Cucsa.244640 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.244640
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionPRKR-interacting 1
Locationscaffold02135 : 505861 .. 508587 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCAAAATAAACCAACAAATACTCGGAAATGTCAAAAGGCATAACTTTGAATTCCTACGGCGTCGGCGAGGCATAAACTCACTGCTCTTCGACGGTCGACAGAAATGAAGTCAAAGAATCCTCGATTCACTTGAAGGTGGGAGAAAACATAGCTGCTTCAGTTACCATTAGACCTTCTTGGAGTTTATTGAGGAAATTTTTACAATTAGGGCTTTAGGGTTTCTGGAATACCATGTCAACCGGCAAGCTTAAGGACGGGGAACGTCGGCTGGTGATTCCGATGCCTCCCAAACCCAAACCTGACACGCAGTTGGCCACGGCTGAGTCTAACGCGCTTGTCGAATATACGCCGCCGGTGAAGGAGGAGGATGAGGATTTGGAGGTCAAGCTACGGAGAATCATAGATAATGTTCCTGTTCGTGTCAGCAACACGTCTGGCAGCTCTGCTGGTTCTGGTTCCGGTGATTTTCACCAGGTACTCCAGTGGATTATCTTGTTTTATATTGCGTAGATTTTCATCTGGGATTGATTCTTGTTGATGACTTTTGTTTTCGTATTACTTTGTGGGATATTTTTACGATGAATGTTTAATGCATTGATGGAAAATTTGTAATTGCATTACTTGAAGTGGTTATTGACGGAGTATGAAATGTATGTTAAGCCTTGGGATGTGCTAACAAACTTGTTTCCTGACATTTTTTTATCATTCGAGTTATTGAGGGAGCAAAGGTTGATGAGTGGAAGAACTTTTTATCGGGCGGAAATAGGCAGGGTGTGAACGACAGGGGAGTTGAATGAAGGTTGATGTTTCTTATTTTGATGGGAACTGGAATCTTGAAAATTCCTAGATTCGGTTATTAGGTCATGGAGCAGTTATTTGAATCTATGGACATCTGCAAAGAAATGGCTTAGAACTCAAGGACTCAGTTGTGGAACCTGTAGGATTGACCTTGTTCAAGTAGGTTGTGACATTTGTAAAGAAGATCATGGTGTACAAATTGAAAGAGCGAAGCTAAGGCCCTAGGGTTGTTGTAACCATTGCAAAAGCATTGTTGAAAAAGGTAGAAATTAGATGAATACATGACAAAAAAGACAACCTACATGGTAGGAATACAAGTAGGATGTAGTTGGATTACCAATTAATTGTTTTATGTTCGTAGGTAATAGGAAAACTGGGGCATCTAGTTTATGTTCAGAATGGTTTGGTAGTTGAAGAGAGAGACAAGATTTTATTAGATGCCTGGCATGTTAGAAAACAAGGAAAATATCCACCAATAAATTTGAATGGATCTAGAATTGTGGATTTATCTTAAAATGGGATGCCCATTGTTTCATTTTAATTATTTTGTAAACTTTCGAGTGAAAGATGATACATTTGATAAAATTTTCTGGTGACATAATGAAGTAATCTTATCCTCTCACAGTGTGAGGTAGAAATGAGTTGGAGTAATGTTGTGTTCCATGCACCCATATTTTCATATGATATAGCTATGGTTATCTCCTACCAAAATCAAGTTACTATGACTATTATCACTCAGGTTTTTGTGGTAGAGTGCATCAATTGACCATGGTGTAACAGTAGTATGGAGACTGTTATCAACAATACTCTTGAAATTTTGGCCAAAGTAAATATGTTCCTTGCTTTTGTTGATTTTCCCATGTCATCTAAGAACGGCTAATGTAATTTAATAGAAGTGACAGGACGGCCGACAGGTTTATGAAAATACTATTTGAAATAAAAATGCTCTTCAGTCTGGTGTGGATCGATCCTTTTCAACCTGATTCAATGTTACTGGTGTTTAGGAAAGGAAGTCTCCACTTGTGTGGTTAAGTCTACAATTTTTACTTTAGCATGCATTAGATCTTTTTGCTTCCTTTAATCTATTTTTATTCCTCTCTCCTTAATAAAGAGCAGCTATTCGTGAGTTTATGGTAATATGTCTCTATCCTTGGATTATGTAGTAATGTTTGCTTGTTCCATCAAATTTTCAAATGGCAGTATAGGCAAATGAGGCGAAAAGAGCAAGACAGACTTGCTAGAATGGACGTTGATTATCAGAAAAAGAAAGAAATAGCCGAATTCAATATGAGAAGGGAAGAGAGAATGAAAGCTGCTGAGGAGCGTACATCAAAGAAGCGCTTAAAACGCCAAAAGAAGAAGCAAAGAAGAAAAGAAAAGAGGAGCAAATTGAATTCGGGTGAAGATGAGAATCAGAAAGATGAGTCCTCTGATGATGAAGGGGATACGGATAAGGGTGAGGATGAAGCAACATGACTGGATCTTTCCCACCTGGAATCAAAGTTTAAAGTTCGAACTTTTCTCCCCAAGCCTTTCCAGATGAGCATCGAACCAGGTGACAACCACGAGTTTGCGTACCTGACATTTTGCTGGTTTGCAATTCCTTATGAGCCGTTGTAGTACGAGGATCTGTTAGCTTTTGTGATTTTCTTGAAGGTGAGGTTGGAAGAATTGGATCATTTGAATATAATTCTGCTATCTTCTCACAGGACACCACACACTCTCTCTTTAAATTACATGACAACCAACGTGTACGCAGAATATCTATTACATTACATGTTGAACAGATCGATAGAATTTTAGTTTAGTCTGAGGGATACTCGTTGCTTATGAACTTGTTGCTTATGATTTTATGAACGGAAGGGATGTAATTCTGAGATGAGCAGAGATGCAAAGTTCAAGAAATGTGATTCAATACTTTGGCCGA

