CmoCh18G008450 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh18G008450
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionOxidoreductase/ transition metal ion binding protein
LocationCmo_Chr18 : 9808184 .. 9812477 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCCTCGCCAACAAATCGGTAATTCCATAAGCTATAGTGGCCTTGGAAAGGATAAACTGGTAATTTTATACGCTAATTCATTAAGATGTCCAAAATTTAGGTCATACACCACAAAGAAGAAAATAAATAAATAAGGAAATCGCAGGTGACAGGATATTTAAGAGCTTTTCGAATGGATAATAACCGTAATTTCCAAATTTGTTTGCTAACGAGGGATTCATCGTCGTTCGCAAGGAGAACTAGTGCGAGAGTTTCTGAAGAACAAGCTGGTAAAGGGAAGAACAAGAGAATGTCCGTGTTCGAGAGCATCGGACTAGGGTTGGCTTTTCGAAATGCTGCTTCCACTTGCAACTTTCTATCTAATCCAGGAATCTTCCTCAAATCTGTTGCTTCAAACCGTGAATTTCAGCAAATTTCACTTCGTTCTCGTGCTATGCTTTCTGAAAATGGCCATGAATCTATGTTCGATGCCAAGAGTGCTTCTACACCGACTGCAACCGACGCCCAGGGCTCTGGAACCACTGCTAGAAGTCGTCGATTGCTTAAGCTTCGTGAAGAGAAGCGAAAACGGGAGCATGATCGTCTCCACAATTATCCTGCCTGGGCGAAGTCTCTCTCTCTCTCTCTCTCTCTTTTCTGTATGATTGTGTGTTAGCATTTTTTTTTTTTAGTGTATTCGATTGATAATGAAATCGCCGGTAAAACGACAGAGTGTTAGAAGATGCCTGCAAAAACGATGCGGAATTACGCGCTGTTCTTGGCGATAGCATTGGCAATCCAGAGGAAATGAGGAAAAAGGTATATCGATTTGGCTGATATTCATCTTCTTCAAACATTTTCTGCTTCCAGCTTTTGATATTGTGTCAGTTTTTTTAATCTATTTTTCAGATTTCTTCACTTCATTTTGAGTGACAAGAAACCTTAAGAAAATGCTTAAAACTTGTTTGCAGTATATTCGCGATGTAGGATTTAATGTTTTCTTGATATATTCTTTATTCATCGGTATGATGTCTTAGAAGATAAGCTTGCGTCGAGTAGGACTATCATTATATCTTGTTGATATAGTTGAATATAATTTGGTTGGTCCAACATTTTCTGAGTATTGGTGCGTACTATCATGAACGGATGCAGATGATATCACGGAAGCTAGGAAAATGTTATTTCTGGATAATCAACAGGATTACTTTATTAGTTGCCGTTTCATAAGTTGCTCATTTGATTTATATTCTAGTATTGGCTCTTTATATTATATTCTTCCAAGATCAACTTAATTATCACACAACATTTTGCTGGAGAAGTTTCTCATATGACTAATAATTCATATACAAATGTGTTGTTCATCAACTTATTTCGCATCTATTGTCAGTCACGAGCCATTAGCTTCTTACTAGAGTTTCAAAACCAATCTGAATCTCATGTATTAAACACTTGTCCGTGTTGCCATTCACATAAGTGATAGAACTGATGAACAGAATAAGCTTGTTTCTCTGAGGTATCAGGCAGTAGAGATAAAACTTCTAAATCTTTTCCATGCAATTCCTGTTAAAAAATGGCATTTTCTTATTTTTGTGCTTGATTACATCTTACAATGTGATTGTGGCAGGTTGAAGAGAGAGTTCGGAGGAAGGGTAGAGATTTCACAAAGTCTAAAACGGGTTCCATCCTTGCCTTCAAAGTCAGCTTTAGAGAGTAATTTTTTTTTTATATAAACGCCCCTTACTTGTTTATCATCCTTTTTGGTCCTCACTAGTATTAGCTCATTTCCAGCGCCAAAATCAAATCCTAGTTCTCCATAATACAAGAAAAGATTTCACCACATTGCCAATTCCATTTTTTCTTGCAATGAACCGTTACTTATCAAATGTGAATTTGTTCTTCTCAATTGCTCAGGTTTCGAATCTCTTTTGAAAAAAAATGTTTAAAACCTGAAAGGTAGTGTTAATTCAACAAGTTCTCCTTTAAAGAAAGCTGTATCTTAATTAAATAAGTTTTTAGTATGGCTTCCTTACATGATAGGATTTTGTTTCAACTTTGGGTTTTCCAAATGTGCAAGTCATGAATTTTTTTGACGTGTTGGTTTACTTTTTTGAATATAGTTACTGCTTTATGGGTACTGGCAGTATCATGGTTAAATGATGCTTTTCTTACCTTATCAGCTGATATGAGGATGGGAATATGCATTCTCGTTATTTAGACCGTATTTGATTACCATTTGATTTTTGGTTTTTGAAAATTATGCTTGTTTTCCTATCATTTCTCTACAATCCCAGGATACAGTGATATTGGAGTTCTGCTAACTTCAAACATCCTCTGTGGCTGATTTTGTCCTCGTTTCTCGATTAACTGATTTTTAAGTTTAACCATGGTTTTTTCCACACTTAACGTTTATTTATACCTGTACGCTGTGTCTGGTGAATCTTTTAGGCATCCTTAAGCTGCTAATGAATTGAAAATTATGTTGATGTGGTGGCAAATTGTTCGTAAGACGTTCGAACTTTACCATTTTAAGTAACTAACCATCCTTTTTCCCTCTGTTTTTCTGCATAGCTTCAATCCTCTCGATTCCTACATATGGTTTGAGTTGATTGGATCACCATCTGATCGAGATGTTGATCTTATTGGCAGTGTAAGTTAATTCTTATTGCCATAGAATGGTTTTCTTTATCAGAATTTTTCTTTTCCTTGACCCGCTTAAACTTTGAAAATGACCATCTTCCACTTTCGCGCGACTCTCAGTGCATCCCTGAATGACTCTTAGCTTTCCTTGTATTCTGTATTACTTACATTCCAAGTAACCATGCAGGTTATCCAGTCATGGTACGTCATGGGTCGATTGGGGGCCTTCAACTCTTCAAATTTACAGGTTAATTCATATACCTTTTAACCTAATTGATTTATTCTTCATTAAAGTGTCCTACCCTTGTTAAATTACCAGTCAACCCAACATCTTAAACTCGTGTTAAATTTAATTATATCAACATTCCAACACCTCCCCTCACTTATAGGCTTGAAAATTTGTAGAAGGCCCAACAAGACCTCTCTAATAGTTAAATCATTAATCAACCCAAAAGCTTAAGCTTATGTATTATGGTAATTTAATTATATCAACCCTCCAACAACCCTAATGATCTGAAGCCAATTACATTTCCTTTTTTTTTTTTTTTTACCTATATCACAAATCAAAATTAATTCTCTTGTTAATTTCATTACTTATATATATATTCGAATGAGGGAAGGCCTTTTAGCCAGTGTTTTCATTATTTTCACTTGACTTTTTGACGTGTGGGGATAACATTTACATTATGAATGTATCACACAACTACTTAATTGTTTTATCAGCTTTATATGGATGAAAGTAGGTTCTCTAGATCTTTTCTCTAGATCTCACTATTTATTTATTTATTTGAAAAGGAAAAACACGTTCAATTGCATATGAAATTGGTTATTTAGAAGCCAATTCCTGATTCCTTTCCAAAGAAAAGGATAGCTCAACCAACCTGTTTAGGTGGCCTGTCTCTCACACCTCCCTCCTAAGACTTAATGGGACCAAATCTAGAGCTGCTGAGTGAATTGCTAAATAGTTGGAATAAAAACTTCATTGAATCATTATTCGAACTCACACGAGAAAGTAATTGCAGGTGGCGAATTCATCGATGGAGTACAATCCTGTGTATGACGCAGAAAAAGGGTTTAAAGTGATGCAGTCATCATTTCATGATATCAGTGATGTTGAGTTTCAGGACAACTGGGGCCGAGTTTGGTAAGAGTTCTTGGAATTAACTGTGTTTCCATTGTTCAATCTCAATGTGGAAAATTCAAACAAGTTGTGCAATAATGTGTGGCAGGGTCGACCTCGGTACGTCTGATTATTTGGCCATTGATGTACTTTTGAACTGTTTGACTGTTCTGAGCTCAGAGTAAGTTTGTTTTCTGGACGAATACTTGTAAAGATTATAAAGGTTATAGGTATGCATCTAATTAAGGAACTTGTTGACTTTCTCACTTTGAGCTACAGATATTTAGGCATCCAACAAGTCGTTTTCGGGGGACGTCGAATGGGCGATTGGGAAGAAGGAATGACAAGCCCCGAATTCGGGTACAAGTTTTTCAAAGTCTAACTTCTTTTCAATCAACATTTTCAAGCTACGTGTATATAATGCTCTAAATGGTAACTAACAATTTATGTCCTTAGCAGCTCTAAATTTCCAGGAATTAGTCCCTATTTTTCTAAGTTCCAATCCCAATAAGGAAAATGAATAATTTATAACAAAGTTTTAGTGTTATTGATTCTTAG

