CmoCh15G003960 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G003960
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionBnaC04g25510D protein
LocationCmo_Chr15 : 1821886 .. 1827515 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCAGCAGAAACAACAGAGCCCATCACCACAAGGGAGAAGAAAGAAGAACAAGACATGGAGGAAACAGAGACAAAGAAGAACAACAAGAAGAACACCAAGAAGCAAAAACATCAACACCCAAATGACCAAACCACAAAATCACCCTCTGATTTCTCTTTCAAGCCAAGCTCTCATGTAAAGGGTCTCAGATTCGGTGGCCAATTCATCGTTAAATCCTTCACAATCCGGCGAGCTAGGCCTTTAGAGTTTCTCCAGCTCCTCTCTTTTCCGGCCACCACCAGAAATTCCGGCCATAAACCGCCGTTCCCATCTGCCACAGCTTTCATTCCCACAAACTTCACAATCCTCGCTCACCATGCGTGGCACACACTCACTCTAGGCCTCGGCACAAAGAAGTCCAAAGTTCTTCTCTTTGTGTTTGAAAATGAGGCCATGAAGGCAGCAATAGACCGTGTTTGGGCAGCAGAAATCCCTCTAGGCGAAGTGAATAAGAAGATGATTAGAGGGCTAAGTGGGTGTGAGATGGCTCGGTTCAAATTCAGAAAAGGGTGCATAACTTTTTATGTTTATGCAGTTCGAAGAGAAGGGTGTTTTGGGTTTGCTTGTGCTGATGATTTGAGAACCATTTTGGAGTCTGTTGTGGCTCTCAAAGATTTCTTGGATCACACTGCTATGCTTGCTATGCCTAACCAGAAAACCATCAGCTTTGCGGCGCCTCCTGTTGCAATGGCTTATTAGCCTCTCCTCTAATCATATTGATATTCATTTTCCTCCATTCTCATATCATCAATCTTAGCCAAGCAGAAGGGATTCGTTGGTAATTGGTTTATTTGTTCAAACTTTTCTCTTCTTCGTTGTGATTGTATACACGGTTTGTTTTCTGAAACTTGAAATGGAAGAGCATCCGCTCTTCAACAACATAGAAATCTCTAGTACTTGCTAATAAATTATGATGATTTTGCATCTACAGGCCACAAAATCCCTGCCCTTTTCCCCATTTTACTCGCTTTCATAATCTTTATCTCCAAATTTTGTTATTCTTCAGGCAATCGGATGATCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCTTCAGTTCATCTTCTTTAGTAGATCCTTAAAGATCTCGACTTAGCTATGAATTGCATTGCATGACAGAAGATTAACTGAGTGATTCCAATTCCAGAAGGTGCTAAAAATGGAATCCACAAAGTCCCAGAACATGAACAACAGTGTTTTTCCATTCAATGAACTGTTGAATCCCCAATTGATTCACTCAAACGACAAAAAAAGACCAATCCATTTCATAGTTCAGACAGAAACCATTAATGTAATTCGGAAAATTCAACAAATTTTCTCATTTCCTACTTTTTTTTTTCTGTGTGGCATTACATCAAACACTTTGATGCATGTGAGCGGCGGTACAATTAAAACAGTGAGGTCAAAACCCTGCGCCACTACCATGACTTTGTTGCGGTCTAAGCAAATAAAGAGAAGGAAAAAAGAAAGAAGACTTAGCTTTTTCTGATTCCCCGAACTCCATGGCATCAATCATGTCGAGAGAGAGGGCCCCTTTTCAGTGAGTTATATCGCACCACGAGTCATCATGATCAAGTACACCACCACTTGAATGAAATGGAAGCCTTCATGTGCTTGATTACGCTTCTATGCAGGCATTTTTTTCCAAAGGGTTTCATGATTTTCCTTCAAAATGAAGAATTTTCAGTGAATCACAGTTTGTCGTATTGATTTGTCAGCTTCAACTTGCTCAATTTTTTCTCTTTTTGGGTTTGTGGAGTTGAAACTTGAAAGAGATGAGGAGACGCCATTATTTGGAAATGAGAAATTGTTAGGACCATCAATTTTTTAAATAAACTAAACCCTAATTTCAAAAGTCATTAAAGCATTTTAAAAAAATTAAGAAAATCACCCAAATACAACCGCCCACCATGGGGTTCGAACCCATGACCACAAGGTTAGCTAGACGGGCTTCTATTTTTGAACGAAAAAAGAACAAAAATCGTAGGACAAATCGCCTCAATCCATATGAATGTGCAAAATCTTAGTACACATTCTCACCCACCATGGGGCTCGAACCCATGACTACAAGGTTAAGAGCCTTGTGCTCCACCAACTAAGCTAGACGGGCTTCTATTTTTACTCGAAAAAAGAACAAAAATCGTAGGACAAATCGCCTAGCTCAATCCACAATAGGAGCAAAATTTGGCTTGTGGTCTACAATTTATGAACGTGCATACTAAAAATCTTAGTAGACATTTTCACCCACCATGGGGTTCGAACCTATGACCACAAGGTTAAGAGCCTTGCGCTCTAACAACTAAGCTAGATGGGCTACAAATGACCTAACTCAATCCACAATAAAAGCAAAATTTGGCTTGTGGTCTTACCATTTATGAATGTGCCTACTAAAAATCTCAGAACACATTCTCGCCCACCATGGGGCTCGAACCCATGACCACAAGGTTAAGAGCCTTGCGCTCTACCAACTGAGCTAGACGGGCTTCTATTTTTGAACGAAAAAAGAACAAATCGCCTAGCTCAATCTACAAACCATTTATGAACGTGCAAAATCTCAGTACACATTCTCGCCCACCATGGGGCTCAAACCCATAACCATAAGGTTAAGAGCCTTGTGCTCTACCAACTGAGCTAGACAGACTTCTATTTTTAGATGAAAAAAGAAGAAAAATCGTACACAAATAGTCTAATTCAATAAGAATAAAATTTGGCTTTGTGAATCAATCCAAAATGCATTCGCCCACCGTGGGGCTCGAACCCACGACCACAAGGTTAAGAGCCTTGCGCTCTACCAACTGAGCTAGACGGGCTTCTTGTCCTAATAATTTAAGTTTAATAATTTCTATCAATTTCATCTGCCGACCTCTCCCTGCTCCAGCTGCAATTTAAGGTACAAAATGGAGTATCCATGACGACACTGTTCATTTTGATTAGCCCCACTCTTTGTCTTGCAGCAGGTTTGATATCTTCTATCATCATCGAAGCTCAAAAGGAGGAGATTCAATCATGAGTACGTTACTGCATCATTCTTCATTTATTTGAAATACAATTTAATTTCTCAAATTATCATATATCTGCCTACATGAGGTTTTCGTTCTTCTCATCCGTTTTTTAATTTCTCAAACTCGTTGAAACCGGTAACTTCGATCATATATATGTATTAGTTAGCTTCGATTGAATGTTTTATGTGTGAGACGCCACGATTGAGCGCCATTCAGATTATATTTTCGTTGAAGAAGTTGGATTTATAGGCAGGTAGAGGTTTAGTCAAACAATCTAGAATTTGATCGTAGGATTGTATGTACCTTATAGCTTAACAAAAGAGGAAGAGAGTGCTCAATTTGCACTACGATAGGGTTAAGAATATGCAGTAGGTGGTAAGGAGAGATTGGGGATCTTGTTCCTTATTTGTTAAATGCTGTTTGAGGGTTCCCACGGTAATCGTAAAATCCTTTTCCAAGCCTTTCTGAAGTCTATTGAAGACTTGTGTTGCAACCTCAAATCAAAATAAGTACTTGTACAACCAGCCAAAAAGAAGTAGATCAATAGAAAACTCACTCATACTAAGAATTGAGGTTCCTTTCAGCAGTTAGTAGTGTGTATTTGGTTGCTGGATTTTGATTGGATTTCTGCCACAGGATGTTCTGTTGTTGATTTTAGTAGCTCCATCATTTATGGGAGTTGAGTAATCTCATTTTTTGTAGGCCTTTGGAAGGCTCTAAAACTCAAAAGATAACAAGGGAAGGGAAAATTCTTAAATGTTGTTCGTTGAATTATTCTGACAGAGTACAATTATGTAGGCATGAATTCTCACAATTTTCCAGTTCTAACAGTTAGTTATCTAAGCAATCTCAACTAAATCCAAAGAGGATAAAGGCTTGGTTAGGATGTTGCAATCTGGGTTGAGGGAGGCAGAGGTTGAACACTGTAATAGTTCTTGCCAAGAACTAATCACAGACAAAGCAAGTGTTGGATCCCGCATCAGTTGGGTTGGGATGAGAACCGAAACATTAAGGTGTGGAAACCTCTCCCTATCAATGTTGGGGATGAGAATGAAGCCTTCTTTAAGGGTGTGGAAACCTAGTAGGATGCATGAAGCAAGTTTCTTGAATCAACTGTTGATTTTTCTTTAACTATTTTTCTAATTTAATGTATAATCTCGTTTTCCCAGAGCAAAAGCTTCTTAGATTACATCTCCCAAAAGCTCTTCAAGATCCCCTTTGGTTATATTTGATTAATTAACATGTTCTTCTTCCTTGAAGGTCAAATATTCAAATCCAGATGTAAAAATTGAGGTAAGAAAGTCATTGAAACGGTACAAGTAAAAATTAACATCTTCCTCTTCCTGGAATGGCAGTTTGAAGTACACAAGTTTTGGGTCTTAAATTATGATTACGAGAACAATTATGGTAAGCAAAATAAATATTAATAAAAGAAGGGTATAGTCGTGGCAACCAACTCAAATACCTTCTTGAAATCAATTATTTCAATACTAAAACAATAAAGCTAGAACAAAAAGGACTACAAGTACTCCCATGTCTTCTTAACCGTCTGTTTCTTTGTCATTTTAGAAGCATTTTCTGTGGACAATCGATGGCCCAGATTCGTCGTACTCTGCCTTTGCAATCCACATCTGCACCAAAACAAACAAGACAGCGATTAAGTATTATAAATAAGGGAACAACTGAAAGCATTTTGTGAAAGGCATTTTGTGAATGAATAATAGCAACCTGCTGGAAGGTACTCAGAGAAGCCAAGATGGAACCACCGATCCAGACACTGTATTTTCTCTCTGGAGGTGCCACCACCTTGATCTTCATGCTGCTTGGAGCCAATGCAGAGATTTCCTTGCTCATTCTATCGGCGATGCCCGTAAACATGGTCGAACCACCGGAGAGGACAATGTTGCCATACAGATCCTTCCTGATATCTACGTCGCACTTCATGATAGAATTATATGTGGTCTCATGAATACCTGCAGCTTCCATTCCGATCATGGATGGCTGGAAAAGAACTTCCGGGCATCTAAAACGTTCGGCGCCGATTGTGATGACTTGTCCATCAGGCAACTCATAGCTCTTTTCAACTGA

