CmaCh18G008410 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh18G008410
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionOxidoreductase/ transition metal ion binding protein
LocationCma_Chr18 : 7345115 .. 7349869 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAATGGATAATAACCGAAATTTCAAAATTTGTTTGCTAACGAGGGAATCATCGTCGTTCGTAAGGAGAACTAGTGCGAGAGTTTCTGAAGAACAAGCTGGTTAAGGGAAGAACAAGAGAATGTCCGTGTTCGAGGTCATCGGACTAGGGTTGGCTTTTCGAAATGCTACTTCCACTTGCAACTTTCTATCTAATCCAGGAATCTTCCTCAAATCTGTTACTCCAAACCGTGAATTTCAGCTAATTTCACTTCGTTCTCGTGCTATGCTTTCTGAAAACGGCCACGAATCTATGTTTGATGCCAAGAGTGCTTCTACACCGACTGCAACTGACGCCAAGGGCTCTGGAACCACTGCTAGAAGTCGTCGATTGCTTAAGCTTCGTGAAGAGAAGCGAAAACGGGAGCATGATCGTCTCCACAATTATCCTGCTTGGGCGAAGTCTCTCTCTCTCTTTTCTGTATGATTGTGTGTTAGCATTTTTTTCAAGTGTATTCGATTGATAATGAAATCGCCGGTAAAACGACAGAGTGTTAGAAGATGCCTGCAAAAACGATGCGGAATTACGCGCTGTTCTTGGCGATAGCATTGGCAATCCAGAGGAAATGAGGAAAAAGGTATATCGATTTGGCTGATATTCATCTTCTTCAAACATTTACTGCTAACAGCTTTTGATATTGTGTCAGTTTTTTTAATCTATTTTTCAGATTTCTTCACTTCACTTTGAGTGACAAGAAACCTTAACAAAATGCTTCAAACTTGTTTGCAGTATATTCGCGATATAGGATTTAACGTTTCCTTGATATATTCTTTATCCATCGGTATGATGTCTTAGAAGATAAGCTTGCGTCGAGTACGACTGTCATTATATCTTGTTGATATAGTTGAATATATTTTGTTGGTCCAACATTTTCTGAGTATTGGTGCGTACTGTCATGAACGGATGCAGATGATATTTCTGGATAATCAACAGGATTACTTTATTAGTCGCCGTTTCATAAGTTACTCATTTGACTTATATTCTAGTATTGGCTCTTTATATTATACTCTTCCAAGATCAACTTAATTATCACACAACATTTTGCTGGAGAAGTTTCTCATATGACTAATAATTCATATACAAAGGTGTTGTTCATCAACTTATTTCGCATCTATTGTCAGTCACGAGCAATTAGCTTCTTACTAGAGTATCAAAACCAATCTGAATCTCATGTATTATACACTTGCCCGTGCTGGCATTCACACAAGTGATAGAACTGAAGAACAGAATAAGCTTGTTTCTCTGAGGTATCAGGCAGTAGAGATAAAACTTCTAAATGTTTTTCATTCAATTCCTGTTAAACGAAGGCATTTTCTTATCTTTGTGCTTGATACATCTTCCAATGTGATTGTGGTAGGTTGAAGAGAGAGTTCGGAGGAAGGGTAGAGATTTCACAAAGTCTAAAACGGGTTCCATCCTTGCCTTCAAAGTCAGCTTTAGAGAGTAATTTTTTTTTTAAACGCCCCTTACTTGTTTATCATCCTTTTTGGTCCAAACTAGTATTAGCTCATTTCCAGCGCCAAAATCAAAGTCTAATTCTCCATAATACAGAAAAGATTTCACCACATTGCCAATTCCATTTTTTCTTGCATTGAACCGTTGCTCATCAAATCTGAATTTGTTCTTCTCAATTGCTCAGGTTTCGAATCTGTTTTGAAAAAAATGTTTAAAAACCTGAAAGGTAGTGTTAATTCAGCAAGTTCTCCTTTAAAGAAAGCTGTATCTTAGTTTTTAGTATGGCTTCCTTGCACGAAAGGATTTTGTTTAAACTTTGGGTTTTCCAAATGTGCAAGTCATGAATTTTTTTGATGTGTTGTTTTACTTTTTTTTTTCTTTTTGAACGTTAAGTTATGATTAGATATAGTTTACTGTTTTATGGGTACTGGCAGTGTCATGGTTCAAAGATGCTTTTCTTACCTTCTCAGCTGATATGAGGATGGGAATATGCATTCTCGTTATTTAGGTCGTATTTGATAACCATTTGATTTTTGGTTTTTGAAAATTATGCTTATTTTTTTTTATCATTTCTCTACCATGAATTTAATCTTTCTTAAGCAAACATTTGAATTGTTAGCCAAATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCACTTTTTAGTTGAAAATATATGTACTTATTATCAAAGCAAGGAAATCCATGGGTGGAAGTAGAACAGTTTTGTAGATGCATTCTAGTTGAGAAAGTGTTTTATCATTCTCCAACTGCGGATGTGTTTGAGACCTTCCATGCCTTTTTTTTAAGACTTTTTGTTGTGCCCCTCTCTCTATCGATCTCGCTGCTTCGCCTCTATCTCTAAAGGATGAGGGTGGCAGCCTTGATTGGGTGCCCCTCTAAGATCCCCGATTAACTGAGGCTCGGGGCGAGGGGGCTTTGCCTAAATTTCTTGAAGAGCACAAAGTCACTTCTTCATCTAGAAAGGAACACCAGAGAAGTAATTAAAAGAAACAAAAGTTACCAAATGAGACCTTATTTATCTTTTTCCCATGAGTGTAGTCAGCTATTATATAGATGGGAAGTTTGGTCATAATTGAAATGTTGGATCATGATAACTTTCTAAGTGACTATATAATCAGCTAAAATCTTATAAATTACGTTCTTTTTCTTGGTAAATTTGTAGTAGTCCAGTGCAGAACTGAACAATCCCAGGATACAGTGATATTGGACTTCTGCTATCTTTGAACATCCTCTGGCTGATTTTGTCCTCATTTCTTGAATAACTGATTTTTAAGTTTAACCATTGTTTTTCAAAACACTTAAACATTTATTTATACCTGTTCGTTGTGTCTTGTGAATCTTTTAGGCATCCTTAACCTGCTAATGAAGTGAAAATTATTCGTACTTTTGTTGATGTGGTGACAAATTGTTCATTTAATTTTTTCGGACGTTCGAACTTTACCATTTTTAGTAACTAACCATCCCTTTCCCTCTGTTTTTCTGCATAGCTTCAATCCTCTCGATTCCTACATATGGTTTGAGTTGATTGGATCACCATCTGATCGAGATGTTGATCTTATTGGCAGTGTAAGTTAATTCTTATTGCCATAGAATGGTTTTCTTTGTCAGAATTATTCTTTTCCTTGATCCTCATAAACATTGAAAATGACCATCTTCCACTTTCCCGCCACTCTCTGTGCTACCCTGAATGACTCTTAACCTTCCTTATATTTTGTATTACTTAAATTACAAGTTACCATGCAGGTTATCCAGTCATGGTACGTCATGGGTCGATTGGGGGCCTTCAACTCTTCAAATTTACAGGTTTCTTCATATATCCTTTAACCTAATTGATGTATTCTTCCTTCAACTCTTCAATCAACCCAACAGCCTAAAGGTAAATTTAATTATATCAACCTCCAATACCTCCTCTCACTTATGGGCTTGAATATTTTTAGAAGGTCCAACATGACCACTCTAATTGTTAAATCACTAATCAACCCAAAAACTTAAGCTGATGGGTTATGGTAAATTCCGACAACCCCAATGATTTGAAGCCAATTACATGTCCTTTTTCTTTACCTATTTCACAATTCAAAACTAATTCTCTTATTAAATTCATTACTTATATATTCGAATGAGGGAAGGCCTTATAACCAGTGTTTTCATTCTTTTCCACTTGACTTTTTGACGTGTGGGGATAACATTTACATTATGAATGTATCACACAACTACTTAATTGTTTTGTCAGCTTTATATGGTTGAAACTAGGTTCTCTAGATCTTTTCTCTAGAACTCTCTATTTATTTGTTTTGATAAACTAGGTTCTCTAGATCTTTTCTCAATTGTATATGAATTTGGTTATTTGGGAGCCAATTACTGATTCCTTTCCAAAGAAAGGGATAGCTCAACCAACCTGGTTAGGTGGTCTGTCTCTCACACCTCCTCCTAAGACTTAATGGGACCAAATCCAGGGCAGCTGAGTGAATTACTAAATATTTGGAATAAAAACTTCATTGAATCATTATTCGAACACATACCACGACATAATTTCAGGTTGCGAATTCATCGATGGAGTACAATCCTGTGTATGATGCAGAAAAAGGGTTTAAAGTGATGCAGTCATCATTTCATGATATCAGTGATGTTGAGTTTCAGGACAACTGGGGCCGAGTTTGGTAAGAGTTCTTGGAATTAACTGTATTTCCATTATTCAATCTCAATGTGGAAAATTCAAACAAGTTGTGCGATAATGTGTGGCAGGGTCGACCTCGGTACGTCTGATTATTTGGCCATTGATGTACTTTTGAACTGTTTGACTGTTCTGAGCTCAGAGTAAGTTTGTTTTCTGGACGAATACTTGTAAAGATTATAAAGGTTATAGGTATGCATCTAATTAAGGAACTTGTTGACTTTCTCACTTTGAGCTACAGATATTTAGGCATCCAACAAGTCATTTTCGGGGGACGTCGAATGGGCGATTGGGAAGAAGGAATGACAAGCCCCGAGTTCGGGTACAAATTTTTCAAAGTCTAACTTCTTTTCAATCTACCTTTTCTTTTCAAAGGAACACGGCGGGTATATAATGCCCTAAATGGTAACTCTATCAATTTCTGTCCTTAGCGCCTCTAAATTTTCAGGAATTAGTCACTTCAACGGTCTTCGATGGTTTTACAGGTATCCAAAATACAAACAAGATAGATTTTTGTTGTCCCTATTTTTCAAAGTTCCGATCCCAA

