Lsi05G002370 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G002370
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	PRKR-interacting 1
Location	chr05 : 3134644 .. 3137950 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAGTTTCTTTTAATGTAATTTCCCTCTTGCCGGTGGCGACTCCTCTCTCTCTAAGGAAAACTTCGAATTCGTACGTCCACTGCTCTGCGACCGTCGACAAAGATGAAGTTAAAGAATCGGCAATTCACTTGAAGGTCGCATAAACATTGCTGCTTCAATTACCATAAGAGCTTCTTGGAATTGATTTGAGGAATTGTCTTACAATTAGGGTTTTAGGGTTTCTGGAATATCATGTCAACCGGCAGGCTGAAGGACGGGGAACGTCGGCTGGTGATTCCGATGCCTCCCAAACCGAAACCTGAAACGCAGTTGGCCACAACTGAGTCGAACGCGCTTGTGGAATATACGCCGCCGGTGAAGGAGGAGGATGAGGATTTGGAGGTCAAGCTCCGGAGAATCATTGATAATGTTCCTGTTCGTGTCAGCAACACGTCTGGAAGCTCTGCTGGTTCTGGTTCCGGTGATTTTCACCAGGTACTTGAGTGAATTATCTTGTTTTATATTGTGTGGATTTTCATCTGGGGTTGATTCTTGTCGATGACTTTTGTTTTCACATTTTTTTGTGGGATGTTTTTACGATGAATGTTTGATGCGTTGCTGGAAAACTGTGCAATTGCATTACTTGGAGTGGTTATTGACAGAGTATGAAATGTATCTTAGGCCTTAGGATACGCTAACAAACTTGTTTCCGGACATTATAGATTATTTGAGTAAGTGAGGTTAGCAACGGATGATGAGTGGAAGAACTTTTTATCGGGGGGAAATAGGCAGGGTGTGAACAACAGGGGTGTTGAATTAAGGTAGATGTCCCTTATTTTGATGGGAATTTGAGTATTGAAAATTCCTAGATTGGGTTTAGCTCATGTCATTTATTTGAATCTATGGACATTTGTAAAGAAAATCCTTAGAACTCAAGGACACAGCTGTACAACCTATAGAATACATCCTGTTCAAGTAAGGTCGTGATGTTTGTAAAGAAAATGGTGGTGTATACATTGAAAGAGCGAAGCCAGGGCCCTAGGGTTGATGGAGCAATTGCAAAAGCATTCTTGAAAAAGGTAGAAATTAAAATGAATACCTGGCAAGAAAGACAACCTACATTGTAGGAGTACAACTAGGATGTGGTTAGGTTACTGAGATTAGATGTTTGTAGGTAATAGGAAAATTGGGGCATCTAGTTTATATTCAGAATGGTGCGATAATTGAAGAGAAAGGCAAGGTTTTGTAAGATTCCCTGTCATGTTAAGAAACAAGGAAACTATCTACCAATAAATTTCATTCGGGTGGATTTAGAATCGTGGATTTACCTTAAAGTGGGACACCCGTTGATTCATTTTAATAATTTTGTAAACTTTACAATTGATAAAAATTTCTGGTTACATAATGAATTAATCTTATGCTCACACAGTGGGAGGGAGAAATGGATTGGAGTTTGTTAGGAACTAAGGTAACATGGGCTACTTTTGTCCCACATCGGTTAGAATGAGATGACCAATCTGATATTTAAGTGACTTGGTTCTCTCACCTCAATACCTGACTTTTGAGGTGTGGTTCCCCAAGGTGCTTAAGTACCTAACAATAGTATTAGAGCAGATTGTTGATGTTCCGGAATGGAACCGGCGGAGGGTTCTGACCAGGTGTGACCAAGTGAAGTACCATTGGAGTAGCTGTCAGGATGTTGGCTTTTTGGGGATGGGGTATTGTTAGGAACCAAGGTAGTATGAGCTACCTTTGTCCTACATTGGTTAGAATGGGATGACCAATGTGGTACTTTAGTAGCTTGGCTCTCCCACCTCAATAGCTAGCTTTTGGGGTGTGGTTCTCCAAGGTGCTTAAGTACCTAACAGAGTTATTCAGACTGAGTGGGAGGAATGATTTGGAGTAATGTTGTGTTCCATGCACCCATATTTTCACATGATATATCTATGATCATCTCTTACCAAAATCAAGTCACTATGGTTATTAGTTATCAGCAGGTTTTTGTGGTAGTGCATCAATTGACCATGGAGTAACAGTAGTATGTAAATGAATACTCTGTTTGCAACAATGCTCTTGATATTTTATCTATGTAAATGGCATTGCTTGCTTTTGTTGGTTTTCTATGTCATCTAAGAAAGGCTAGTGTCATTTAATAGAAGTGACAGGACAGGTTTATGAAAATACTGTTTGACATAAAAATGCTTTTTAGTCTGGTGTTAAATTGGCTTTTTAATATTTTAAGGAATCAAGAAAGTTCATGTTTTACTATGGGGAATTGAACTTTTCAACCTGGCTCAATGTCATCTAATGTGTTTAGGAAAGAAAGTTTCCACTTGTGTAGTCAAGTCTACAATTTTTACTTCAGAATGCATTAGATCTTTTTGTTTAACTTTAATCTATTTATCTTCCTCTCCATCCTTAATAAAGAGCAGCTATTCATGAGTTTATGGGTAATATGTCTCAATCCTTGGATTATGTAGTAATATCTGCTTGTTCCATCAAATTTTCAAATGGCAGTATAGGCAAATGAGGCGAAAAGAGCAAGACAGACTTGCTAGAATGGACGTTGATTATCAGAAAAAGAAAGAAATAGCAGAATTCAATATGCGAAGGGAAGAAAGACTGAAAGCTGCTGAGGAGCGTACTGCAAAGAAGCGCTTAAAACGCCAAAAGAAGAAGCAAAGAAGAAAAGAAAAGAGGAGCAAACTGAATTCAGGTGGAGATGAGAATCAGAAAGATGAATCCTCGGATGATGATGGGGATACAGATAATGGTGAGGATGAAGCAACATGACTGGATCTTTTCCACCTGAAATCAGAGTTTGAGAACTTTTCTCCCCGAGCTTTTTCAGATGAGCATCTAACCAGAAGACAGCCATGAGTTTGCCTACCTGGCATTTTGCCGGTCTGCAATTCCTTATAAGCCATTGTAGTACCTGGAACTGTTGGCTTTTGTGATTTTATTGCAGGTGGGGTTGGAAGAATGGATCATTTGAACATGATCCTCATATCTTCCCACAGGACACCTCTCTCTCTCTCAATTGCATGACACCCAAATGTGTTAGCAGAATATTAATTACATTACATGTTGAACAGATTGACAGAATTTTAGTTTAGTCTGAGGGATACTCGTAGTGTGTATTACTTATATATATGAACTTGTTGCTTATGATTTATGAACAGAAGGGACGTTGTTCTAAGATGAGTAGAGATGCAATATTGAAGAAATGTGATTCATACTCAATCTTTGGCCTACACTTTTAGAAACTGATATAGGTTATGAGATACAAAACTTGGGCATGCTTTGACCATTAGAATTGAATGAGG