mRNA sequence

ATGGAAGCAGCAGAAACAACAGAGCCCATCACCACAAGGGAGAAGAAAGAAGAACAAGACATGGAGGAAACAGAGACAAAGAAGAACAACAAGAAGAACACCAAGAAGCAAAAACATCAACACCCAAATGACCAAACCACAAAATCACCCTCTGATTTCTCTTTCAAGCCAAGCTCTCATGTAAAGGGTCTCAGATTCGGTGGCCAATTCATCGTTAAATCCTTCACAATCCGGCGAGCTAGGCCTTTAGAGTTTCTCCAGCTCCTCTCTTTTCCGGCCACCACCAGAAATTCCGGCCATAAACCGCCGTTCCCATCTGCCACAGCTTTCATTCCCACAAACTTCACAATCCTCGCTCACCATGCGTGGCACACACTCACTCTAGGCCTCGGCACAAAGAAGTCCAAAGTTCTTCTCTTTGTGTTTGAAAATGAGGCCATGAAGGCAGCAATAGACCGTGTTTGGGCAGCAGAAATCCCTCTAGGCGAAGTGAATAAGAAGATGATTAGAGGGCTAAGTGGGTGTGAGATGGCTCGGTTCAAATTCAGAAAAGGGTGCATAACTTTTTATGTTTATGCAGTTCGAAGAGAAGGGTGTTTTGGGTTTGCTTGTGCTGATGATTTGAGAACCATTTTGGAGTCTGTTGTGGCTCTCAAAGATTTCTTGGATCACACTGCTATGCTTGCTATGCCTAACCAGAAAACCATCAGCTTTGCGGCGCCTCCTGTCAAATATTCAAATCCAGATGTAAAAATTGAGAAGCATTTTCTGTGGACAATCGATGGCCCAGATTCGTCGTACTCTGCCTTTGCAATCCACATCTGCACCAAAACAAACAAGACAGCGATTAACAACCTGCTGGAAGGTACTCAGAGAAGCCAAGATGGAACCACCGATCCAGACACTGTATTTTCTCTCTGGAGGTGCCACCACCTTGATCTTCATGCTGCTTGGAGCCAATGCAGAGATTTCCTTGCTCATTCTATCGGCGATGCCCGTAAACATGGTCGAACCACCGGAGAGGACAATGTTGCCATACAGATCCTTCCTGATATCTACGTCGCACTTCATGATAGAATTATATGTGGTCTCATGAATACCTGCAGCTTCCATTCCGATCATGGATGGCTGGAAAAGAACTTCCGGGCATCTAAAACGTTCGGCGCCGATTGTGATGACTTGTCCATCAGGCAACTCATAGCTCTTTTCAACTGA

Coding sequence (CDS)

ATGGAAGCAGCAGAAACAACAGAGCCCATCACCACAAGGGAGAAGAAAGAAGAACAAGACATGGAGGAAACAGAGACAAAGAAGAACAACAAGAAGAACACCAAGAAGCAAAAACATCAACACCCAAATGACCAAACCACAAAATCACCCTCTGATTTCTCTTTCAAGCCAAGCTCTCATGTAAAGGGTCTCAGATTCGGTGGCCAATTCATCGTTAAATCCTTCACAATCCGGCGAGCTAGGCCTTTAGAGTTTCTCCAGCTCCTCTCTTTTCCGGCCACCACCAGAAATTCCGGCCATAAACCGCCGTTCCCATCTGCCACAGCTTTCATTCCCACAAACTTCACAATCCTCGCTCACCATGCGTGGCACACACTCACTCTAGGCCTCGGCACAAAGAAGTCCAAAGTTCTTCTCTTTGTGTTTGAAAATGAGGCCATGAAGGCAGCAATAGACCGTGTTTGGGCAGCAGAAATCCCTCTAGGCGAAGTGAATAAGAAGATGATTAGAGGGCTAAGTGGGTGTGAGATGGCTCGGTTCAAATTCAGAAAAGGGTGCATAACTTTTTATGTTTATGCAGTTCGAAGAGAAGGGTGTTTTGGGTTTGCTTGTGCTGATGATTTGAGAACCATTTTGGAGTCTGTTGTGGCTCTCAAAGATTTCTTGGATCACACTGCTATGCTTGCTATGCCTAACCAGAAAACCATCAGCTTTGCGGCGCCTCCTGTCAAATATTCAAATCCAGATGTAAAAATTGAGAAGCATTTTCTGTGGACAATCGATGGCCCAGATTCGTCGTACTCTGCCTTTGCAATCCACATCTGCACCAAAACAAACAAGACAGCGATTAACAACCTGCTGGAAGGTACTCAGAGAAGCCAAGATGGAACCACCGATCCAGACACTGTATTTTCTCTCTGGAGGTGCCACCACCTTGATCTTCATGCTGCTTGGAGCCAATGCAGAGATTTCCTTGCTCATTCTATCGGCGATGCCCGTAAACATGGTCGAACCACCGGAGAGGACAATGTTGCCATACAGATCCTTCCTGATATCTACGTCGCACTTCATGATAGAATTATATGTGGTCTCATGAATACCTGCAGCTTCCATTCCGATCATGGATGGCTGGAAAAGAACTTCCGGGCATCTAAAACGTTCGGCGCCGATTGTGATGACTTGTCCATCAGGCAACTCATAGCTCTTTTCAACTGA
Homology
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BLAST of CmoCh15G003960 vs. TrEMBL
Match: A0A0A0KNW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517120 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 1.1e-115
Identity = 221/247 (89.47%), Postives = 230/247 (93.12%), Query Frame = 1 