mRNA sequence

GAATGGATAATAACCGAAATTTCAAAATTTGTTTGCTAACGAGGGAATCATCGTCGTTCGTAAGGAGAACTAGTGCGAGAGTTTCTGAAGAACAAGCTGGTTAAGGGAAGAACAAGAGAATGTCCGTGTTCGAGGTCATCGGACTAGGGTTGGCTTTTCGAAATGCTACTTCCACTTGCAACTTTCTATCTAATCCAGGAATCTTCCTCAAATCTGTTACTCCAAACCGTGAATTTCAGCTAATTTCACTTCGTTCTCGTGCTATGCTTTCTGAAAACGGCCACGAATCTATGTTTGATGCCAAGAGTGCTTCTACACCGACTGCAACTGACGCCAAGGGCTCTGGAACCACTGCTAGAAGTCGTCGATTGCTTAAGCTTCGTGAAGAGAAGCGAAAACGGGAGCATGATCGTCTCCACAATTATCCTGCTTGGGCGAAAGTGTTAGAAGATGCCTGCAAAAACGATGCGGAATTACGCGCTGTTCTTGGCGATAGCATTGGCAATCCAGAGGAAATGAGGAAAAAGGTTGAAGAGAGAGTTCGGAGGAAGGGTAGAGATTTCACAAAGTCTAAAACGGGTTCCATCCTTGCCTTCAAAGTCAGCTTTAGAGACTTCAATCCTCTCGATTCCTACATATGGTTTGAGTTGATTGGATCACCATCTGATCGAGATGTTGATCTTATTGGCAGTGTTGCGAATTCATCGATGGAGTACAATCCTGTGTATGATGCAGAAAAAGGGTTTAAAGTGATGCAGTCATCATTTCATGATATCAGTGATGTTGAGTTTCAGGACAACTGGGGCCGAGTTTGGGTCGACCTCGGTACGTCTGATTATTTGGCCATTGATGTACTTTTGAACTGTTTGACTGTTCTGAGCTCAGAATATTTAGGCATCCAACAAGTCATTTTCGGGGGACGTCGAATGGGCGATTGGGAAGAAGGAATGACAAGCCCCGAGTTCGGGTACAAATTTTTCAAAGTCTAACTTCTTTTCAATCTACCTTTTCTTTTCAAAGGAACACGGCGGGTATATAATGCCCTAAATGGTAACTCTATCAATTTCTGTCCTTAGCGCCTCTAAATTTTCAGGAATTAGTCACTTCAACGGTCTTCGATGGTTTTACAGGTATCCAAAATACAAACAAGATAGATTTTTGTTGTCCCTATTTTTCAAAGTTCCGATCCCAA

Coding sequence (CDS)

ATGTCCGTGTTCGAGGTCATCGGACTAGGGTTGGCTTTTCGAAATGCTACTTCCACTTGCAACTTTCTATCTAATCCAGGAATCTTCCTCAAATCTGTTACTCCAAACCGTGAATTTCAGCTAATTTCACTTCGTTCTCGTGCTATGCTTTCTGAAAACGGCCACGAATCTATGTTTGATGCCAAGAGTGCTTCTACACCGACTGCAACTGACGCCAAGGGCTCTGGAACCACTGCTAGAAGTCGTCGATTGCTTAAGCTTCGTGAAGAGAAGCGAAAACGGGAGCATGATCGTCTCCACAATTATCCTGCTTGGGCGAAAGTGTTAGAAGATGCCTGCAAAAACGATGCGGAATTACGCGCTGTTCTTGGCGATAGCATTGGCAATCCAGAGGAAATGAGGAAAAAGGTTGAAGAGAGAGTTCGGAGGAAGGGTAGAGATTTCACAAAGTCTAAAACGGGTTCCATCCTTGCCTTCAAAGTCAGCTTTAGAGACTTCAATCCTCTCGATTCCTACATATGGTTTGAGTTGATTGGATCACCATCTGATCGAGATGTTGATCTTATTGGCAGTGTTGCGAATTCATCGATGGAGTACAATCCTGTGTATGATGCAGAAAAAGGGTTTAAAGTGATGCAGTCATCATTTCATGATATCAGTGATGTTGAGTTTCAGGACAACTGGGGCCGAGTTTGGGTCGACCTCGGTACGTCTGATTATTTGGCCATTGATGTACTTTTGAACTGTTTGACTGTTCTGAGCTCAGAATATTTAGGCATCCAACAAGTCATTTTCGGGGGACGTCGAATGGGCGATTGGGAAGAAGGAATGACAAGCCCCGAGTTCGGGTACAAATTTTTCAAAGTCTAA

Protein sequence

MSVFEVIGLGLAFRNATSTCNFLSNPGIFLKSVTPNREFQLISLRSRAMLSENGHESMFDAKSASTPTATDAKGSGTTARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAELRAVLGDSIGNPEEMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDFNPLDSYIWFELIGSPSDRDVDLIGSVANSSMEYNPVYDAEKGFKVMQSSFHDISDVEFQDNWGRVWVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVIFGGRRMGDWEEGMTSPEFGYKFFKV
Homology
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BLAST of CmaCh18G008410 vs. TrEMBL
Match: A0A068V8Y6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00018256001 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 5.2e-107
Identity = 192/238 (80.67%), Postives = 212/238 (89.08%), Query Frame = 1 

Query: 72  AKGSGTTARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAELRAVLGDSIGNPE 131
           +KGSGTTAR RRL+K+REEKRKRE+DRLHNYPAWAKVLEDACKNDAELRAVLGD+IGNPE
Sbjct: 23  SKGSGTTARGRRLIKVREEKRKREYDRLHNYPAWAKVLEDACKNDAELRAVLGDTIGNPE 82

Query: 132 EMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDFNPLDSYIWFELIGSPSDRDVDLIGS 191
            MRK+VEERVRRKGRDF KSKTGS+LAFKVSFRDFNPLDSYIWFEL GSPSDRDVDL+GS
Sbjct: 83  LMRKRVEERVRRKGRDFQKSKTGSVLAFKVSFRDFNPLDSYIWFELYGSPSDRDVDLLGS 142