mRNA sequence

TGGAGTTTCTTTTAATGTAATTTCCCTCTTGCCGGTGGCGACTCCTCTCTCTCTAAGGAAAACTTCGAATTCGTACGTCCACTGCTCTGCGACCGTCGACAAAGATGAAGTTAAAGAATCGGCAATTCACTTGAAGGGTTTTAGGGTTTCTGGAATATCATGTCAACCGGCAGGCTGAAGGACGGGGAACGTCGGCTGGTGATTCCGATGCCTCCCAAACCGAAACCTGAAACGCAGTTGGCCACAACTGAGTCGAACGCGCTTGTGGAATATACGCCGCCGGTGAAGGAGGAGGATGAGGATTTGGAGGTCAAGCTCCGGAGAATCATTGATAATGTTCCTGTTCGTGTCAGCAACACGTCTGGAAGCTCTGCTGGTTCTGGTTCCGGTGATTTTCACCAGTATAGGCAAATGAGGCGAAAAGAGCAAGACAGACTTGCTAGAATGGACGTTGATTATCAGAAAAAGAAAGAAATAGCAGAATTCAATATGCGAAGGGAAGAAAGACTGAAAGCTGCTGAGGAGCGTACTGCAAAGAAGCGCTTAAAACGCCAAAAGAAGAAGCAAAGAAGAAAAGAAAAGAGGAGCAAACTGAATTCAGGTGGAGATGAGAATCAGAAAGATGAATCCTCGGATGATGATGGGGATACAGATAATGGTGAGGATGAAGCAACATGACTGGATCTTTTCCACCTGAAATCAGAGTTTGAGAACTTTTCTCCCCGAGCTTTTTCAGATGAGCATCTAACCAGAAGACAGCCATGAGTTTGCCTACCTGGCATTTTGCCGGTCTGCAATTCCTTATAAGCCATTGTAGTACCTGGAACTGTTGGCTTTTGTGATTTTATTGCAGGTGGGGTTGGAAGAATGGATCATTTGAACATGATCCTCATATCTTCCCACAGGACACCTCTCTCTCTCTCAATTGCATGACACCCAAATGTGTTAGCAGAATATTAATTACATTACATGTTGAACAGATTGACAGAATTTTAGTTTAGTCTGAGGGATACTCGTAGTGTGTATTACTTATATATATGAACTTGTTGCTTATGATTTATGAACAGAAGGGACGTTGTTCTAAGATGAGTAGAGATGCAATATTGAAGAAATGTGATTCATACTCAATCTTTGGCCTACACTTTTAGAAACTGATATAGGTTATGAGATACAAAACTTGGGCATGCTTTGACCATTAGAATTGAATGAGG