Query: 1   MEAAETTEPITTREKKE----EQDMEETETKKNNKKNTKKQKHQHPNDQTTKSPSDFSFK 60
           ME+ ETT+PITT+EKKE    EQ+MEETETKK+ KKN KKQKHQHPNDQTTKS  DFSFK
Sbjct: 1   MESTETTKPITTKEKKEVHIEEQEMEETETKKS-KKNNKKQKHQHPNDQTTKS--DFSFK 60

Query: 61  PSSHVKGLRFGGQFIVKSFTIRRARPLEFLQLLSFPATTRNSGHKPPFPSATAFIPTNFT 120
           P S VKGLRFGGQFIVKSFTIRRARPLE L+LLSFPATTRNSGHKPPFPSATAFIPTNFT
Sbjct: 61  PCSDVKGLRFGGQFIVKSFTIRRARPLELLRLLSFPATTRNSGHKPPFPSATAFIPTNFT 120

Query: 121 ILAHHAWHTLTLGLGTKKSKVLLFVFENEAMKAAIDRVWAAEIPLGEVNKKMIRGLSGCE 180
           ILAHHAWHTLTLGLGT+KSKVLLFVFENE MKAAIDRVW  EIPLGEVNKKMIRGLSGCE
Sbjct: 121 ILAHHAWHTLTLGLGTRKSKVLLFVFENETMKAAIDRVWPTEIPLGEVNKKMIRGLSGCE 180

Query: 181 MARFKFRKGCITFYVYAVRREGCFGFACADDLRTILESVVALKDFLDHTAMLAMPNQKTI 240
           MARFKFRKGCITFYVYAVRREGCFGF+C DDLRTILESVVALKDFLDHTAMLAMPNQ+TI
Sbjct: 181 MARFKFRKGCITFYVYAVRREGCFGFSCTDDLRTILESVVALKDFLDHTAMLAMPNQRTI 240

Query: 241 SFAAPPV 244
           SFA PPV
Sbjct: 241 SFAVPPV 244

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BLAST of CmoCh15G003960 vs. TrEMBL
Match: A0A061FNF3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_042769 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 1.9e-94
Identity = 173/215 (80.47%), Postives = 192/215 (89.30%), Query Frame = 1 

Query: 27  KKNNKKNTKKQKHQHPNDQTTKSPSDFSFKPSSHVKGLRFGGQFIVKSFTIRRARPLEFL 86
           +K   K  KKQKHQHPNDQTTK  SDFSFKPSS VKGLRFGGQFIVKSFTIRRARPLE L
Sbjct: 3   EKEKNKKNKKQKHQHPNDQTTKPASDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLELL 62

Query: 87  QLLSFPATTRNSGHKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFENEA 146
           +LL FP  ++++ +K PFPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKVLLFVFE+EA
Sbjct: 63  KLLDFPPISKSNSNKLPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFESEA 122

Query: 147 MKAAIDRVWAAEIPLGEVNKKMIRGLSGCEMARFKFRKGCITFYVYAVRREGCFGFACAD 206
           MK A+DR+W  EIPLGEVNKK+IRGL+GCEMARFKFRKGCITFYVYAVR+ G  GF+CAD
Sbjct: 123 MKLAVDRIWPPEIPLGEVNKKLIRGLTGCEMARFKFRKGCITFYVYAVRKVGNMGFSCAD 182

Query: 207 DLRTILESVVALKDFLDHTAMLAMPNQKTISFAAP 242
           DLRTIL+SVVALKDFLDHTAMLAMPNQ++IS+  P
Sbjct: 183 DLRTILQSVVALKDFLDHTAMLAMPNQRSISYCPP 217

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BLAST of CmoCh15G003960 vs. TrEMBL
Match: B9HMH8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s05590g PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 3.5e-93
Identity = 172/217 (79.26%), Postives = 195/217 (89.86%), Query Frame = 1 

Query: 28  KNNKKNTKKQKHQHPNDQTTKSPSDFSFKPSSHVKGLRFGGQFIVKSFTIRRARPLEFLQ 87
           K  KK+ KKQKHQHPNDQTTK  SDFSFKPSS VKGLRFGGQFIVKSFTIRRARPLE L+
Sbjct: 4   KEKKKHHKKQKHQHPNDQTTKPSSDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLELLK 63

Query: 88  LLSFPATTRNS-GHKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFENEA 147
           +LS+P T +NS  +K PFPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKVLLFVFE+E+
Sbjct: 64  VLSYPPTNKNSDNNKTPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFESES 123

