Csa5G065660 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTCTTCTTCTCTCTTGTTTTTAATTTCCATACCTTGAATTCATTCTTATGGCAATTTTACCCACCAGCACTTCAAGATTGGACCTCTCCATCTCTGTACCAGGCTTCAATTCATTTTCATCAGCACTCCCTCCATCTGGTATACGCTCATTTTCTTAATTAAATTTATGATCGTTCTTCGTTTTCTGTTGATCGGTTACCAATAAAAGCAAATGATTCAATATGCCAAACCCTATCAATAAGCTTTAATTTTTAGGGTTTGGTTTTGATAAAAAAAAAAAAAAAAACCGGAGGATTTGTGTTGAAACCCTGTAATTAGGCTGAGTCTTGGGCAAAAGTGATGGAAAGAAATAATTGATGAGATATTGTGACCTTGTTTGTTATTTGGTTGAGTTTTTTAGTTTAGTGGTGAGTTAACATGTCTCGATACTATGACGTGTTTTTTCTTGCAGTAGGGAGAGATTTGGACATGAACAAAGCTCCAGATGAAGAGGAATGGATGATGGGAACTATGGAAGAAGATGAAGAAATTAATAACAATGGAAGCAATAATCCAAGGAAGAAACTACGTTTAACAAAGGAACAATCACATCTTCTTGAACAAAGCTTTAGACAAAACCATACCTTAAACCCAGTACATTTCTCTAAATTCCCTTTTTTTTTTCTTTCTTCATTTTGTATATTTTATGTGTTTATTTATGTACGTATTCTTTTTTTTTTTTCTTTCTTTTAATTTCTAGAAACAGAAGGAGACTTTGGCAGAAGTGTTGAAGTTGAAACCAAGGCAGATTGAAGTTTGGTTTCAGAATCGAAGGGCCAGGTGGGTTACGTTATTAATTTTCAACTTAATAATGTTTAATTTTTTTTTTCTTCCTATTATCTCACTTTCTTTATTCTCTATTTTGAGGGCTTAATTATATTCCCATGCATATTTCTTTTATTCTTACTTTTAAATAATTACATTTTTTTAAAAAAATTTATGTTTGTTTTCCTACGACATTTTGATAGTTAACTAAACACTTAAAATCACTCTTAAGCTTAAATAATAACTTCTAAAACAAAGTATATAATAAAATAAAGGAATCAGGAGAGTGGGGTAATATTTATAAGCGTCATTTTTTAAAACAAATTAGTTATTCAATAGGACCTAGAAAACTTATTTGACAAATCTCATCATGTTAGAAATAGGTTTGTATAAAAAGATTGGGATGAAAAAATAAACTTTTGCATATCACTTTTTCAAGTTAATCATAAAAGAGTTTGTGAACTATTTTTTCTAAGTATTCTATTATTTTTATTTAAACTCAGTTTGGTAAAGAAAATTGTTTTAAATAAATATTTAAAACTATTTGAAAAAGTTATTTTAAATAGTTAAATTAGCTTTTCAATTTTGTTTCAAATTAAAAACATCCCTAATTCTTAACTCTTCCAACATCCTATTGCATTATTTTCACTAAAAATTTATTTATATGTTATATTTTTTTTTTCTAACCTAACATAGCTGTCTATATATTTCTTTTATCAATAATTTAACTTACTTTTACATATTTATATTTATCATGGATAAGTGCTTTCAAACACAACATAAACCGAGTAGGTTATCTTCATTTCATTTGAGAGTATACATCCAAATCAATTGAGTTGGGTTAAGAGTTGAATTTTAATTTTTTCTCTGAATGCTATGATTAAAAAAATATTATAAATTAAAAAACTAAACTCATACAAACTATTTTTTTATTTCAAAATTTTTTTCTATCATTGGTTTGAAAAGCTCGTGGTAAGATTTTAAAATGAGAATGAAGTAAGTTGAAAAGTTCATATAGTTTTTTAAATTTAATGTGGTTGTATTTAAGAAATATATCAATCATTATAAAAAAATACATCTAATTTTAAAAATTAAAAAACAAAATAATTACAAAACCTAATTGTAAAAGTTTATAGAGGAATGTATGATTATTTGAGGTAATAAGTTATTAATTTTCAAGTGTGGAAATAAATGAAATGTCTTCTAAAGTTTCCCTAGTTGAAAATGAATTAAGAGAGAGAGAGAGAGGTTTGAGTAAAGGAATATGGATATCCAAACCAAAAAAACAAGGTGAAACTATAGAATTATTTTGTCTCTTTTCTAGAAAATAAAAAATTATAAAATAATAATAGTGGAATTATGGGGTAAGATATGCAATGCCACCAAGAGACAATAGGTGAACAAAATTATGAACAAGTAATGATGTGGTTGCCTCCCTATTACTTTTTAGATATATATGTCAATAACACATTGTCTAGGGTTGCTTCCTACGGCCTCGTGTGCCTCTACATTTCCCATATGATATTACCATTAAATTATACTTTACCTTCTCTTTTCTATTGTATCTTTTTCTCTAAGCCATGCATTAATATAAATACATATACATAGTAGGTTCAATCATTTATTTTAACACATTTATGTTCCCCATTAGATGATAATATAAAATTACATTGTTCTATATCTTATAGAACCAACTCATAAATTTTATAGAGCTTTTCTTCTCGACAAACCCTCTACCCGTAACTATTTTGTTGTTTGATTTTTTTTAAAAGAAATACTTATTTAGAATATTGGACTATGATATCATATTAGATAAACTTGAAGTTTCATTTTGACAAAATTGTAGGTCATGTTTATATGATAATTACGGTTTCTAAAATTGAGTAAAATATCTCGGCGAACTTTTCTTTAGACTTTATGATTTTAAAATGGGTGACCGTAATGAGTAGCAATTTTAGGAATAATTATATAAATATACCAAAGCCAATTGTTTATAGACTTCTATTGGTGATAAACTTTTATGTTCTATTAGTGATAGACTAATGTTTCCAATATGGTCTATCACTGATATATTATTCTAACACATTTTGCTATATTTGTAATTTTTAAAATTGTTGTTATGTATCATGATATTTTGAATCTATTTGTTATATTTGCAATTCTCGCTTTAAAAAATTTTCAGCTAGAATTAGGGTTTTAAGTGTTTGATTTTGAAAGATAAGTTATTTTGAAAAAGTTGAAAGGTTTGATAATGACCGAAAACATGTATTTTAAAAGAGATTTATGGAATGAATTTAAATAAAGATAACCTTTGTTAAAACATTTCTCTTTATAACCAAATTCAAATTGATTCCTTCATCTCCATAACATAACTTAGTTTCTCAACATACATGTTTTCCTTTACAGAAGTCATGATATTTGGAAGATATTTATCCCAAAAGTCAGTATTTGGTCCAAATTGAGAATTTCCAAAATTACTATTAGGGCCCACTTTTAAATGTCACTTAAATTATTTTCATTATTGTATTTAGAATTATATTTTGAAATTGAACTCGATTTCAATGTACTTGTTATTCTCACCTTTTTATTTTACCTTTTGCTTAATATTCCAAAACATTTATCTAATTTTCAACAATTTAAAATAATTAGTTATTGGGTATTATCTATACCTTGCTTGATGTAACTTTTCATATTTTTGAATTTTGAATATAAGAATATTCACATGGATATTTTAAACTATATGCTATGAGTACGAATAGTTTGAAGCTGTTTGAACTAATTATTATGTCAGATATTATGGGTACAAAGAACAAGTAAGAAACCAGTTAATTAAAGTTAATGGGTGAAGCAAAACATTGCATGAAAAAGGTAAATTTGTATAACCATTTAATTTGCTTTGATAATAATTAGAATCCAAGAAGACAATAATAATGTTCTTGTCTTTCATGTAAAAGGGCTTCAAATTGCATTTATTTCACTTTCACATTTCTTTTTCTTTTGTCCTTCTTTTTTGTTAGGCACAATTATTGACATATTTTTGTGAAGTCAGATCATATTAATTATTTTCAAAATATACTCCATATTTTTCAAAGTATATCTATATTATTGCATTTCCCTTTTCTATGTATTAATTAAGCATTTATTTGAGTATGAGGTAAAAAGAAAATAAATCAATAATATATCTCAACGTCATGATTAACTGGTTGATTAAACTAATTGCCATAATTATTCTTTTGGGTCAAAGTTGGTTTATTTGGTTTTTGTAGTTTAACAGATCTATTGTAGTTTGAATAGTTTGGTTAAGTCTCTAAATACCCTATAGTTTCTCTGTGCACCTAATTAATTAGTCTTCTTTGGCTCTACTTAAAAAAAAAAGTTTGTCCAAAAATTGATTTTGGATTCCAACTTTTTGTTATAAATTGATTAAAATACATTCTAGAAATGTCTACCAAGCTAATTTAAAGGGTTTGTTTTTTAATTGTAAATTGTGATGTATGTTTGAGTGAGTTTGAAAGAATTAAAAATATTTTTATGGATATTAAATTTAAACATTGACAATTATTATAACACAATTTTAGATAATTATAACATGTTTTTCGTTATCTAAAATCGGTTATCGTTTGATTAAAAGTTTTGTTTTAATTTTTTTTCATGTATTATAAATATGTTTCGTGAAATAAGTCATTTTAATCTGTATCTATTATCTTAGTGTTTTTGTTGGGTAGGATTACACTTAAATTAAAATTTAAACTCTAAAATAATAGAGTTATTATTGTATTTTACTTTTTGTTTATTATGTATTAAATTAGTATTTATTTAGATACAAGTTAGAAAAGAAAATCCTATACATACACACAAATAAACAATGAGATATTATGTCTTAACAGAATGACTCAAATAATTGATTTAAACTTTTACTATAGATAGTTTAGGTTAGAAATATTTAAATATCACTTCGGACATAATTTTGAGGCTAAATATATAGTTTCACTTAGTTGTTCTCCACAGTCTTTGTCACTTTTATTATATTGTAATAGTTTAGTCACTAACCTTTCTCCTAAATAACACATTTTCTTGAAAAGCAATATGCTTAACTTTTATATAAAGTATACGTTAGGGTTGAATGGACTTAGAGTCAAACTTAGTTACAAAAATCAAATATATATATATATATATATATATCTTTTTGTATTGAGAAACATTTTTTTTTTTTACGTATTTAGAAAACATTTTGAAATATATCTTATTATTTTACTATTTGTGTTATGTCTTCGGCAAGGTATCTTGAAAGCCCTAAATTAAGTTCACATTTTGAAGAACTATTTTAACTTGTATCATAGACCTATTTTAAAAAGATTTACAAAGTGTATAATTAAATCATAACAACTAAATTAAAATAAAGTTCACACTTTGAAGATGAACATATTAATAACACAGTGCAACAAATAAAGAAAGGTGTCTATCACATTGAATTGAAATTGAAATTGTTTTTCCTCTTTTAATAACTGAGAACTGAGTTAAAATAATATTAAAAACACATAATTATATTCTAAAATTTCGAATTGAAGGAGTAAAAAAGTAATATTAGAAAGAAAGAAAAAGAAGAATTTCAAGAGTTCTCAAAACTCTCTTATATAAAACATGCAATAGCTAAAAATATATGGTGTAAAAATGTGTAGAGTTTGAAAATGATAGGAACTCTAACGAGGTTAGATGGTATGAAATGATTAGGAGCAAGTTAAAACAAACGGAGATGGAATGTGAGTATCTAAAGAGATGGTTCGGGCTATTAACAGAACAAAACAAGAGACTACAAAAGGAGGTGGAGGAGCTAAGAGCAATGAAGGTGGCGCCCCCGACGGTGATTTCACCGCACAGCTCCGAGCCGCTGCCGGCGTCGAATCTCACAATGTGCCCACGCTGTGAGCGCGTGACAACCACCACCCTCGACAAGACCCGGATCGTCGTTTAA ATGGCAATTTTACCCACCAGCACTTCAAGATTGGACCTCTCCATCTCTGTACCAGGCTTCAATTCATTTTCATCAGCACTCCCTCCATCTGTAGGGAGAGATTTGGACATGAACAAAGCTCCAGATGAAGAGGAATGGATGATGGGAACTATGGAAGAAGATGAAGAAATTAATAACAATGGAAGCAATAATCCAAGGAAGAAACTACGTTTAACAAAGGAACAATCACATCTTCTTGAACAAAGCTTTAGACAAAACCATACCTTAAACCCAAAACAGAAGGAGACTTTGGCAGAAGTGTTGAAGTTGAAACCAAGGCAGATTGAAGTTTGGTTTCAGAATCGAAGGGCCAGGAGCAAGTTAAAACAAACGGAGATGGAATGTGAGTATCTAAAGAGATGGTTCGGGCTATTAACAGAACAAAACAAGAGACTACAAAAGGAGGTGGAGGAGCTAAGAGCAATGAAGGTGGCGCCCCCGACGGTGATTTCACCGCACAGCTCCGAGCCGCTGCCGGCGTCGAATCTCACAATGTGCCCACGCTGTGAGCGCGTGACAACCACCACCCTCGACAAGACCCGGATCGTCGTTTAA ATGGCAATTTTACCCACCAGCACTTCAAGATTGGACCTCTCCATCTCTGTACCAGGCTTCAATTCATTTTCATCAGCACTCCCTCCATCTGTAGGGAGAGATTTGGACATGAACAAAGCTCCAGATGAAGAGGAATGGATGATGGGAACTATGGAAGAAGATGAAGAAATTAATAACAATGGAAGCAATAATCCAAGGAAGAAACTACGTTTAACAAAGGAACAATCACATCTTCTTGAACAAAGCTTTAGACAAAACCATACCTTAAACCCAAAACAGAAGGAGACTTTGGCAGAAGTGTTGAAGTTGAAACCAAGGCAGATTGAAGTTTGGTTTCAGAATCGAAGGGCCAGGAGCAAGTTAAAACAAACGGAGATGGAATGTGAGTATCTAAAGAGATGGTTCGGGCTATTAACAGAACAAAACAAGAGACTACAAAAGGAGGTGGAGGAGCTAAGAGCAATGAAGGTGGCGCCCCCGACGGTGATTTCACCGCACAGCTCCGAGCCGCTGCCGGCGTCGAATCTCACAATGTGCCCACGCTGTGAGCGCGTGACAACCACCACCCTCGACAAGACCCGGATCGTCGTTTAA MAILPTSTSRLDLSISVPGFNSFSSALPPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGSNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLKLKPRQIEVWFQNRRARSKLKQTEMECEYLKRWFGLLTEQNKRLQKEVEELRAMKVAPPTVISPHSSEPLPASNLTMCPRCERVTTTTLDKTRIVV*
BLAST of Csa5G065660 vs. Swiss-Prot