mRNA sequence

GGCCTCGCCAACAAATCGGTAATTCCATAAGCTATAGTGGCCTTGGAAAGGATAAACTGGTAATTTTATACGCTAATTCATTAAGATGTCCAAAATTTAGGTCATACACCACAAAGAAGAAAATAAATAAATAAGGAAATCGCAGGTGACAGGATATTTAAGAGCTTTTCGAATGGATAATAACCGTAATTTCCAAATTTGTTTGCTAACGAGGGATTCATCGTCGTTCGCAAGGAGAACTAGTGCGAGAGTTTCTGAAGAACAAGCTGGTAAAGGGAAGAACAAGAGAATGTCCGTGTTCGAGAGCATCGGACTAGGGTTGGCTTTTCGAAATGCTGCTTCCACTTGCAACTTTCTATCTAATCCAGGAATCTTCCTCAAATCTGTTGCTTCAAACCGTGAATTTCAGCAAATTTCACTTCGTTCTCGTGCTATGCTTTCTGAAAATGGCCATGAATCTATGTTCGATGCCAAGAGTGCTTCTACACCGACTGCAACCGACGCCCAGGGCTCTGGAACCACTGCTAGAAGTCGTCGATTGCTTAAGCTTCGTGAAGAGAAGCGAAAACGGGAGCATGATCGTCTCCACAATTATCCTGCCTGGGCGAAAGTGTTAGAAGATGCCTGCAAAAACGATGCGGAATTACGCGCTGTTCTTGGCGATAGCATTGGCAATCCAGAGGAAATGAGGAAAAAGGTTGAAGAGAGAGTTCGGAGGAAGGGTAGAGATTTCACAAAGTCTAAAACGGGTTCCATCCTTGCCTTCAAAGTCAGCTTTAGAGACTTCAATCCTCTCGATTCCTACATATGGTTTGAGTTGATTGGATCACCATCTGATCGAGATGTTGATCTTATTGGCAGTGTTATCCAGTCATGGTACGTCATGGGTCGATTGGGGGCCTTCAACTCTTCAAATTTACAGGTGGCGAATTCATCGATGGAGTACAATCCTGTGTATGACGCAGAAAAAGGGTTTAAAGTGATGCAGTCATCATTTCATGATATCAGTGATGTTGAGTTTCAGGACAACTGGGGCCGAGTTTGGGTCGACCTCGGTACGTCTGATTATTTGGCCATTGATGTACTTTTGAACTGTTTGACTGTTCTGAGCTCAGAATATTTAGGCATCCAACAAGTCGTTTTCGGGGGACGTCGAATGGGCGATTGGGAAGAAGGAATGACAAGCCCCGAATTCGGGTACAAGTTTTTCAAAGTCTAACTTCTTTTCAATCAACATTTTCAAGCTACGTGTATATAATGCTCTAAATGGTAACTAACAATTTATGTCCTTAGCAGCTCTAAATTTCCAGGAATTAGTCCCTATTTTTCTAAGTTCCAATCCCAATAAGGAAAATGAATAATTTATAACAAAGTTTTAGTGTTATTGATTCTTAG