mRNA sequence

CTCCAAAATAAACCAACAAATACTCGGAAATGTCAAAAGGCATAACTTTGAATTCCTACGGCGTCGGCGAGGCATAAACTCACTGCTCTTCGACGGTCGACAGAAATGAAGTCAAAGAATCCTCGATTCACTTGAAGGTGGGAGAAAACATAGCTGCTTCAGTTACCATTAGACCTTCTTGGAGTTTATTGAGGAAATTTTTACAATTAGGGCTTTAGGGTTTCTGGAATACCATGTCAACCGGCAAGCTTAAGGACGGGGAACGTCGGCTGGTGATTCCGATGCCTCCCAAACCCAAACCTGACACGCAGTTGGCCACGGCTGAGTCTAACGCGCTTGTCGAATATACGCCGCCGGTGAAGGAGGAGGATGAGGATTTGGAGGTCAAGCTACGGAGAATCATAGATAATGTTCCTGTTCGTGTCAGCAACACGTCTGGCAGCTCTGCTGGTTCTGGTTCCGGTGATTTTCACCAGTATAGGCAAATGAGGCGAAAAGAGCAAGACAGACTTGCTAGAATGGACGTTGATTATCAGAAAAAGAAAGAAATAGCCGAATTCAATATGAGAAGGGAAGAGAGAATGAAAGCTGCTGAGGAGCGTACATCAAAGAAGCGCTTAAAACGCCAAAAGAAGAAGCAAAGAAGAAAAGAAAAGAGGAGCAAATTGAATTCGGGTGAAGATGAGAATCAGAAAGATGAGTCCTCTGATGATGAAGGGGATACGGATAAGGGTGAGGATGAAGCAACATGACTGGATCTTTCCCACCTGGAATCAAAGTTTAAAGTTCGAACTTTTCTCCCCAAGCCTTTCCAGATGAGCATCGAACCAGGTGACAACCACGAGTTTGCGTACCTGACATTTTGCTGGTTTGCAATTCCTTATGAGCCGTTGTAGTACGAGGATCTGTTAGCTTTTGTGATTTTCTTGAAGGTGAGGTTGGAAGAATTGGATCATTTGAATATAATTCTGCTATCTTCTCACAGGACACCACACACTCTCTCTTTAAATTACATGACAACCAACGTGTACGCAGAATATCTATTACATTACATGTTGAACAGATCGATAGAATTTTAGTTTAGTCTGAGGGATACTCGTTGCTTATGAACTTGTTGCTTATGATTTTATGAACGGAAGGGATGTAATTCTGAGATGAGCAGAGATGCAAAGTTCAAGAAATGTGATTCAATACTTTGGCCGA

Coding sequence (CDS)

ATGTCAACCGGCAAGCTTAAGGACGGGGAACGTCGGCTGGTGATTCCGATGCCTCCCAAACCCAAACCTGACACGCAGTTGGCCACGGCTGAGTCTAACGCGCTTGTCGAATATACGCCGCCGGTGAAGGAGGAGGATGAGGATTTGGAGGTCAAGCTACGGAGAATCATAGATAATGTTCCTGTTCGTGTCAGCAACACGTCTGGCAGCTCTGCTGGTTCTGGTTCCGGTGATTTTCACCAGTATAGGCAAATGAGGCGAAAAGAGCAAGACAGACTTGCTAGAATGGACGTTGATTATCAGAAAAAGAAAGAAATAGCCGAATTCAATATGAGAAGGGAAGAGAGAATGAAAGCTGCTGAGGAGCGTACATCAAAGAAGCGCTTAAAACGCCAAAAGAAGAAGCAAAGAAGAAAAGAAAAGAGGAGCAAATTGAATTCGGGTGAAGATGAGAATCAGAAAGATGAGTCCTCTGATGATGAAGGGGATACGGATAAGGGTGAGGATGAAGCAACATGA

Protein sequence

MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAAEERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGEDEAT*
Homology
[Close]
BLAST of Cucsa.244640 vs. Swiss-Prot
Match: PKRI1_MOUSE (PRKR-interacting protein 1 OS=Mus musculus GN=Prkrip1 PE=1 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 2.3e-18
Identity = 62/179 (34.64%), Postives = 92/179 (51.40%), Query Frame = 1 

Query: 18  PPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK + Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQTLVIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMNEWAPRA 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E+   A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIA 130

Query: 138 AEERTSKKRLKRQK--------KKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGEDE 171
           AEE+T+K+R KRQK        KK + ++K+ K    + + Q   SSD+  +T++ E+E
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQKEEPSQCQEQHASSSDEASETEEEEEE 178

[Close]
BLAST of Cucsa.244640 vs. Swiss-Prot
Match: PKRI1_BOVIN (PRKR-interacting protein 1 OS=Bos taurus GN=PRKRIP1 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.5e-17
Identity = 62/174 (35.63%), Postives = 90/174 (51.72%), Query Frame = 1 

Query: 18  PPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK + Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQALIIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMSEWAPRP 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E    A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLEAEFQKRLERNKIA 130

Query: 138 AEERTSKKRLKRQKKKQRR-KEKRSKLNSGEDENQKDESSDDEGDTDKGEDEAT 173
           AEE+T+K+R KRQK K+++   K+ KL   E + Q + SS+ +     G +EA+
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKL---EQKKQSEASSETQEQPSSGSEEAS 170

[Close]
BLAST of Cucsa.244640 vs. Swiss-Prot
Match: PKRI1_CHICK (PRKR-interacting protein 1 homolog OS=Gallus gallus GN=PRKRIP1 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 9.6e-17
Identity = 57/168 (33.93%), Postives = 89/168 (52.98%), Query Frame = 1 