Match: HOX3_ORYSI (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica GN=HOX3 PE=1 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 3.3e-61 Identity = 125/196 (63.78%), Postives = 149/196 (76.02%), Query Frame = 1
BLAST of Csa5G065660 vs. Swiss-Prot
Match: HOX3_ORYSJ (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=1 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 3.3e-61 Identity = 125/196 (63.78%), Postives = 149/196 (76.02%), Query Frame = 1
BLAST of Csa5G065660 vs. Swiss-Prot
Match: ATB17_ARATH (Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana GN=ATHB-17 PE=2 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 1.5e-58 Identity = 127/200 (63.50%), Postives = 145/200 (72.50%), Query Frame = 1
BLAST of Csa5G065660 vs. Swiss-Prot
Match: ATHBX_ARATH (Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana GN=ATHB-X PE=2 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 8.1e-52 Identity = 112/189 (59.26%), Postives = 127/189 (67.20%), Query Frame = 1
BLAST of Csa5G065660 vs. Swiss-Prot
Match: HAT14_ARATH (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana GN=HAT14 PE=2 SV=3) HSP 1 Score: 164.1 bits (414), Expect = 1.6e-39 Identity = 93/183 (50.82%), Postives = 118/183 (64.48%), Query Frame = 1
BLAST of Csa5G065660 vs. TrEMBL
Match: A0A0A0KJE2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G065660 PE=4 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 9.4e-108 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 1
BLAST of Csa5G065660 vs. TrEMBL
Match: A0A0S3R2Y8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G269700 PE=4 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 1.4e-74 Identity = 141/188 (75.00%), Postives = 163/188 (86.70%), Query Frame = 1
BLAST of Csa5G065660 vs. TrEMBL
Match: A0A0B0MRC6_GOSAR (Homeobox-leucine zipper HOX3 OS=Gossypium arboreum GN=F383_25892 PE=4 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 5.2e-74 Identity = 147/196 (75.00%), Postives = 164/196 (83.67%), Query Frame = 1
BLAST of Csa5G065660 vs. TrEMBL
Match: A0A061EF99_THECC (Homeobox-leucine zipper protein HOX3 OS=Theobroma cacao GN=TCM_010868 PE=4 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 2.0e-73 Identity = 147/201 (73.13%), Postives = 165/201 (82.09%), Query Frame = 1
BLAST of Csa5G065660 vs. TrEMBL
Match: I1KM50_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G218000 PE=4 SV=2) HSP 1 Score: 283.1 bits (723), Expect = 2.6e-73 Identity = 139/188 (73.94%), Postives = 162/188 (86.17%), Query Frame = 1
BLAST of Csa5G065660 vs. TAIR10
