Lsi04G000030 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCGTGTTCAAGGGTGTCGGATTAGGTTTAACTTTTACGAATGCCAATTTCAGTTGCTATTTTCCTTCTAATACAAGAATCTTCCCCCAATCTGTCACTTCAAACCCTGAATTTCATCCAATTTCTCTTCGTTCTCGTACATTGCTTTTTGAAAATGGCAACGATTCTAAGTTTGACACCAAGAGCACTTCTACACCGACTACGACTGATGCTAAGAGCTCTGGAACCTCTGCTAGAAGTCGTCGATTGCTAAAGCTTCGTGAAGAGAAGCGCAAACGAGAACATGATCGTCTCCACAATTACCCTGCCTGGGCGAAGTCTCTCTCTCTCTGTTCTTTCTGTATGATTGTGTGTTTCGTTTTTCTTTTTTTCACTGTGTTTGATTGCTAATGAAATCGCCGGGGAAACTACAGAGTGTTAGAAGATGCCTGCAAAAACGATGCGGAATTACGACTGTTCTTTGTGATAGCATTGGCAATCCAGAGGAAATGA ATGTCCGTGTTCAAGGGTGTCGGATTAGGTTTAACTTTTACGAATGCCAATTTCAGTTGCTATTTTCCTTCTAATACAAGAATCTTCCCCCAATCTGTCACTTCAAACCCTGAATTTCATCCAATTTCTCTTCGTTCTCGTACATTGCTTTTTGAAAATGGCAACGATTCTAAGTTTGACACCAAGAGCACTTCTACACCGACTACGACTGATGCTAAGAGCTCTGGAACCTCTGCTAGAAGTCGTCGATTGCTAAAGCTTCGTGAAGAGAAGCGCAAACGAGAACATGATCGTCTCCACAATTACCCTGCCTGGGCGAAAGTGTTAGAAGATGCCTGCAAAAACGATGCGGAATTACGACTGTTCTTTGTGATAGCATTGGCAATCCAGAGGAAATGA ATGTCCGTGTTCAAGGGTGTCGGATTAGGTTTAACTTTTACGAATGCCAATTTCAGTTGCTATTTTCCTTCTAATACAAGAATCTTCCCCCAATCTGTCACTTCAAACCCTGAATTTCATCCAATTTCTCTTCGTTCTCGTACATTGCTTTTTGAAAATGGCAACGATTCTAAGTTTGACACCAAGAGCACTTCTACACCGACTACGACTGATGCTAAGAGCTCTGGAACCTCTGCTAGAAGTCGTCGATTGCTAAAGCTTCGTGAAGAGAAGCGCAAACGAGAACATGATCGTCTCCACAATTACCCTGCCTGGGCGAAAGTGTTAGAAGATGCCTGCAAAAACGATGCGGAATTACGACTGTTCTTTGTGATAGCATTGGCAATCCAGAGGAAATGA MSVFKGVGLGLTFTNANFSCYFPSNTRIFPQSVTSNPEFHPISLRSRTLLFENGNDSKFDTKSTSTPTTTDAKSSGTSARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAELRLFFVIALAIQRK
BLAST of Lsi04G000030 vs. TrEMBL
Match: M5XDF4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008904mg PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 3.7e-15 Identity = 52/91 (57.14%), Postives = 60/91 (65.93%), Query Frame = 1
BLAST of Lsi04G000030 vs. TrEMBL
Match: A0A078HVE6_BRANA (BnaAnng06110D protein OS=Brassica napus GN=BnaAnng06110D PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 3.7e-15 Identity = 52/102 (50.98%), Postives = 65/102 (63.73%), Query Frame = 1
BLAST of Lsi04G000030 vs. TrEMBL
Match: A0A068V8Y6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00018256001 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 4.8e-15 Identity = 42/49 (85.71%), Postives = 47/49 (95.92%), Query Frame = 1
BLAST of Lsi04G000030 vs. TrEMBL
Match: V4UC78_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015943mg PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 8.2e-15 Identity = 42/49 (85.71%), Postives = 46/49 (93.88%), Query Frame = 1
BLAST of Lsi04G000030 vs. TrEMBL
Match: A0A067GBT3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018584mg PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.8e-14 Identity = 54/117 (46.15%), Postives = 66/117 (56.41%), Query Frame = 1
BLAST of Lsi04G000030 vs. TAIR10
Match: AT5G08400.1 (AT5G08400.1 Protein of unknown function (DUF3531)) HSP 1 Score: 59.7 bits (143), Expect = 1.6e-09 Identity = 46/135 (34.07%), Postives = 59/135 (43.70%), Query Frame = 1
BLAST of Lsi04G000030 vs. NCBI nr
Match: gi|449458716|ref|XP_004147093.1| (PREDICTED: uncharacterized protein LOC101211689 [Cucumis sativus]) HSP 1 Score: 194.1 bits (492), Expect = 1.5e-46 Identity = 102/121 (84.30%), Postives = 106/121 (87.60%), Query Frame = 1
BLAST of Lsi04G000030 vs. NCBI nr
Match: gi|659090247|ref|XP_008445913.1| (PREDICTED: uncharacterized protein LOC103488796 [Cucumis melo]) HSP 1 Score: 193.0 bits (489), Expect = 3.4e-46 Identity = 102/121 (84.30%), Postives = 105/121 (86.78%), Query Frame = 1
BLAST of Lsi04G000030 vs. NCBI nr
Match: gi|645228686|ref|XP_008221113.1| (PREDICTED: uncharacterized protein LOC103321126 [Prunus mume]) HSP 1 Score: 90.1 bits (222), Expect = 3.1e-15 Identity = 52/91 (57.14%), Postives = 60/91 (65.93%), Query Frame = 1
BLAST of Lsi04G000030 vs. NCBI nr
Match: gi|596163148|ref|XP_007222953.1| (hypothetical protein PRUPE_ppa008904mg [Prunus persica]) HSP 1 Score: 89.4 bits (220), Expect = 5.3e-15 Identity = 52/91 (57.14%), Postives = 60/91 (65.93%), Query Frame = 1
BLAST of Lsi04G000030 vs. NCBI nr
Match: gi|674892015|emb|CDY40748.1| (BnaAnng06110D [Brassica napus]) HSP 1 Score: 89.4 bits (220), Expect = 5.3e-15 Identity = 52/102 (50.98%), Postives = 65/102 (63.73%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |