CmaCh15G009410 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACCGGGTACCGGTGGTAGGAGAAGCGGCGGAGGAAGAACGAGCGGTGGCGGAGAGGACGGAGGAGGAAGAGGAGAGCTGCAGCATTAACAATGGAGGTGGTCAGCCAAGGAAGAAGCTTAGTCTATCAAAGCATCAGTCTCGTCTCCTTGAAGATATCTTCAGGCATAACCATTCATTAAACCCTGTGAGCAAAATCATCTCAATATTAATTAATGATTTTCTAATTCCTTAATTAATTAATTTTTAATTTTTAATTTTTAATTTTTAATTTTTTTTAGAAGCAAAAGGAAGCCTTGGCTATGGCACTTCAGCTGAAGCCAAGGCAAGTTGAAGTCTGGTTTCAGAATCGTAGGGCCAGGTAATTTGTATTCATAATTATATTTCATTTTATTTTTTAAACATTTAATTAGAACAAAATAAATAAATAAATAAATAAAATAAATTATTTTTTTATTTTGTTTTAAGATACTTGTTCATGAAATTGTAATATATTGTATCCATATAGTTTTTTTTTCCACTATTTGTGAAAAAGAAAAAATATATATATATATTTGTAAAATATTCTATAAGAATATATGTTAAAATTTTGGTTCTTAAAAGAAATAAATAAGGTTAGTTATTATTAAAATTTAACAATAATAATAAAGAAAATTATTATGAAAACAATCAATAAAAGATACAATTATTTGATTTTTTTAAAAATTAAACTTAATTATAAATACTAATTTTATAATTTAGATATAATAATTATTAGTTAATCAAAATTTTGAAAAGCATTAAAAACAAATAAAAAAAGTTGTTAAAAAATAAAATTAATAAAATAAATAATTTTATAGAGTAAAAATAATAAAAACACAAAAGTATTTTTTTTTTTTATAAATAAAATAAAATAAGAAATATAAGTTGAATTAATTTGAATAAGTTTTAATTAAGAAAATAAAAAAAAAATCAATAACTAATATTCATTTAACTAATTTAATGGACAACTCATATCCAAATTTTTATTTAATAAACCAAAGTTCGAAGCGTTGGACCAATGAGTTCGATTATTGAAAGTTGAGCTAGCCTTGTCTAACTTAAATTACCTTAATTTGTTATGCTTTTTGTCGTGACCCGACCCACAACGAATATAATGACTTTCATGAATTTCTTTATTTTAAAAAAAAAAACTATAAATAAAATTGTTATCCAACCAAACCTAAACCTTTTATAAGGTACCATCTTAAATTTATATATTTTTGTTGACTTTCAATTAATTATCATGGCCTAAATTGATATATTACCAAATGAGTAAAAAGTATACATTTATTTATTTTTTTGTTTCTTACCTTCTAAAATTAAAAAATAAAAAATATAGAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTAAATGTGCTTGATAACGGTTTCCTGTTTATAGTTTTATTGTTTTTTTGTAACATTTTTATTAATAACCTTGAAATTCTAATTTTGTTTATTTTTTAAAGATACTCTTTTCTCATTTCTTCAACACTATATCCATTTTTTTCAGAAATTTCTAAAATTTATAATAAATATAAGAAATTTCAATATCCAAACCATAAATTTGTTCGAAAAATAATTATTTTGAGAGATTTAAAAAAAAAATACTAATAAAATCTATCATTCAAATTTGATGTGCTGTCATTTTTTTTTTTTTTTGTTCTCTGTTCAATTTGTCTTAAATAATATTGAGTTGCATAATTATTTCAATTAAACTAACAAATTTTGTAAATTGTTAACGATCAACTGCTAATTGATATATATTTTTGTGTGTCGATTTGGTTATGTGACATTTAGTTGGTAAGGTTTGACATTGTAGCATATTTATATTTCTCTAATTCAATAATATATTTTCTTTTAGTGGAGGATTAAGTTGAATTTTTGAAAAACTGATAATTCGGTATGATTTTTATCGGGTCAACCTGATTGACTTGAAAATAGGGTTATAATCTAATCCTACGTCCTAATAATTTATAAAATTAGTAGAGTGGTGTTTATATTTTTGTCAAAATTTGATCTAACAAATAACAGTAATATTATAGGAGCAAGCTGAAGCAAACTGAGATGGAATACCAGTATTTAAGGAGGTGGTTTGGCTCATTGACGGAGCAAAACCGCCGGCTGCGGCGGGAACTGGAGGAGCTCAGAGCTATTAAGGTTGCTCTCCCAGCCGTCGACTCAAGCCACGGCCGACAGCCACCCCTCCCGGTGTCCACTATAACCATGTGTCCCCAGTGCAAGCGCGTAACCGCTGCCACCATAACATCTAGTAGGGCTGCAGCCACCCAGACCGCCATTGCCACCACTGCAACGCCACCGAAGGCGGTTCGGTCCGCCCTCAAGTTGCAGCAGCCGTCGCAAGGTTGA ATGAACCGGGTACCGGTGGTAGGAGAAGCGGCGGAGGAAGAACGAGCGGTGGCGGAGAGGACGGAGGAGGAAGAGGAGAGCTGCAGCATTAACAATGGAGGTGGTCAGCCAAGGAAGAAGCTTAGTCTATCAAAGCATCAGTCTCGTCTCCTTGAAGATATCTTCAGGCATAACCATTCATTAAACCCTAAGCAAAAGGAAGCCTTGGCTATGGCACTTCAGCTGAAGCCAAGGCAAGTTGAAGTCTGGTTTCAGAATCGTAGGGCCAGGAGCAAGCTGAAGCAAACTGAGATGGAATACCAGTATTTAAGGAGGTGGTTTGGCTCATTGACGGAGCAAAACCGCCGGCTGCGGCGGGAACTGGAGGAGCTCAGAGCTATTAAGGTTGCTCTCCCAGCCGTCGACTCAAGCCACGGCCGACAGCCACCCCTCCCGGTGTCCACTATAACCATGTGTCCCCAGTGCAAGCGCGTAACCGCTGCCACCATAACATCTAGTAGGGCTGCAGCCACCCAGACCGCCATTGCCACCACTGCAACGCCACCGAAGGCGGTTCGGTCCGCCCTCAAGTTGCAGCAGCCGTCGCAAGGTTGA