CmoCh04G005060 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G005060
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPRKR-interacting 1
LocationCmo_Chr04 : 2514622 .. 2517114 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAACCGGCAAGCTGAAGGATGGAGACCGTCGGCTGGTGATTCCGATGCCCCCCAAACCGAAATCTGATACCCAGTTGGCGACAACCGAGTCGAACGCGCTTGTAGCGTATACGCCGCCGGTGAAGGAGGAGGATGAGGATTTGGAGGTCAAGCTCCGAAGAATCATCGATAATGTTCCTGTTCGTGTCAGCAACACGTCTGGAAGCTCTGCTGGTTCTGGTTCCGGTGATTTTCACCAGGTATTGAGTGATTTATGTTGTTTTATATTGCGTAAATTTTATTAGTGACTTCTGTCTGCGGTTTATTCTCTCGTGGGCGTGTTTTCATGATGAATGGATGTAAAATTGTACCAATGCATTACTGGGATTGGTTAGCAACGAGTGTGATTCCTATCTTAGGTCTTATGATATGAAACAAACTGGTTTCCGTACATTACAGGTTCTTTAAATTCTTGCGACTGTTAGCTGGTAATGAGTGGAAGAACTGATTATTGGGGGAATTAGGCTGGGTGTGAACAACAATATTTCCCTTACCAAAGGTCTGAAAATCCAAACTATTATTGAATGAGGAAGATGCCCCTTTCTTTGATGGAAATTTGAGTAAACAAAATTCCTAGATTGGGTTTAGCTCGTGGATGGTTTTTTTTTTTAATATATGGACGAAGGGGAGACATAGGATTGGTGTGATGATTACAAAAATGTTCATAAGCGAGTTGGAAAAGGTAGAATCCAAACCTGGCTAAAAGAGATAATCTACCTTGTAGGAGTGCAACTTTTAGATTTATGAGATCGGATGTTTGTAGATAATCGTAAAATCAGAACACCTAACTGGCTCATTGGGGTGGATTTGGAATTGTGTATTTGGCTCAAGTCGGATACAGGATAGTTGGTGTTCTTTTTAACTGGATGAAGCGTTTTTCATTGACCATGTTAAAATGCTGTTATCATGCGAGTGAAATACATATATTTGATCAAAATTTTCTGGGAGCATAATGAATTAATTGTTTGCTCACGCGGGAGTAGCATAGCAACTTAGCATTAACTATATGCTAGTTGGTTAGTACTTTCTTTACAATCAGTTAATGTCTTTGCTGAAGCTAGGACTTACTGGCTTCACCTTTTAGATTTTCACAGTGAAGAAAGTTTAAAATTATGGTGCTAGTCTGGTATTCAAAGCTGACTGCTGCCAAGCAGAATTTGATTTATTGGAGAGTTTGAAATTATACTAATTCTGACTGAGAGGAAGAAATGGATTGGAGCGATGATTGTTCCACGCACTCGAATTTACGTATGACCTATCAAAATCAGGTTGTTGTGGATATCATTAGGAAATAATGATCGTGGAGTAGCAGTAGTAGGTTGACAAGTACTCTGTTTGCAAGCAATGCTCTGAAATCTTAGCTCGTGAAAATGCATCGCTTGCTTTTGTTGGTTTTTGGTGTCATCTAAGAAGGGTTAATGTCATTTAATATAAGTCAAAGGACGAGGTTTATAAAAATACTGTTCGACGTGAAAGAAATTCTTTAGTCTGGTGTTAAATGGGTCTTTCATATTTCGAATCTTGATGTAGTTAAGAAAGGTAATGTATTACAATGGGGAATTGAAAGTTTTTACCTACTCAAACATCATCTGATGATTCTGATATGTGTTTAGGAAAGAAAGTCTCCACTTGTGTTGTTAAGCCTACAATTTTCACTTCAGATTGTAAATGCATAGGACCTTTTTGTTCGTGATTTTGTGGAGTCTGTCTCGATCGTTGAATATATATACTAATACGGGCCTGCCCATAAAATTTTCGAATGACAGTATAGGCAAATGAGGCGAAAAGAACAAGACAGACTTGCTAGAATGGACGTTGATTATCAGAAAAAGAAAGAAATAGCCGAATTCAATATGCGAAGGGAAGAACGGTTGAAAGCTGCCGAGGAACGCACTTCAAAGAAGCGACTAAAGCGTCAAAAGAAAAAGCAAAGAAGAAAAGAAAAGAAGAGCAAGTTGAATTCAAGCGGAGGAGATGAGAATCAGAAAGATGCATCCTCTGGTGATGAAGGGGATACCGATAATGGCGAGGATGAAGCAACATGACTCGTTATTCTCCACCCGGAATCGAAGTTTGAACTCTTAGCCTCGAGCTTTCAGACAAGCCATCTAACCGGAGACAGCTACCAGTACCTGGAATCTGGCTTTTGTGTTTTTATTGCAGGTGGGATTGGAAGAATGTTGGATTTGAATACACAATTCTCCCATCTTCCCACAGGACCTCTATCTTTCTCTCAATTGCATGGCGCTGAAATGTGTTAGCAGAATATCTATAACATTATTACATGTAGAACAGATGGACATAATATTAGTTGAGTCCAAGGGATACTCATGATTGTGTTATAACGATTCGTTGCTTATGATATATGAACAGAGGGGACGTTGATCTACGATCAGACCCTAACATGCTCGTAGAAACACCGACTATATCATTCATATTGAATGCTCATT

