Cp4.1LG01g02410 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g02410
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	PRKR-interacting 1
Location	Cp4.1LG01 : 2447179 .. 2449889 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATGGACCTTTTGTTCAACACAAAAACTGTCAGTTTAATCGAATTCGTAGGGCGCGGAACGGAGGCGGCGAAAATCCACAGCTCTTCGACGACCGACAAAGATAAAGAATCGGGAGTTCACTGGAAGGTCGAAGAAACATTGCTGTTAGGGTAACAGGAAGAGATTTTTGTTGATTGTTGGAGGAAATTTTCACAATTAGGGTTTTAGGGTTTCTGGAATATCATGTCAACCGGCAAGCTGAAGGATGGGGACCGTCGGCTGGTGATTCCGATGCCCCCCAAACCGAAATCTGATACCCAGTTGGCGACAACCGAGACGAACGCGCTTGTGGCATATACGCCGCCGGTGAAGGAGGAGGATGAGGATTTGGAGGTCAAGCTCCGAAGAATCATCGATAATGTTCCTGTTCGTGTCAGCAACACGTCTGGAAGCTCTGCTGGTTCTGGTTCCGGTGATTTTCACCAGGTACTTGAGTGATTTATGTTGTTTTATATTGCGTAAATTTTATTAGTGACTTCTGTCTGCGGTTTATTCTCTCGTGGGCGTGTTTTCATGATGAATGGATGTAAAATTGTACCATTGCATTACTGGGATTGATTAGCAACGAGTGTGATTCCTATCTTAGGTCTTATGATATGAAACAATCTGGTTTCGGTACATTACAGGTTTTTAAATTCTTGCGACTGTTAGCTGGTAATGAGTGGAAGAACTGATTATTGGGGGAATTAGGCTGGGTGTGAACAACAATATTTCCCTTACCAAAGGTGTGAAAATCCAGACTATTATTGAATAAGGAAGATGCCCCTTTCTTTGATGGAAATTTGAGTAAACAAAATTCTTAGATTGGGTTTAGCTCGTGGATGATCTTTTTTTTTAATATATGGACGAAGGGGAGCCATAGGGTTGGTGGGATGATTACAAAAATGTTCATAAGCGAGTTGGAAAAGGTAGAATCCAAACCTGGCAAAAAGAGATAACGTACCTTGTAGGAGTACAACTTTTAGATTTATGAGATTGGATGTTTGTAGATAATTGTAAAATTAGAACACTTAACTAGCTTATTGTGGTGGATTTCGAATTGTGTATTTGGCTCACCGTCGGATACAGGATAGTCGGTGTTCTTTTTAACTGGACGAAGCTTTTTTCATTTACCATCTTAAAATGTTGTTATTATGCGAGTGAAATATCATATATTTGATTAAAATGTTGTTATTAATCGTATGCTCACGCGGGAGTAGCATAGCAACTTAGCATTAACTATATGCTAGTTGGTTGGTACTTTCTTTACGATCAGATAATGTCTATGCTGAAGCTAAGACTTACTGGCTTCACCTTATAGATTTTCACAGTGAAGAAAGTTTAAAATTATGGTGTGCTAGTCTGAGATTCAAAGCTGACTGCTGCCAAGCAGAATTTGATTTATTGGAGAGTTTTAAATGGATTGGAGCGATGATTTGTTCCACGCACTCGAATTTACGTATGACCTATCGAAGTTAGGTCGTTGTGGATACCATTAGGAAGTAATGATCGTGGAGTAGCAGTAGAGGGTTGACAAGTACTCTGTTTGCAAGCAATGCTCTGAAATCTTAGCTCGTGGAAATGCATCGCTTGCTTTTGTTGGTTTTTGGTGTCATCTAAGAAATGTTTTGATGTCATTTAATAGAAGTGAAAGGACGTGGTTTATAAATATACTGTTCGACGTGAAAGAAATTCTTTTTAGTCTGGTGTTAAATGGGTCTTTCATATTTTGAATCTTGATGTAGTTAAGAAAGGTAATGTATTACAATGGGGAATTGAAAGTTTTTACCTACTCAAACATCATCTGATGATTCTTATATGTGTTTAGGAAAGAAAGTCTCCACTTGTGTTGTTAAGCCTACAATTTTCACTTCAGATTGTATATGCATCAGACCTACCTTTTTGTTTGATCTATTTATTTTCCTCTCCATCCTTGATAATGAGCAACTGTTCGCGAGTTTGTGGAGTCTGTCTCGATCGTTGAATATATATACTAATACGTGCCTGCCCATCAAATTTTCAAATGACAGTATAGGCAAATGAGGCGAAAAGAACAAGACAGACTTGCTAGAATGGACGTTGATTATCAGAAAAAGAAAGAAATAGCCGAATTCAATATGCGAAGGGAAGAACGGTTGAAAGCTGCCGAGGAACGCACTTCAAAGAAGCGACTAAAGCGTCAAAAGAAAAAGCAAAGAAGAAAAGAAAAGAAGAGCAAGTTGAATTCAGGCGGAGGAGATGAGAATCAGAAAGACGCATCCTCTGGCGATGAAGGGGATACCGATAATGGCGAGGATGAAGCAACATGACTCGTTATTCTCCACCCGGAATCGAAGTTTGAACTCTTAGCCTCGAGCTTTCAGACGAGCCATCTAACCAGAGACAGCTACCAGTACCTGGAATCTGGCTTTTGTGTTTTTATTGCAGGTGGGATTGGAAGAATGTTGCATTTGAATGAATACACAATTCTCCCATCTTCCCACAGGACCTCTATCTTTCTCTCAATTGCATGGCGCTGAAATGTGTTAGCAGAATATCTATAACATTATTACATGTAGAACAGATTGACATAATATTAGTCGAGTCCGAGGGATACTCATGATTGTGTTATAATGATTCGTTGCTTATGATATATGAACAGAGGGGACGTTGATCTACGATCAGTCAACCCTGACATGCTCGTAGAAACA

mRNA sequence

AAAATGGACCTTTTGTTCAACACAAAAACTGTCAGTTTAATCGAATTCGTAGGGCGCGGAACGGAGGCGGCGAAAATCCACAGCTCTTCGACGACCGACAAAGATAAAGAATCGGGAGTTCACTGGAAGGTCGAAGAAACATTGCTGTTAGGGTAACAGGAAGAGATTTTTGTTGATTGTTGGAGGAAATTTTCACAATTAGGGTTTTAGGGTTTCTGGAATATCATGTCAACCGGCAAGCTGAAGGATGGGGACCGTCGGCTGGTGATTCCGATGCCCCCCAAACCGAAATCTGATACCCAGTTGGCGACAACCGAGACGAACGCGCTTGTGGCATATACGCCGCCGGTGAAGGAGGAGGATGAGGATTTGGAGGTCAAGCTCCGAAGAATCATCGATAATGTTCCTGTTCGTGTCAGCAACACGTCTGGAAGCTCTGCTGGTTCTGGTTCCGGTGATTTTCACCAGTATAGGCAAATGAGGCGAAAAGAACAAGACAGACTTGCTAGAATGGACGTTGATTATCAGAAAAAGAAAGAAATAGCCGAATTCAATATGCGAAGGGAAGAACGGTTGAAAGCTGCCGAGGAACGCACTTCAAAGAAGCGACTAAAGCGTCAAAAGAAAAAGCAAAGAAGAAAAGAAAAGAAGAGCAAGTTGAATTCAGGCGGAGGAGATGAGAATCAGAAAGACGCATCCTCTGGCGATGAAGGGGATACCGATAATGGCGAGGATGAAGCAACATGACTCGTTATTCTCCACCCGGAATCGAAGTTTGAACTCTTAGCCTCGAGCTTTCAGACGAGCCATCTAACCAGAGACAGCTACCAGTACCTGGAATCTGGCTTTTGTGTTTTTATTGCAGGTGGGATTGGAAGAATGTTGCATTTGAATGAATACACAATTCTCCCATCTTCCCACAGGACCTCTATCTTTCTCTCAATTGCATGGCGCTGAAATGTGTTAGCAGAATATCTATAACATTATTACATGTAGAACAGATTGACATAATATTAGTCGAGTCCGAGGGATACTCATGATTGTGTTATAATGATTCGTTGCTTATGATATATGAACAGAGGGGACGTTGATCTACGATCAGTCAACCCTGACATGCTCGTAGAAACA

