox-leucine zipper protein HOX3 [Ricinus communis])

HSP 1 Score: 243.0 bits (619), Expect = 4.6e-61
Identity = 140/209 (66.99%), Postives = 165/209 (78.95%), Query Frame = 1


Query: 1   MAILPINSSNLDLSISMPG--SSPPRPPF---VREFDMNRLPEVGDGEEEWA----EEEE 60
           MAI P +SS+L+L+ISMPG  SSP  P +   V++ D+N+LP  G  EEEW     E+EE
Sbjct: 2   MAISPSSSSSLELTISMPGFASSPSVPSYGEGVKDLDINQLP-AGVAEEEWITAGIEDEE 61

Query: 61  ESCINDCKPRKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWFQNRR 120
           ES IN   PRKKLRLSK+QSRLLEESFR +HTLNP+QKEALAM+LKL+PRQVEVWFQNRR
Sbjct: 62  ESNINGGPPRKKLRLSKEQSRLLEESFRQHHTLNPRQKEALAMQLKLRPRQVEVWFQNRR 121

Query: 121 ARSKLKQTERECEYLKRWFGSLTEQNRRLRQELEELRAMKVAPTAVVSGHGRQPPLPISA 180
           ARSKLKQTE ECEYLKRWFGSLTEQNRRL++E+EELRAMKV P  V+S H  + PLP S 
Sbjct: 122 ARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVLSPHSCE-PLPAST 181

Query: 181 ITMCPRCERVSASTIT---YGKGASSAST 198
           +TMCPRCERV+ ST T   + KG +  +T
Sbjct: 182 LTMCPRCERVTTSTNTAAAFDKGPTRTAT 208

The following BLAST results are available for this feature:

BLAST of CmaCh04G020890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATB17_ARATH	1.5e-51	58.22	Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana GN=ATHB-17 PE=2 ...	[more]
HOX3_ORYSJ	5.6e-51	68.71	Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=...	[more]
HOX3_ORYSI	5.6e-51	68.71	Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica GN=HOX3 PE=1 ...	[more]
ATHBX_ARATH	6.9e-41	52.34	Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana GN=ATHB-X PE=2 SV...	[more]
HOX1_ORYSJ	2.1e-34	48.37	Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. japonica GN=HOX1 PE=...	[more]

BLAST of CmaCh04G020890 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPM6_CUCSA	1.7e-62	71.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G576600 PE=4 SV=1	[more]
B9SJ50_RICCO	3.2e-61	66.99	Homeobox protein, putative OS=Ricinus communis GN=RCOM_0843040 PE=4 SV=1	[more]
A0A061EF99_THECC	4.2e-61	61.47	Homeobox-leucine zipper protein HOX3 OS=Theobroma cacao GN=TCM_010868 PE=4 SV=1	[more]
A0A0D2MCI0_GOSRA	4.2e-61	63.06	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G178800 PE=4 SV=1	[more]
A0A0B0MRC6_GOSAR	7.1e-61	67.68	Homeobox-leucine zipper HOX3 OS=Gossypium arboreum GN=F383_25892 PE=4 SV=1	[more]

BLAST of CmaCh04G020890 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01430.1	8.3e-53	58.22	homeobox-leucine zipper protein 17	[more]
AT1G70920.1	3.9e-42	52.34	homeobox-leucine zipper protein 18	[more]
AT2G44910.1	2.3e-34	55.41	homeobox-leucine zipper protein 4	[more]
AT5G06710.1	5.1e-34	62.10	homeobox from Arabidopsis thaliana	[more]
AT3G60390.1	5.1e-34	51.19	homeobox-leucine zipper protein 3	[more]