Coding sequence (CDS)

ATGGATAATAACCGTAATTTCCAAATTTGTTTGCTAACGAGGGATTCATCGTCGTTCGCAAGGAGAACTAGTGCGAGAGTTTCTGAAGAACAAGCTGGTAAAGGGAAGAACAAGAGAATGTCCGTGTTCGAGAGCATCGGACTAGGGTTGGCTTTTCGAAATGCTGCTTCCACTTGCAACTTTCTATCTAATCCAGGAATCTTCCTCAAATCTGTTGCTTCAAACCGTGAATTTCAGCAAATTTCACTTCGTTCTCGTGCTATGCTTTCTGAAAATGGCCATGAATCTATGTTCGATGCCAAGAGTGCTTCTACACCGACTGCAACCGACGCCCAGGGCTCTGGAACCACTGCTAGAAGTCGTCGATTGCTTAAGCTTCGTGAAGAGAAGCGAAAACGGGAGCATGATCGTCTCCACAATTATCCTGCCTGGGCGAAAGTGTTAGAAGATGCCTGCAAAAACGATGCGGAATTACGCGCTGTTCTTGGCGATAGCATTGGCAATCCAGAGGAAATGAGGAAAAAGGTTGAAGAGAGAGTTCGGAGGAAGGGTAGAGATTTCACAAAGTCTAAAACGGGTTCCATCCTTGCCTTCAAAGTCAGCTTTAGAGACTTCAATCCTCTCGATTCCTACATATGGTTTGAGTTGATTGGATCACCATCTGATCGAGATGTTGATCTTATTGGCAGTGTTATCCAGTCATGGTACGTCATGGGTCGATTGGGGGCCTTCAACTCTTCAAATTTACAGGTGGCGAATTCATCGATGGAGTACAATCCTGTGTATGACGCAGAAAAAGGGTTTAAAGTGATGCAGTCATCATTTCATGATATCAGTGATGTTGAGTTTCAGGACAACTGGGGCCGAGTTTGGGTCGACCTCGGTACGTCTGATTATTTGGCCATTGATGTACTTTTGAACTGTTTGACTGTTCTGAGCTCAGAATATTTAGGCATCCAACAAGTCGTTTTCGGGGGACGTCGAATGGGCGATTGGGAAGAAGGAATGACAAGCCCCGAATTCGGGTACAAGTTTTTCAAAGTCTAA
Homology
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BLAST of CmoCh18G008450 vs. TrEMBL
Match: V4UC78_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015943mg PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.5e-121
Identity = 211/238 (88.66%), Postives = 230/238 (96.64%), Query Frame = 1 

Query: 111 AQGSGTTARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAELRAVLGDSIGNPE 170
           A+GSGT+AR RRLLK+REEKR+REHDRLHNYP+WAKVLEDACK+D ELRAVLGDSIGNPE
Sbjct: 85  AKGSGTSARGRRLLKVREEKRRREHDRLHNYPSWAKVLEDACKDDEELRAVLGDSIGNPE 144

Query: 171 EMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDFNPLDSYIWFELIGSPSDRDVDLIGS 230
            MRK+VEERVR+KGR+F KSKTGS+LAFKVSFRDFNPLDSYIWFEL GSPSDRDVDLIGS
Sbjct: 145 LMRKRVEERVRKKGRNFNKSKTGSVLAFKVSFRDFNPLDSYIWFELYGSPSDRDVDLIGS 204

Query: 231 VIQSWYVMGRLGAFNSSNLQVANSSMEYNPVYDAEKGFKVMQSSFHDISDVEFQDNWGRV 290
           VIQSWYVMGRLGAFNSSNLQ+ANSS+EY+P+YDAEKGF VM SSFHDISDVEFQDNWGRV
Sbjct: 205 VIQSWYVMGRLGAFNSSNLQLANSSIEYDPLYDAEKGFSVMPSSFHDISDVEFQDNWGRV 264

Query: 291 WVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTSPEFGYKFFKV 349
           WVDLGTSD+ A+DVLLNCLTVLSSEYLGIQQ+VFGGRRMGDWEEGMTSPEFGYK+FK+
Sbjct: 265 WVDLGTSDFFAVDVLLNCLTVLSSEYLGIQQIVFGGRRMGDWEEGMTSPEFGYKYFKI 322