Query: 148 MKAAIDRVWAAEIPLGEVNKKMIRGLSGCEMARFKFRKGCITFYVYAVRREGCFGFACAD 207
           M+ A+DR+W  EIPLGEVNKK+IRGL+GCEMARFKFRKGCITFYVYAVRR G  GF+CAD
Sbjct: 124 MRLAVDRIWPPEIPLGEVNKKLIRGLNGCEMARFKFRKGCITFYVYAVRRVGNMGFSCAD 183

Query: 208 DLRTILESVVALKDFLDHTAMLAMPNQKTISFAAPPV 244
           DL+ IL+SVVAL DFLDHTAMLAMP+Q++I++A+P V
Sbjct: 184 DLKIILQSVVALNDFLDHTAMLAMPHQRSINYASPQV 220

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BLAST of CmoCh15G003960 vs. TrEMBL
Match: B9HTI8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s21140g PE=4 SV=2)

HSP 1 Score: 347.4 bits (890), Expect = 2.3e-92
Identity = 174/224 (77.68%), Postives = 198/224 (88.39%), Query Frame = 1 

Query: 21  MEETETKKNNKKNTKKQKHQHPNDQTTKSPSDFSFKPSSHVKGLRFGGQFIVKSFTIRRA 80
           MEE E KK+NKK    QKHQHPN QT+K  SDFSFKPSS VKGLRFGGQFIVKSFTIRRA
Sbjct: 1   MEEKEKKKHNKK----QKHQHPNQQTSKPSSDFSFKPSSEVKGLRFGGQFIVKSFTIRRA 60

Query: 81  RPLEFLQLLSFPATTRNSGH-KPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVLL 140
           RPLE L++LS+PAT +NS + K  FPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKVLL
Sbjct: 61  RPLELLKVLSYPATNKNSNNSKAAFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLL 120

Query: 141 FVFENEAMKAAIDRVWAAEIPLGEVNKKMIRGLSGCEMARFKFRKGCITFYVYAVRREGC 200
           FVFE+E+MK A+DR+W  EIPLGEVNKK+IRGL+GCEMARFKFRKGC+TFYVYAVRR G 
Sbjct: 121 FVFESESMKLAVDRIWPPEIPLGEVNKKLIRGLNGCEMARFKFRKGCVTFYVYAVRRVGN 180

Query: 201 FGFACADDLRTILESVVALKDFLDHTAMLAMPNQKTISFAAPPV 244
            GF+CADDL+ IL+SVVAL DFLDHTAMLAMP+Q++I++A+P V
Sbjct: 181 LGFSCADDLKMILQSVVALNDFLDHTAMLAMPHQRSINYASPQV 220

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BLAST of CmoCh15G003960 vs. TrEMBL
Match: M5XKJ1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010997mg PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 5.6e-91
Identity = 178/221 (80.54%), Postives = 195/221 (88.24%), Query Frame = 1 

Query: 21  MEETETKKNNKKNTKKQKHQHPNDQTTKSPS-DFSFKPSSHVKGLRFGGQFIVKSFTIRR 80
           M E E K +NK   KKQKHQHPNDQTTK+ S DFSFKPSS VKGLRFGGQFIVKSFTIRR
Sbjct: 1   MGEKEKKTSNKN--KKQKHQHPNDQTTKTASSDFSFKPSSEVKGLRFGGQFIVKSFTIRR 60

Query: 81  ARPLEFLQLLSFPATTR-NSGHKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVL 140
           ARPLE LQLLS P   + NS +K PFPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKV+
Sbjct: 61  ARPLELLQLLSLPPPNKPNSNNKLPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVV 120

Query: 141 LFVFENEAMKAAIDRVWAAEIPLGEVNKKMIRGLSGCEMARFKFRKGCITFYVYAVRREG 200
           LFVFE EAMKAA+DRVW  EIPLGEVNK++IRGL+GCE+ARFKFRKGCITFYVYAVR+ G
Sbjct: 121 LFVFETEAMKAAVDRVWPPEIPLGEVNKRLIRGLNGCEIARFKFRKGCITFYVYAVRQVG 180

Query: 201 CFGFACADDLRTILESVVALKDFLDHTAMLAMPNQKTISFA 240
             GF+ ADDLRTIL+SVVAL+DFLDHTAMLAMPNQ+TIS+A
Sbjct: 181 SLGFSSADDLRTILQSVVALQDFLDHTAMLAMPNQRTISYA 219

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BLAST of CmoCh15G003960 vs. TAIR10
Match: AT3G55420.1 (AT3G55420.1 unknown protein)

HSP 1 Score: 267.7 bits (683), Expect = 1.2e-71
Identity = 144/222 (64.86%), Postives = 167/222 (75.23%), Query Frame = 1 

Query: 25  ETKKNNKKNTKKQKHQHPNDQTTKSPSDFSFKPSSHVKGLRFGGQFIVKSFTIRRARPLE 84
           E +K  KK  KK+KHQ          SD SFKPSS VKGL+FGGQ IVKSFTIRRAR  E
Sbjct: 3   EKEKKTKKKKKKEKHQS---------SDISFKPSSDVKGLKFGGQIIVKSFTIRRARTFE 62

Query: 85  FLQLLSFPATTRNSGHKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFEN 144
            L+LLS P     S   PP  S  A++PTNFTILAHHAWHTLTLGLGT+KSKV++FVFE 
Sbjct: 63  LLKLLSLP-----SSSSPPLLSTAAYLPTNFTILAHHAWHTLTLGLGTRKSKVVVFVFET 122