Coding sequence (CDS)

ATGTCAACCGGCAAGCTGAAGGATGGGGACCGTCGGCTGGTGATTCCGATGCCCCCCAAACCGAAATCTGATACCCAGTTGGCGACAACCGAGACGAACGCGCTTGTGGCATATACGCCGCCGGTGAAGGAGGAGGATGAGGATTTGGAGGTCAAGCTCCGAAGAATCATCGATAATGTTCCTGTTCGTGTCAGCAACACGTCTGGAAGCTCTGCTGGTTCTGGTTCCGGTGATTTTCACCAGTATAGGCAAATGAGGCGAAAAGAACAAGACAGACTTGCTAGAATGGACGTTGATTATCAGAAAAAGAAAGAAATAGCCGAATTCAATATGCGAAGGGAAGAACGGTTGAAAGCTGCCGAGGAACGCACTTCAAAGAAGCGACTAAAGCGTCAAAAGAAAAAGCAAAGAAGAAAAGAAAAGAAGAGCAAGTTGAATTCAGGCGGAGGAGATGAGAATCAGAAAGACGCATCCTCTGGCGATGAAGGGGATACCGATAATGGCGAGGATGAAGCAACATGA

Protein sequence

MSTGKLKDGDRRLVIPMPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAAEERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEAT

Homology

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BLAST of Cp4.1LG01g02410 vs. Swiss-Prot
Match: PKRI1_BOVIN (PRKR-interacting protein 1 OS=Bos taurus GN=PRKRIP1 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-07
Identity = 67/179 (37.43%), Postives = 89/179 (49.72%), Query Frame = 1


Query: 18  PPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK + Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQALIIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMSEWAPRP 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E    A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLEAEFQKRLERNKIA 130

Query: 138 AEERTSKKRLKRQKKKQRR-KEKKSKL----NSGGGDENQKDASSGDE---GDTDNGED 171
           AEE+T+K+R KRQK K+++   KK KL     S    E Q+  SSG E   G  D  ED
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQSEASSETQEQPSSGSEEASGTEDEEED 178

[Close]

BLAST of Cp4.1LG01g02410 vs. Swiss-Prot
Match: PKRI1_PONAB (PRKR-interacting protein 1 OS=Pongo abelii GN=PRKRIP1 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-06
Identity = 63/177 (35.59%), Postives = 89/177 (50.28%), Query Frame = 1


Query: 18  PPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK + Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQTLVIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMSEWAPRP 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E+   A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIA 130

Query: 138 AEERTSKKRLKRQKKKQRR-KEKKSKL----NSGGGDENQKDASSGDEGDTDNGEDE 172
           AEE+T+K+R KRQK K+++   KK KL      G G   ++ +SS  E      E+E
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQEGPGQPKEQGSSSSAEASGTEEEEE 176

[Close]

BLAST of Cp4.1LG01g02410 vs. Swiss-Prot
Match: PKRI1_MOUSE (PRKR-interacting protein 1 OS=Mus musculus GN=Prkrip1 PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-06
Identity = 64/178 (35.96%), Postives = 89/178 (50.00%), Query Frame = 1


Query: 18  PPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK + Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQTLVIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMNEWAPRA 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E+   A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIA 130

Query: 138 AEERTSKKRLKRQKKKQRR-KEKKSKLNSGGGDE-----NQKDASSGDEGDTDNGEDE 172
           AEE+T+K+R KRQK K+++   KK KL      E      ++ ASS DE      E+E
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQKEEPSQCQEQHASSSDEASETEEEEE 177

[Close]