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BLAST of CmoCh18G008450 vs. TrEMBL
Match: A0A068V8Y6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00018256001 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.5e-121
Identity = 207/238 (86.97%), Postives = 232/238 (97.48%), Query Frame = 1 

Query: 111 AQGSGTTARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAELRAVLGDSIGNPE 170
           ++GSGTTAR RRL+K+REEKRKRE+DRLHNYPAWAKVLEDACKNDAELRAVLGD+IGNPE
Sbjct: 23  SKGSGTTARGRRLIKVREEKRKREYDRLHNYPAWAKVLEDACKNDAELRAVLGDTIGNPE 82

Query: 171 EMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDFNPLDSYIWFELIGSPSDRDVDLIGS 230
            MRK+VEERVRRKGRDF KSKTGS+LAFKVSFRDFNPLDSYIWFEL GSPSDRDVDL+GS
Sbjct: 83  LMRKRVEERVRRKGRDFQKSKTGSVLAFKVSFRDFNPLDSYIWFELYGSPSDRDVDLLGS 142

Query: 231 VIQSWYVMGRLGAFNSSNLQVANSSMEYNPVYDAEKGFKVMQSSFHDISDVEFQDNWGRV 290
           VIQSWY+MGR+GAFNSSNLQ+ANSSMEY+P+YDA+KGFKVM SSFHDISDVEFQDNWGR+
Sbjct: 143 VIQSWYIMGRIGAFNSSNLQLANSSMEYDPLYDADKGFKVMPSSFHDISDVEFQDNWGRI 202

Query: 291 WVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTSPEFGYKFFKV 349
           WVDLGTSD+ +ID+LLNCLTVLSSEY+GIQQV+FGGR++GDWEEGMTSPE+GYKFFK+
Sbjct: 203 WVDLGTSDFFSIDILLNCLTVLSSEYVGIQQVIFGGRKIGDWEEGMTSPEYGYKFFKI 260

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BLAST of CmoCh18G008450 vs. TrEMBL
Match: F6HVX8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0071g01140 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.5e-121
Identity = 215/253 (84.98%), Postives = 234/253 (92.49%), Query Frame = 1 

Query: 96  SMFDAKSASTPTATDAQGSGTTARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKND 155
           S+ D   A  P     +GSGTTAR RRLLKLREEKRKRE+DRLHNYPAWAKV+EDACK+D
Sbjct: 48  SLSDENEAGVPKG---KGSGTTARGRRLLKLREEKRKREYDRLHNYPAWAKVMEDACKDD 107

Query: 156 AELRAVLGDSIGNPEEMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDFNPLDSYIWFE 215
           +ELRAVLGDSIGNPE MRK+VEERVR+KGRDF KSKTGS+LA+KVSFRDFNP+DSYIWFE
Sbjct: 108 SELRAVLGDSIGNPELMRKRVEERVRKKGRDFRKSKTGSVLAYKVSFRDFNPVDSYIWFE 167

Query: 216 LIGSPSDRDVDLIGSVIQSWYVMGRLGAFNSSNLQVANSSMEYNPVYDAEKGFKVMQSSF 275
           L GSPSDRDVDLIGSVIQSWYVMGRLGAFNSSNLQ+ANSSMEYNP+YDA+KGFK+M SSF
Sbjct: 168 LYGSPSDRDVDLIGSVIQSWYVMGRLGAFNSSNLQLANSSMEYNPLYDADKGFKLMPSSF 227

Query: 276 HDISDVEFQDNWGRVWVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEG 335
           HDI DVEFQDNWGRVWVDLGTSD+ AIDVLLNCLTVLSSEYLGIQQVVFGGR MGDWEEG
Sbjct: 228 HDIGDVEFQDNWGRVWVDLGTSDFFAIDVLLNCLTVLSSEYLGIQQVVFGGRNMGDWEEG 287

Query: 336 MTSPEFGYKFFKV 349
           MTSPE+GYK+FK+
Sbjct: 288 MTSPEYGYKYFKI 297

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BLAST of CmoCh18G008450 vs. TrEMBL
Match: W9SFB2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011024 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 1.7e-120
Identity = 210/238 (88.24%), Postives = 228/238 (95.80%), Query Frame = 1 

Query: 111 AQGSGTTARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAELRAVLGDSIGNPE 170
           A+GSGTTAR RRLLKLREEKRKRE+DRLHNYP WAKVLEDACK+D ELRAVLGDSIGNPE
Sbjct: 65  AKGSGTTARGRRLLKLREEKRKREYDRLHNYPTWAKVLEDACKDDDELRAVLGDSIGNPE 124

Query: 171 EMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDFNPLDSYIWFELIGSPSDRDVDLIGS 230
            MRKKVEERVR+KGRDF KSKTGS+L+FKVSFRDFNP+DSYIWFEL GSPSDRDVDLIGS
Sbjct: 125 LMRKKVEERVRKKGRDFRKSKTGSVLSFKVSFRDFNPVDSYIWFELYGSPSDRDVDLIGS 184

Query: 231 VIQSWYVMGRLGAFNSSNLQVANSSMEYNPVYDAEKGFKVMQSSFHDISDVEFQDNWGRV 290
           VIQSWYVMGRLG+FNS+NLQ+ANSSM+Y+P+YDAEKGFKVM SSFHDI DVEFQDNWGRV
Sbjct: 185 VIQSWYVMGRLGSFNSTNLQLANSSMDYDPLYDAEKGFKVMPSSFHDIGDVEFQDNWGRV 244