Query: 16  PMPPKPKPDTQLATAESNALVEYTPPVK------EEDEDLEVKLRRIIDNVPVR-VSNTS 75
           P PP+P+ + Q      NA  E    ++      E+   +  KL       P   V +  
Sbjct: 7   PRPPRPRKEPQPLVIPRNAAEEQRLRLERLMRNPEKTVPIPEKLNEWAPRPPPEFVRDVM 66

Query: 76  GSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAAEERTSKKR 135
           GSSAG+GSG+FH YR +RR+E  R   MD   +K++   EF  + E     AEE+T+K+R
Sbjct: 67  GSSAGAGSGEFHVYRHLRRREYQRQDFMDAMAEKQRLDEEFQKKLERNKMIAEEQTAKRR 126

Query: 136 LKRQKKKQRR-KEKRSKLNSGEDENQKDE-----SSDDEGDTDKGEDE 171
            KRQK K+++ + K++KL   + E + D+     SS+D+ +  K E+E
Sbjct: 127 RKRQKLKEKKLQAKKNKLEQKKQEKESDQSQERVSSEDDEEDSKEEEE 174

[Close]
BLAST of Cucsa.244640 vs. Swiss-Prot
Match: PKRI1_HUMAN (PRKR-interacting protein 1 OS=Homo sapiens GN=PRKRIP1 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.6e-16
Identity = 59/177 (33.33%), Postives = 90/177 (50.85%), Query Frame = 1 

Query: 18  PPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK + Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQTLVIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMSEWAPRP 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E+   A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIA 130

Query: 138 AEERTSKKRLKRQKKKQR-------RKEKRSKLNSGEDENQKDESSDDEGDTDKGED 170
           AEE+T+K+R KRQK K++       + E++ +   G+ + Q   SS +   T++ E+
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQEGPGQPKEQGSSSSAEASGTEEEEE 176

[Close]
BLAST of Cucsa.244640 vs. Swiss-Prot
Match: PKRI1_PONAB (PRKR-interacting protein 1 OS=Pongo abelii GN=PRKRIP1 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.6e-16
Identity = 59/177 (33.33%), Postives = 90/177 (50.85%), Query Frame = 1 

Query: 18  PPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK + Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQTLVIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMSEWAPRP 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E+   A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIA 130

Query: 138 AEERTSKKRLKRQKKKQR-------RKEKRSKLNSGEDENQKDESSDDEGDTDKGED 170
           AEE+T+K+R KRQK K++       + E++ +   G+ + Q   SS +   T++ E+
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQEGPGQPKEQGSSSSAEASGTEEEEE 176

[Close]
BLAST of Cucsa.244640 vs. TrEMBL
Match: A0A0A0L705_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G199600 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 5.4e-91
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1 

Query: 1   MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120

Query: 121 EERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGEDEAT 173
           EERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGEDEAT
Sbjct: 121 EERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGEDEAT 172

[Close]
BLAST of Cucsa.244640 vs. TrEMBL
Match: A0A067LM79_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15460 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 5.8e-61
Identity = 126/179 (70.39%), Postives = 150/179 (83.80%), Query Frame = 1 

Query: 1   MSTGKLKDGERRLVIP-------MPPKPKPDTQLATAESNALVEYTPPV-KEEDEDLEVK 60
           MSTG+ KD + ++V+        +PP+P      A   S ALVEY+ PV KEE+EDLEVK
Sbjct: 1   MSTGRPKDSDLQVVVTPDKHVSGLPPRPPA----AGTASTALVEYSAPVFKEEEEDLEVK 60

Query: 61  LRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMR 120
           LRRII+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMD DYQK+KE+AEF+MR
Sbjct: 61  LRRIIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDADYQKRKELAEFSMR 120

Query: 121 REERMKAAEERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGEDEA 172
           REER+KAAEERT+KKRLKRQKKKQ++KEK+ KLN+G +E+QK+ESSDD+GD+D GE  A
Sbjct: 121 REERLKAAEERTAKKRLKRQKKKQKKKEKKVKLNAGGEEHQKEESSDDDGDSDTGEPAA 175