mRNA sequence

ATGTCAACCGGCAAGCTGAAGGATGGAGACCGTCGGCTGGTGATTCCGATGCCCCCCAAACCGAAATCTGATACCCAGTTGGCGACAACCGAGTCGAACGCGCTTGTAGCGTATACGCCGCCGGTGAAGGAGGAGGATGAGGATTTGGAGGTCAAGCTCCGAAGAATCATCGATAATGTTCCTGTTCGTGTCAGCAACACGTCTGGAAGCTCTGCTGGTTCTGGTTCCGGTGATTTTCACCAGTATAGGCAAATGAGGCGAAAAGAACAAGACAGACTTGCTAGAATGGACGTTGATTATCAGAAAAAGAAAGAAATAGCCGAATTCAATATGCGAAGGGAAGAACGGTTGAAAGCTGCCGAGGAACGCACTTCAAAGAAGCGACTAAAGCGTCAAAAGAAAAAGCAAAGAAGAAAAGAAAAGAAGAGCAAGTTGAATTCAAGCGGAGGAGATGAGAATCAGAAAGATGCATCCTCTGGTGATGAAGGGGATACCGATAATGGCGAGGATGAAGCAACATGACTCGTTATTCTCCACCCGGAATCGAAGTTTGAACTCTTAGCCTCGAGCTTTCAGACAAGCCATCTAACCGGAGACAGCTACCAGTACCTGGAATCTGGCTTTTGTGTTTTTATTGCAGGTGGGATTGGAAGAATGTTGGATTTGAATACACAATTCTCCCATCTTCCCACAGGACCTCTATCTTTCTCTCAATTGCATGGCGCTGAAATGTGTTAGCAGAATATCTATAACATTATTACATGTAGAACAGATGGACATAATATTAGTTGAGTCCAAGGGATACTCATGATTGTGTTATAACGATTCGTTGCTTATGATATATGAACAGAGGGGACGTTGATCTACGATCAGACCCTAACATGCTCGTAGAAACACCGACTATATCATTCATATTGAATGCTCATT

Coding sequence (CDS)