Query: 291 WVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTSPEFGYKFFKV 349
           WVDLGTSDY AIDVLLNCLTVLSSEYLGIQQ+VFGGR MGDWEEGMT+PE+GYK+FK+
Sbjct: 245 WVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQIVFGGRGMGDWEEGMTNPEYGYKYFKI 302

[Close]
BLAST of CmoCh18G008450 vs. TrEMBL
Match: A0A0B2SCW4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_021604 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 3.8e-120
Identity = 211/283 (74.56%), Postives = 247/283 (87.28%), Query Frame = 1 

Query: 66  GIFLKSVASNREFQQISLRSRAMLSENGHESMFDAKSASTPTATDAQGSGTTARSRRLLK 125
           G +  S  + R F+ + +   A+  +N H     + +         +GSGTTAR RRLL+
Sbjct: 22  GYWFPSSTTKRSFRPVLVSVSAISDDNSHSYTSSSSNGRKLEEEGIKGSGTTARDRRLLR 81

Query: 126 LREEKRKREHDRLHNYPAWAKVLEDACKNDAELRAVLGDSIGNPEEMRKKVEERVRRKGR 185
           +R+EKR+RE+DRL+NYPAWAKVLE+ACK+DAELRAVLGDSIGNPE MRK+VE+RVR+KGR
Sbjct: 82  IRQEKRQREYDRLNNYPAWAKVLENACKDDAELRAVLGDSIGNPELMRKRVEDRVRKKGR 141

Query: 186 DFTKSKTGSILAFKVSFRDFNPLDSYIWFELIGSPSDRDVDLIGSVIQSWYVMGRLGAFN 245
           DF KSKTGS+LAFKV+FRDFNPLDSYIWFEL GSPSDRDV+LIG+VIQSWYVMGRLGAFN
Sbjct: 142 DFQKSKTGSVLAFKVTFRDFNPLDSYIWFELFGSPSDRDVNLIGNVIQSWYVMGRLGAFN 201

Query: 246 SSNLQVANSSMEYNPVYDAEKGFKVMQSSFHDISDVEFQDNWGRVWVDLGTSDYLAIDVL 305
           SSNLQ+ANSS+EY+P+YDA+KGFKVM SSFHDISD+EFQ+NWGRVWVDLGTSDY AIDVL
Sbjct: 202 SSNLQLANSSVEYDPLYDADKGFKVMPSSFHDISDIEFQENWGRVWVDLGTSDYFAIDVL 261

Query: 306 LNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTSPEFGYKFFKV 349
           LNCLTVLSSEYLGIQQ+VFGGRRMGDWEEGMTSPE+GYK+FK+
Sbjct: 262 LNCLTVLSSEYLGIQQIVFGGRRMGDWEEGMTSPEYGYKYFKI 304

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BLAST of CmoCh18G008450 vs. TAIR10
Match: AT5G08400.1 (AT5G08400.1 Protein of unknown function (DUF3531))

HSP 1 Score: 404.8 bits (1039), Expect = 5.3e-113
Identity = 196/270 (72.59%), Postives = 226/270 (83.70%), Query Frame = 1 

Query: 112 QGSGTTARSRRLLKLREEKRKREHDRLHNYPAW--------------------------- 171
           +GSGTTAR RRLLK+REEKRKR++DRLH+YP+W                           
Sbjct: 64  KGSGTTARGRRLLKVREEKRKRDYDRLHDYPSWAKYLFLSFSFALQVFVFLPKSRESVNL 123

Query: 172 ------AKVLEDACKNDAELRAVLGDSIGNPEEMRKKVEERVRRKGRDFTKSKTGSILAF 231
                  +VLE ACK+D ELRAVLGDSIGNPE MRKKVEERVR+KG+DF K KTGS+L+F
Sbjct: 124 FLVNDKCRVLESACKDDEELRAVLGDSIGNPELMRKKVEERVRKKGKDFQKQKTGSVLSF 183

Query: 232 KVSFRDFNPLDSYIWFELIGSPSDRDVDLIGSVIQSWYVMGRLGAFNSSNLQVANSSMEY 291
           KV+FRDFNP+DS+IWFEL G+PSDRDVDLIGSVIQ+WYVMGRLGAFN+SNLQ+AN+S+EY
Sbjct: 184 KVNFRDFNPVDSFIWFELYGTPSDRDVDLIGSVIQAWYVMGRLGAFNTSNLQLANTSLEY 243

Query: 292 NPVYDAEKGFKVMQSSFHDISDVEFQDNWGRVWVDLGTSDYLAIDVLLNCLTVLSSEYLG 349
           +P+YDAEKGFKVM SSFHDISDVEFQDNWGRVWVDLGTSD  A+DVLLNCLTV+SSEYLG
Sbjct: 244 DPLYDAEKGFKVMPSSFHDISDVEFQDNWGRVWVDLGTSDIFALDVLLNCLTVMSSEYLG 303

[Close]
BLAST of CmoCh18G008450 vs. TAIR10
Match: AT4G29400.1 (AT4G29400.1 Protein of unknown function (DUF3531))

HSP 1 Score: 191.0 bits (484), Expect = 1.2e-48
Identity = 85/194 (43.81%), Postives = 132/194 (68.04%), Query Frame = 1 

Query: 155 DAELRAVLGDSIGNPEEMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDFNPLDSYIWF 214
           D E   +LGD + NP++ +KK+EER+R+K      +KTGS  +  V+F  F   +SY+W 
Sbjct: 109 DPEFADILGDCLDNPDKAQKKMEERLRKKRNKILHTKTGSATSMPVTFNKFEYSNSYMWL 168