BLAST of CmaCh04G020890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778704059\|ref\|XP_011655468.1\|	6.4e-71	72.32	PREDICTED: homeobox-leucine zipper protein HOX3-like [Cucumis sativus]	[more]
gi\|659072906\|ref\|XP_008467159.1\|	9.2e-70	71.00	PREDICTED: homeobox-leucine zipper protein HOX3-like [Cucumis melo]	[more]
gi\|700196341\|gb\|KGN51518.1\|	2.4e-62	71.57	hypothetical protein Csa_5G576600 [Cucumis sativus]	[more]
gi\|223534666\|gb\|EEF36359.1\|	4.6e-61	66.99	homeobox protein, putative [Ricinus communis]	[more]
gi\|1000952192\|ref\|XP_002526019.2\|	4.6e-61	66.99	PREDICTED: homeobox-leucine zipper protein HOX3 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001356	Homeobox_dom
IPR003106	Leu_zip_homeo
IPR009057	Homeobox-like_sf
IPR017970	Homeobox_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0044212	transcription regulatory region DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G020890.1	CmaCh04G020890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	PFAM	PF00046	Homeobox	coord: 61..115 score: 1.4
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 59..121 score: 9.4
IPR001356	Homeobox domain	PROFILE	PS50071	HOMEOBOX_2	coord: 57..117 score: 16
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 117..151 score: 4.3
IPR003106	Leucine zipper, homeobox-associated	SMART	SM00340	halz	coord: 117..160 score: 1.5
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 61..115 score: 8.1
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 55..118 score: 4.15
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 92..115 scor
None	No IPR available	unknown	Coil	Coil	coord: 130..153 scor
None	No IPR available	PANTHER	PTHR24326	FAMILY NOT NAMED	coord: 25..181 score: 9.5
None	No IPR available	PANTHER	PTHR24326:SF114	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-17-RELATED	coord: 25..181 score: 9.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G020890	Cucsa.280560	Cucumber (Gy14) v1	cgycmaB0782
CmaCh04G020890	Cla003908	Watermelon (97103) v1	cmawmB710
CmaCh04G020890	Csa5G576600	Cucumber (Chinese Long) v2	cmacuB752
CmaCh04G020890	MELO3C005327	Melon (DHL92) v3.5.1	cmameB637
CmaCh04G020890	ClCG01G006050	Watermelon (Charleston Gray)	cmawcgB634
CmaCh04G020890	CSPI05G19800	Wild cucumber (PI 183967)	cmacpiB760
CmaCh04G020890	Cp4.1LG00g02990	Cucurbita pepo (Zucchini)	cmacpeB693
CmaCh04G020890	Cp4.1LG13g06910	Cucurbita pepo (Zucchini)	cmacpeB710
CmaCh04G020890	MELO3C005327.2	Melon (DHL92) v3.6.1	cmamedB723
CmaCh04G020890	CsaV3_5G028630	Cucumber (Chinese Long) v3	cmacucB0888
CmaCh04G020890	Cla97C01G006340	Watermelon (97103) v2	cmawmbB705
CmaCh04G020890	Bhi12G000756	Wax gourd	cmawgoB0828
CmaCh04G020890	CsGy5G019290	Cucumber (Gy14) v2	cgybcmaB677
CmaCh04G020890	Carg24910	Silver-seed gourd	carcmaB1103
CmaCh04G020890	Carg27270	Silver-seed gourd	carcmaB0461

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G020890	CmaCh15G009410	Cucurbita maxima (Rimu)	cmacmaB315

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G020890	Cucumber (Gy14) v2	cgybcmaB657
CmaCh04G020890	Melon (DHL92) v3.6.1	cmamedB747
CmaCh04G020890	Silver-seed gourd	carcmaB1169
CmaCh04G020890	Silver-seed gourd	carcmaB1458
CmaCh04G020890	Cucumber (Chinese Long) v3	cmacucB0874
CmaCh04G020890	Watermelon (97103) v2	cmawmbB768
CmaCh04G020890	Wax gourd	cmawgoB0908
CmaCh04G020890	Cucurbita maxima (Rimu)	cmacmaB323
CmaCh04G020890	Cucurbita maxima (Rimu)	cmacmaB408
CmaCh04G020890	Cucurbita maxima (Rimu)	cmacmaB537
CmaCh04G020890	Cucumber (Gy14) v1	cgycmaB0807
CmaCh04G020890	Cucurbita moschata (Rifu)	cmacmoB685
CmaCh04G020890	Cucurbita moschata (Rifu)	cmacmoB714
CmaCh04G020890	Cucurbita moschata (Rifu)	cmacmoB729
CmaCh04G020890	Cucurbita moschata (Rifu)	cmacmoB743
CmaCh04G020890	Wild cucumber (PI 183967)	cmacpiB742
CmaCh04G020890	Cucumber (Chinese Long) v2	cmacuB735
CmaCh04G020890	Melon (DHL92) v3.5.1	cmameB661
CmaCh04G020890	Watermelon (Charleston Gray)	cmawcgB665
CmaCh04G020890	Watermelon (97103) v1	cmawmB709
CmaCh04G020890	Cucurbita pepo (Zucchini)	cmacpeB698
CmaCh04G020890	Cucurbita pepo (Zucchini)	cmacpeB721
CmaCh04G020890	Cucurbita pepo (Zucchini)	cmacpeB737
CmaCh04G020890	Bottle gourd (USVL1VR-Ls)	cmalsiB622
CmaCh04G020890	Bottle gourd (USVL1VR-Ls)	cmalsiB683