ATGTCAACCGGCAAGCTGAAGGATGGAGACCGTCGGCTGGTGATTCCGATGCCCCCCAAACCGAAATCTGATACCCAGTTGGCGACAACCGAGTCGAACGCGCTTGTAGCGTATACGCCGCCGGTGAAGGAGGAGGATGAGGATTTGGAGGTCAAGCTCCGAAGAATCATCGATAATGTTCCTGTTCGTGTCAGCAACACGTCTGGAAGCTCTGCTGGTTCTGGTTCCGGTGATTTTCACCAGTATAGGCAAATGAGGCGAAAAGAACAAGACAGACTTGCTAGAATGGACGTTGATTATCAGAAAAAGAAAGAAATAGCCGAATTCAATATGCGAAGGGAAGAACGGTTGAAAGCTGCCGAGGAACGCACTTCAAAGAAGCGACTAAAGCGTCAAAAGAAAAAGCAAAGAAGAAAAGAAAAGAAGAGCAAGTTGAATTCAAGCGGAGGAGATGAGAATCAGAAAGATGCATCCTCTGGTGATGAAGGGGATACCGATAATGGCGAGGATGAAGCAACATGA
Homology
[Close]
BLAST of CmoCh04G005060 vs. Swiss-Prot
Match: PKRI1_BOVIN (PRKR-interacting protein 1 OS=Bos taurus GN=PRKRIP1 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.4e-07
Identity = 67/179 (37.43%), Postives = 89/179 (49.72%), Query Frame = 1 

Query: 18  PPKPKSDTQLATTESNALVAYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK + Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQALIIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMSEWAPRP 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E    A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLEAEFQKRLERNKIA 130

Query: 138 AEERTSKKRLKRQKKKQRR-KEKKSKL----NSSGGDENQKDASSGDE---GDTDNGED 171
           AEE+T+K+R KRQK K+++   KK KL     S    E Q+  SSG E   G  D  ED
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQSEASSETQEQPSSGSEEASGTEDEEED 178

[Close]
BLAST of CmoCh04G005060 vs. Swiss-Prot
Match: PKRI1_MOUSE (PRKR-interacting protein 1 OS=Mus musculus GN=Prkrip1 PE=1 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 5.3e-07
Identity = 64/178 (35.96%), Postives = 89/178 (50.00%), Query Frame = 1 

Query: 18  PPKPKSDTQLATTESNALVAYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK + Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQTLVIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMNEWAPRA 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E+   A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIA 130

Query: 138 AEERTSKKRLKRQKKKQRR-KEKKSKLNSSGGDE-----NQKDASSGDEGDTDNGEDE 172
           AEE+T+K+R KRQK K+++   KK KL      E      ++ ASS DE      E+E
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQKEEPSQCQEQHASSSDEASETEEEEE 177

[Close]
BLAST of CmoCh04G005060 vs. Swiss-Prot
Match: PKRI1_HUMAN (PRKR-interacting protein 1 OS=Homo sapiens GN=PRKRIP1 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.0e-07
Identity = 60/177 (33.90%), Postives = 89/177 (50.28%), Query Frame = 1 

Query: 18  PPKPKSDTQLATTESNALVAYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK + Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQTLVIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMSEWAPRP 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E+   A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIA 130

Query: 138 AEERTSKKRLKRQKKKQRR------KEKKSKLNSSGGDENQKDASSGDEGDTDNGED 171
           AEE+T+K+R KRQK K+++      K ++ K    G  + Q  +SS +   T+  E+
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQEGPGQPKEQGSSSSAEASGTEEEEE 176

[Close]
BLAST of CmoCh04G005060 vs. Swiss-Prot
Match: PKRI1_PONAB (PRKR-interacting protein 1 OS=Pongo abelii GN=PRKRIP1 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.0e-07
Identity = 60/177 (33.90%), Postives = 89/177 (50.28%), Query Frame = 1 

Query: 18  PPKPKSDTQLATTESNALVAYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK + Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQTLVIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMSEWAPRP 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E+   A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIA 130

Query: 138 AEERTSKKRLKRQKKKQRR------KEKKSKLNSSGGDENQKDASSGDEGDTDNGED 171
           AEE+T+K+R KRQK K+++      K ++ K    G  + Q  +SS +   T+  E+
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQEGPGQPKEQGSSSSAEASGTEEEEE 176

[Close]
BLAST of CmoCh04G005060 vs. TrEMBL
Match: A0A0A0L705_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G199600 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.3e-73
Identity = 162/173 (93.64%), Postives = 165/173 (95.38%), Query Frame = 1 

Query: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTESNALVAYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDG+RRLVIPMPPKPK DTQLAT ESNALV YTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREER+KAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120

Query: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSSGGDENQKDASSGDEGDTDNGEDEAT 174
           EERTSKKRLKRQKKKQRRKEK+SKLN SG DENQKD SS DEGDTD GEDEAT
Sbjct: 121 EERTSKKRLKRQKKKQRRKEKRSKLN-SGEDENQKDESSDDEGDTDKGEDEAT 172