Coding sequence (CDS)

ATGTCAACCGGCAGGCTGAAGGACGGGGAACGTCGGCTGGTGATTCCGATGCCTCCCAAACCGAAACCTGAAACGCAGTTGGCCACAACTGAGTCGAACGCGCTTGTGGAATATACGCCGCCGGTGAAGGAGGAGGATGAGGATTTGGAGGTCAAGCTCCGGAGAATCATTGATAATGTTCCTGTTCGTGTCAGCAACACGTCTGGAAGCTCTGCTGGTTCTGGTTCCGGTGATTTTCACCAGTATAGGCAAATGAGGCGAAAAGAGCAAGACAGACTTGCTAGAATGGACGTTGATTATCAGAAAAAGAAAGAAATAGCAGAATTCAATATGCGAAGGGAAGAAAGACTGAAAGCTGCTGAGGAGCGTACTGCAAAGAAGCGCTTAAAACGCCAAAAGAAGAAGCAAAGAAGAAAAGAAAAGAGGAGCAAACTGAATTCAGGTGGAGATGAGAATCAGAAAGATGAATCCTCGGATGATGATGGGGATACAGATAATGGTGAGGATGAAGCAACATGA

Protein sequence

MSTGRLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAAEERTAKKRLKRQKKKQRRKEKRSKLNSGGDENQKDESSDDDGDTDNGEDEAT

Homology

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BLAST of Lsi05G002370 vs. Swiss-Prot
Match: PKRI1_MOUSE (PRKR-interacting protein 1 OS=Mus musculus GN=Prkrip1 PE=1 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-07
Identity = 64/179 (35.75%), Postives = 90/179 (50.28%), Query Frame = 1


Query: 18  PPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK E Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQTLVIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMNEWAPRA 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E+   A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIA 130

Query: 138 AEERTAKKRLKRQK--------KKQRRKEKRSKLNSGGDENQKDESSDDDGDTDNGEDE 171
           AEE+TAK+R KRQK        KK + ++K+ K      + Q   SSD+  +T+  E+E
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQKEEPSQCQEQHASSSDEASETEEEEEE 178

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BLAST of Lsi05G002370 vs. Swiss-Prot
Match: PKRI1_BOVIN (PRKR-interacting protein 1 OS=Bos taurus GN=PRKRIP1 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.5e-06
Identity = 63/174 (36.21%), Postives = 89/174 (51.15%), Query Frame = 1


Query: 18  PPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK E Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQALIIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMSEWAPRP 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E    A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLEAEFQKRLERNKIA 130

Query: 138 AEERTAKKRLKRQKKKQRR-KEKRSKLNSGGDENQKDESSDDDGDTDNGEDEAT 173
           AEE+TAK+R KRQK K+++   K+ KL     + Q + SS+      +G +EA+
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLE---QKKQSEASSETQEQPSSGSEEAS 170

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BLAST of Lsi05G002370 vs. Swiss-Prot
Match: PKRI1_PONAB (PRKR-interacting protein 1 OS=Pongo abelii GN=PRKRIP1 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.4e-06
Identity = 61/175 (34.86%), Postives = 86/175 (49.14%), Query Frame = 1


Query: 18  PPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK E Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQTLVIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMSEWAPRP 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E+   A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIA 130

Query: 138 AEERTAKKRLKRQKKKQR----RKEKRSKLNSGGDENQKDESSDDDGDTDNGEDE 171
           AEE+TAK+R KRQK K++    +K K  +    G    K++ S    +    E+E
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQEGPGQPKEQGSSSSAEASGTEEE 174