Query: 215 ELIGSPSDRDVDLIGSVIQSWYVMGRLGAFNSSNLQVANSSMEYNPVYDAEKGFKVMQSS 274
           E   +P D+D+ LI   I+SW+++GRLG +NS N+Q++ + ++  P YDA  G  V  ++
Sbjct: 169 EFYNTPLDKDIALISDTIRSWHILGRLGGYNSMNMQLSQAPLDKRPNYDAILGANVEPTT 228

Query: 275 FHDISDVEFQDNWGRVWVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEE 334
           F++I D+E QDN  R+W+D+GTS+ L +DVL+N LT +SS+Y+GI++VVFGG     W+E
Sbjct: 229 FYNIGDLEVQDNVARIWLDIGTSEPLILDVLINALTQISSDYVGIKKVVFGGSEFESWKE 288

Query: 335 GMTSPEFGYKFFKV 349
            MTS E G++  K+
Sbjct: 289 NMTSEESGFRVHKI 302

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BLAST of CmoCh18G008450 vs. NCBI nr
Match: gi|449458716|ref|XP_004147093.1| (PREDICTED: uncharacterized protein LOC101211689 [Cucumis sativus])

HSP 1 Score: 538.9 bits (1387), Expect = 6.6e-150
Identity = 273/310 (88.06%), Postives = 286/310 (92.26%), Query Frame = 1 

Query: 40  MSVFESIGLGLAFRNAASTCNFLSNPGIFLKSVASNREFQQISLRSRAMLSENGHESMFD 99
           MSVF  IGLGLAF N  STC F SN   F +S+ S  EF+ ISLRSRA+LSENG +S FD
Sbjct: 1   MSVFNGIGLGLAFTNPNSTCIFHSNTRFFPQSLTSIPEFRPISLRSRALLSENGDDSKFD 60

Query: 100 AKSASTPTATDAQ-GSGTTARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAEL 159
           A S STPTATDA+  SGT+ARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAEL
Sbjct: 61  AVSTSTPTATDAKKSSGTSARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAEL 120

Query: 160 RAVLGDSIGNPEEMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDFNPLDSYIWFELIG 219
           RAVLGDSIGNPEEMRKKVEERVRRKGRDF KSKTGSILAFKVSFRDFNPLDSYIWFELIG
Sbjct: 121 RAVLGDSIGNPEEMRKKVEERVRRKGRDFQKSKTGSILAFKVSFRDFNPLDSYIWFELIG 180

Query: 220 SPSDRDVDLIGSVIQSWYVMGRLGAFNSSNLQVANSSMEYNPVYDAEKGFKVMQSSFHDI 279
           SP+DRDVDLIGSVIQSWYVMGRLGAFNSSNLQ+ANSSMEYNPVYDA+KGFKVMQSSFHDI
Sbjct: 181 SPTDRDVDLIGSVIQSWYVMGRLGAFNSSNLQLANSSMEYNPVYDADKGFKVMQSSFHDI 240

Query: 280 SDVEFQDNWGRVWVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTS 339
           SDVEFQDNWGRVWVDLGTSDY AIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTS
Sbjct: 241 SDVEFQDNWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTS 300

Query: 340 PEFGYKFFKV 349
           P++GYK FK+
Sbjct: 301 PDYGYKSFKI 310

[Close]
BLAST of CmoCh18G008450 vs. NCBI nr
Match: gi|659090247|ref|XP_008445913.1| (PREDICTED: uncharacterized protein LOC103488796 [Cucumis melo])

HSP 1 Score: 537.3 bits (1383), Expect = 1.9e-149
Identity = 270/310 (87.10%), Postives = 284/310 (91.61%), Query Frame = 1 

Query: 40  MSVFESIGLGLAFRNAASTCNFLSNPGIFLKSVASNREFQQISLRSRAMLSENGHESMFD 99
           MSV   +GLGLAF N  STCNF SN   F +S+AS  EF  ISLRSRA+LSENG +S FD
Sbjct: 1   MSVLHGVGLGLAFTNPNSTCNFHSNTRFFPQSLASVPEFHPISLRSRALLSENGDDSKFD 60

Query: 100 AKSASTPTATDAQ-GSGTTARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAEL 159
           A S STPT TD +  SGT+ARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAEL
Sbjct: 61  AMSTSTPTTTDPKKSSGTSARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAEL 120

Query: 160 RAVLGDSIGNPEEMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDFNPLDSYIWFELIG 219
           RAVLGDSIGNPEEMRKKVE+RVRRKGRDF KSKTGSILAFKVSFRDFNPLDSYIWFELIG
Sbjct: 121 RAVLGDSIGNPEEMRKKVEDRVRRKGRDFQKSKTGSILAFKVSFRDFNPLDSYIWFELIG 180

Query: 220 SPSDRDVDLIGSVIQSWYVMGRLGAFNSSNLQVANSSMEYNPVYDAEKGFKVMQSSFHDI 279
           SP+DRDVDLIGS+IQSWYVMGRLGAFNSSNLQ+ANSSMEYNPVYDA+KGFKVMQSSFHDI
Sbjct: 181 SPTDRDVDLIGSIIQSWYVMGRLGAFNSSNLQLANSSMEYNPVYDADKGFKVMQSSFHDI 240

Query: 280 SDVEFQDNWGRVWVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTS 339
           SDVEFQDNWGRVWVDLGTSDY AIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTS
Sbjct: 241 SDVEFQDNWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTS 300