[Close]
BLAST of CmoCh04G005060 vs. TrEMBL
Match: A0A067LM79_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15460 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.7e-50
Identity = 128/180 (71.11%), Postives = 150/180 (83.33%), Query Frame = 1 

Query: 1   MSTGKLKDGDRRLVIP-------MPPKPKSDTQLATTESNALVAYTPPV-KEEDEDLEVK 60
           MSTG+ KD D ++V+        +PP+P +    A T S ALV Y+ PV KEE+EDLEVK
Sbjct: 1   MSTGRPKDSDLQVVVTPDKHVSGLPPRPPA----AGTASTALVEYSAPVFKEEEEDLEVK 60

Query: 61  LRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMR 120
           LRRII+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMD DYQK+KE+AEF+MR
Sbjct: 61  LRRIIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDADYQKRKELAEFSMR 120

Query: 121 REERLKAAEERTSKKRLKRQKKKQRRKEKKSKLNSSGGDENQKDASSGDEGDTDNGEDEA 173
           REERLKAAEERT+KKRLKRQKKKQ++KEKK KLN +GG+E+QK+ SS D+GD+D GE  A
Sbjct: 121 REERLKAAEERTAKKRLKRQKKKQKKKEKKVKLN-AGGEEHQKEESSDDDGDSDTGEPAA 175

[Close]
BLAST of CmoCh04G005060 vs. TrEMBL
Match: A0A0B0P818_GOSAR (PRKR-interacting 1 OS=Gossypium arboreum GN=F383_07187 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 3.5e-50
Identity = 130/179 (72.63%), Postives = 148/179 (82.68%), Query Frame = 1 

Query: 1   MSTGKLKDGDRRLVIP-----MPPKPKSDTQLATTESNALVAYTPPV-KEEDEDLEVKLR 60
           MSTG+ KDGD +L +      +PP+P S T      S A+V Y  P  KEE+EDLEVKLR
Sbjct: 1   MSTGRPKDGDTQLAVVEPKSGLPPRPPSTT------STAIVEYEKPAFKEEEEDLEVKLR 60

Query: 61  RIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRRE 120
           RII+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQK+KEIAEFNMRRE
Sbjct: 61  RIIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKRKEIAEFNMRRE 120

Query: 121 ERLKAAEERTSKKRLKRQKKKQRRKEKKSKLNSSGGDENQKDASSGDEGDTDNGEDEAT 174
           ERLKAAEERT+KKRLKRQKKKQR+KEKK KL++ GG EN+K+ SS DE D+++  DEAT
Sbjct: 121 ERLKAAEERTAKKRLKRQKKKQRKKEKKMKLSAEGG-ENKKEESSDDEADSEH--DEAT 170

[Close]
BLAST of CmoCh04G005060 vs. TrEMBL
Match: B9RY95_RICCO (Expressed protein, putative OS=Ricinus communis GN=RCOM_0811390 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.6e-50
Identity = 125/178 (70.22%), Postives = 148/178 (83.15%), Query Frame = 1 

Query: 1   MSTGKLKDGDRRLVIP-------MPPKPKSDTQLATTESNALVAYTPPV-KEEDEDLEVK 60
           MSTG+ +D D +L++        +PP+P        T S ALV YT P+ KEE+EDLEVK
Sbjct: 1   MSTGRPEDNDLQLMVQPEKPKPALPPRPLVAAMGTGTGSTALVEYTAPMLKEEEEDLEVK 60

Query: 61  LRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMR 120
           LRRII+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARM+VDYQK+KE+AEFNMR
Sbjct: 61  LRRIIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQKRKELAEFNMR 120

Query: 121 REERLKAAEERTSKKRLKRQKKKQRRKEKKSKLNSSGGDENQKDASSGDEGDTDNGED 171
           REE+LKAAEERT+KKRLKRQ+KKQR+KEKK K+N +GG+E QK  SS DEGD+D+GE+
Sbjct: 121 REEKLKAAEERTAKKRLKRQRKKQRKKEKKMKVN-AGGEEQQKHESSDDEGDSDDGEE 177