Query: 145 EAMK----AAIDRVWAAEIPLGEVNKKMIRGLSGCEMARFKFRKGCITFYVYAVRREGCF 204
           EAMK    AA   +W +EIPLG+VNKKMIR L   EMARFKFRKGCITFYVYAVR  G  
Sbjct: 123 EAMKSSVVAAEGGIWPSEIPLGDVNKKMIRKLKNWEMARFKFRKGCITFYVYAVRNAGNE 182

Query: 205 GFACADDLRTILESVVALKDFLDHTAMLAMPNQKTISFAAPP 243
           GFA A+DL+ IL++VVALKDF+DHTAML MP+QK+I++++ P
Sbjct: 183 GFAAAEDLKVILQAVVALKDFMDHTAMLVMPHQKSINYSSCP 210

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BLAST of CmoCh15G003960 vs. NCBI nr
Match: gi|659117960|ref|XP_008458876.1| (PREDICTED: uncharacterized protein LOC103498150 [Cucumis melo])

HSP 1 Score: 432.2 bits (1110), Expect = 1.0e-117
Identity = 223/247 (90.28%), Postives = 231/247 (93.52%), Query Frame = 1 

Query: 1   MEAAETTEPITTREKKE----EQDMEETETKKNNKKNTKKQKHQHPNDQTTKSPSDFSFK 60
           ME+ ETT+PITT+EKKE    EQDMEETETKK+ KK+ KKQKHQHPNDQTTKS SDFSFK
Sbjct: 1   MESTETTKPITTKEKKEVHKEEQDMEETETKKS-KKHNKKQKHQHPNDQTTKSASDFSFK 60

Query: 61  PSSHVKGLRFGGQFIVKSFTIRRARPLEFLQLLSFPATTRNSGHKPPFPSATAFIPTNFT 120
           P S VKGLRFGGQFIVKSFTIRRARPLE LQLLSFPATTRNSGHKPPFPSATAFIPTNFT
Sbjct: 61  PCSDVKGLRFGGQFIVKSFTIRRARPLELLQLLSFPATTRNSGHKPPFPSATAFIPTNFT 120

Query: 121 ILAHHAWHTLTLGLGTKKSKVLLFVFENEAMKAAIDRVWAAEIPLGEVNKKMIRGLSGCE 180
           ILAHHAWHTLTLGLGT+KSKVLLFVFENE MKAAIDRVW  EIPLGEVNKKMIRGLSGCE
Sbjct: 121 ILAHHAWHTLTLGLGTRKSKVLLFVFENETMKAAIDRVWPTEIPLGEVNKKMIRGLSGCE 180

Query: 181 MARFKFRKGCITFYVYAVRREGCFGFACADDLRTILESVVALKDFLDHTAMLAMPNQKTI 240
           MARFKFRKGCITFYVYAVRREGCFGF+C DDLRTILESVVALKDFLDHTAMLAMPNQ+TI
Sbjct: 181 MARFKFRKGCITFYVYAVRREGCFGFSCTDDLRTILESVVALKDFLDHTAMLAMPNQRTI 240

Query: 241 SFAAPPV 244
           SFA PPV
Sbjct: 241 SFAVPPV 246

[Close]
BLAST of CmoCh15G003960 vs. NCBI nr
Match: gi|778703427|ref|XP_004142759.2| (PREDICTED: uncharacterized protein LOC101214484 [Cucumis sativus])

HSP 1 Score: 424.9 bits (1091), Expect = 1.6e-115
Identity = 221/247 (89.47%), Postives = 230/247 (93.12%), Query Frame = 1 

Query: 1   MEAAETTEPITTREKKE----EQDMEETETKKNNKKNTKKQKHQHPNDQTTKSPSDFSFK 60
           ME+ ETT+PITT+EKKE    EQ+MEETETKK+ KKN KKQKHQHPNDQTTKS  DFSFK
Sbjct: 1   MESTETTKPITTKEKKEVHIEEQEMEETETKKS-KKNNKKQKHQHPNDQTTKS--DFSFK 60

Query: 61  PSSHVKGLRFGGQFIVKSFTIRRARPLEFLQLLSFPATTRNSGHKPPFPSATAFIPTNFT 120
           P S VKGLRFGGQFIVKSFTIRRARPLE L+LLSFPATTRNSGHKPPFPSATAFIPTNFT
Sbjct: 61  PCSDVKGLRFGGQFIVKSFTIRRARPLELLRLLSFPATTRNSGHKPPFPSATAFIPTNFT 120

Query: 121 ILAHHAWHTLTLGLGTKKSKVLLFVFENEAMKAAIDRVWAAEIPLGEVNKKMIRGLSGCE 180
           ILAHHAWHTLTLGLGT+KSKVLLFVFENE MKAAIDRVW  EIPLGEVNKKMIRGLSGCE
Sbjct: 121 ILAHHAWHTLTLGLGTRKSKVLLFVFENETMKAAIDRVWPTEIPLGEVNKKMIRGLSGCE 180

Query: 181 MARFKFRKGCITFYVYAVRREGCFGFACADDLRTILESVVALKDFLDHTAMLAMPNQKTI 240
           MARFKFRKGCITFYVYAVRREGCFGF+C DDLRTILESVVALKDFLDHTAMLAMPNQ+TI
Sbjct: 181 MARFKFRKGCITFYVYAVRREGCFGFSCTDDLRTILESVVALKDFLDHTAMLAMPNQRTI 240