Query: 340 PEFGYKFFKV 349
           PE+GYK FK+
Sbjct: 301 PEYGYKSFKI 310

[Close]
BLAST of CmoCh18G008450 vs. NCBI nr
Match: gi|297742705|emb|CBI35339.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 444.1 bits (1141), Expect = 2.2e-121
Identity = 215/253 (84.98%), Postives = 234/253 (92.49%), Query Frame = 1 

Query: 96  SMFDAKSASTPTATDAQGSGTTARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKND 155
           S+ D   A  P     +GSGTTAR RRLLKLREEKRKRE+DRLHNYPAWAKV+EDACK+D
Sbjct: 79  SLSDENEAGVPKG---KGSGTTARGRRLLKLREEKRKREYDRLHNYPAWAKVMEDACKDD 138

Query: 156 AELRAVLGDSIGNPEEMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDFNPLDSYIWFE 215
           +ELRAVLGDSIGNPE MRK+VEERVR+KGRDF KSKTGS+LA+KVSFRDFNP+DSYIWFE
Sbjct: 139 SELRAVLGDSIGNPELMRKRVEERVRKKGRDFRKSKTGSVLAYKVSFRDFNPVDSYIWFE 198

Query: 216 LIGSPSDRDVDLIGSVIQSWYVMGRLGAFNSSNLQVANSSMEYNPVYDAEKGFKVMQSSF 275
           L GSPSDRDVDLIGSVIQSWYVMGRLGAFNSSNLQ+ANSSMEYNP+YDA+KGFK+M SSF
Sbjct: 199 LYGSPSDRDVDLIGSVIQSWYVMGRLGAFNSSNLQLANSSMEYNPLYDADKGFKLMPSSF 258

Query: 276 HDISDVEFQDNWGRVWVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEG 335
           HDI DVEFQDNWGRVWVDLGTSD+ AIDVLLNCLTVLSSEYLGIQQVVFGGR MGDWEEG
Sbjct: 259 HDIGDVEFQDNWGRVWVDLGTSDFFAIDVLLNCLTVLSSEYLGIQQVVFGGRNMGDWEEG 318

Query: 336 MTSPEFGYKFFKV 349
           MTSPE+GYK+FK+
Sbjct: 319 MTSPEYGYKYFKI 328

[Close]
BLAST of CmoCh18G008450 vs. NCBI nr
Match: gi|567912383|ref|XP_006448505.1| (hypothetical protein CICLE_v10015943mg [Citrus clementina])

HSP 1 Score: 444.1 bits (1141), Expect = 2.2e-121
Identity = 211/238 (88.66%), Postives = 230/238 (96.64%), Query Frame = 1 

Query: 111 AQGSGTTARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAELRAVLGDSIGNPE 170
           A+GSGT+AR RRLLK+REEKR+REHDRLHNYP+WAKVLEDACK+D ELRAVLGDSIGNPE
Sbjct: 85  AKGSGTSARGRRLLKVREEKRRREHDRLHNYPSWAKVLEDACKDDEELRAVLGDSIGNPE 144

Query: 171 EMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDFNPLDSYIWFELIGSPSDRDVDLIGS 230
            MRK+VEERVR+KGR+F KSKTGS+LAFKVSFRDFNPLDSYIWFEL GSPSDRDVDLIGS
Sbjct: 145 LMRKRVEERVRKKGRNFNKSKTGSVLAFKVSFRDFNPLDSYIWFELYGSPSDRDVDLIGS 204

Query: 231 VIQSWYVMGRLGAFNSSNLQVANSSMEYNPVYDAEKGFKVMQSSFHDISDVEFQDNWGRV 290
           VIQSWYVMGRLGAFNSSNLQ+ANSS+EY+P+YDAEKGF VM SSFHDISDVEFQDNWGRV
Sbjct: 205 VIQSWYVMGRLGAFNSSNLQLANSSIEYDPLYDAEKGFSVMPSSFHDISDVEFQDNWGRV 264

Query: 291 WVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTSPEFGYKFFKV 349
           WVDLGTSD+ A+DVLLNCLTVLSSEYLGIQQ+VFGGRRMGDWEEGMTSPEFGYK+FK+
Sbjct: 265 WVDLGTSDFFAVDVLLNCLTVLSSEYLGIQQIVFGGRRMGDWEEGMTSPEFGYKYFKI 322

[Close]
BLAST of CmoCh18G008450 vs. NCBI nr
Match: gi|720060625|ref|XP_010274923.1| (PREDICTED: uncharacterized protein LOC104610134 [Nelumbo nucifera])

HSP 1 Score: 444.1 bits (1141), Expect = 2.2e-121
Identity = 215/263 (81.75%), Postives = 241/263 (91.63%), Query Frame = 1 

Query: 86  RAMLSENGHESMFDAKSASTPTATDAQGSGTTARSRRLLKLREEKRKREHDRLHNYPAWA 145
           RA  S+N  +++ +  + +      A+GSGTTARSRRLLK++EEKRKRE+DRLHNYP+WA
Sbjct: 68  RAAASDNSGDTINNKDTMA------AKGSGTTARSRRLLKVKEEKRKREYDRLHNYPSWA 127

Query: 146 KVLEDACKNDAELRAVLGDSIGNPEEMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDF 205
           K+LEDAC+ND+ELRAVLGDSIGNPE+MRKKVEERVR+KGRDF KSKTGS+LAFKVSFRDF
Sbjct: 128 KILEDACRNDSELRAVLGDSIGNPEQMRKKVEERVRKKGRDFRKSKTGSVLAFKVSFRDF 187