[Close]
BLAST of CmoCh04G005060 vs. TrEMBL
Match: A0A0D2RKD2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G235000 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-49
Identity = 129/179 (72.07%), Postives = 147/179 (82.12%), Query Frame = 1 

Query: 1   MSTGKLKDGDRRLVIP-----MPPKPKSDTQLATTESNALVAYTPPV-KEEDEDLEVKLR 60
           MSTG+ KDGD +L +      +PP+P S T      S A+V Y  P  KEE+EDLEVKLR
Sbjct: 1   MSTGRPKDGDTQLAVVEPKSGLPPRPPSTT------STAIVEYEKPAFKEEEEDLEVKLR 60

Query: 61  RIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRRE 120
           RII+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQK+KEIAEFNMRRE
Sbjct: 61  RIIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKRKEIAEFNMRRE 120

Query: 121 ERLKAAEERTSKKRLKRQKKKQRRKEKKSKLNSSGGDENQKDASSGDEGDTDNGEDEAT 174
           ERLKAAEERT+KKRLKRQKKKQR+KEKK K ++ GG EN+K+ SS DE D+++  DEAT
Sbjct: 121 ERLKAAEERTAKKRLKRQKKKQRKKEKKMKSSAEGG-ENKKEESSDDEADSEH--DEAT 170

[Close]
BLAST of CmoCh04G005060 vs. TAIR10
Match: AT2G15270.1 (AT2G15270.1 unknown protein)

HSP 1 Score: 162.5 bits (410), Expect = 2.3e-40
Identity = 109/180 (60.56%), Postives = 134/180 (74.44%), Query Frame = 1 

Query: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTE--------SNALVAYTPPVK-EEDEDLEV 60
           MS+GK K GD RLV+       + T  A  E        S+++V Y PPV  E++EDLEV
Sbjct: 1   MSSGKPKQGDTRLVVA------ATTASALMEAKKADHGGSSSIVEYKPPVMLEDEEDLEV 60

Query: 61  KLRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNM 120
           KLRRI++NVPVRVSNTSGSSAGSGSGDFHQYRQMRR+EQDRL RMD+DY K+ ++AEF +
Sbjct: 61  KLRRILENVPVRVSNTSGSSAGSGSGDFHQYRQMRRREQDRLTRMDIDYNKRLKMAEFTI 120

Query: 121 RREERLKAAEERTSKKRLKRQKKKQRRKEKKSKLNSSGGDENQKDASSGDEGDTDNGEDE 172
           RREE+ KAAEE+TSKKRLKRQKKKQ+++EKK K N++  +E  K    G E  +D GEDE
Sbjct: 121 RREEKQKAAEEKTSKKRLKRQKKKQKKQEKKQKPNTT--EEEVKQPRVG-EISSDEGEDE 171

[Close]
BLAST of CmoCh04G005060 vs. NCBI nr
Match: gi|778680024|ref|XP_011651236.1| (PREDICTED: PRKR-interacting protein 1 [Cucumis sativus])

HSP 1 Score: 283.9 bits (725), Expect = 1.9e-73
Identity = 162/173 (93.64%), Postives = 165/173 (95.38%), Query Frame = 1 

Query: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTESNALVAYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDG+RRLVIPMPPKPK DTQLAT ESNALV YTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREER+KAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120

Query: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSSGGDENQKDASSGDEGDTDNGEDEAT 174
           EERTSKKRLKRQKKKQRRKEK+SKLN SG DENQKD SS DEGDTD GEDEAT
Sbjct: 121 EERTSKKRLKRQKKKQRRKEKRSKLN-SGEDENQKDESSDDEGDTDKGEDEAT 172

[Close]
BLAST of CmoCh04G005060 vs. NCBI nr
Match: gi|659112331|ref|XP_008456169.1| (PREDICTED: PRKR-interacting protein 1 [Cucumis melo])

HSP 1 Score: 280.8 bits (717), Expect = 1.6e-72
Identity = 159/173 (91.91%), Postives = 166/173 (95.95%), Query Frame = 1 

Query: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTESNALVAYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDG+RRLVIPMPPKPK +TQLATTESNALV YTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREER+KAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120

