Cla022886 (gene) Watermelon (97103) v1

Overview
NameCla022886
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionOxidoreductase/ transition metal ion binding protein (AHRD V1 **-- D7MCM0_ARALL)
LocationChr11 : 15272109 .. 15275929 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCGTGTTCAAGGGCGTCGGATTAGGTTTAACGTTTACGATTGCCAATTTCAGTTGCTATTTTCCTTCTAATACAAGAATCTTCCCCCAATCTGTCACTTCAAACCCTGAATTTTATCCAATTTCACTTCGTTCTCGTGCATTGCTTTCTGAAAATGGCGACGATTCTAAGTTTGACGCCAAGAGTACTTCTACATCCACTACAACTGATGCTAAGAGCTCTGGAACCTCTGCTAGAAGTCGTCGATTGCTTAAGCTTCGTGAAGAGAAGCGCAAACGGGAACATGATCGTCTCCATAATTACCCTGCCTGGGCGAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTTTTCTGTATGAATGTGTGTTGCGTTTTGTTTGATTGCTAACGAAATCGCTGGGAAAACGACAGAGTGTTAGAAGATGCCTGCAAAAATGATGCGGAATTACGCGCTGTTCTTGGCGATAGCATTGGCAATCCAGAGGAAATGAGGAAAAAGGTACATCGGTTTGGCTTATACTCATCTTATTCATTTGATTTTTATTAATATCGGTTTGTTGTAATTGAATTTGCTCATTCGTTATTTCATTTCCTGTTTGTACATTTCTTATTGTGTCATTTTTTAAACTCATTGTTCAGGTTACTTTCACTTCCGTTTGAGCGACTAGAAACCTTAACAAAATGATTGAAACTAATTTGTAGCATATTCACAATTTAGGATTTAACGTTTCCTTGATATATTCTTAATTCGTCGGTATGACGTCTGAGAAGATAAGATTCACCTTATTATCTTCTTGCAGTTACGAGCATCGAGTAGGACTGTTGTATATCTTGTTGATATAGTTGAATATGGTGTTTACTGTCAGAAACTTGGAAAGTTCTAGGTAGTAATTTATCTCAACGATGAGCATTTTCTGGATAATCAACAGGACTGTTTTATTAGTTTGTCGTTTCGTATGCTGCGCACTTTACTTATATTCTAGTATTGGATCTTCAAAACATTTGGCTGGAGAAGTTTCTCATATGACTGATAATTCGTATATAAATATCTTGAAAATGAAATTATTTCACATCTATTGTCAATCACAAGCCATCAGCTTCTTATTAGAGTATCAGAACCAGTTTGAATCTCATGTCTTGAACATTTGTCTATGATTGCACTCACATAGAACTGATGAACAGAATAAGCTTCTTTCAGTGAGGTATCACTTATCAACCAGAAGAAAAAAAAAACTTCTAATTTTTTTCATGCAATTCCTGTTAAATAATGGTGTTTTCTTGTCTTTGTGCATAGTTATATCTTCCAATATATTATGACAGGTTGAAGAGAGAGTTCGGAGGAAGGGTAGAGACTTCCAAAAGTCTAAAACGGGTTCCATCCTTGCCTTCAAAGTCAGCTTTAGAGAGTAATCTATTCAATTAATAGCCCCTTATTTGTTTACTGTCCTTTTTTGTCCTCACTAGTATAACCTTATTTCCGGTGCCAAAATCAAAGCTGAATCCTCCATCATGAAAGAAAAGAGATTTCACCCCATTGCCAATTCCTTTTTTTCAATTCCATTTTTTTCTTGCAATCGATTAAATATGATTTTGTTCTTCTCAATTGCTGAGGTTTCAAATCTGTTTGAAGAAAACATTTAAGACTCAAAAGGTGTAAGTCCTGGCGTCTACTGGTTCAGCACAAGTTCTCTTTTAACGCAGCTGTATCTTAATAAAATAAGTTTTCATCATGGCTTCCCTGCACAATATGATTTAGTTTCAACTTTGGGTTTCCGAATGTGCTAGTCATAAATTTTTTATTGTGTTCTTTTACATTTTTTATATGTTAAAGAATGATAGGATATCGTGACTGCTTTACAGGCCCTATTATGGTTAAAGATTTTCTTGTCTTCTTAGCTAATTTGGGGATGGGAATATGCATTCTGGTTGTTTGTTTATTTATTCTATTCGCTCACTAGTGTACTTACTAGTTAACTATCTGAAGTATATTGATGGGGAGGTTGGTCATAATTTACATGTTGGATCATGATTAATTTCTACGTCAATGACTATATAATCATTTAAAACCCCATAAACTAGTTTTTCTTCTTTTTGGTAAATTTGGCAATAGTCCGTTGTAAAACTGAACAATCCCGGGATACAAGATTATTGGAGTTCTGCTATACACTTGTTGACATCTTTGAGCATCCTCTGGCTTATTTTTTTCCTAGTTTCTTGATTAATTAACCGGTTTTAAGGATAACCACTCTTGTTTATGCACTTATATTTATCGATGCATGTTTGCTTCATGTCTTGGGAAATATTTAGTCAACCTTGAGCTGCTAATGAAGTGACAATTGTTCATATTATCATTGATGTGGTGATAAATTGTTCATTTAACTTTTCAGACATTCAAACTTTACCATTTTAAGTTACTGATCATCCTTTTCCCTCTGTTTTCCCGCACAGCTTCAATCCTCTTGATTCCTACATATGGTTTGAGCTGATTGGATCGCCATCTGATCGAGATGTTGATCTTATTGGCAGTGTAAGTTTATTCTTATTGCCGTAGAATGATTTTCATTGGCAGGACTACTTTTTTCATTAAGCTGCTCAAACTTTATAATGTCCATCTTCCATTTTTCCCCCCTTTCTCTGTGCATCCACGAATGACCTTTAACTTGTAGTCTATATTTCTTACATTACAAGTAACCATGCAGGTTATCCAGTCATGGTATGTCATGGGTCGATTGGGGGCCTTTAACTCTTCAAATTTGCAGGTTTCTTCATATATCCTTGAACCTAATTGATCTACTTCATTGAAGTGCCTTGCCTAAATGATCTTAAGTCAGTTACACGTCTTCTTTTCTCACCTATTACGCAATTATAAATTAGTTCTTTAGTTATTCTATTTACTTATGTATTGGAAAGAGAGGAAGGTCCTTTTGCCAGTTTTTCAATATTTTCTACGTGATATTTTGTCTTGTGGGGAAAACATTTACCTGATGAATGTATTGCATAGACTACTTAACTAGCTTGTCAGCTTTATATGGTTGAAAGTAGGCACTCTAGTTTGGATGTACTCTGGATCACTATTCCCTTCATGCTCATACTGCTGAAAAACGAAACTTTGGTCAATGTTAAAACACTTATCTTTTTCCTTTTTTCCTTTTTTCCTTTTTTGTGGTAAAAGGAAAAAAACACGGTCAATTCAATATGAATTTGGTTTATCCGTAGGCAGTTTATATATCCTACAGGCTACAGCATTCTAGTTTACCCTTTTGTTTCCTTTCTTTTTTGCTGTTAATTGCAGCTGGCGAATTCATCCATGGAGTACAATCCTATCTACGATGCAGATAAAGGGTTTAAAGTGATGCAGTCATCATTTCATGATATCAGTGATGTTGAGTTTCAGGATAACTGGGGCCGGGTTTGGTAAGAGTTCTTGAAATTAACCGTATTCCCATTGTTCGATGCTATTTTGTATGCCTCTGTATTATGGAACTGAAACAAGTTGTTATATAATGTGTGGCAGGGTTGACCTTGGTACGTCCGATTATTTCGCCATTGATGTACTATTAAACTGCTTGACTGTTCTAAGCTCAGAGTAAGTTCGAGTTTGTCAACTTTGTATTTTAACTTTTTACGATAGTTTCTGGACTAATACATGTAAAGTTTTAGATACTCATCTTATCTAATAGAGGAACTTGTTTAATTTTTTACTTTGACCTGCAGATATTTAGGCATCCAACAAGTTGTGTTTGGGGGACGTCGAATGGGCGATTGGGAAGAAGGGATGACAAGCCCCGAGTATGGGTACAAGTATTTCAAAATCTAA