[Close]

BLAST of Lsi05G002370 vs. Swiss-Prot
Match: PKRI1_HUMAN (PRKR-interacting protein 1 OS=Homo sapiens GN=PRKRIP1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.4e-06
Identity = 61/175 (34.86%), Postives = 86/175 (49.14%), Query Frame = 1


Query: 18  PPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK E Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQTLVIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMSEWAPRP 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E+   A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIA 130

Query: 138 AEERTAKKRLKRQKKKQR----RKEKRSKLNSGGDENQKDESSDDDGDTDNGEDE 171
           AEE+TAK+R KRQK K++    +K K  +    G    K++ S    +    E+E
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQEGPGQPKEQGSSSSAEASGTEEE 174

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BLAST of Lsi05G002370 vs. Swiss-Prot
Match: PKRI1_CHICK (PRKR-interacting protein 1 homolog OS=Gallus gallus GN=PRKRIP1 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.8e-06
Identity = 59/167 (35.33%), Postives = 88/167 (52.69%), Query Frame = 1


Query: 16  PMPPKPKPETQLATTESNALVEYTPPVK------EEDEDLEVKLRRIIDNVPVR-VSNTS 75
           P PP+P+ E Q      NA  E    ++      E+   +  KL       P   V +  
Sbjct: 7   PRPPRPRKEPQPLVIPRNAAEEQRLRLERLMRNPEKTVPIPEKLNEWAPRPPPEFVRDVM 66

Query: 76  GSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAAEERTAKKR 135
           GSSAG+GSG+FH YR +RR+E  R   MD   +K++   EF  + E     AEE+TAK+R
Sbjct: 67  GSSAGAGSGEFHVYRHLRRREYQRQDFMDAMAEKQRLDEEFQKKLERNKMIAEEQTAKRR 126

Query: 136 LKRQKKKQRR-KEKRSKLNSGGDENQKDES----SDDDGDTDNGEDE 171
            KRQK K+++ + K++KL     E + D+S    S +D + D+ E+E
Sbjct: 127 RKRQKLKEKKLQAKKNKLEQKKQEKESDQSQERVSSEDDEEDSKEEE 173

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BLAST of Lsi05G002370 vs. TrEMBL
Match: A0A0A0L705_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G199600 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.2e-76
Identity = 164/172 (95.35%), Postives = 169/172 (98.26%), Query Frame = 1


Query: 1   MSTGRLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTG+LKDGERRLVIPMPPKPKP+TQLAT ESNALVEYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREER+KAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120

Query: 121 EERTAKKRLKRQKKKQRRKEKRSKLNSGGDENQKDESSDDDGDTDNGEDEAT 173
           EERT+KKRLKRQKKKQRRKEKRSKLNSG DENQKDESSDD+GDTD GEDEAT
Sbjct: 121 EERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGEDEAT 172

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BLAST of Lsi05G002370 vs. TrEMBL
Match: A0A067LM79_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15460 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.4e-53
Identity = 132/179 (73.74%), Postives = 152/179 (84.92%), Query Frame = 1


Query: 1   MSTGRLKDGERRLVIP-------MPPKPKPETQLATTESNALVEYTPPV-KEEDEDLEVK 60
           MSTGR KD + ++V+        +PP+P      A T S ALVEY+ PV KEE+EDLEVK
Sbjct: 1   MSTGRPKDSDLQVVVTPDKHVSGLPPRPPA----AGTASTALVEYSAPVFKEEEEDLEVK 60

Query: 61  LRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMR 120
           LRRII+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMD DYQK+KE+AEF+MR
Sbjct: 61  LRRIIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDADYQKRKELAEFSMR 120

Query: 121 REERLKAAEERTAKKRLKRQKKKQRRKEKRSKLNSGGDENQKDESSDDDGDTDNGEDEA 172
           REERLKAAEERTAKKRLKRQKKKQ++KEK+ KLN+GG+E+QK+ESSDDDGD+D GE  A
Sbjct: 121 REERLKAAEERTAKKRLKRQKKKQKKKEKKVKLNAGGEEHQKEESSDDDGDSDTGEPAA 175

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BLAST of Lsi05G002370 vs. TrEMBL
Match: B9RY95_RICCO (Expressed protein, putative OS=Ricinus communis GN=RCOM_0811390 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.2e-52
Identity = 127/177 (71.75%), Postives = 151/177 (85.31%), Query Frame = 1