Query: 192 V--------------------ANSSMEYNPVYDAEKGFKVMQSSFHDISDVEFQDNWGRV 251
           V                    ANSSMEY+P+YDA+KGFKVM SSFHDISDVEFQDNWGR+
Sbjct: 143 VIQSWYIMGRIGAFNSSNLQLANSSMEYDPLYDADKGFKVMPSSFHDISDVEFQDNWGRI 202

Query: 252 WVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVIFGGRRMGDWEEGMTSPEFGYKFFKV 290
           WVDLGTSD+ +ID+LLNCLTVLSSEY+GIQQVIFGGR++GDWEEGMTSPE+GYKFFK+
Sbjct: 203 WVDLGTSDFFSIDILLNCLTVLSSEYVGIQQVIFGGRKIGDWEEGMTSPEYGYKFFKI 260

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BLAST of CmaCh18G008410 vs. TrEMBL
Match: V4UC78_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015943mg PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.0e-106
Identity = 192/238 (80.67%), Postives = 210/238 (88.24%), Query Frame = 1 

Query: 72  AKGSGTTARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAELRAVLGDSIGNPE 131
           AKGSGT+AR RRLLK+REEKR+REHDRLHNYP+WAKVLEDACK+D ELRAVLGDSIGNPE
Sbjct: 85  AKGSGTSARGRRLLKVREEKRRREHDRLHNYPSWAKVLEDACKDDEELRAVLGDSIGNPE 144

Query: 132 EMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDFNPLDSYIWFELIGSPSDRDVDLIGS 191
            MRK+VEERVR+KGR+F KSKTGS+LAFKVSFRDFNPLDSYIWFEL GSPSDRDVDLIGS
Sbjct: 145 LMRKRVEERVRKKGRNFNKSKTGSVLAFKVSFRDFNPLDSYIWFELYGSPSDRDVDLIGS 204

Query: 192 V--------------------ANSSMEYNPVYDAEKGFKVMQSSFHDISDVEFQDNWGRV 251
           V                    ANSS+EY+P+YDAEKGF VM SSFHDISDVEFQDNWGRV
Sbjct: 205 VIQSWYVMGRLGAFNSSNLQLANSSIEYDPLYDAEKGFSVMPSSFHDISDVEFQDNWGRV 264

Query: 252 WVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVIFGGRRMGDWEEGMTSPEFGYKFFKV 290
           WVDLGTSD+ A+DVLLNCLTVLSSEYLGIQQ++FGGRRMGDWEEGMTSPEFGYK+FK+
Sbjct: 265 WVDLGTSDFFAVDVLLNCLTVLSSEYLGIQQIVFGGRRMGDWEEGMTSPEFGYKYFKI 322

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BLAST of CmaCh18G008410 vs. TrEMBL
Match: F6HVX8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0071g01140 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.0e-106
Identity = 196/253 (77.47%), Postives = 214/253 (84.58%), Query Frame = 1 

Query: 57  SMFDAKSASTPTATDAKGSGTTARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKND 116
           S+ D   A  P     KGSGTTAR RRLLKLREEKRKRE+DRLHNYPAWAKV+EDACK+D
Sbjct: 48  SLSDENEAGVPKG---KGSGTTARGRRLLKLREEKRKREYDRLHNYPAWAKVMEDACKDD 107

Query: 117 AELRAVLGDSIGNPEEMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDFNPLDSYIWFE 176
           +ELRAVLGDSIGNPE MRK+VEERVR+KGRDF KSKTGS+LA+KVSFRDFNP+DSYIWFE
Sbjct: 108 SELRAVLGDSIGNPELMRKRVEERVRKKGRDFRKSKTGSVLAYKVSFRDFNPVDSYIWFE 167

Query: 177 LIGSPSDRDVDLIGSV--------------------ANSSMEYNPVYDAEKGFKVMQSSF 236
           L GSPSDRDVDLIGSV                    ANSSMEYNP+YDA+KGFK+M SSF
Sbjct: 168 LYGSPSDRDVDLIGSVIQSWYVMGRLGAFNSSNLQLANSSMEYNPLYDADKGFKLMPSSF 227

Query: 237 HDISDVEFQDNWGRVWVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVIFGGRRMGDWEEG 290
           HDI DVEFQDNWGRVWVDLGTSD+ AIDVLLNCLTVLSSEYLGIQQV+FGGR MGDWEEG
Sbjct: 228 HDIGDVEFQDNWGRVWVDLGTSDFFAIDVLLNCLTVLSSEYLGIQQVVFGGRNMGDWEEG 287

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BLAST of CmaCh18G008410 vs. TrEMBL
Match: W9SFB2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011024 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 4.4e-106
Identity = 193/238 (81.09%), Postives = 208/238 (87.39%), Query Frame = 1 

Query: 72  AKGSGTTARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAELRAVLGDSIGNPE 131
           AKGSGTTAR RRLLKLREEKRKRE+DRLHNYP WAKVLEDACK+D ELRAVLGDSIGNPE
Sbjct: 65  AKGSGTTARGRRLLKLREEKRKREYDRLHNYPTWAKVLEDACKDDDELRAVLGDSIGNPE 124