mRNA sequence

ATGTCCGTGTTCAAGGGCGTCGGATTAGGTTTAACGTTTACGATTGCCAATTTCAGTTGCTATTTTCCTTCTAATACAAGAATCTTCCCCCAATCTGTCACTTCAAACCCTGAATTTTATCCAATTTCACTTCGTTCTCGTGCATTGCTTTCTGAAAATGGCGACGATTCTAAGTTTGACGCCAAGAGTACTTCTACATCCACTACAACTGATGCTAAGAGCTCTGGAACCTCTGCTAGAAGTCGTCGATTGCTTAAGCTTCGTGAAGAGAAGCGCAAACGGGAACATGATCGTCTCCATAATTACCCTGCCTGGGCGAACTTCAATCCTCTTGATTCCTACATATGGTTTGAGCTGATTGGATCGCCATCTGATCGAGATGTTGATCTTATTGGCAGTCTGGCGAATTCATCCATGGAGTACAATCCTATCTACGATGCAGATAAAGGGTTTAAAGTGATGCAGTCATCATTTCATGATATCAGTGATGTTGAGTTTCAGGATAACTGGGGCCGGGTTTGGGTTGACCTTGGTACGTCCGATTATTTCGCCATTGATGTACTATTAAACTGCTTGACTGTTCTAAGCTCAGAATATTTAGGCATCCAACAAGTTGTGTTTGGGGGACGTCGAATGGGCGATTGGGAAGAAGGGATGACAAGCCCCGAGTATGGGTACAAGTATTTCAAAATCTAA

Coding sequence (CDS)

ATGTCCGTGTTCAAGGGCGTCGGATTAGGTTTAACGTTTACGATTGCCAATTTCAGTTGCTATTTTCCTTCTAATACAAGAATCTTCCCCCAATCTGTCACTTCAAACCCTGAATTTTATCCAATTTCACTTCGTTCTCGTGCATTGCTTTCTGAAAATGGCGACGATTCTAAGTTTGACGCCAAGAGTACTTCTACATCCACTACAACTGATGCTAAGAGCTCTGGAACCTCTGCTAGAAGTCGTCGATTGCTTAAGCTTCGTGAAGAGAAGCGCAAACGGGAACATGATCGTCTCCATAATTACCCTGCCTGGGCGAACTTCAATCCTCTTGATTCCTACATATGGTTTGAGCTGATTGGATCGCCATCTGATCGAGATGTTGATCTTATTGGCAGTCTGGCGAATTCATCCATGGAGTACAATCCTATCTACGATGCAGATAAAGGGTTTAAAGTGATGCAGTCATCATTTCATGATATCAGTGATGTTGAGTTTCAGGATAACTGGGGCCGGGTTTGGGTTGACCTTGGTACGTCCGATTATTTCGCCATTGATGTACTATTAAACTGCTTGACTGTTCTAAGCTCAGAATATTTAGGCATCCAACAAGTTGTGTTTGGGGGACGTCGAATGGGCGATTGGGAAGAAGGGATGACAAGCCCCGAGTATGGGTACAAGTATTTCAAAATCTAA

Protein sequence

MSVFKGVGLGLTFTIANFSCYFPSNTRIFPQSVTSNPEFYPISLRSRALLSENGDDSKFDAKSTSTSTTTDAKSSGTSARSRRLLKLREEKRKREHDRLHNYPAWANFNPLDSYIWFELIGSPSDRDVDLIGSLANSSMEYNPIYDADKGFKVMQSSFHDISDVEFQDNWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTSPEYGYKYFKI
Homology
[Close]
BLAST of Cla022886 vs. TrEMBL
Match: F6HVX8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0071g01140 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.0e-60
Identity = 125/186 (67.20%), Postives = 137/186 (73.66%), Query Frame = 1 

Query: 76  GTSARSRRLLKLREEKRKREHDR----------LHNYPAWANFNPLDSYIWFELIGSPSD 135
           G S  +  L++ R E+R R+  R          L    ++ +FNP+DSYIWFEL GSPSD
Sbjct: 112 GDSIGNPELMRKRVEERVRKKGRDFRKSKTGSVLAYKVSFRDFNPVDSYIWFELYGSPSD 171

Query: 136 RDVDLIGS--------------------LANSSMEYNPIYDADKGFKVMQSSFHDISDVE 195
           RDVDLIGS                    LANSSMEYNP+YDADKGFK+M SSFHDI DVE
Sbjct: 172 RDVDLIGSVIQSWYVMGRLGAFNSSNLQLANSSMEYNPLYDADKGFKLMPSSFHDIGDVE 231

Query: 196 FQDNWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTSPEYG 232
           FQDNWGRVWVDLGTSD+FAIDVLLNCLTVLSSEYLGIQQVVFGGR MGDWEEGMTSPEYG
Sbjct: 232 FQDNWGRVWVDLGTSDFFAIDVLLNCLTVLSSEYLGIQQVVFGGRNMGDWEEGMTSPEYG 291

[Close]
BLAST of Cla022886 vs. TrEMBL
Match: F6HVX8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0071g01140 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.5e-08
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 1 

Query: 73  KSSGTSARSRRLLKLREEKRKREHDRLHNYPAWA 107
           K SGT+AR RRLLKLREEKRKRE+DRLHNYPAWA
Sbjct: 61  KGSGTTARGRRLLKLREEKRKREYDRLHNYPAWA 94


HSP 2 Score: 239.6 bits (610), Expect = 3.8e-60
Identity = 124/186 (66.67%), Postives = 136/186 (73.12%), Query Frame = 1 

Query: 76  GTSARSRRLLKLREEKRKREHDR----------LHNYPAWANFNPLDSYIWFELIGSPSD 135
           G S  +  L++ R E R R+  R          L     + +FNPLDSYIWFEL G PSD
Sbjct: 105 GDSIGNPELMRKRVEDRVRKKGRDFQKSKTGSVLAYKVTFRDFNPLDSYIWFELFGPPSD 164

Query: 136 RDVDLIGS--------------------LANSSMEYNPIYDADKGFKVMQSSFHDISDVE 195
           RDV+LIG+                    LANSSMEY+P+YDADKGFKVM SSFHDISD+E
Sbjct: 165 RDVNLIGNVIQSWYVMGRLGAFNSSNLQLANSSMEYDPLYDADKGFKVMPSSFHDISDIE 224

Query: 196 FQDNWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTSPEYG 232
           FQDNWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMT+PEYG
Sbjct: 225 FQDNWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTNPEYG 284

[Close]
BLAST of Cla022886 vs. TrEMBL
Match: A0A151RI45_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_036360 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.4e-06
Identity = 28/46 (60.87%), Postives = 37/46 (80.43%), Query Frame = 1 

Query: 61  AKSTSTSTTTDAKSSGTSARSRRLLKLREEKRKREHDRLHNYPAWA 107
           A S+S     + K SGT+AR RRLL++REEK++RE+DRL+NYPAWA
Sbjct: 42  ASSSSGRREENIKGSGTTARGRRLLRIREEKQQREYDRLNNYPAWA 87


HSP 2 Score: 239.2 bits (609), Expect = 5.0e-60
Identity = 122/186 (65.59%), Postives = 138/186 (74.19%), Query Frame = 1 

Query: 76  GTSARSRRLLKLREEKRKREHDRLHNYP----------AWANFNPLDSYIWFELIGSPSD 135
           G S  +  L++ R E+R R+  R  N            ++ +FNPLDSYIWFEL GSPSD
Sbjct: 137 GDSIGNPELMRKRVEERVRKKGRNFNKSKTGSVLAFKVSFRDFNPLDSYIWFELYGSPSD 196