Query: 241 SFAAPPV 244
           SFA PPV
Sbjct: 241 SFAVPPV 244

[Close]
BLAST of CmoCh15G003960 vs. NCBI nr
Match: gi|590563336|ref|XP_007009342.1| (Uncharacterized protein TCM_042769 [Theobroma cacao])

HSP 1 Score: 354.4 bits (908), Expect = 2.7e-94
Identity = 173/215 (80.47%), Postives = 192/215 (89.30%), Query Frame = 1 

Query: 27  KKNNKKNTKKQKHQHPNDQTTKSPSDFSFKPSSHVKGLRFGGQFIVKSFTIRRARPLEFL 86
           +K   K  KKQKHQHPNDQTTK  SDFSFKPSS VKGLRFGGQFIVKSFTIRRARPLE L
Sbjct: 3   EKEKNKKNKKQKHQHPNDQTTKPASDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLELL 62

Query: 87  QLLSFPATTRNSGHKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFENEA 146
           +LL FP  ++++ +K PFPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKVLLFVFE+EA
Sbjct: 63  KLLDFPPISKSNSNKLPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFESEA 122

Query: 147 MKAAIDRVWAAEIPLGEVNKKMIRGLSGCEMARFKFRKGCITFYVYAVRREGCFGFACAD 206
           MK A+DR+W  EIPLGEVNKK+IRGL+GCEMARFKFRKGCITFYVYAVR+ G  GF+CAD
Sbjct: 123 MKLAVDRIWPPEIPLGEVNKKLIRGLTGCEMARFKFRKGCITFYVYAVRKVGNMGFSCAD 182

Query: 207 DLRTILESVVALKDFLDHTAMLAMPNQKTISFAAP 242
           DLRTIL+SVVALKDFLDHTAMLAMPNQ++IS+  P
Sbjct: 183 DLRTILQSVVALKDFLDHTAMLAMPNQRSISYCPP 217

[Close]
BLAST of CmoCh15G003960 vs. NCBI nr
Match: gi|743780407|ref|XP_011029486.1| (PREDICTED: uncharacterized protein LOC105129188 [Populus euphratica])

HSP 1 Score: 351.3 bits (900), Expect = 2.3e-93
Identity = 173/217 (79.72%), Postives = 195/217 (89.86%), Query Frame = 1 

Query: 28  KNNKKNTKKQKHQHPNDQTTKSPSDFSFKPSSHVKGLRFGGQFIVKSFTIRRARPLEFLQ 87
           K  KK+ KKQKHQHPNDQTTK  SDFSFKPSS VKGLRFGGQFIVKSFTIRRARPLE L+
Sbjct: 4   KEKKKHHKKQKHQHPNDQTTKPSSDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLELLK 63

Query: 88  LLSFPATTRNS-GHKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFENEA 147
           +LS+P T +NS  +K PFPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKVLLFVFE+E+
Sbjct: 64  VLSYPPTNKNSDNNKTPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFESES 123

Query: 148 MKAAIDRVWAAEIPLGEVNKKMIRGLSGCEMARFKFRKGCITFYVYAVRREGCFGFACAD 207
           MK A+DR+W  EIPLGEVNKK+IRGL+GCEMARFKFRKGCITFYVYAVRR G  GF+CAD
Sbjct: 124 MKMAVDRIWPPEIPLGEVNKKLIRGLNGCEMARFKFRKGCITFYVYAVRRVGNMGFSCAD 183

Query: 208 DLRTILESVVALKDFLDHTAMLAMPNQKTISFAAPPV 244
           DL+ IL+SVVAL DFLDHTAMLAMP+Q++I++A+P V
Sbjct: 184 DLKIILQSVVALNDFLDHTAMLAMPHQRSINYASPQV 220

[Close]
BLAST of CmoCh15G003960 vs. NCBI nr
Match: gi|224100987|ref|XP_002312096.1| (hypothetical protein POPTR_0008s05590g [Populus trichocarpa])

HSP 1 Score: 350.1 bits (897), Expect = 5.1e-93
Identity = 172/217 (79.26%), Postives = 195/217 (89.86%), Query Frame = 1 

Query: 28  KNNKKNTKKQKHQHPNDQTTKSPSDFSFKPSSHVKGLRFGGQFIVKSFTIRRARPLEFLQ 87
           K  KK+ KKQKHQHPNDQTTK  SDFSFKPSS VKGLRFGGQFIVKSFTIRRARPLE L+
Sbjct: 4   KEKKKHHKKQKHQHPNDQTTKPSSDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLELLK 63

Query: 88  LLSFPATTRNS-GHKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFENEA 147
           +LS+P T +NS  +K PFPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKVLLFVFE+E+
Sbjct: 64  VLSYPPTNKNSDNNKTPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFESES 123

Query: 148 MKAAIDRVWAAEIPLGEVNKKMIRGLSGCEMARFKFRKGCITFYVYAVRREGCFGFACAD 207
           M+ A+DR+W  EIPLGEVNKK+IRGL+GCEMARFKFRKGCITFYVYAVRR G  GF+CAD
Sbjct: 124 MRLAVDRIWPPEIPLGEVNKKLIRGLNGCEMARFKFRKGCITFYVYAVRRVGNMGFSCAD 183