BLAST of Cp4.1LG01g02410 vs. Swiss-Prot
Match: PKRI1_HUMAN (PRKR-interacting protein 1 OS=Homo sapiens GN=PRKRIP1 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-06
Identity = 63/177 (35.59%), Postives = 89/177 (50.28%), Query Frame = 1


Query: 18  PPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK + Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQTLVIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMSEWAPRP 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E+   A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIA 130

Query: 138 AEERTSKKRLKRQKKKQRR-KEKKSKL----NSGGGDENQKDASSGDEGDTDNGEDE 172
           AEE+T+K+R KRQK K+++   KK KL      G G   ++ +SS  E      E+E
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQEGPGQPKEQGSSSSAEASGTEEEEE 176

[Close]

BLAST of Cp4.1LG01g02410 vs. TrEMBL
Match: A0A0A0L705_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G199600 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 3.0e-73
Identity = 161/173 (93.06%), Postives = 165/173 (95.38%), Query Frame = 1


Query: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDG+RRLVIPMPPKPK DTQLAT E+NALV YTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREER+KAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120

Query: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEAT 174
           EERTSKKRLKRQKKKQRRKEK+SKLNS G DENQKD SS DEGDTD GEDEAT
Sbjct: 121 EERTSKKRLKRQKKKQRRKEKRSKLNS-GEDENQKDESSDDEGDTDKGEDEAT 172

[Close]

BLAST of Cp4.1LG01g02410 vs. TrEMBL
Match: A0A067LM79_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15460 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 6.0e-50
Identity = 127/180 (70.56%), Postives = 150/180 (83.33%), Query Frame = 1


Query: 1   MSTGKLKDGDRRLVIP-------MPPKPKSDTQLATTETNALVAYTPPV-KEEDEDLEVK 60
           MSTG+ KD D ++V+        +PP+P +    A T + ALV Y+ PV KEE+EDLEVK
Sbjct: 1   MSTGRPKDSDLQVVVTPDKHVSGLPPRPPA----AGTASTALVEYSAPVFKEEEEDLEVK 60

Query: 61  LRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMR 120
           LRRII+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMD DYQK+KE+AEF+MR
Sbjct: 61  LRRIIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDADYQKRKELAEFSMR 120

Query: 121 REERLKAAEERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEA 173
           REERLKAAEERT+KKRLKRQKKKQ++KEKK KLN+ GG+E+QK+ SS D+GD+D GE  A
Sbjct: 121 REERLKAAEERTAKKRLKRQKKKQKKKEKKVKLNA-GGEEHQKEESSDDDGDSDTGEPAA 175

[Close]

BLAST of Cp4.1LG01g02410 vs. TrEMBL
Match: B9RY95_RICCO (Expressed protein, putative OS=Ricinus communis GN=RCOM_0811390 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 7.8e-50
Identity = 124/178 (69.66%), Postives = 148/178 (83.15%), Query Frame = 1


Query: 1   MSTGKLKDGDRRLVIP-------MPPKPKSDTQLATTETNALVAYTPPV-KEEDEDLEVK 60
           MSTG+ +D D +L++        +PP+P        T + ALV YT P+ KEE+EDLEVK
Sbjct: 1   MSTGRPEDNDLQLMVQPEKPKPALPPRPLVAAMGTGTGSTALVEYTAPMLKEEEEDLEVK 60

Query: 61  LRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMR 120
           LRRII+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARM+VDYQK+KE+AEFNMR
Sbjct: 61  LRRIIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQKRKELAEFNMR 120

Query: 121 REERLKAAEERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGED 171
           REE+LKAAEERT+KKRLKRQ+KKQR+KEKK K+N+ GG+E QK  SS DEGD+D+GE+
Sbjct: 121 REEKLKAAEERTAKKRLKRQRKKQRKKEKKMKVNA-GGEEQQKHESSDDEGDSDDGEE 177

[Close]

BLAST of Cp4.1LG01g02410 vs. TrEMBL
Match: A0A0B0P818_GOSAR (PRKR-interacting 1 OS=Gossypium arboreum GN=F383_07187 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-49
Identity = 128/178 (71.91%), Postives = 145/178 (81.46%), Query Frame = 1