ATGAACCGGGTACCGGTGGTAGGAGAAGCGGCGGAGGAAGAACGAGCGGTGGCGGAGAGGACGGAGGAGGAAGAGGAGAGCTGCAGCATTAACAATGGAGGTGGTCAGCCAAGGAAGAAGCTTAGTCTATCAAAGCATCAGTCTCGTCTCCTTGAAGATATCTTCAGGCATAACCATTCATTAAACCCTAAGCAAAAGGAAGCCTTGGCTATGGCACTTCAGCTGAAGCCAAGGCAAGTTGAAGTCTGGTTTCAGAATCGTAGGGCCAGGAGCAAGCTGAAGCAAACTGAGATGGAATACCAGTATTTAAGGAGGTGGTTTGGCTCATTGACGGAGCAAAACCGCCGGCTGCGGCGGGAACTGGAGGAGCTCAGAGCTATTAAGGTTGCTCTCCCAGCCGTCGACTCAAGCCACGGCCGACAGCCACCCCTCCCGGTGTCCACTATAACCATGTGTCCCCAGTGCAAGCGCGTAACCGCTGCCACCATAACATCTAGTAGGGCTGCAGCCACCCAGACCGCCATTGCCACCACTGCAACGCCACCGAAGGCGGTTCGGTCCGCCCTCAAGTTGCAGCAGCCGTCGCAAGGTTGA MNRVPVVGEAAEEERAVAERTEEEEESCSINNGGGQPRKKLSLSKHQSRLLEDIFRHNHSLNPKQKEALAMALQLKPRQVEVWFQNRRARSKLKQTEMEYQYLRRWFGSLTEQNRRLRRELEELRAIKVALPAVDSSHGRQPPLPVSTITMCPQCKRVTAATITSSRAAATQTAIATTATPPKAVRSALKLQQPSQG
BLAST of CmaCh15G009410 vs. Swiss-Prot
Match: HOX3_ORYSI (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica GN=HOX3 PE=1 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 2.6e-42 Identity = 103/170 (60.59%), Postives = 125/170 (73.53%), Query Frame = 1
BLAST of CmaCh15G009410 vs. Swiss-Prot
Match: HOX3_ORYSJ (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=1 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 2.6e-42 Identity = 103/170 (60.59%), Postives = 125/170 (73.53%), Query Frame = 1
BLAST of CmaCh15G009410 vs. Swiss-Prot
Match: ATB17_ARATH (Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana GN=ATHB-17 PE=2 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 7.8e-39 Identity = 92/154 (59.74%), Postives = 113/154 (73.38%), Query Frame = 1
BLAST of CmaCh15G009410 vs. Swiss-Prot
Match: ATHBX_ARATH (Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana GN=ATHB-X PE=2 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 5.4e-32 Identity = 86/168 (51.19%), Postives = 105/168 (62.50%), Query Frame = 1
BLAST of CmaCh15G009410 vs. Swiss-Prot
Match: HOX1_ORYSI (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. indica GN=HOX1 PE=1 SV=2) HSP 1 Score: 138.7 bits (348), Expect = 7.1e-32 Identity = 88/175 (50.29%), Postives = 117/175 (66.86%), Query Frame = 1
BLAST of CmaCh15G009410 vs. TrEMBL
Match: A0A0A0KPM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G576600 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 7.1e-55 Identity = 135/198 (68.18%), Postives = 152/198 (76.77%), Query Frame = 1
BLAST of CmaCh15G009410 vs. TrEMBL
Match: V4TLZ8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016477mg PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 7.1e-47 Identity = 110/169 (65.09%), Postives = 127/169 (75.15%), Query Frame = 1
BLAST of CmaCh15G009410 vs. TrEMBL
Match: A0A067FF13_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026325mg PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 7.1e-47 Identity = 110/169 (65.09%), Postives = 127/169 (75.15%), Query Frame = 1
BLAST of CmaCh15G009410 vs. TrEMBL