[Close]
BLAST of Cucsa.244640 vs. TrEMBL
Match: B9RY95_RICCO (Expressed protein, putative OS=Ricinus communis GN=RCOM_0811390 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 9.9e-61
Identity = 123/177 (69.49%), Postives = 148/177 (83.62%), Query Frame = 1 

Query: 1   MSTGKLKDGERRLVIP-------MPPKPKPDTQLATAESNALVEYTPPV-KEEDEDLEVK 60
           MSTG+ +D + +L++        +PP+P          S ALVEYT P+ KEE+EDLEVK
Sbjct: 1   MSTGRPEDNDLQLMVQPEKPKPALPPRPLVAAMGTGTGSTALVEYTAPMLKEEEEDLEVK 60

Query: 61  LRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMR 120
           LRRII+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARM+VDYQK+KE+AEFNMR
Sbjct: 61  LRRIIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQKRKELAEFNMR 120

Query: 121 REERMKAAEERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGED 170
           REE++KAAEERT+KKRLKRQ+KKQR+KEK+ K+N+G +E QK ESSDDEGD+D GE+
Sbjct: 121 REEKLKAAEERTAKKRLKRQRKKQRKKEKKMKVNAGGEEQQKHESSDDEGDSDDGEE 177

[Close]
BLAST of Cucsa.244640 vs. TrEMBL
Match: A0A0B0P818_GOSAR (PRKR-interacting 1 OS=Gossypium arboreum GN=F383_07187 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.1e-59
Identity = 126/173 (72.83%), Postives = 145/173 (83.82%), Query Frame = 1 

Query: 1   MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPV-KEEDEDLEVKLRRIIDN 60
           MSTG+ KDG+ +L +  P    P    +T  S A+VEY  P  KEE+EDLEVKLRRII+N
Sbjct: 1   MSTGRPKDGDTQLAVVEPKSGLPPRPPSTT-STAIVEYEKPAFKEEEEDLEVKLRRIIEN 60

Query: 61  VPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKA 120
           VPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQK+KEIAEFNMRREER+KA
Sbjct: 61  VPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKRKEIAEFNMRREERLKA 120

Query: 121 AEERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGEDEAT 173
           AEERT+KKRLKRQKKKQR+KEK+ KL++   EN+K+ESSDDE D++   DEAT
Sbjct: 121 AEERTAKKRLKRQKKKQRKKEKKMKLSAEGGENKKEESSDDEADSE--HDEAT 170

[Close]
BLAST of Cucsa.244640 vs. TrEMBL
Match: I1LEJ5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G262200 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.4e-59
Identity = 122/172 (70.93%), Postives = 149/172 (86.63%), Query Frame = 1 

Query: 1   MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTP-PVKEEDEDLEVKLRRIIDN 60
           MSTGK +DGE ++V P P   KP      A +NA+VEYTP  +KE++EDLE+KLRRIIDN
Sbjct: 1   MSTGKPRDGEFQMV-PAPGTSKPPLP-PVAATNAIVEYTPVSLKEDEEDLEIKLRRIIDN 60

Query: 61  VPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKA 120
           VPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARM+VDYQK+KE+AEFN+RREER+KA
Sbjct: 61  VPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQKRKEVAEFNLRREERLKA 120

Query: 121 AEERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGEDEA 172
           AEERT+KKR +RQKKKQR+KEK++KLN+GE++ +K++SS D GD+D  E+ A
Sbjct: 121 AEERTAKKRARRQKKKQRKKEKKTKLNAGEEQQKKEDSSSD-GDSDNDEEAA 169

[Close]
BLAST of Cucsa.244640 vs. TAIR10
Match: AT2G15270.1 (AT2G15270.1 unknown protein)

HSP 1 Score: 196.1 bits (497), Expect = 1.8e-50
Identity = 106/177 (59.89%), Postives = 137/177 (77.40%), Query Frame = 1 