Query: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSSGGDENQKDASSGDEGDTDNGEDEAT 174
           EERT+KKRLKRQKKKQRRKEK+SK+N SG DENQK+ SS DEGDTD GEDEAT
Sbjct: 121 EERTAKKRLKRQKKKQRRKEKRSKMN-SGEDENQKEESSDDEGDTDKGEDEAT 172

[Close]
BLAST of CmoCh04G005060 vs. NCBI nr
Match: gi|802540316|ref|XP_012075843.1| (PREDICTED: PRKR-interacting protein 1 [Jatropha curcas])

HSP 1 Score: 206.5 bits (524), Expect = 3.9e-50
Identity = 128/180 (71.11%), Postives = 150/180 (83.33%), Query Frame = 1 

Query: 1   MSTGKLKDGDRRLVIP-------MPPKPKSDTQLATTESNALVAYTPPV-KEEDEDLEVK 60
           MSTG+ KD D ++V+        +PP+P +    A T S ALV Y+ PV KEE+EDLEVK
Sbjct: 1   MSTGRPKDSDLQVVVTPDKHVSGLPPRPPA----AGTASTALVEYSAPVFKEEEEDLEVK 60

Query: 61  LRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMR 120
           LRRII+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMD DYQK+KE+AEF+MR
Sbjct: 61  LRRIIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDADYQKRKELAEFSMR 120

Query: 121 REERLKAAEERTSKKRLKRQKKKQRRKEKKSKLNSSGGDENQKDASSGDEGDTDNGEDEA 173
           REERLKAAEERT+KKRLKRQKKKQ++KEKK KLN +GG+E+QK+ SS D+GD+D GE  A
Sbjct: 121 REERLKAAEERTAKKRLKRQKKKQKKKEKKVKLN-AGGEEHQKEESSDDDGDSDTGEPAA 175

[Close]
BLAST of CmoCh04G005060 vs. NCBI nr
Match: gi|728841762|gb|KHG21205.1| (PRKR-interacting 1 [Gossypium arboreum])

HSP 1 Score: 206.1 bits (523), Expect = 5.1e-50
Identity = 130/179 (72.63%), Postives = 148/179 (82.68%), Query Frame = 1 

Query: 1   MSTGKLKDGDRRLVIP-----MPPKPKSDTQLATTESNALVAYTPPV-KEEDEDLEVKLR 60
           MSTG+ KDGD +L +      +PP+P S T      S A+V Y  P  KEE+EDLEVKLR
Sbjct: 1   MSTGRPKDGDTQLAVVEPKSGLPPRPPSTT------STAIVEYEKPAFKEEEEDLEVKLR 60

Query: 61  RIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRRE 120
           RII+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQK+KEIAEFNMRRE
Sbjct: 61  RIIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKRKEIAEFNMRRE 120

Query: 121 ERLKAAEERTSKKRLKRQKKKQRRKEKKSKLNSSGGDENQKDASSGDEGDTDNGEDEAT 174
           ERLKAAEERT+KKRLKRQKKKQR+KEKK KL++ GG EN+K+ SS DE D+++  DEAT
Sbjct: 121 ERLKAAEERTAKKRLKRQKKKQRKKEKKMKLSAEGG-ENKKEESSDDEADSEH--DEAT 170

[Close]
BLAST of CmoCh04G005060 vs. NCBI nr
Match: gi|255555285|ref|XP_002518679.1| (PREDICTED: PRKR-interacting protein 1 [Ricinus communis])

HSP 1 Score: 205.7 bits (522), Expect = 6.6e-50
Identity = 125/178 (70.22%), Postives = 148/178 (83.15%), Query Frame = 1 

Query: 1   MSTGKLKDGDRRLVIP-------MPPKPKSDTQLATTESNALVAYTPPV-KEEDEDLEVK 60
           MSTG+ +D D +L++        +PP+P        T S ALV YT P+ KEE+EDLEVK
Sbjct: 1   MSTGRPEDNDLQLMVQPEKPKPALPPRPLVAAMGTGTGSTALVEYTAPMLKEEEEDLEVK 60

Query: 61  LRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMR 120
           LRRII+NVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARM+VDYQK+KE+AEFNMR
Sbjct: 61  LRRIIENVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQKRKELAEFNMR 120