Query: 132 EMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDFNPLDSYIWFELIGSPSDRDVDLIGS 191
            MRKKVEERVR+KGRDF KSKTGS+L+FKVSFRDFNP+DSYIWFEL GSPSDRDVDLIGS
Sbjct: 125 LMRKKVEERVRKKGRDFRKSKTGSVLSFKVSFRDFNPVDSYIWFELYGSPSDRDVDLIGS 184

Query: 192 V--------------------ANSSMEYNPVYDAEKGFKVMQSSFHDISDVEFQDNWGRV 251
           V                    ANSSM+Y+P+YDAEKGFKVM SSFHDI DVEFQDNWGRV
Sbjct: 185 VIQSWYVMGRLGSFNSTNLQLANSSMDYDPLYDAEKGFKVMPSSFHDIGDVEFQDNWGRV 244

Query: 252 WVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVIFGGRRMGDWEEGMTSPEFGYKFFKV 290
           WVDLGTSDY AIDVLLNCLTVLSSEYLGIQQ++FGGR MGDWEEGMT+PE+GYK+FK+
Sbjct: 245 WVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQIVFGGRGMGDWEEGMTNPEYGYKYFKI 302

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BLAST of CmaCh18G008410 vs. TrEMBL
Match: A0A0B2SCW4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_021604 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 2.2e-105
Identity = 193/283 (68.20%), Postives = 227/283 (80.21%), Query Frame = 1 

Query: 27  GIFLKSVTPNREFQLISLRSRAMLSENGHESMFDAKSASTPTATDAKGSGTTARSRRLLK 86
           G +  S T  R F+ + +   A+  +N H     + +         KGSGTTAR RRLL+
Sbjct: 22  GYWFPSSTTKRSFRPVLVSVSAISDDNSHSYTSSSSNGRKLEEEGIKGSGTTARDRRLLR 81

Query: 87  LREEKRKREHDRLHNYPAWAKVLEDACKNDAELRAVLGDSIGNPEEMRKKVEERVRRKGR 146
           +R+EKR+RE+DRL+NYPAWAKVLE+ACK+DAELRAVLGDSIGNPE MRK+VE+RVR+KGR
Sbjct: 82  IRQEKRQREYDRLNNYPAWAKVLENACKDDAELRAVLGDSIGNPELMRKRVEDRVRKKGR 141

Query: 147 DFTKSKTGSILAFKVSFRDFNPLDSYIWFELIGSPSDRDVDLIGSV-------------- 206
           DF KSKTGS+LAFKV+FRDFNPLDSYIWFEL GSPSDRDV+LIG+V              
Sbjct: 142 DFQKSKTGSVLAFKVTFRDFNPLDSYIWFELFGSPSDRDVNLIGNVIQSWYVMGRLGAFN 201

Query: 207 ------ANSSMEYNPVYDAEKGFKVMQSSFHDISDVEFQDNWGRVWVDLGTSDYLAIDVL 266
                 ANSS+EY+P+YDA+KGFKVM SSFHDISD+EFQ+NWGRVWVDLGTSDY AIDVL
Sbjct: 202 SSNLQLANSSVEYDPLYDADKGFKVMPSSFHDISDIEFQENWGRVWVDLGTSDYFAIDVL 261

Query: 267 LNCLTVLSSEYLGIQQVIFGGRRMGDWEEGMTSPEFGYKFFKV 290
           LNCLTVLSSEYLGIQQ++FGGRRMGDWEEGMTSPE+GYK+FK+
Sbjct: 262 LNCLTVLSSEYLGIQQIVFGGRRMGDWEEGMTSPEYGYKYFKI 304

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BLAST of CmaCh18G008410 vs. TAIR10
Match: AT5G08400.1 (AT5G08400.1 Protein of unknown function (DUF3531))

HSP 1 Score: 356.7 bits (914), Expect = 1.4e-98
Identity = 179/270 (66.30%), Postives = 206/270 (76.30%), Query Frame = 1 

Query: 73  KGSGTTARSRRLLKLREEKRKREHDRLHNYPAW--------------------------- 132
           KGSGTTAR RRLLK+REEKRKR++DRLH+YP+W                           
Sbjct: 64  KGSGTTARGRRLLKVREEKRKRDYDRLHDYPSWAKYLFLSFSFALQVFVFLPKSRESVNL 123

Query: 133 ------AKVLEDACKNDAELRAVLGDSIGNPEEMRKKVEERVRRKGRDFTKSKTGSILAF 192
                  +VLE ACK+D ELRAVLGDSIGNPE MRKKVEERVR+KG+DF K KTGS+L+F
Sbjct: 124 FLVNDKCRVLESACKDDEELRAVLGDSIGNPELMRKKVEERVRKKGKDFQKQKTGSVLSF 183

Query: 193 KVSFRDFNPLDSYIWFELIGSPSDRDVDLIGSV--------------------ANSSMEY 252
           KV+FRDFNP+DS+IWFEL G+PSDRDVDLIGSV                    AN+S+EY
Sbjct: 184 KVNFRDFNPVDSFIWFELYGTPSDRDVDLIGSVIQAWYVMGRLGAFNTSNLQLANTSLEY 243

Query: 253 NPVYDAEKGFKVMQSSFHDISDVEFQDNWGRVWVDLGTSDYLAIDVLLNCLTVLSSEYLG 290
           +P+YDAEKGFKVM SSFHDISDVEFQDNWGRVWVDLGTSD  A+DVLLNCLTV+SSEYLG
Sbjct: 244 DPLYDAEKGFKVMPSSFHDISDVEFQDNWGRVWVDLGTSDIFALDVLLNCLTVMSSEYLG 303