Query: 1   MSTGKLKDGERRLVIPMPPKPK--PDTQLATAESNALVEYTPPVK-EEDEDLEVKLRRII 60
           MS+GK K G+ RLV+            +     S+++VEY PPV  E++EDLEVKLRRI+
Sbjct: 1   MSSGKPKQGDTRLVVAATTASALMEAKKADHGGSSSIVEYKPPVMLEDEEDLEVKLRRIL 60

Query: 61  DNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERM 120
           +NVPVRVSNTSGSSAGSGSGDFHQYRQMRR+EQDRL RMD+DY K+ ++AEF +RREE+ 
Sbjct: 61  ENVPVRVSNTSGSSAGSGSGDFHQYRQMRRREQDRLTRMDIDYNKRLKMAEFTIRREEKQ 120

Query: 121 KAAEERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQK---DESSDDEGDTDKGEDEA 172
           KAAEE+TSKKRLKRQKKKQ+++EK+ K N+ E+E ++    E S DEG+ D+ E+E+
Sbjct: 121 KAAEEKTSKKRLKRQKKKQKKQEKKQKPNTTEEEVKQPRVGEISSDEGE-DEVEEES 176

[Close]
BLAST of Cucsa.244640 vs. NCBI nr
Match: gi|778680024|ref|XP_011651236.1| (PREDICTED: PRKR-interacting protein 1 [Cucumis sativus])

HSP 1 Score: 341.7 bits (875), Expect = 7.7e-91
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1 

Query: 1   MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120

Query: 121 EERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGEDEAT 173
           EERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGEDEAT
Sbjct: 121 EERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGEDEAT 172

[Close]
BLAST of Cucsa.244640 vs. NCBI nr
Match: gi|659112331|ref|XP_008456169.1| (PREDICTED: PRKR-interacting protein 1 [Cucumis melo])

HSP 1 Score: 335.1 bits (858), Expect = 7.2e-89
Identity = 167/172 (97.09%), Postives = 171/172 (99.42%), Query Frame = 1 

Query: 1   MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDGERRLVIPMPPKPKP+TQLAT ESNALVEYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120

Query: 121 EERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGEDEAT 173
           EERT+KKRLKRQKKKQRRKEKRSK+NSGEDENQK+ESSDDEGDTDKGEDEAT
Sbjct: 121 EERTAKKRLKRQKKKQRRKEKRSKMNSGEDENQKEESSDDEGDTDKGEDEAT 172

[Close]
BLAST of Cucsa.244640 vs. NCBI nr
Match: gi|1012245655|ref|XP_015942138.1| (PREDICTED: PRKR-interacting protein 1 [Arachis duranensis])

HSP 1 Score: 245.0 bits (624), Expect = 9.8e-62
Identity = 130/173 (75.14%), Postives = 151/173 (87.28%), Query Frame = 1 

Query: 1   MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPV--KEEDEDLEVKLRRIID 60
           MSTGK KDG+ ++V  +P   KP   LA + SNALVEYT PV  KEE+EDLEVKLRRIID
Sbjct: 1   MSTGKPKDGDFQMVA-VPGSSKPP--LAPSSSNALVEYTTPVTFKEEEEDLEVKLRRIID 60

Query: 61  NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMK 120
           NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARM+VDYQK+KE+AEF MRREER+K
Sbjct: 61  NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQKRKELAEFKMRREERLK 120

Query: 121 AAEERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGEDEA 172
           AAEERT+KKR KRQKKKQR+KEK+ KLNSGE++ +K+++SDD GD+DK E+ A
Sbjct: 121 AAEERTAKKRAKRQKKKQRKKEKKMKLNSGEEQPEKEDTSDD-GDSDKDEEAA 169

[Close]
BLAST of Cucsa.244640 vs. NCBI nr
Match: gi|1021571496|ref|XP_016176890.1| (PREDICTED: PRKR-interacting protein 1 [Arachis ipaensis])