Query: 208 DLRTILESVVALKDFLDHTAMLAMPNQKTISFAAPPV 244
           DL+ IL+SVVAL DFLDHTAMLAMP+Q++I++A+P V
Sbjct: 184 DLKIILQSVVALNDFLDHTAMLAMPHQRSINYASPQV 220

The following BLAST results are available for this feature:
BLAST of CmoCh15G003960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh15G003960 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNW4_CUCSA1.1e-11589.47Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517120 PE=4 SV=1[more]
A0A061FNF3_THECC1.9e-9480.47Uncharacterized protein OS=Theobroma cacao GN=TCM_042769 PE=4 SV=1[more]
B9HMH8_POPTR3.5e-9379.26Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s05590g PE=4 SV=1[more]
B9HTI8_POPTR2.3e-9277.68Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s21140g PE=4 SV=2[more]
M5XKJ1_PRUPE5.6e-9180.54Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010997mg PE=4 SV=1[more]
BLAST of CmoCh15G003960 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G55420.11.2e-7164.86 unknown protein[more]
BLAST of CmoCh15G003960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659117960|ref|XP_008458876.1|1.0e-11790.28PREDICTED: uncharacterized protein LOC103498150 [Cucumis melo][more]
gi|778703427|ref|XP_004142759.2|1.6e-11589.47PREDICTED: uncharacterized protein LOC101214484 [Cucumis sativus][more]
gi|590563336|ref|XP_007009342.1|2.7e-9480.47Uncharacterized protein TCM_042769 [Theobroma cacao][more]
gi|743780407|ref|XP_011029486.1|2.3e-9379.72PREDICTED: uncharacterized protein LOC105129188 [Populus euphratica][more]
gi|224100987|ref|XP_002312096.1|5.1e-9379.26hypothetical protein POPTR_0008s05590g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006949 syncytium formation
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G003960.1CmoCh15G003960.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 14..34
scor
NoneNo IPR availablePANTHERPTHR36375FAMILY NOT NAMEDcoord: 23..252
score: 1.1E
NoneNo IPR availablePANTHERPTHR36375:SF1SUBFAMILY NOT NAMEDcoord: 23..252
score: 1.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh15G003960Cucsa.010830Cucumber (Gy14) v1cgycmoB0543
CmoCh15G003960CmaCh15G003850Cucurbita maxima (Rimu)cmacmoB287
CmoCh15G003960CmaCh04G026450Cucurbita maxima (Rimu)cmacmoB692
CmoCh15G003960Cla004661Watermelon (97103) v1cmowmB243
CmoCh15G003960Csa5G517120Cucumber (Chinese Long) v2cmocuB288
CmoCh15G003960MELO3C021630Melon (DHL92) v3.5.1cmomeB239
CmoCh15G003960ClCG09G019730Watermelon (Charleston Gray)cmowcgB233
CmoCh15G003960CSPI05G17750Wild cucumber (PI 183967)cmocpiB297
CmoCh15G003960Lsi02G016310Bottle gourd (USVL1VR-Ls)cmolsiB261
CmoCh15G003960Cp4.1LG01g23680Cucurbita pepo (Zucchini)cmocpeB279
CmoCh15G003960MELO3C021630.2Melon (DHL92) v3.6.1cmomedB271
CmoCh15G003960CsaV3_5G026670Cucumber (Chinese Long) v3cmocucB0349
CmoCh15G003960Cla97C09G181180Watermelon (97103) v2cmowmbB305
CmoCh15G003960Bhi06G000529Wax gourdcmowgoB0374
CmoCh15G003960CsGy5G017410Cucumber (Gy14) v2cgybcmoB585
CmoCh15G003960Carg04498Silver-seed gourdcarcmoB0936
CmoCh15G003960Carg02347Silver-seed gourdcarcmoB0362
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh15G003960CmoCh04G027680Cucurbita moschata (Rifu)cmocmoB261
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh15G003960Cucumber (Chinese Long) v3cmocucB0335
CmoCh15G003960Watermelon (97103) v2cmowmbB284
CmoCh15G003960Cucurbita moschata (Rifu)cmocmoB252
CmoCh15G003960Cucurbita moschata (Rifu)cmocmoB258
CmoCh15G003960Cucurbita moschata (Rifu)cmocmoB259
CmoCh15G003960Cucumber (Gy14) v1cgycmoB0466
CmoCh15G003960Cucurbita maxima (Rimu)cmacmoB689
CmoCh15G003960Wild cucumber (PI 183967)cmocpiB304
CmoCh15G003960Cucumber (Chinese Long) v2cmocuB295
CmoCh15G003960Cucurbita pepo (Zucchini)cmocpeB266
CmoCh15G003960Cucurbita pepo (Zucchini)cmocpeB268
CmoCh15G003960Cucurbita pepo (Zucchini)cmocpeB277
CmoCh15G003960Bottle gourd (USVL1VR-Ls)cmolsiB260
CmoCh15G003960Bottle gourd (USVL1VR-Ls)cmolsiB273
CmoCh15G003960Cucumber (Gy14) v2cgybcmoB462
CmoCh15G003960Melon (DHL92) v3.6.1cmomedB289
CmoCh15G003960Melon (DHL92) v3.6.1cmomedB310
CmoCh15G003960Silver-seed gourdcarcmoB0916