Query: 1   MSTGRLKDGERRLVIP-------MPPKPKPETQLATTESNALVEYTPPV-KEEDEDLEVK 60
           MSTGR +D + +L++        +PP+P        T S ALVEYT P+ KEE+EDLEVK
Sbjct: 1   MSTGRPEDNDLQLMVQPEKPKPALPPRPLVAAMGTGTGSTALVEYTAPMLKEEEEDLEVK 60

Query: 61  LRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMR 120
           LRRII+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARM+VDYQK+KE+AEFNMR
Sbjct: 61  LRRIIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQKRKELAEFNMR 120

Query: 121 REERLKAAEERTAKKRLKRQKKKQRRKEKRSKLNSGGDENQKDESSDDDGDTDNGED 170
           REE+LKAAEERTAKKRLKRQ+KKQR+KEK+ K+N+GG+E QK ESSDD+GD+D+GE+
Sbjct: 121 REEKLKAAEERTAKKRLKRQRKKQRKKEKKMKVNAGGEEQQKHESSDDEGDSDDGEE 177

[Close]

BLAST of Lsi05G002370 vs. TrEMBL
Match: A0A0B0P818_GOSAR (PRKR-interacting 1 OS=Gossypium arboreum GN=F383_07187 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.4e-51
Identity = 130/173 (75.14%), Postives = 148/173 (85.55%), Query Frame = 1


Query: 1   MSTGRLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPV-KEEDEDLEVKLRRIIDN 60
           MSTGR KDG+ +L +  P    P    +TT S A+VEY  P  KEE+EDLEVKLRRII+N
Sbjct: 1   MSTGRPKDGDTQLAVVEPKSGLPPRPPSTT-STAIVEYEKPAFKEEEEDLEVKLRRIIEN 60

Query: 61  VPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKA 120
           VPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQK+KEIAEFNMRREERLKA
Sbjct: 61  VPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKRKEIAEFNMRREERLKA 120

Query: 121 AEERTAKKRLKRQKKKQRRKEKRSKLNSGGDENQKDESSDDDGDTDNGEDEAT 173
           AEERTAKKRLKRQKKKQR+KEK+ KL++ G EN+K+ESSDD+ D+++  DEAT
Sbjct: 121 AEERTAKKRLKRQKKKQRKKEKKMKLSAEGGENKKEESSDDEADSEH--DEAT 170

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BLAST of Lsi05G002370 vs. TrEMBL
Match: F6I5Y2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0180g00180 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.1e-51
Identity = 132/176 (75.00%), Postives = 150/176 (85.23%), Query Frame = 1


Query: 1   MSTGRLK---DGERRLVIPMPPKPKPETQLA--TTESNALVEYTPPVK-EEDEDLEVKLR 60
           MS+GR K   DG+ + VIP P KPKP          S ALVEY PP   E++EDLEVKLR
Sbjct: 1   MSSGRSKSLTDGDLQ-VIPAPEKPKPALPPLPPVVGSMALVEYAPPAPLEDEEDLEVKLR 60

Query: 61  RIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRRE 120
           RIID+VPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQ++KEIAEFNMR+E
Sbjct: 61  RIIDHVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQRRKEIAEFNMRQE 120

Query: 121 ERLKAAEERTAKKRLKRQKKKQRRKEKRSKLNSGGDENQKDESSDDDGD-TDNGED 170
           ER+KAAEERTAKKRLKRQKKKQ++KEK+ KLN+GG+E QK+ESSDDDGD ++NGED
Sbjct: 121 ERMKAAEERTAKKRLKRQKKKQKKKEKKIKLNAGGEEQQKEESSDDDGDSSENGED 175

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BLAST of Lsi05G002370 vs. TAIR10
Match: AT2G15270.1 (AT2G15270.1 unknown protein)

HSP 1 Score: 153.7 bits (387), Expect = 1.0e-37
Identity = 102/173 (58.96%), Postives = 133/173 (76.88%), Query Frame = 1


Query: 1   MSTGRLKDGERRLVIPMPPKPK-PETQLATTE-SNALVEYTPPVK-EEDEDLEVKLRRII 60
           MS+G+ K G+ RLV+         E + A    S+++VEY PPV  E++EDLEVKLRRI+
Sbjct: 1   MSSGKPKQGDTRLVVAATTASALMEAKKADHGGSSSIVEYKPPVMLEDEEDLEVKLRRIL 60