Query: 136 RDVDLIGS--------------------LANSSMEYNPIYDADKGFKVMQSSFHDISDVE 195
           RDVDLIGS                    LANSS+EY+P+YDA+KGF VM SSFHDISDVE
Sbjct: 197 RDVDLIGSVIQSWYVMGRLGAFNSSNLQLANSSIEYDPLYDAEKGFSVMPSSFHDISDVE 256

Query: 196 FQDNWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTSPEYG 232
           FQDNWGRVWVDLGTSD+FA+DVLLNCLTVLSSEYLGIQQ+VFGGRRMGDWEEGMTSPE+G
Sbjct: 257 FQDNWGRVWVDLGTSDFFAVDVLLNCLTVLSSEYLGIQQIVFGGRRMGDWEEGMTSPEFG 316

[Close]
BLAST of Cla022886 vs. TrEMBL
Match: V4UC78_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015943mg PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.1e-09
Identity = 44/97 (45.36%), Postives = 54/97 (55.67%), Query Frame = 1 

Query: 13  FTIANFSCYFP-SNTRIFP--QSVTSNPEFYPISLRSRALLSENGDDSKFDAKSTSTSTT 72
           F  +N    FP S +  F   ++    P   PI     A  SE+G  S   +     +  
Sbjct: 29  FGASNSLTVFPNSKSECFSVIKTAKKGPRLQPI----HAAASEDGGRSS--SGRNERNEV 88

Query: 73  TDAKSSGTSARSRRLLKLREEKRKREHDRLHNYPAWA 107
             AK SGTSAR RRLLK+REEKR+REHDRLHNYP+WA
Sbjct: 89  VGAKGSGTSARGRRLLKVREEKRRREHDRLHNYPSWA 119


HSP 2 Score: 238.8 bits (608), Expect = 6.5e-60
Identity = 123/186 (66.13%), Postives = 137/186 (73.66%), Query Frame = 1 

Query: 76  GTSARSRRLLKLREEKRKREHDR----------LHNYPAWANFNPLDSYIWFELIGSPSD 135
           G S  +  L++ R E R R+  R          L     + +FNPLDSYIWFEL GSPSD
Sbjct: 119 GDSIGNPELMRKRVEDRVRKKGRDFQKSKTGSVLAFKVTFRDFNPLDSYIWFELFGSPSD 178

Query: 136 RDVDLIGS--------------------LANSSMEYNPIYDADKGFKVMQSSFHDISDVE 195
           RDV+LIG+                    LANSS+EY+P+YDADKGFKVM SSFHDISD+E
Sbjct: 179 RDVNLIGNVIQSWYVMGRLGAFNSSNLQLANSSVEYDPLYDADKGFKVMPSSFHDISDIE 238

Query: 196 FQDNWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTSPEYG 232
           FQ+NWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQ+VFGGRRMGDWEEGMTSPEYG
Sbjct: 239 FQENWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQIVFGGRRMGDWEEGMTSPEYG 298

[Close]
BLAST of Cla022886 vs. TrEMBL
Match: A0A0B2SCW4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_021604 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 9.9e-08
Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 1 

Query: 29  FPQSVTSNPEFYPISLRSRALLSENGDDSKFDAKSTSTSTTTDAKSSGTSARSRRLLKLR 88
           FP S T    F P+ +   A+  +N       + +         K SGT+AR RRLL++R
Sbjct: 25  FPSSTTKR-SFRPVLVSVSAISDDNSHSYTSSSSNGRKLEEEGIKGSGTTARDRRLLRIR 84

Query: 89  EEKRKREHDRLHNYPAWA 107
           +EKR+RE+DRL+NYPAWA
Sbjct: 85  QEKRQREYDRLNNYPAWA 101


HSP 2 Score: 238.8 bits (608), Expect = 6.5e-60
Identity = 123/186 (66.13%), Postives = 137/186 (73.66%), Query Frame = 1 