Query: 121 REERLKAAEERTSKKRLKRQKKKQRRKEKKSKLNSSGGDENQKDASSGDEGDTDNGED 171
           REE+LKAAEERT+KKRLKRQ+KKQR+KEKK K+N +GG+E QK  SS DEGD+D+GE+
Sbjct: 121 REEKLKAAEERTAKKRLKRQRKKQRKKEKKMKVN-AGGEEQQKHESSDDEGDSDDGEE 177

The following BLAST results are available for this feature:
BLAST of CmoCh04G005060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PKRI1_BOVIN1.4e-0737.43PRKR-interacting protein 1 OS=Bos taurus GN=PRKRIP1 PE=2 SV=1[more]
PKRI1_MOUSE5.3e-0735.96PRKR-interacting protein 1 OS=Mus musculus GN=Prkrip1 PE=1 SV=2[more]
PKRI1_HUMAN9.0e-0733.90PRKR-interacting protein 1 OS=Homo sapiens GN=PRKRIP1 PE=1 SV=1[more]
PKRI1_PONAB9.0e-0733.90PRKR-interacting protein 1 OS=Pongo abelii GN=PRKRIP1 PE=2 SV=1[more]
BLAST of CmoCh04G005060 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L705_CUCSA1.3e-7393.64Uncharacterized protein OS=Cucumis sativus GN=Csa_3G199600 PE=4 SV=1[more]
A0A067LM79_JATCU2.7e-5071.11Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15460 PE=4 SV=1[more]
A0A0B0P818_GOSAR3.5e-5072.63PRKR-interacting 1 OS=Gossypium arboreum GN=F383_07187 PE=4 SV=1[more]
B9RY95_RICCO4.6e-5070.22Expressed protein, putative OS=Ricinus communis GN=RCOM_0811390 PE=4 SV=1[more]
A0A0D2RKD2_GOSRA1.7e-4972.07Uncharacterized protein OS=Gossypium raimondii GN=B456_005G235000 PE=4 SV=1[more]
BLAST of CmoCh04G005060 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G15270.12.3e-4060.56 unknown protein[more]
BLAST of CmoCh04G005060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778680024|ref|XP_011651236.1|1.9e-7393.64PREDICTED: PRKR-interacting protein 1 [Cucumis sativus][more]
gi|659112331|ref|XP_008456169.1|1.6e-7291.91PREDICTED: PRKR-interacting protein 1 [Cucumis melo][more]
gi|802540316|ref|XP_012075843.1|3.9e-5071.11PREDICTED: PRKR-interacting protein 1 [Jatropha curcas][more]
gi|728841762|gb|KHG21205.1|5.1e-5072.63PRKR-interacting 1 [Gossypium arboreum][more]
gi|255555285|ref|XP_002518679.1|6.6e-5070.22PREDICTED: PRKR-interacting protein 1 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009548DUF1168
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006469 negative regulation of protein kinase activity
cellular_component GO:0005575 cellular_component
cellular_component GO:0005730 nucleolus
molecular_function GO:0003674 molecular_function
molecular_function GO:0003725 double-stranded RNA binding
molecular_function GO:0019901 protein kinase binding
molecular_function GO:0004860 protein kinase inhibitor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G005060.1CmoCh04G005060.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009548Protein of unknown function DUF1168PANTHERPTHR13507UNCHARACTERIZEDcoord: 2..172
score: 2.5
IPR009548Protein of unknown function DUF1168PFAMPF06658DUF1168coord: 54..170
score: 1.0
NoneNo IPR availableunknownCoilCoilcoord: 112..146
scor
NoneNo IPR availablePANTHERPTHR13507:SF0PRKR-INTERACTING PROTEIN 1coord: 2..172