Query: 61  DNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERL 120
           +NVPVRVSNTSGSSAGSGSGDFHQYRQMRR+EQDRL RMD+DY K+ ++AEF +RREE+ 
Sbjct: 61  ENVPVRVSNTSGSSAGSGSGDFHQYRQMRRREQDRLTRMDIDYNKRLKMAEFTIRREEKQ 120

Query: 121 KAAEERTAKKRLKRQKKKQRRKEKRSKLNSGGDENQKDESSDDDGDTDNGEDE 171
           KAAEE+T+KKRLKRQKKKQ+++EK+ K N+  +E ++    +    +D GEDE
Sbjct: 121 KAAEEKTSKKRLKRQKKKQKKQEKKQKPNTTEEEVKQPRVGEI--SSDEGEDE 171

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BLAST of Lsi05G002370 vs. NCBI nr
Match: gi|659112331|ref|XP_008456169.1| (PREDICTED: PRKR-interacting protein 1 [Cucumis melo])

HSP 1 Score: 295.0 bits (754), Expect = 8.2e-77
Identity = 165/172 (95.93%), Postives = 170/172 (98.84%), Query Frame = 1


Query: 1   MSTGRLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTG+LKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREER+KAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120

Query: 121 EERTAKKRLKRQKKKQRRKEKRSKLNSGGDENQKDESSDDDGDTDNGEDEAT 173
           EERTAKKRLKRQKKKQRRKEKRSK+NSG DENQK+ESSDD+GDTD GEDEAT
Sbjct: 121 EERTAKKRLKRQKKKQRRKEKRSKMNSGEDENQKEESSDDEGDTDKGEDEAT 172

[Close]

BLAST of Lsi05G002370 vs. NCBI nr
Match: gi|778680024|ref|XP_011651236.1| (PREDICTED: PRKR-interacting protein 1 [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 3.1e-76
Identity = 164/172 (95.35%), Postives = 169/172 (98.26%), Query Frame = 1


Query: 1   MSTGRLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTG+LKDGERRLVIPMPPKPKP+TQLAT ESNALVEYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREER+KAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120

Query: 121 EERTAKKRLKRQKKKQRRKEKRSKLNSGGDENQKDESSDDDGDTDNGEDEAT 173
           EERT+KKRLKRQKKKQRRKEKRSKLNSG DENQKDESSDD+GDTD GEDEAT
Sbjct: 121 EERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGEDEAT 172

[Close]

BLAST of Lsi05G002370 vs. NCBI nr
Match: gi|802540316|ref|XP_012075843.1| (PREDICTED: PRKR-interacting protein 1 [Jatropha curcas])

HSP 1 Score: 215.7 bits (548), Expect = 6.3e-53
Identity = 132/179 (73.74%), Postives = 152/179 (84.92%), Query Frame = 1


Query: 1   MSTGRLKDGERRLVIP-------MPPKPKPETQLATTESNALVEYTPPV-KEEDEDLEVK 60
           MSTGR KD + ++V+        +PP+P      A T S ALVEY+ PV KEE+EDLEVK
Sbjct: 1   MSTGRPKDSDLQVVVTPDKHVSGLPPRPPA----AGTASTALVEYSAPVFKEEEEDLEVK 60

Query: 61  LRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMR 120
           LRRII+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMD DYQK+KE+AEF+MR
Sbjct: 61  LRRIIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDADYQKRKELAEFSMR 120

Query: 121 REERLKAAEERTAKKRLKRQKKKQRRKEKRSKLNSGGDENQKDESSDDDGDTDNGEDEA 172
           REERLKAAEERTAKKRLKRQKKKQ++KEK+ KLN+GG+E+QK+ESSDDDGD+D GE  A
Sbjct: 121 REERLKAAEERTAKKRLKRQKKKQKKKEKKVKLNAGGEEHQKEESSDDDGDSDTGEPAA 175

[Close]

BLAST of Lsi05G002370 vs. NCBI nr
Match: gi|255555285|ref|XP_002518679.1| (PREDICTED: PRKR-interacting protein 1 [Ricinus communis])

HSP 1 Score: 213.4 bits (542), Expect = 3.1e-52
Identity = 127/177 (71.75%), Postives = 151/177 (85.31%), Query Frame = 1


Query: 1   MSTGRLKDGERRLVIP-------MPPKPKPETQLATTESNALVEYTPPV-KEEDEDLEVK 60
           MSTGR +D + +L++        +PP+P        T S ALVEYT P+ KEE+EDLEVK
Sbjct: 1   MSTGRPEDNDLQLMVQPEKPKPALPPRPLVAAMGTGTGSTALVEYTAPMLKEEEEDLEVK 60