Query: 76  GTSARSRRLLKLREEKRKREHDR----------LHNYPAWANFNPLDSYIWFELIGSPSD 135
           G S  +  L++ R E R R+  R          L     + +FNPLDSYIWFEL GSPSD
Sbjct: 116 GDSIGNPELMRKRVEDRVRKKGRDFQKSKTGSVLAFKVTFRDFNPLDSYIWFELFGSPSD 175

Query: 136 RDVDLIGS--------------------LANSSMEYNPIYDADKGFKVMQSSFHDISDVE 195
           RDV+LIG+                    LANSS+EY+P+YDADKGFKVM SSFHDISD+E
Sbjct: 176 RDVNLIGNVIQSWYVMGRLGAFNSSNLQLANSSVEYDPLYDADKGFKVMPSSFHDISDIE 235

Query: 196 FQDNWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTSPEYG 232
           FQ+NWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQ+VFGGRRMGDWEEGMTSPEYG
Sbjct: 236 FQENWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQIVFGGRRMGDWEEGMTSPEYG 295

[Close]
BLAST of Cla022886 vs. NCBI nr
Match: gi|449458716|ref|XP_004147093.1| (PREDICTED: uncharacterized protein LOC101211689 [Cucumis sativus])

HSP 1 Score: 267.7 bits (683), Expect = 1.9e-68
Identity = 159/310 (51.29%), Postives = 180/310 (58.06%), Query Frame = 1 

Query: 1   MSVFKGVGLGLTFTIANFSCYFPSNTRIFPQ----------------------------- 60
           MSVF G+GLGL FT  N +C F SNTR FPQ                             
Sbjct: 1   MSVFNGIGLGLAFTNPNSTCIFHSNTRFFPQSLTSIPEFRPISLRSRALLSENGDDSKFD 60

Query: 61  -------SVTSNPEFYPISLRSRALLSENGDDSKFD----------AKSTSTSTTTDAK- 120
                  + T   +    S RSR LL    +  K +          AK    +   DA+ 
Sbjct: 61  AVSTSTPTATDAKKSSGTSARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAEL 120

Query: 121 ------SSGTSARSRRLLKLREEKRKREHDR------LHNYPAWANFNPLDSYIWFELIG 180
                 S G     R+ ++ R  ++ R+  +      L    ++ +FNPLDSYIWFELIG
Sbjct: 121 RAVLGDSIGNPEEMRKKVEERVRRKGRDFQKSKTGSILAFKVSFRDFNPLDSYIWFELIG 180

Query: 181 SPSDRDVDLIGS--------------------LANSSMEYNPIYDADKGFKVMQSSFHDI 232
           SP+DRDVDLIGS                    LANSSMEYNP+YDADKGFKVMQSSFHDI
Sbjct: 181 SPTDRDVDLIGSVIQSWYVMGRLGAFNSSNLQLANSSMEYNPVYDADKGFKVMQSSFHDI 240

[Close]
BLAST of Cla022886 vs. NCBI nr
Match: gi|659090247|ref|XP_008445913.1| (PREDICTED: uncharacterized protein LOC103488796 [Cucumis melo])

HSP 1 Score: 265.8 bits (678), Expect = 7.2e-68
Identity = 160/310 (51.61%), Postives = 179/310 (57.74%), Query Frame = 1 

Query: 1   MSVFKGVGLGLTFTIANFSCYFPSNTRIFPQ----------------------------- 60
           MSV  GVGLGL FT  N +C F SNTR FPQ                             
Sbjct: 1   MSVLHGVGLGLAFTNPNSTCNFHSNTRFFPQSLASVPEFHPISLRSRALLSENGDDSKFD 60

Query: 61  -------SVTSNPEFYPISLRSRALLSENGDDSKFD----------AKSTSTSTTTDAK- 120
                  + T   +    S RSR LL    +  K +          AK    +   DA+ 
Sbjct: 61  AMSTSTPTTTDPKKSSGTSARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAEL 120