Query: 1   MSTGKLKDGDRRLVIP-----MPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRR 60
           MSTG+ KDGD +L +      +PP+P S T  A  E        P  KEE+EDLEVKLRR
Sbjct: 1   MSTGRPKDGDTQLAVVEPKSGLPPRPPSTTSTAIVEYEK-----PAFKEEEEDLEVKLRR 60

Query: 61  IIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREE 120
           II+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQK+KEIAEFNMRREE
Sbjct: 61  IIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKRKEIAEFNMRREE 120

Query: 121 RLKAAEERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEAT 174
           RLKAAEERT+KKRLKRQKKKQR+KEKK KL++ GG EN+K+ SS DE D+++  DEAT
Sbjct: 121 RLKAAEERTAKKRLKRQKKKQRKKEKKMKLSAEGG-ENKKEESSDDEADSEH--DEAT 170

[Close]

BLAST of Cp4.1LG01g02410 vs. TrEMBL
Match: A0A0D2RKD2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G235000 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 8.7e-49
Identity = 127/178 (71.35%), Postives = 144/178 (80.90%), Query Frame = 1


Query: 1   MSTGKLKDGDRRLVIP-----MPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRR 60
           MSTG+ KDGD +L +      +PP+P S T  A  E        P  KEE+EDLEVKLRR
Sbjct: 1   MSTGRPKDGDTQLAVVEPKSGLPPRPPSTTSTAIVEYEK-----PAFKEEEEDLEVKLRR 60

Query: 61  IIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREE 120
           II+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQK+KEIAEFNMRREE
Sbjct: 61  IIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKRKEIAEFNMRREE 120

Query: 121 RLKAAEERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEAT 174
           RLKAAEERT+KKRLKRQKKKQR+KEKK K ++ GG EN+K+ SS DE D+++  DEAT
Sbjct: 121 RLKAAEERTAKKRLKRQKKKQRKKEKKMKSSAEGG-ENKKEESSDDEADSEH--DEAT 170

[Close]

BLAST of Cp4.1LG01g02410 vs. TAIR10
Match: AT2G15270.1 (AT2G15270.1 unknown protein)

HSP 1 Score: 160.2 bits (404), Expect = 1.1e-39
Identity = 108/180 (60.00%), Postives = 133/180 (73.89%), Query Frame = 1


Query: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTE--------TNALVAYTPPVK-EEDEDLEV 60
           MS+GK K GD RLV+       + T  A  E        ++++V Y PPV  E++EDLEV
Sbjct: 1   MSSGKPKQGDTRLVVA------ATTASALMEAKKADHGGSSSIVEYKPPVMLEDEEDLEV 60

Query: 61  KLRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNM 120
           KLRRI++NVPVRVSNTSGSSAGSGSGDFHQYRQMRR+EQDRL RMD+DY K+ ++AEF +
Sbjct: 61  KLRRILENVPVRVSNTSGSSAGSGSGDFHQYRQMRRREQDRLTRMDIDYNKRLKMAEFTI 120

Query: 121 RREERLKAAEERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDE 172
           RREE+ KAAEE+TSKKRLKRQKKKQ+++EKK K N+   +E  K    G E  +D GEDE
Sbjct: 121 RREEKQKAAEEKTSKKRLKRQKKKQKKQEKKQKPNT--TEEEVKQPRVG-EISSDEGEDE 171

[Close]

BLAST of Cp4.1LG01g02410 vs. NCBI nr
Match: gi|778680024|ref|XP_011651236.1| (PREDICTED: PRKR-interacting protein 1 [Cucumis sativus])

HSP 1 Score: 282.7 bits (722), Expect = 4.2e-73
Identity = 161/173 (93.06%), Postives = 165/173 (95.38%), Query Frame = 1


Query: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDG+RRLVIPMPPKPK DTQLAT E+NALV YTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREER+KAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120

Query: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEAT 174
           EERTSKKRLKRQKKKQRRKEK+SKLNS G DENQKD SS DEGDTD GEDEAT
Sbjct: 121 EERTSKKRLKRQKKKQRRKEKRSKLNS-GEDENQKDESSDDEGDTDKGEDEAT 172