Query: 206 NPLDSYIWFELIGSPSDRDVDLIGSVIQSWYVMGRLGAFNSSNLQVANSSMEYNPVYDAE 265
           NPLDSYIWFEL GSPSDRDVDLIGSVIQSWYVMGRLGAFNSSNLQ+ANSS EYNP+YDA+
Sbjct: 188 NPLDSYIWFELYGSPSDRDVDLIGSVIQSWYVMGRLGAFNSSNLQLANSSFEYNPLYDAD 247

Query: 266 KGFKVMQSSFHDISDVEFQDNWGRVWVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVVFG 325
           KGFKVM SSFHDISDVEFQDNWGRVWVDLGT D+ A+DVLLNCLTVLSSEYLGIQQVVFG
Sbjct: 248 KGFKVMPSSFHDISDVEFQDNWGRVWVDLGTCDFFAVDVLLNCLTVLSSEYLGIQQVVFG 307

Query: 326 GRRMGDWEEGMTSPEFGYKFFKV 349
           G RMGDWEEGMT+PE+GYK FK+
Sbjct: 308 GHRMGDWEEGMTNPEYGYKHFKI 324

The following BLAST results are available for this feature:
BLAST of CmoCh18G008450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh18G008450 vs. TrEMBL
Match NameE-valueIdentityDescription
V4UC78_9ROSI1.5e-12188.66Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015943mg PE=4 SV=1[more]
A0A068V8Y6_COFCA1.5e-12186.97Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00018256001 PE=4 SV=1[more]
F6HVX8_VITVI1.5e-12184.98Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0071g01140 PE=4 SV=... [more]
W9SFB2_9ROSA1.7e-12088.24Uncharacterized protein OS=Morus notabilis GN=L484_011024 PE=4 SV=1[more]
A0A0B2SCW4_GLYSO3.8e-12074.56Uncharacterized protein OS=Glycine soja GN=glysoja_021604 PE=4 SV=1[more]
BLAST of CmoCh18G008450 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G08400.15.3e-11372.59 Protein of unknown function (DUF3531)[more]
AT4G29400.11.2e-4843.81 Protein of unknown function (DUF3531)[more]
BLAST of CmoCh18G008450 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449458716|ref|XP_004147093.1|6.6e-15088.06PREDICTED: uncharacterized protein LOC101211689 [Cucumis sativus][more]
gi|659090247|ref|XP_008445913.1|1.9e-14987.10PREDICTED: uncharacterized protein LOC103488796 [Cucumis melo][more]
gi|297742705|emb|CBI35339.3|2.2e-12184.98unnamed protein product [Vitis vinifera][more]
gi|567912383|ref|XP_006448505.1|2.2e-12188.66hypothetical protein CICLE_v10015943mg [Citrus clementina][more]
gi|720060625|ref|XP_010274923.1|2.2e-12181.75PREDICTED: uncharacterized protein LOC104610134 [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021920DUF3531
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010207 photosystem II assembly
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh18G008450.1CmoCh18G008450.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021920Protein of unknown function DUF3531PFAMPF12049DUF3531coord: 199..337
score: 2.4
NoneNo IPR availablePANTHERPTHR33102FAMILY NOT NAMEDcoord: 68..348
score: 4.7E
NoneNo IPR availablePANTHERPTHR33102:SF13DVL17coord: 68..348
score: 4.7E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh18G008450CmaCh18G008410Cucurbita maxima (Rimu)cmacmoB406
CmoCh18G008450CmaCh04G012760Cucurbita maxima (Rimu)cmacmoB713
CmoCh18G008450Cla022886Watermelon (97103) v1cmowmB394
CmoCh18G008450Csa5G580640Cucumber (Chinese Long) v2cmocuB408
CmoCh18G008450MELO3C011773Melon (DHL92) v3.5.1cmomeB346
CmoCh18G008450ClCG11G012820Watermelon (Charleston Gray)cmowcgB337
CmoCh18G008450CSPI05G20460Wild cucumber (PI 183967)cmocpiB413
CmoCh18G008450Lsi04G007650Bottle gourd (USVL1VR-Ls)cmolsiB366
CmoCh18G008450Lsi04G000030Bottle gourd (USVL1VR-Ls)cmolsiB364
CmoCh18G008450Cp4.1LG01g10080Cucurbita pepo (Zucchini)cmocpeB399
CmoCh18G008450Cp4.1LG09g04590Cucurbita pepo (Zucchini)cmocpeB376
CmoCh18G008450MELO3C011773.2Melon (DHL92) v3.6.1cmomedB397
CmoCh18G008450CsaV3_5G029220Cucumber (Chinese Long) v3cmocucB0489
CmoCh18G008450Cla97C11G218700Watermelon (97103) v2cmowmbB392
CmoCh18G008450Bhi07G000941Wax gourdcmowgoB0541
CmoCh18G008450CsGy5G019980Cucumber (Gy14) v2cgybcmoB605
CmoCh18G008450Carg02040Silver-seed gourdcarcmoB1134
CmoCh18G008450Carg14425Silver-seed gourdcarcmoB0984
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh18G008450Cucurbita pepo (Zucchini)cmocpeB392
CmoCh18G008450Bottle gourd (USVL1VR-Ls)cmolsiB369
CmoCh18G008450Silver-seed gourdcarcmoB1135
CmoCh18G008450Wax gourdcmowgoB0536
CmoCh18G008450Cucurbita moschata (Rifu)cmocmoB336
CmoCh18G008450Cucurbita maxima (Rimu)cmacmoB706