HSP 1 Score: 243.4 bits (620), Expect = 2.9e-61
Identity = 129/173 (74.57%), Postives = 150/173 (86.71%), Query Frame = 1 

Query: 1   MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPV--KEEDEDLEVKLRRIID 60
           MSTGK KDG+ ++V  +P   KP   LA + SNALVEYT PV  KEE+EDLEVKLRRIID
Sbjct: 1   MSTGKPKDGDFQMVA-VPGSSKPP--LAPSSSNALVEYTTPVTFKEEEEDLEVKLRRIID 60

Query: 61  NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMK 120
           NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARM+VDYQK+KE+ EF MRREER+K
Sbjct: 61  NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQKRKELTEFKMRREERLK 120

Query: 121 AAEERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGEDEA 172
           AAEERT+KKR KRQKKKQR+KEK+ KLNSGE++ +K+++SDD GD+DK E+ A
Sbjct: 121 AAEERTAKKRAKRQKKKQRKKEKKMKLNSGEEQPEKEDTSDD-GDSDKDEEAA 169

[Close]
BLAST of Cucsa.244640 vs. NCBI nr
Match: gi|802540316|ref|XP_012075843.1| (PREDICTED: PRKR-interacting protein 1 [Jatropha curcas])

HSP 1 Score: 241.9 bits (616), Expect = 8.3e-61
Identity = 126/179 (70.39%), Postives = 150/179 (83.80%), Query Frame = 1 

Query: 1   MSTGKLKDGERRLVIP-------MPPKPKPDTQLATAESNALVEYTPPV-KEEDEDLEVK 60
           MSTG+ KD + ++V+        +PP+P      A   S ALVEY+ PV KEE+EDLEVK
Sbjct: 1   MSTGRPKDSDLQVVVTPDKHVSGLPPRPPA----AGTASTALVEYSAPVFKEEEEDLEVK 60

Query: 61  LRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMR 120
           LRRII+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMD DYQK+KE+AEF+MR
Sbjct: 61  LRRIIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDADYQKRKELAEFSMR 120

Query: 121 REERMKAAEERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGEDEA 172
           REER+KAAEERT+KKRLKRQKKKQ++KEK+ KLN+G +E+QK+ESSDD+GD+D GE  A
Sbjct: 121 REERLKAAEERTAKKRLKRQKKKQKKKEKKVKLNAGGEEHQKEESSDDDGDSDTGEPAA 175