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BLAST of CmaCh18G008410 vs. TAIR10
Match: AT4G29400.1 (AT4G29400.1 Protein of unknown function (DUF3531))

HSP 1 Score: 149.8 bits (377), Expect = 2.5e-36
Identity = 74/194 (38.14%), Postives = 113/194 (58.25%), Query Frame = 1 

Query: 116 DAELRAVLGDSIGNPEEMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDFNPLDSYIWF 175
           D E   +LGD + NP++ +KK+EER+R+K      +KTGS  +  V+F  F   +SY+W 
Sbjct: 109 DPEFADILGDCLDNPDKAQKKMEERLRKKRNKILHTKTGSATSMPVTFNKFEYSNSYMWL 168

Query: 176 ELIGSPSDRDVDLIGSVANS--------------------SMEYNPVYDAEKGFKVMQSS 235
           E   +P D+D+ LI     S                     ++  P YDA  G  V  ++
Sbjct: 169 EFYNTPLDKDIALISDTIRSWHILGRLGGYNSMNMQLSQAPLDKRPNYDAILGANVEPTT 228

Query: 236 FHDISDVEFQDNWGRVWVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVIFGGRRMGDWEE 290
           F++I D+E QDN  R+W+D+GTS+ L +DVL+N LT +SS+Y+GI++V+FGG     W+E
Sbjct: 229 FYNIGDLEVQDNVARIWLDIGTSEPLILDVLINALTQISSDYVGIKKVVFGGSEFESWKE 288

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BLAST of CmaCh18G008410 vs. NCBI nr
Match: gi|449458716|ref|XP_004147093.1| (PREDICTED: uncharacterized protein LOC101211689 [Cucumis sativus])

HSP 1 Score: 488.0 bits (1255), Expect = 1.1e-134
Identity = 254/310 (81.94%), Postives = 266/310 (85.81%), Query Frame = 1 

Query: 1   MSVFEVIGLGLAFRNATSTCNFLSNPGIFLKSVTPNREFQLISLRSRAMLSENGHESMFD 60
           MSVF  IGLGLAF N  STC F SN   F +S+T   EF+ ISLRSRA+LSENG +S FD
Sbjct: 1   MSVFNGIGLGLAFTNPNSTCIFHSNTRFFPQSLTSIPEFRPISLRSRALLSENGDDSKFD 60

Query: 61  AKSASTPTATDAK-GSGTTARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAEL 120
           A S STPTATDAK  SGT+ARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAEL
Sbjct: 61  AVSTSTPTATDAKKSSGTSARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAEL 120

Query: 121 RAVLGDSIGNPEEMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDFNPLDSYIWFELIG 180
           RAVLGDSIGNPEEMRKKVEERVRRKGRDF KSKTGSILAFKVSFRDFNPLDSYIWFELIG
Sbjct: 121 RAVLGDSIGNPEEMRKKVEERVRRKGRDFQKSKTGSILAFKVSFRDFNPLDSYIWFELIG 180

Query: 181 SPSDRDVDLIGSV--------------------ANSSMEYNPVYDAEKGFKVMQSSFHDI 240
           SP+DRDVDLIGSV                    ANSSMEYNPVYDA+KGFKVMQSSFHDI
Sbjct: 181 SPTDRDVDLIGSVIQSWYVMGRLGAFNSSNLQLANSSMEYNPVYDADKGFKVMQSSFHDI 240

Query: 241 SDVEFQDNWGRVWVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVIFGGRRMGDWEEGMTS 290
           SDVEFQDNWGRVWVDLGTSDY AIDVLLNCLTVLSSEYLGIQQV+FGGRRMGDWEEGMTS
Sbjct: 241 SDVEFQDNWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTS 300

[Close]
BLAST of CmaCh18G008410 vs. NCBI nr
Match: gi|659090247|ref|XP_008445913.1| (PREDICTED: uncharacterized protein LOC103488796 [Cucumis melo])

HSP 1 Score: 483.0 bits (1242), Expect = 3.6e-133
Identity = 249/310 (80.32%), Postives = 262/310 (84.52%), Query Frame = 1 

Query: 1   MSVFEVIGLGLAFRNATSTCNFLSNPGIFLKSVTPNREFQLISLRSRAMLSENGHESMFD 60
           MSV   +GLGLAF N  STCNF SN   F +S+    EF  ISLRSRA+LSENG +S FD
Sbjct: 1   MSVLHGVGLGLAFTNPNSTCNFHSNTRFFPQSLASVPEFHPISLRSRALLSENGDDSKFD 60

Query: 61  AKSASTPTATDAK-GSGTTARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAEL 120
           A S STPT TD K  SGT+ARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAEL
Sbjct: 61  AMSTSTPTTTDPKKSSGTSARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAEL 120

Query: 121 RAVLGDSIGNPEEMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDFNPLDSYIWFELIG 180
           RAVLGDSIGNPEEMRKKVE+RVRRKGRDF KSKTGSILAFKVSFRDFNPLDSYIWFELIG
Sbjct: 121 RAVLGDSIGNPEEMRKKVEDRVRRKGRDFQKSKTGSILAFKVSFRDFNPLDSYIWFELIG 180