[Close]

BLAST of Cp4.1LG01g02410 vs. NCBI nr
Match: gi|659112331|ref|XP_008456169.1| (PREDICTED: PRKR-interacting protein 1 [Cucumis melo])

HSP 1 Score: 279.6 bits (714), Expect = 3.6e-72
Identity = 158/173 (91.33%), Postives = 166/173 (95.95%), Query Frame = 1


Query: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDG+RRLVIPMPPKPK +TQLATTE+NALV YTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREER+KAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120

Query: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEAT 174
           EERT+KKRLKRQKKKQRRKEK+SK+NS G DENQK+ SS DEGDTD GEDEAT
Sbjct: 121 EERTAKKRLKRQKKKQRRKEKRSKMNS-GEDENQKEESSDDEGDTDKGEDEAT 172

[Close]

BLAST of Cp4.1LG01g02410 vs. NCBI nr
Match: gi|802540316|ref|XP_012075843.1| (PREDICTED: PRKR-interacting protein 1 [Jatropha curcas])

HSP 1 Score: 205.3 bits (521), Expect = 8.6e-50
Identity = 127/180 (70.56%), Postives = 150/180 (83.33%), Query Frame = 1


Query: 1   MSTGKLKDGDRRLVIP-------MPPKPKSDTQLATTETNALVAYTPPV-KEEDEDLEVK 60
           MSTG+ KD D ++V+        +PP+P +    A T + ALV Y+ PV KEE+EDLEVK
Sbjct: 1   MSTGRPKDSDLQVVVTPDKHVSGLPPRPPA----AGTASTALVEYSAPVFKEEEEDLEVK 60

Query: 61  LRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMR 120
           LRRII+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMD DYQK+KE+AEF+MR
Sbjct: 61  LRRIIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDADYQKRKELAEFSMR 120

Query: 121 REERLKAAEERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEA 173
           REERLKAAEERT+KKRLKRQKKKQ++KEKK KLN+ GG+E+QK+ SS D+GD+D GE  A
Sbjct: 121 REERLKAAEERTAKKRLKRQKKKQKKKEKKVKLNA-GGEEHQKEESSDDDGDSDTGEPAA 175

[Close]

BLAST of Cp4.1LG01g02410 vs. NCBI nr
Match: gi|255555285|ref|XP_002518679.1| (PREDICTED: PRKR-interacting protein 1 [Ricinus communis])

HSP 1 Score: 204.9 bits (520), Expect = 1.1e-49
Identity = 124/178 (69.66%), Postives = 148/178 (83.15%), Query Frame = 1


Query: 1   MSTGKLKDGDRRLVIP-------MPPKPKSDTQLATTETNALVAYTPPV-KEEDEDLEVK 60
           MSTG+ +D D +L++        +PP+P        T + ALV YT P+ KEE+EDLEVK
Sbjct: 1   MSTGRPEDNDLQLMVQPEKPKPALPPRPLVAAMGTGTGSTALVEYTAPMLKEEEEDLEVK 60

Query: 61  LRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMR 120
           LRRII+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARM+VDYQK+KE+AEFNMR
Sbjct: 61  LRRIIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQKRKELAEFNMR 120

Query: 121 REERLKAAEERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGED 171
           REE+LKAAEERT+KKRLKRQ+KKQR+KEKK K+N+ GG+E QK  SS DEGD+D+GE+
Sbjct: 121 REEKLKAAEERTAKKRLKRQRKKQRKKEKKMKVNA-GGEEQQKHESSDDEGDSDDGEE 177

[Close]

BLAST of Cp4.1LG01g02410 vs. NCBI nr
Match: gi|728841762|gb|KHG21205.1| (PRKR-interacting 1 [Gossypium arboreum])

HSP 1 Score: 203.8 bits (517), Expect = 2.5e-49
Identity = 128/178 (71.91%), Postives = 145/178 (81.46%), Query Frame = 1