Query: 121 ------SSGTSARSRRLLKLREEKRKREHDR------LHNYPAWANFNPLDSYIWFELIG 180
                 S G     R+ ++ R  ++ R+  +      L    ++ +FNPLDSYIWFELIG
Sbjct: 121 RAVLGDSIGNPEEMRKKVEDRVRRKGRDFQKSKTGSILAFKVSFRDFNPLDSYIWFELIG 180

Query: 181 SPSDRDVDLIGS--------------------LANSSMEYNPIYDADKGFKVMQSSFHDI 232
           SP+DRDVDLIGS                    LANSSMEYNP+YDADKGFKVMQSSFHDI
Sbjct: 181 SPTDRDVDLIGSIIQSWYVMGRLGAFNSSNLQLANSSMEYNPVYDADKGFKVMQSSFHDI 240

[Close]
BLAST of Cla022886 vs. NCBI nr
Match: gi|225463813|ref|XP_002271050.1| (PREDICTED: uncharacterized protein LOC100262808 [Vitis vinifera])

HSP 1 Score: 241.5 bits (615), Expect = 1.4e-60
Identity = 125/186 (67.20%), Postives = 137/186 (73.66%), Query Frame = 1 

Query: 76  GTSARSRRLLKLREEKRKREHDR----------LHNYPAWANFNPLDSYIWFELIGSPSD 135
           G S  +  L++ R E+R R+  R          L    ++ +FNP+DSYIWFEL GSPSD
Sbjct: 112 GDSIGNPELMRKRVEERVRKKGRDFRKSKTGSVLAYKVSFRDFNPVDSYIWFELYGSPSD 171

Query: 136 RDVDLIGS--------------------LANSSMEYNPIYDADKGFKVMQSSFHDISDVE 195
           RDVDLIGS                    LANSSMEYNP+YDADKGFK+M SSFHDI DVE
Sbjct: 172 RDVDLIGSVIQSWYVMGRLGAFNSSNLQLANSSMEYNPLYDADKGFKLMPSSFHDIGDVE 231

Query: 196 FQDNWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTSPEYG 232
           FQDNWGRVWVDLGTSD+FAIDVLLNCLTVLSSEYLGIQQVVFGGR MGDWEEGMTSPEYG
Sbjct: 232 FQDNWGRVWVDLGTSDFFAIDVLLNCLTVLSSEYLGIQQVVFGGRNMGDWEEGMTSPEYG 291

[Close]
BLAST of Cla022886 vs. NCBI nr
Match: gi|225463813|ref|XP_002271050.1| (PREDICTED: uncharacterized protein LOC100262808 [Vitis vinifera])

HSP 1 Score: 66.6 bits (161), Expect = 6.4e-08
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 1 

Query: 73  KSSGTSARSRRLLKLREEKRKREHDRLHNYPAWA 107
           K SGT+AR RRLLKLREEKRKRE+DRLHNYPAWA
Sbjct: 61  KGSGTTARGRRLLKLREEKRKREYDRLHNYPAWA 94


HSP 2 Score: 241.5 bits (615), Expect = 1.4e-60
Identity = 125/186 (67.20%), Postives = 137/186 (73.66%), Query Frame = 1 

Query: 76  GTSARSRRLLKLREEKRKREHDR----------LHNYPAWANFNPLDSYIWFELIGSPSD 135
           G S  +  L++ R E+R R+  R          L    ++ +FNP+DSYIWFEL GSPSD
Sbjct: 143 GDSIGNPELMRKRVEERVRKKGRDFRKSKTGSVLAYKVSFRDFNPVDSYIWFELYGSPSD 202

Query: 136 RDVDLIGS--------------------LANSSMEYNPIYDADKGFKVMQSSFHDISDVE 195
           RDVDLIGS                    LANSSMEYNP+YDADKGFK+M SSFHDI DVE
Sbjct: 203 RDVDLIGSVIQSWYVMGRLGAFNSSNLQLANSSMEYNPLYDADKGFKLMPSSFHDIGDVE 262