Match: AT2G01430.1 (AT2G01430.1 homeobox-leucine zipper protein 17) HSP 1 Score: 227.3 bits (578), Expect = 8.6e-60 Identity = 127/200 (63.50%), Postives = 145/200 (72.50%), Query Frame = 1
BLAST of Csa5G065660 vs. TAIR10
Match: AT1G70920.1 (AT1G70920.1 homeobox-leucine zipper protein 18) HSP 1 Score: 204.9 bits (520), Expect = 4.5e-53 Identity = 112/189 (59.26%), Postives = 127/189 (67.20%), Query Frame = 1
BLAST of Csa5G065660 vs. TAIR10
Match: AT5G06710.1 (AT5G06710.1 homeobox from Arabidopsis thaliana) HSP 1 Score: 164.1 bits (414), Expect = 8.9e-41 Identity = 93/183 (50.82%), Postives = 118/183 (64.48%), Query Frame = 1
BLAST of Csa5G065660 vs. TAIR10
Match: AT3G60390.1 (AT3G60390.1 homeobox-leucine zipper protein 3) HSP 1 Score: 157.5 bits (397), Expect = 8.3e-39 Identity = 78/142 (54.93%), Postives = 105/142 (73.94%), Query Frame = 1
BLAST of Csa5G065660 vs. TAIR10
Match: AT2G44910.1 (AT2G44910.1 homeobox-leucine zipper protein 4) HSP 1 Score: 154.5 bits (389), Expect = 7.0e-38 Identity = 91/197 (46.19%), Postives = 125/197 (63.45%), Query Frame = 1
BLAST of Csa5G065660 vs. NCBI nr
Match: gi|778698284|ref|XP_011654500.1| (PREDICTED: homeobox-leucine zipper protein HOX3-like isoform X1 [Cucumis sativus]) HSP 1 Score: 397.5 bits (1020), Expect = 1.4e-107 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 1
BLAST of Csa5G065660 vs. NCBI nr
Match: gi|778698287|ref|XP_011654501.1| (PREDICTED: homeobox-leucine zipper protein HOX3-like isoform X2 [Cucumis sativus]) HSP 1 Score: 391.3 bits (1004), Expect = 9.7e-106 Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 1
BLAST of Csa5G065660 vs. NCBI nr
Match: gi|659109472|ref|XP_008454736.1| (PREDICTED: homeobox-leucine zipper protein HOX3-like isoform X1 [Cucumis melo]) HSP 1 Score: 382.1 bits (980), Expect = 5.9e-103 Identity = 188/197 (95.43%), Postives = 192/197 (97.46%), Query Frame = 1
BLAST of Csa5G065660 vs. NCBI nr
Match: gi|659109474|ref|XP_008454737.1| (PREDICTED: homeobox-leucine zipper protein HOX3-like isoform X2 [Cucumis melo]) HSP 1 Score: 375.9 bits (964), Expect = 4.2e-101 Identity = 187/197 (94.92%), Postives = 191/197 (96.95%), Query Frame = 1
BLAST of Csa5G065660 vs. NCBI nr
Match: gi|965658499|dbj|BAT74918.1| (hypothetical protein VIGAN_01269700 [Vigna angularis var. angularis]) HSP 1 Score: 287.3 bits (734), Expect = 2.0e-74 Identity = 141/188 (75.00%), Postives = 163/188 (86.70%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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