Query: 181 SPSDRDVDLIGSV--------------------ANSSMEYNPVYDAEKGFKVMQSSFHDI 240
           SP+DRDVDLIGS+                    ANSSMEYNPVYDA+KGFKVMQSSFHDI
Sbjct: 181 SPTDRDVDLIGSIIQSWYVMGRLGAFNSSNLQLANSSMEYNPVYDADKGFKVMQSSFHDI 240

Query: 241 SDVEFQDNWGRVWVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVIFGGRRMGDWEEGMTS 290
           SDVEFQDNWGRVWVDLGTSDY AIDVLLNCLTVLSSEYLGIQQV+FGGRRMGDWEEGMTS
Sbjct: 241 SDVEFQDNWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTS 300

[Close]
BLAST of CmaCh18G008410 vs. NCBI nr
Match: gi|661879946|emb|CDP16398.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 395.6 bits (1015), Expect = 7.5e-107
Identity = 192/238 (80.67%), Postives = 212/238 (89.08%), Query Frame = 1 

Query: 72  AKGSGTTARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAELRAVLGDSIGNPE 131
           +KGSGTTAR RRL+K+REEKRKRE+DRLHNYPAWAKVLEDACKNDAELRAVLGD+IGNPE
Sbjct: 23  SKGSGTTARGRRLIKVREEKRKREYDRLHNYPAWAKVLEDACKNDAELRAVLGDTIGNPE 82

Query: 132 EMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDFNPLDSYIWFELIGSPSDRDVDLIGS 191
            MRK+VEERVRRKGRDF KSKTGS+LAFKVSFRDFNPLDSYIWFEL GSPSDRDVDL+GS
Sbjct: 83  LMRKRVEERVRRKGRDFQKSKTGSVLAFKVSFRDFNPLDSYIWFELYGSPSDRDVDLLGS 142

Query: 192 V--------------------ANSSMEYNPVYDAEKGFKVMQSSFHDISDVEFQDNWGRV 251
           V                    ANSSMEY+P+YDA+KGFKVM SSFHDISDVEFQDNWGR+
Sbjct: 143 VIQSWYIMGRIGAFNSSNLQLANSSMEYDPLYDADKGFKVMPSSFHDISDVEFQDNWGRI 202

Query: 252 WVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVIFGGRRMGDWEEGMTSPEFGYKFFKV 290
           WVDLGTSD+ +ID+LLNCLTVLSSEY+GIQQVIFGGR++GDWEEGMTSPE+GYKFFK+
Sbjct: 203 WVDLGTSDFFSIDILLNCLTVLSSEYVGIQQVIFGGRKIGDWEEGMTSPEYGYKFFKI 260

[Close]
BLAST of CmaCh18G008410 vs. NCBI nr
Match: gi|297742705|emb|CBI35339.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 393.7 bits (1010), Expect = 2.9e-106
Identity = 196/253 (77.47%), Postives = 214/253 (84.58%), Query Frame = 1 

Query: 57  SMFDAKSASTPTATDAKGSGTTARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKND 116
           S+ D   A  P     KGSGTTAR RRLLKLREEKRKRE+DRLHNYPAWAKV+EDACK+D
Sbjct: 79  SLSDENEAGVPKG---KGSGTTARGRRLLKLREEKRKREYDRLHNYPAWAKVMEDACKDD 138

Query: 117 AELRAVLGDSIGNPEEMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDFNPLDSYIWFE 176
           +ELRAVLGDSIGNPE MRK+VEERVR+KGRDF KSKTGS+LA+KVSFRDFNP+DSYIWFE
Sbjct: 139 SELRAVLGDSIGNPELMRKRVEERVRKKGRDFRKSKTGSVLAYKVSFRDFNPVDSYIWFE 198

Query: 177 LIGSPSDRDVDLIGSV--------------------ANSSMEYNPVYDAEKGFKVMQSSF 236
           L GSPSDRDVDLIGSV                    ANSSMEYNP+YDA+KGFK+M SSF
Sbjct: 199 LYGSPSDRDVDLIGSVIQSWYVMGRLGAFNSSNLQLANSSMEYNPLYDADKGFKLMPSSF 258

Query: 237 HDISDVEFQDNWGRVWVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVIFGGRRMGDWEEG 290
           HDI DVEFQDNWGRVWVDLGTSD+ AIDVLLNCLTVLSSEYLGIQQV+FGGR MGDWEEG
Sbjct: 259 HDIGDVEFQDNWGRVWVDLGTSDFFAIDVLLNCLTVLSSEYLGIQQVVFGGRNMGDWEEG 318

[Close]
BLAST of CmaCh18G008410 vs. NCBI nr
Match: gi|567912383|ref|XP_006448505.1| (hypothetical protein CICLE_v10015943mg [Citrus clementina])

HSP 1 Score: 393.7 bits (1010), Expect = 2.9e-106
Identity = 192/238 (80.67%), Postives = 210/238 (88.24%), Query Frame = 1 

Query: 72  AKGSGTTARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAELRAVLGDSIGNPE 131
           AKGSGT+AR RRLLK+REEKR+REHDRLHNYP+WAKVLEDACK+D ELRAVLGDSIGNPE
Sbjct: 85  AKGSGTSARGRRLLKVREEKRRREHDRLHNYPSWAKVLEDACKDDEELRAVLGDSIGNPE 144

Query: 132 EMRKKVEERVRRKGRDFTKSKTGSILAFKVSFRDFNPLDSYIWFELIGSPSDRDVDLIGS 191
            MRK+VEERVR+KGR+F KSKTGS+LAFKVSFRDFNPLDSYIWFEL GSPSDRDVDLIGS
Sbjct: 145 LMRKRVEERVRKKGRNFNKSKTGSVLAFKVSFRDFNPLDSYIWFELYGSPSDRDVDLIGS 204