Query: 61  LRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMR 120
           LRRII+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARM+VDYQK+KE+AEFNMR
Sbjct: 61  LRRIIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQKRKELAEFNMR 120

Query: 121 REERLKAAEERTAKKRLKRQKKKQRRKEKRSKLNSGGDENQKDESSDDDGDTDNGED 170
           REE+LKAAEERTAKKRLKRQ+KKQR+KEK+ K+N+GG+E QK ESSDD+GD+D+GE+
Sbjct: 121 REEKLKAAEERTAKKRLKRQRKKQRKKEKKMKVNAGGEEQQKHESSDDEGDSDDGEE 177

[Close]

BLAST of Lsi05G002370 vs. NCBI nr
Match: gi|728841762|gb|KHG21205.1| (PRKR-interacting 1 [Gossypium arboreum])

HSP 1 Score: 209.9 bits (533), Expect = 3.5e-51
Identity = 130/173 (75.14%), Postives = 148/173 (85.55%), Query Frame = 1


Query: 1   MSTGRLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPV-KEEDEDLEVKLRRIIDN 60
           MSTGR KDG+ +L +  P    P    +TT S A+VEY  P  KEE+EDLEVKLRRII+N
Sbjct: 1   MSTGRPKDGDTQLAVVEPKSGLPPRPPSTT-STAIVEYEKPAFKEEEEDLEVKLRRIIEN 60

Query: 61  VPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKA 120
           VPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQK+KEIAEFNMRREERLKA
Sbjct: 61  VPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKRKEIAEFNMRREERLKA 120

Query: 121 AEERTAKKRLKRQKKKQRRKEKRSKLNSGGDENQKDESSDDDGDTDNGEDEAT 173
           AEERTAKKRLKRQKKKQR+KEK+ KL++ G EN+K+ESSDD+ D+++  DEAT
Sbjct: 121 AEERTAKKRLKRQKKKQRKKEKKMKLSAEGGENKKEESSDDEADSEH--DEAT 170

The following BLAST results are available for this feature:

BLAST of Lsi05G002370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PKRI1_MOUSE	2.4e-07	35.75	PRKR-interacting protein 1 OS=Mus musculus GN=Prkrip1 PE=1 SV=2	[more]
PKRI1_BOVIN	1.5e-06	36.21	PRKR-interacting protein 1 OS=Bos taurus GN=PRKRIP1 PE=2 SV=1	[more]
PKRI1_PONAB	3.4e-06	34.86	PRKR-interacting protein 1 OS=Pongo abelii GN=PRKRIP1 PE=2 SV=1	[more]
PKRI1_HUMAN	3.4e-06	34.86	PRKR-interacting protein 1 OS=Homo sapiens GN=PRKRIP1 PE=1 SV=1	[more]
PKRI1_CHICK	5.8e-06	35.33	PRKR-interacting protein 1 homolog OS=Gallus gallus GN=PRKRIP1 PE=2 SV=1	[more]

BLAST of Lsi05G002370 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L705_CUCSA	2.2e-76	95.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G199600 PE=4 SV=1	[more]
A0A067LM79_JATCU	4.4e-53	73.74	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15460 PE=4 SV=1	[more]
B9RY95_RICCO	2.2e-52	71.75	Expressed protein, putative OS=Ricinus communis GN=RCOM_0811390 PE=4 SV=1	[more]
A0A0B0P818_GOSAR	2.4e-51	75.14	PRKR-interacting 1 OS=Gossypium arboreum GN=F383_07187 PE=4 SV=1	[more]
F6I5Y2_VITVI	4.1e-51	75.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0180g00180 PE=4 SV=...	[more]

BLAST of Lsi05G002370 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G15270.1	1.0e-37	58.96	unknown protein	[more]

BLAST of Lsi05G002370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659112331\|ref\|XP_008456169.1\|	8.2e-77	95.93	PREDICTED: PRKR-interacting protein 1 [Cucumis melo]	[more]
gi\|778680024\|ref\|XP_011651236.1\|	3.1e-76	95.35	PREDICTED: PRKR-interacting protein 1 [Cucumis sativus]	[more]
gi\|802540316\|ref\|XP_012075843.1\|	6.3e-53	73.74	PREDICTED: PRKR-interacting protein 1 [Jatropha curcas]	[more]
gi\|255555285\|ref\|XP_002518679.1\|	3.1e-52	71.75	PREDICTED: PRKR-interacting protein 1 [Ricinus communis]	[more]
gi\|728841762\|gb\|KHG21205.1\|	3.5e-51	75.14	PRKR-interacting 1 [Gossypium arboreum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009548	DUF1168