Query: 196 FQDNWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTSPEYG 232
           FQDNWGRVWVDLGTSD+FAIDVLLNCLTVLSSEYLGIQQVVFGGR MGDWEEGMTSPEYG
Sbjct: 263 FQDNWGRVWVDLGTSDFFAIDVLLNCLTVLSSEYLGIQQVVFGGRNMGDWEEGMTSPEYG 322

[Close]
BLAST of Cla022886 vs. NCBI nr
Match: gi|297742705|emb|CBI35339.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 66.6 bits (161), Expect = 6.4e-08
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 1 

Query: 73  KSSGTSARSRRLLKLREEKRKREHDRLHNYPAWA 107
           K SGT+AR RRLLKLREEKRKRE+DRLHNYPAWA
Sbjct: 92  KGSGTTARGRRLLKLREEKRKREYDRLHNYPAWA 125


HSP 2 Score: 239.6 bits (610), Expect = 5.5e-60
Identity = 124/186 (66.67%), Postives = 136/186 (73.12%), Query Frame = 1 

Query: 76  GTSARSRRLLKLREEKRKREHDR----------LHNYPAWANFNPLDSYIWFELIGSPSD 135
           G S  +  L++ R E R R+  R          L     + +FNPLDSYIWFEL G PSD
Sbjct: 105 GDSIGNPELMRKRVEDRVRKKGRDFQKSKTGSVLAYKVTFRDFNPLDSYIWFELFGPPSD 164

Query: 136 RDVDLIGS--------------------LANSSMEYNPIYDADKGFKVMQSSFHDISDVE 195
           RDV+LIG+                    LANSSMEY+P+YDADKGFKVM SSFHDISD+E
Sbjct: 165 RDVNLIGNVIQSWYVMGRLGAFNSSNLQLANSSMEYDPLYDADKGFKVMPSSFHDISDIE 224

Query: 196 FQDNWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTSPEYG 232
           FQDNWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMT+PEYG
Sbjct: 225 FQDNWGRVWVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTNPEYG 284

The following BLAST results are available for this feature:
BLAST of Cla022886 vs. TrEMBL
Match NameE-valueIdentityDescription
F6HVX8_VITVI1.0e-6067.20Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0071g01140 PE=4 SV=... [more]
F6HVX8_VITVI4.5e-0888.24Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0071g01140 PE=4 SV=... [more]
A0A151RI45_CAJCA1.4e-0660.87Uncharacterized protein OS=Cajanus cajan GN=KK1_036360 PE=4 SV=1[more]
V4UC78_9ROSI3.1e-0945.36Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015943mg PE=4 SV=1[more]
A0A0B2SCW4_GLYSO9.9e-0842.31Uncharacterized protein OS=Glycine soja GN=glysoja_021604 PE=4 SV=1[more]
BLAST of Cla022886 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449458716|ref|XP_004147093.1|1.9e-6851.29PREDICTED: uncharacterized protein LOC101211689 [Cucumis sativus][more]
gi|659090247|ref|XP_008445913.1|7.2e-6851.61PREDICTED: uncharacterized protein LOC103488796 [Cucumis melo][more]
gi|225463813|ref|XP_002271050.1|1.4e-6067.20PREDICTED: uncharacterized protein LOC100262808 [Vitis vinifera][more]
gi|225463813|ref|XP_002271050.1|6.4e-0888.24PREDICTED: uncharacterized protein LOC100262808 [Vitis vinifera][more]
gi|297742705|emb|CBI35339.3|6.4e-0888.24unnamed protein product [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021920DUF3531
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010207 photosystem II assembly
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla022886Cla022886.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021920Protein of unknown function DUF3531PFAMPF12049DUF3531coord: 139..220
score: 4.1
NoneNo IPR availablePANTHERPTHR33102FAMILY NOT NAMEDcoord: 107..231
score: 5.5
NoneNo IPR availablePANTHERPTHR33102:SF13DVL17coord: 107..231
score: 5.5