Query: 192 V--------------------ANSSMEYNPVYDAEKGFKVMQSSFHDISDVEFQDNWGRV 251
           V                    ANSS+EY+P+YDAEKGF VM SSFHDISDVEFQDNWGRV
Sbjct: 205 VIQSWYVMGRLGAFNSSNLQLANSSIEYDPLYDAEKGFSVMPSSFHDISDVEFQDNWGRV 264

Query: 252 WVDLGTSDYLAIDVLLNCLTVLSSEYLGIQQVIFGGRRMGDWEEGMTSPEFGYKFFKV 290
           WVDLGTSD+ A+DVLLNCLTVLSSEYLGIQQ++FGGRRMGDWEEGMTSPEFGYK+FK+
Sbjct: 265 WVDLGTSDFFAVDVLLNCLTVLSSEYLGIQQIVFGGRRMGDWEEGMTSPEFGYKYFKI 322

The following BLAST results are available for this feature:
BLAST of CmaCh18G008410 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh18G008410 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A068V8Y6_COFCA5.2e-10780.67Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00018256001 PE=4 SV=1[more]
V4UC78_9ROSI2.0e-10680.67Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015943mg PE=4 SV=1[more]
F6HVX8_VITVI2.0e-10677.47Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0071g01140 PE=4 SV=... [more]
W9SFB2_9ROSA4.4e-10681.09Uncharacterized protein OS=Morus notabilis GN=L484_011024 PE=4 SV=1[more]
A0A0B2SCW4_GLYSO2.2e-10568.20Uncharacterized protein OS=Glycine soja GN=glysoja_021604 PE=4 SV=1[more]
BLAST of CmaCh18G008410 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G08400.11.4e-9866.30 Protein of unknown function (DUF3531)[more]
AT4G29400.12.5e-3638.14 Protein of unknown function (DUF3531)[more]
BLAST of CmaCh18G008410 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449458716|ref|XP_004147093.1|1.1e-13481.94PREDICTED: uncharacterized protein LOC101211689 [Cucumis sativus][more]
gi|659090247|ref|XP_008445913.1|3.6e-13380.32PREDICTED: uncharacterized protein LOC103488796 [Cucumis melo][more]
gi|661879946|emb|CDP16398.1|7.5e-10780.67unnamed protein product [Coffea canephora][more]
gi|297742705|emb|CBI35339.3|2.9e-10677.47unnamed protein product [Vitis vinifera][more]
gi|567912383|ref|XP_006448505.1|2.9e-10680.67hypothetical protein CICLE_v10015943mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021920DUF3531
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010207 photosystem II assembly
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G008410.1CmaCh18G008410.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021920Protein of unknown function DUF3531PFAMPF12049DUF3531coord: 194..278
score: 2.3
NoneNo IPR availablePANTHERPTHR33102FAMILY NOT NAMEDcoord: 29..289
score: 2.9E
NoneNo IPR availablePANTHERPTHR33102:SF13DVL17coord: 29..289
score: 2.9E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh18G008410Cucsa.281100Cucumber (Gy14) v1cgycmaB0778
CmaCh18G008410Cla022886Watermelon (97103) v1cmawmB400
CmaCh18G008410Csa5G580640Cucumber (Chinese Long) v2cmacuB418
CmaCh18G008410MELO3C011773Melon (DHL92) v3.5.1cmameB352
CmaCh18G008410ClCG11G012820Watermelon (Charleston Gray)cmawcgB339
CmaCh18G008410CSPI05G20460Wild cucumber (PI 183967)cmacpiB424
CmaCh18G008410CmoCh18G008450Cucurbita moschata (Rifu)cmacmoB406
CmaCh18G008410Lsi04G000030Bottle gourd (USVL1VR-Ls)cmalsiB379
CmaCh18G008410Lsi04G007650Bottle gourd (USVL1VR-Ls)cmalsiB380
CmaCh18G008410Cp4.1LG01g10080Cucurbita pepo (Zucchini)cmacpeB434
CmaCh18G008410Cp4.1LG09g04590Cucurbita pepo (Zucchini)cmacpeB415
CmaCh18G008410MELO3C011773.2Melon (DHL92) v3.6.1cmamedB409
CmaCh18G008410CsaV3_5G029220Cucumber (Chinese Long) v3cmacucB0499
CmaCh18G008410Cla97C11G218700Watermelon (97103) v2cmawmbB409
CmaCh18G008410Bhi07G000941Wax gourdcmawgoB0545
CmaCh18G008410CsGy5G019980Cucumber (Gy14) v2cgybcmaB627
CmaCh18G008410Carg02040Silver-seed gourdcarcmaB1166
CmaCh18G008410Carg14425Silver-seed gourdcarcmaB1012
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh18G008410CmaCh04G012760Cucurbita maxima (Rimu)cmacmaB407
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh18G008410Silver-seed gourdcarcmaB1167
CmaCh18G008410Wax gourdcmawgoB0540
CmaCh18G008410Cucurbita maxima (Rimu)cmacmaB402
CmaCh18G008410Cucurbita moschata (Rifu)cmacmoB420
CmaCh18G008410Cucurbita pepo (Zucchini)cmacpeB429
CmaCh18G008410Bottle gourd (USVL1VR-Ls)cmalsiB384