score: 2.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G005060Cucsa.244640Cucumber (Gy14) v1cgycmoB0687
CmoCh04G005060CmaCh04G004720Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G005060Cla013097Watermelon (97103) v1cmowmB699
CmoCh04G005060Csa3G199600Cucumber (Chinese Long) v2cmocuB687
CmoCh04G005060MELO3C019546Melon (DHL92) v3.5.1cmomeB683
CmoCh04G005060ClCG05G010280Watermelon (Charleston Gray)cmowcgB660
CmoCh04G005060CSPI03G18150Wild cucumber (PI 183967)cmocpiB698
CmoCh04G005060Lsi05G002370Bottle gourd (USVL1VR-Ls)cmolsiB683
CmoCh04G005060Cp4.1LG01g02410Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G005060MELO3C019546.2Melon (DHL92) v3.6.1cmomedB774
CmoCh04G005060CsaV3_3G018210Cucumber (Chinese Long) v3cmocucB0814
CmoCh04G005060Cla97C05G092660Watermelon (97103) v2cmowmbB735
CmoCh04G005060Bhi01G001281Wax gourdcmowgoB0849
CmoCh04G005060CsGy3G018040Cucumber (Gy14) v2cgybcmoB386
CmoCh04G005060Carg08143Silver-seed gourdcarcmoB0514
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G005060Melon (DHL92) v3.5.1cmomeB665
CmoCh04G005060Melon (DHL92) v3.5.1cmomeB703
CmoCh04G005060Watermelon (Charleston Gray)cmowcgB645
CmoCh04G005060Watermelon (97103) v1cmowmB721
CmoCh04G005060Cucurbita pepo (Zucchini)cmocpeB668
CmoCh04G005060Cucurbita pepo (Zucchini)cmocpeB703
CmoCh04G005060Bottle gourd (USVL1VR-Ls)cmolsiB627
CmoCh04G005060Bottle gourd (USVL1VR-Ls)cmolsiB650
CmoCh04G005060Bottle gourd (USVL1VR-Ls)cmolsiB666
CmoCh04G005060Bottle gourd (USVL1VR-Ls)cmolsiB701
CmoCh04G005060Cucumber (Gy14) v2cgybcmoB235
CmoCh04G005060Cucumber (Gy14) v2cgybcmoB527
CmoCh04G005060Cucumber (Gy14) v2cgybcmoB822
CmoCh04G005060Cucumber (Gy14) v2cgybcmoB949
CmoCh04G005060Melon (DHL92) v3.6.1cmomedB751
CmoCh04G005060Melon (DHL92) v3.6.1cmomedB765
CmoCh04G005060Melon (DHL92) v3.6.1cmomedB783
CmoCh04G005060Melon (DHL92) v3.6.1cmomedB800
CmoCh04G005060Silver-seed gourdcarcmoB0403
CmoCh04G005060Silver-seed gourdcarcmoB0616
CmoCh04G005060Cucumber (Chinese Long) v3cmocucB0811
CmoCh04G005060Cucumber (Chinese Long) v3cmocucB0839
CmoCh04G005060Cucumber (Chinese Long) v3cmocucB0905
CmoCh04G005060Cucumber (Chinese Long) v3cmocucB0910
CmoCh04G005060Watermelon (97103) v2cmowmbB717
CmoCh04G005060Watermelon (97103) v2cmowmbB742
CmoCh04G005060Watermelon (97103) v2cmowmbB766
CmoCh04G005060Wax gourdcmowgoB0856
CmoCh04G005060Wax gourdcmowgoB0872
CmoCh04G005060Wax gourdcmowgoB0880
CmoCh04G005060Wax gourdcmowgoB0916
CmoCh04G005060Cucurbita moschata (Rifu)cmocmoB125
CmoCh04G005060Cucurbita moschata (Rifu)cmocmoB286
CmoCh04G005060Cucurbita moschata (Rifu)cmocmoB395
CmoCh04G005060Cucurbita moschata (Rifu)cmocmoB477
CmoCh04G005060Cucumber (Gy14) v1cgycmoB0228
CmoCh04G005060Cucumber (Gy14) v1cgycmoB0632
CmoCh04G005060Cucurbita maxima (Rimu)cmacmoB156
CmoCh04G005060Cucurbita maxima (Rimu)cmacmoB338
CmoCh04G005060Cucurbita maxima (Rimu)cmacmoB530
CmoCh04G005060Wild cucumber (PI 183967)cmocpiB777
CmoCh04G005060Cucumber (Chinese Long) v2cmocuB766
CmoCh04G005060Cucumber (Chinese Long) v2cmocuB769