The following BLAST results are available for this feature:
BLAST of Cucsa.244640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PKRI1_MOUSE2.3e-1834.64PRKR-interacting protein 1 OS=Mus musculus GN=Prkrip1 PE=1 SV=2[more]
PKRI1_BOVIN2.5e-1735.63PRKR-interacting protein 1 OS=Bos taurus GN=PRKRIP1 PE=2 SV=1[more]
PKRI1_CHICK9.6e-1733.93PRKR-interacting protein 1 homolog OS=Gallus gallus GN=PRKRIP1 PE=2 SV=1[more]
PKRI1_HUMAN1.6e-1633.33PRKR-interacting protein 1 OS=Homo sapiens GN=PRKRIP1 PE=1 SV=1[more]
PKRI1_PONAB1.6e-1633.33PRKR-interacting protein 1 OS=Pongo abelii GN=PRKRIP1 PE=2 SV=1[more]
BLAST of Cucsa.244640 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L705_CUCSA5.4e-91100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G199600 PE=4 SV=1[more]
A0A067LM79_JATCU5.8e-6170.39Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15460 PE=4 SV=1[more]
B9RY95_RICCO9.9e-6169.49Expressed protein, putative OS=Ricinus communis GN=RCOM_0811390 PE=4 SV=1[more]
A0A0B0P818_GOSAR1.1e-5972.83PRKR-interacting 1 OS=Gossypium arboreum GN=F383_07187 PE=4 SV=1[more]
I1LEJ5_SOYBN1.4e-5970.93Uncharacterized protein OS=Glycine max GN=GLYMA_10G262200 PE=4 SV=1[more]
BLAST of Cucsa.244640 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G15270.11.8e-5059.89 unknown protein[more]
BLAST of Cucsa.244640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778680024|ref|XP_011651236.1|7.7e-91100.00PREDICTED: PRKR-interacting protein 1 [Cucumis sativus][more]
gi|659112331|ref|XP_008456169.1|7.2e-8997.09PREDICTED: PRKR-interacting protein 1 [Cucumis melo][more]
gi|1012245655|ref|XP_015942138.1|9.8e-6275.14PREDICTED: PRKR-interacting protein 1 [Arachis duranensis][more]
gi|1021571496|ref|XP_016176890.1|2.9e-6174.57PREDICTED: PRKR-interacting protein 1 [Arachis ipaensis][more]
gi|802540316|ref|XP_012075843.1|8.3e-6170.39PREDICTED: PRKR-interacting protein 1 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009548DUF1168
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.244640.1Cucsa.244640.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009548Protein of unknown function DUF1168PANTHERPTHR13507UNCHARACTERIZEDcoord: 2..171
score: 3.6
IPR009548Protein of unknown function DUF1168PFAMPF06658DUF1168coord: 54..168
score: 7.1
NoneNo IPR availableunknownCoilCoilcoord: 119..151
scor
NoneNo IPR availablePANTHERPTHR13507:SF0PRKR-INTERACTING PROTEIN 1coord: 2..171
score: 3.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.244640Cla013097Watermelon (97103) v1cgywmB462
Cucsa.244640Csa3G199600Cucumber (Chinese Long) v2cgycuB350
Cucsa.244640MELO3C019546Melon (DHL92) v3.5.1cgymeB417
Cucsa.244640ClCG05G010280Watermelon (Charleston Gray)cgywcgB433
Cucsa.244640CSPI03G18150Wild cucumber (PI 183967)cgycpiB366
Cucsa.244640CmaCh04G004720Cucurbita maxima (Rimu)cgycmaB0687
Cucsa.244640CmoCh04G005060Cucurbita moschata (Rifu)cgycmoB0687
Cucsa.244640Lsi05G002370Bottle gourd (USVL1VR-Ls)cgylsiB404
Cucsa.244640Cp4.1LG01g02410Cucurbita pepo (Zucchini)cgycpeB0654
Cucsa.244640MELO3C019546.2Melon (DHL92) v3.6.1cgymedB412
Cucsa.244640CsaV3_3G018210Cucumber (Chinese Long) v3cgycucB369
Cucsa.244640Cla97C05G092660Watermelon (97103) v2cgywmbB435
Cucsa.244640Bhi01G001281Wax gourdcgywgoB493
Cucsa.244640Carg08143Silver-seed gourdcarcgyB0436
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.244640Cucurbita pepo (Zucchini)cgycpeB0652
Cucsa.244640Bottle gourd (USVL1VR-Ls)cgylsiB403
Cucsa.244640Melon (DHL92) v3.6.1cgymedB411
Cucsa.244640Silver-seed gourdcarcgyB0345
Cucsa.244640Cucumber (Chinese Long) v3cgycucB370
Cucsa.244640Watermelon (97103) v2cgywmbB434
Cucsa.244640Wax gourdcgywgoB494
Cucsa.244640Cucumber (Gy14) v1cgycgyB117
Cucsa.244640Cucurbita maxima (Rimu)cgycmaB0684
Cucsa.244640Cucurbita maxima (Rimu)cgycmaB0685
Cucsa.244640Cucurbita moschata (Rifu)cgycmoB0684
Cucsa.244640Cucurbita moschata (Rifu)cgycmoB0685
Cucsa.244640Wild cucumber (PI 183967)cgycpiB367
Cucsa.244640Cucumber (Chinese Long) v2cgycuB351
Cucsa.244640Melon (DHL92) v3.5.1cgymeB416
Cucsa.244640Watermelon (Charleston Gray)cgywcgB432
Cucsa.244640Watermelon (97103) v1cgywmB463