Query: 1   MSTGKLKDGDRRLVIP-----MPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRR 60
           MSTG+ KDGD +L +      +PP+P S T  A  E        P  KEE+EDLEVKLRR
Sbjct: 1   MSTGRPKDGDTQLAVVEPKSGLPPRPPSTTSTAIVEYEK-----PAFKEEEEDLEVKLRR 60

Query: 61  IIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREE 120
           II+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQK+KEIAEFNMRREE
Sbjct: 61  IIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKRKEIAEFNMRREE 120

Query: 121 RLKAAEERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEAT 174
           RLKAAEERT+KKRLKRQKKKQR+KEKK KL++ GG EN+K+ SS DE D+++  DEAT
Sbjct: 121 RLKAAEERTAKKRLKRQKKKQRKKEKKMKLSAEGG-ENKKEESSDDEADSEH--DEAT 170

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g02410 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PKRI1_BOVIN	2.4e-07	37.43	PRKR-interacting protein 1 OS=Bos taurus GN=PRKRIP1 PE=2 SV=1	[more]
PKRI1_PONAB	1.2e-06	35.59	PRKR-interacting protein 1 OS=Pongo abelii GN=PRKRIP1 PE=2 SV=1	[more]
PKRI1_MOUSE	1.2e-06	35.96	PRKR-interacting protein 1 OS=Mus musculus GN=Prkrip1 PE=1 SV=2	[more]
PKRI1_HUMAN	1.2e-06	35.59	PRKR-interacting protein 1 OS=Homo sapiens GN=PRKRIP1 PE=1 SV=1	[more]

BLAST of Cp4.1LG01g02410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L705_CUCSA	3.0e-73	93.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G199600 PE=4 SV=1	[more]
A0A067LM79_JATCU	6.0e-50	70.56	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15460 PE=4 SV=1	[more]
B9RY95_RICCO	7.8e-50	69.66	Expressed protein, putative OS=Ricinus communis GN=RCOM_0811390 PE=4 SV=1	[more]
A0A0B0P818_GOSAR	1.7e-49	71.91	PRKR-interacting 1 OS=Gossypium arboreum GN=F383_07187 PE=4 SV=1	[more]
A0A0D2RKD2_GOSRA	8.7e-49	71.35	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G235000 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g02410 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G15270.1	1.1e-39	60.00	unknown protein	[more]

BLAST of Cp4.1LG01g02410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680024\|ref\|XP_011651236.1\|	4.2e-73	93.06	PREDICTED: PRKR-interacting protein 1 [Cucumis sativus]	[more]
gi\|659112331\|ref\|XP_008456169.1\|	3.6e-72	91.33	PREDICTED: PRKR-interacting protein 1 [Cucumis melo]	[more]
gi\|802540316\|ref\|XP_012075843.1\|	8.6e-50	70.56	PREDICTED: PRKR-interacting protein 1 [Jatropha curcas]	[more]
gi\|255555285\|ref\|XP_002518679.1\|	1.1e-49	69.66	PREDICTED: PRKR-interacting protein 1 [Ricinus communis]	[more]
gi\|728841762\|gb\|KHG21205.1\|	2.5e-49	71.91	PRKR-interacting 1 [Gossypium arboreum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009548	DUF1168

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006469	negative regulation of protein kinase activity
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003725	double-stranded RNA binding
molecular_function	GO:0019901	protein kinase binding
molecular_function	GO:0004860	protein kinase inhibitor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g02410.1	Cp4.1LG01g02410.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009548	Protein of unknown function DUF1168	PANTHER	PTHR13507	UNCHARACTERIZED	coord: 2..171 score: 4.2
IPR009548	Protein of unknown function DUF1168	PFAM	PF06658	DUF1168	coord: 54..170 score: 1.1
None	No IPR available	unknown	Coil	Coil	coord: 112..146 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g02410	Cucsa.244640	Cucumber (Gy14) v1	cgycpeB0654
Cp4.1LG01g02410	CmaCh04G004720	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g02410	CmoCh04G005060	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g02410	Cla013097	Watermelon (97103) v1	cpewmB433
Cp4.1LG01g02410	Csa3G199600	Cucumber (Chinese Long) v2	cpecuB389
Cp4.1LG01g02410	MELO3C019546	Melon (DHL92) v3.5.1	cpemeB412
Cp4.1LG01g02410	ClCG05G010280	Watermelon (Charleston Gray)	cpewcgB394
Cp4.1LG01g02410	CSPI03G18150	Wild cucumber (PI 183967)	cpecpiB388
Cp4.1LG01g02410	Lsi05G002370	Bottle gourd (USVL1VR-Ls)	cpelsiB369
Cp4.1LG01g02410	MELO3C019546.2	Melon (DHL92) v3.6.1	cpemedB481
Cp4.1LG01g02410	CsaV3_3G018210	Cucumber (Chinese Long) v3	cpecucB0484
Cp4.1LG01g02410	Bhi01G001281	Wax gourd	cpewgoB0517
Cp4.1LG01g02410	CsGy3G018040	Cucumber (Gy14) v2	cgybcpeB362
Cp4.1LG01g02410	Carg08143	Silver-seed gourd	carcpeB0527

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g02410	Cucurbita pepo (Zucchini)	cpecpeB234
Cp4.1LG01g02410	Cucurbita pepo (Zucchini)	cpecpeB400
Cp4.1LG01g02410	Cucumber (Gy14) v1	cgycpeB0218
Cp4.1LG01g02410	Cucumber (Gy14) v1	cgycpeB0599
Cp4.1LG01g02410	Cucurbita maxima (Rimu)	cmacpeB136
Cp4.1LG01g02410	Cucurbita maxima (Rimu)	cmacpeB351
Cp4.1LG01g02410	Cucurbita moschata (Rifu)	cmocpeB114
Cp4.1LG01g02410	Cucurbita moschata (Rifu)	cmocpeB311
Cp4.1LG01g02410	Cucurbita moschata (Rifu)	cmocpeB815
Cp4.1LG01g02410	Wild cucumber (PI 183967)	cpecpiB470
Cp4.1LG01g02410	Cucumber (Chinese Long) v2	cpecuB468
Cp4.1LG01g02410	Cucumber (Chinese Long) v2	cpecuB470
Cp4.1LG01g02410	Bottle gourd (USVL1VR-Ls)	cpelsiB325
Cp4.1LG01g02410	Bottle gourd (USVL1VR-Ls)	cpelsiB348
Cp4.1LG01g02410	Watermelon (Charleston Gray)	cpewcgB378
Cp4.1LG01g02410	Watermelon (97103) v1	cpewmB453
Cp4.1LG01g02410	Melon (DHL92) v3.5.1	cpemeB394
Cp4.1LG01g02410	Melon (DHL92) v3.5.1	cpemeB435
Cp4.1LG01g02410	Cucumber (Gy14) v2	cgybcpeB213
Cp4.1LG01g02410	Cucumber (Gy14) v2	cgybcpeB515
Cp4.1LG01g02410	Cucumber (Gy14) v2	cgybcpeB805
Cp4.1LG01g02410	Cucumber (Gy14) v2	cgybcpeB942
Cp4.1LG01g02410	Melon (DHL92) v3.6.1	cpemedB457
Cp4.1LG01g02410	Melon (DHL92) v3.6.1	cpemedB472
Cp4.1LG01g02410	Melon (DHL92) v3.6.1	cpemedB492
Cp4.1LG01g02410	Melon (DHL92) v3.6.1	cpemedB507
Cp4.1LG01g02410	Silver-seed gourd	carcpeB0408
Cp4.1LG01g02410	Cucumber (Chinese Long) v3	cpecucB0481
Cp4.1LG01g02410	Cucumber (Chinese Long) v3	cpecucB0511
Cp4.1LG01g02410	Cucumber (Chinese Long) v3	cpecucB0576
Cp4.1LG01g02410	Cucumber (Chinese Long) v3	cpecucB0582
Cp4.1LG01g02410	Wax gourd	cpewgoB0524
Cp4.1LG01g02410	Wax gourd	cpewgoB0539
Cp4.1LG01g02410	Wax gourd	cpewgoB0547
Cp4.1LG01g02410	Wax gourd	cpewgoB0580