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006469	negative regulation of protein kinase activity
biological_process	GO:0008150	biological_process
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003725	double-stranded RNA binding
molecular_function	GO:0019901	protein kinase binding
molecular_function	GO:0004860	protein kinase inhibitor activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G002370.1	Lsi05G002370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009548	Protein of unknown function DUF1168	PANTHER	PTHR13507	UNCHARACTERIZED	coord: 2..170 score: 4.7
IPR009548	Protein of unknown function DUF1168	PFAM	PF06658	DUF1168	coord: 54..169 score: 2.2
None	No IPR available	unknown	Coil	Coil	coord: 112..146 scor
None	No IPR available	PANTHER	PTHR13507:SF0	PRKR-INTERACTING PROTEIN 1	coord: 2..170 score: 4.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G002370	Csa3G199600	Cucumber (Chinese Long) v2	culsiB211
Lsi05G002370	CSPI03G18150	Wild cucumber (PI 183967)	cpilsiB209
Lsi05G002370	Cucsa.244640	Cucumber (Gy14) v1	cgylsiB404
Lsi05G002370	CmaCh04G004720	Cucurbita maxima (Rimu)	cmalsiB690
Lsi05G002370	CmoCh04G005060	Cucurbita moschata (Rifu)	cmolsiB683
Lsi05G002370	Cla013097	Watermelon (97103) v1	lsiwmB361
Lsi05G002370	MELO3C019546	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G002370	ClCG05G010280	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G002370	MELO3C019546.2	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G002370	Cla97C05G092660	Watermelon (97103) v2	lsiwmbB329
Lsi05G002370	Bhi01G001281	Wax gourd	lsiwgoB431
Lsi05G002370	Cp4.1LG01g02410	Cucurbita pepo (Zucchini)	cpelsiB369
Lsi05G002370	CsGy3G018040	Cucumber (Gy14) v2	cgyblsiB198
Lsi05G002370	Carg08143	Silver-seed gourd	carlsiB346
Lsi05G002370	CsaV3_3G018210	Cucumber (Chinese Long) v3	cuclsiB230

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G002370	Wild cucumber (PI 183967)	cpilsiB541
Lsi05G002370	Cucumber (Chinese Long) v2	culsiB527
Lsi05G002370	Melon (DHL92) v3.5.1	lsimeB346
Lsi05G002370	Melon (DHL92) v3.5.1	lsimeB388
Lsi05G002370	Watermelon (Charleston Gray)	lsiwcgB330
Lsi05G002370	Watermelon (97103) v1	lsiwmB380
Lsi05G002370	Cucumber (Gy14) v2	cgyblsiB496
Lsi05G002370	Melon (DHL92) v3.6.1	lsimedB363
Lsi05G002370	Melon (DHL92) v3.6.1	lsimedB409
Lsi05G002370	Silver-seed gourd	carlsiB270
Lsi05G002370	Cucumber (Chinese Long) v3	cuclsiB562
Lsi05G002370	Watermelon (97103) v2	lsiwmbB326
Lsi05G002370	Watermelon (97103) v2	lsiwmbB317
Lsi05G002370	Wax gourd	lsiwgoB458
Lsi05G002370	Wax gourd	lsiwgoB468
Lsi05G002370	Bottle gourd (USVL1VR-Ls)	lsilsiB080
Lsi05G002370	Bottle gourd (USVL1VR-Ls)	lsilsiB132
Lsi05G002370	Cucumber (Gy14) v1	cgylsiB369
Lsi05G002370	Cucurbita maxima (Rimu)	cmalsiB127
Lsi05G002370	Cucurbita maxima (Rimu)	cmalsiB316
Lsi05G002370	Cucurbita maxima (Rimu)	cmalsiB493
Lsi05G002370	Cucurbita moschata (Rifu)	cmolsiB116
Lsi05G002370	Cucurbita moschata (Rifu)	cmolsiB304
Lsi05G002370	Cucurbita moschata (Rifu)	cmolsiB478
Lsi05G002370	Cucurbita pepo (Zucchini)	cpelsiB177
Lsi05G002370	Cucurbita pepo (Zucchini)	cpelsiB554