Match: B9HW68_POPTR (Homeobox-leucine zipper protein 17 OS=Populus trichocarpa GN=POPTR_0010s12300g PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 9.2e-47 Identity = 110/176 (62.50%), Postives = 133/176 (75.57%), Query Frame = 1
BLAST of CmaCh15G009410 vs. TrEMBL
Match: B9SJ50_RICCO (Homeobox protein, putative OS=Ricinus communis GN=RCOM_0843040 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 4.6e-46 Identity = 114/189 (60.32%), Postives = 138/189 (73.02%), Query Frame = 1
BLAST of CmaCh15G009410 vs. TAIR10
Match: AT2G01430.1 (AT2G01430.1 homeobox-leucine zipper protein 17) HSP 1 Score: 161.8 bits (408), Expect = 4.4e-40 Identity = 92/154 (59.74%), Postives = 113/154 (73.38%), Query Frame = 1
BLAST of CmaCh15G009410 vs. TAIR10
Match: AT1G70920.1 (AT1G70920.1 homeobox-leucine zipper protein 18) HSP 1 Score: 139.0 bits (349), Expect = 3.0e-33 Identity = 86/168 (51.19%), Postives = 105/168 (62.50%), Query Frame = 1
BLAST of CmaCh15G009410 vs. TAIR10
Match: AT5G06710.1 (AT5G06710.1 homeobox from Arabidopsis thaliana) HSP 1 Score: 131.7 bits (330), Expect = 4.9e-31 Identity = 83/177 (46.89%), Postives = 114/177 (64.41%), Query Frame = 1
BLAST of CmaCh15G009410 vs. TAIR10
Match: AT2G44910.1 (AT2G44910.1 homeobox-leucine zipper protein 4) HSP 1 Score: 128.3 bits (321), Expect = 5.4e-30 Identity = 88/192 (45.83%), Postives = 122/192 (63.54%), Query Frame = 1
BLAST of CmaCh15G009410 vs. TAIR10
Match: AT3G60390.1 (AT3G60390.1 homeobox-leucine zipper protein 3) HSP 1 Score: 124.8 bits (312), Expect = 5.9e-29 Identity = 85/190 (44.74%), Postives = 119/190 (62.63%), Query Frame = 1
BLAST of CmaCh15G009410 vs. NCBI nr
Match: gi|778704059|ref|XP_011655468.1| (PREDICTED: homeobox-leucine zipper protein HOX3-like [Cucumis sativus]) HSP 1 Score: 221.9 bits (564), Expect = 1.0e-54 Identity = 135/198 (68.18%), Postives = 152/198 (76.77%), Query Frame = 1
BLAST of CmaCh15G009410 vs. NCBI nr
Match: gi|700196341|gb|KGN51518.1| (hypothetical protein Csa_5G576600 [Cucumis sativus]) HSP 1 Score: 221.9 bits (564), Expect = 1.0e-54 Identity = 135/198 (68.18%), Postives = 152/198 (76.77%), Query Frame = 1
BLAST of CmaCh15G009410 vs. NCBI nr
Match: gi|659072906|ref|XP_008467159.1| (PREDICTED: homeobox-leucine zipper protein HOX3-like [Cucumis melo]) HSP 1 Score: 208.0 bits (528), Expect = 1.5e-50 Identity = 128/199 (64.32%), Postives = 147/199 (73.87%), Query Frame = 1
BLAST of CmaCh15G009410 vs. NCBI nr
Match: gi|698515821|ref|XP_009802790.1| (PREDICTED: homeobox-leucine zipper protein HOX3-like [Nicotiana sylvestris]) HSP 1 Score: 200.3 bits (508), Expect = 3.2e-48 Identity = 111/164 (67.68%), Postives = 131/164 (79.88%), Query Frame = 1
BLAST of CmaCh15G009410 vs. NCBI nr
Match: gi|567911909|ref|XP_006448268.1| (hypothetical protein CICLE_v10016477mg [Citrus clementina]) HSP 1 Score: 195.3 bits (495), Expect = 1.0e-46 Identity = 110/169 (65.09%), Postives = 127/169 (75.15%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |