Carg02347 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02347
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	S-adenosylmethionine:tRNA ribosyltransferase-isomerase
Location	Cucurbita_argyrosperma_scaffold_007 : 1300356 .. 1301099 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCAGCAGAAACAACAGAGCCCATCACCACAAGGGAGAAGAAAGAAGAACAAGACATGGAGGAAACAGAGACAAAGAAGAACAACAAGAAGAACACCAAGAAGCAAAAACATCAACACCCAAATGACCAAACCACAAAATCACCCTCTGATTTCTCTTTCAAGCCAAGCTCTCATGTAAAGGGTCTCAGATTCGGTGGCCAATTCATCGTTAAATCCTTCACAATCCGGCGAGCTAGGCCTTTAGAGTTTCTCCAGCTCCTCTCTTTTCCGGCCACCACCAGAAATTCCGGCCATAAACCGCCGTTCCCATCTGCCACAGCTTTCATTCCCACAAACTTCACAATCCTCGCTCACCATGCGTGGCACACACTCACTCTAGGCCTCGGCACAAAGAAGTCCAAAGTTCTTCTCTTTGTGTTTGAAAATGAGGCCATGAAGGCAGCAATAGACCGTGTTTGGGCAGCAGAAATCCCTCTAGGCGAAGTGAATAAGAAGATGATTAGAGGGCTAAGTGGGTGTGAGATGGCTCGGTTCAAATTCAGAAAAGGGTGCATAACTTTTTATGTTTATGCAGTTCGAAGAGAAGGGTGTTTTGGGTTTGCTTGTGCTGATGATTTGAGAACCATTTTGGAGTCTGTTGTGGCTCTCAAAGATTTCTTGGATCACACTGCTATGCTTGCTATGCCTAACCAGAAAACCATCAGCTTTGCGGCGCCTCCTGTTGCAATGGCTTATTAG

mRNA sequence

ATGGAAGCAGCAGAAACAACAGAGCCCATCACCACAAGGGAGAAGAAAGAAGAACAAGACATGGAGGAAACAGAGACAAAGAAGAACAACAAGAAGAACACCAAGAAGCAAAAACATCAACACCCAAATGACCAAACCACAAAATCACCCTCTGATTTCTCTTTCAAGCCAAGCTCTCATGTAAAGGGTCTCAGATTCGGTGGCCAATTCATCGTTAAATCCTTCACAATCCGGCGAGCTAGGCCTTTAGAGTTTCTCCAGCTCCTCTCTTTTCCGGCCACCACCAGAAATTCCGGCCATAAACCGCCGTTCCCATCTGCCACAGCTTTCATTCCCACAAACTTCACAATCCTCGCTCACCATGCGTGGCACACACTCACTCTAGGCCTCGGCACAAAGAAGTCCAAAGTTCTTCTCTTTGTGTTTGAAAATGAGGCCATGAAGGCAGCAATAGACCGTGTTTGGGCAGCAGAAATCCCTCTAGGCGAAGTGAATAAGAAGATGATTAGAGGGCTAAGTGGGTGTGAGATGGCTCGGTTCAAATTCAGAAAAGGGTGCATAACTTTTTATGTTTATGCAGTTCGAAGAGAAGGGTGTTTTGGGTTTGCTTGTGCTGATGATTTGAGAACCATTTTGGAGTCTGTTGTGGCTCTCAAAGATTTCTTGGATCACACTGCTATGCTTGCTATGCCTAACCAGAAAACCATCAGCTTTGCGGCGCCTCCTGTTGCAATGGCTTATTAG

Coding sequence (CDS)

ATGGAAGCAGCAGAAACAACAGAGCCCATCACCACAAGGGAGAAGAAAGAAGAACAAGACATGGAGGAAACAGAGACAAAGAAGAACAACAAGAAGAACACCAAGAAGCAAAAACATCAACACCCAAATGACCAAACCACAAAATCACCCTCTGATTTCTCTTTCAAGCCAAGCTCTCATGTAAAGGGTCTCAGATTCGGTGGCCAATTCATCGTTAAATCCTTCACAATCCGGCGAGCTAGGCCTTTAGAGTTTCTCCAGCTCCTCTCTTTTCCGGCCACCACCAGAAATTCCGGCCATAAACCGCCGTTCCCATCTGCCACAGCTTTCATTCCCACAAACTTCACAATCCTCGCTCACCATGCGTGGCACACACTCACTCTAGGCCTCGGCACAAAGAAGTCCAAAGTTCTTCTCTTTGTGTTTGAAAATGAGGCCATGAAGGCAGCAATAGACCGTGTTTGGGCAGCAGAAATCCCTCTAGGCGAAGTGAATAAGAAGATGATTAGAGGGCTAAGTGGGTGTGAGATGGCTCGGTTCAAATTCAGAAAAGGGTGCATAACTTTTTATGTTTATGCAGTTCGAAGAGAAGGGTGTTTTGGGTTTGCTTGTGCTGATGATTTGAGAACCATTTTGGAGTCTGTTGTGGCTCTCAAAGATTTCTTGGATCACACTGCTATGCTTGCTATGCCTAACCAGAAAACCATCAGCTTTGCGGCGCCTCCTGTTGCAATGGCTTATTAG

Protein sequence

MEAAETTEPITTREKKEEQDMEETETKKNNKKNTKKQKHQHPNDQTTKSPSDFSFKPSSHVKGLRFGGQFIVKSFTIRRARPLEFLQLLSFPATTRNSGHKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFENEAMKAAIDRVWAAEIPLGEVNKKMIRGLSGCEMARFKFRKGCITFYVYAVRREGCFGFACADDLRTILESVVALKDFLDHTAMLAMPNQKTISFAAPPVAMAY

Homology

[Close]

BLAST of Carg02347 vs. NCBI nr
Match: XP_023549698.1 (uncharacterized protein LOC111808119 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422.9 bits (1086), Expect = 7.3e-115
Identity = 243/247 (98.38%), Postives = 243/247 (98.38%), Query Frame = 0


Query: 1   MEAAETTEPITTREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQTTKSPSDFSFKPSSH 60
           MEAAETTEPITTR XXXXXXXXXXXXXXXXXXXXXXXXXXXX DQTTKS SDFSFKPSSH
Sbjct: 1   MEAAETTEPITTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDQTTKSASDFSFKPSSH 60

Query: 61  VKGLRFGGQFIVKSFTIRRARPLEFLQLLSFPATTRNSGHKPPFPSATAFIPTNFTILAH 120
           VKGLRFGGQFIVKSFTIRRARPLEFLQLLSFPATTRNSGHKPPFPSAT FIPTNFTILAH
Sbjct: 61  VKGLRFGGQFIVKSFTIRRARPLEFLQLLSFPATTRNSGHKPPFPSATTFIPTNFTILAH 120

Query: 121 HAWHTLTLGLGTKKSKVLLFVFENEAMKAAIDRVWAAEIPLGEVNKKMIRGLSGCEMARF 180
           HAWHTLTLGLGTKKSKVLLFVFENEAMKAAIDRVWAAEIPLGEVNKKMIRGLSGCEMARF
Sbjct: 121 HAWHTLTLGLGTKKSKVLLFVFENEAMKAAIDRVWAAEIPLGEVNKKMIRGLSGCEMARF 180

Query: 181 KFRKGCITFYVYAVRREGCFGFACADDLRTILESVVALKDFLDHTAMLAMPNQKTISFAA 240
           KFRKGCITFYVYAVRREGCFGFACADDLRTILESVVALKDFLDHTAMLAMPNQKTISFAA
Sbjct: 181 KFRKGCITFYVYAVRREGCFGFACADDLRTILESVVALKDFLDHTAMLAMPNQKTISFAA 240

Query: 241 PPVAMAY 248
           PPVAMAY
Sbjct: 241 PPVAMAY 247

[Close]

BLAST of Carg02347 vs. NCBI nr
Match: XP_022992697.1 (uncharacterized protein LOC111488960 [Cucurbita maxima])

HSP 1 Score: 419.5 bits (1077), Expect = 8.1e-114
Identity = 235/247 (95.14%), Postives = 236/247 (95.55%), Query Frame = 0


Query: 1   MEAAETTEPITTREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQTTKSPSDFSFKPSSH 60
           MEAAETTEPITTRE      XXXXXXXXXXXXXXXXXXXX   DQTTKSPSDFSFKP+SH
Sbjct: 1   MEAAETTEPITTRE----KKXXXXXXXXXXXXXXXXXXXXHPNDQTTKSPSDFSFKPTSH 60

Query: 61  VKGLRFGGQFIVKSFTIRRARPLEFLQLLSFPATTRNSGHKPPFPSATAFIPTNFTILAH 120
           VKGLRFGGQ IVKSFTIRRARPLEFLQLLSFPATTRNS HKPPFPSATAFIPTNFTILAH
Sbjct: 61  VKGLRFGGQLIVKSFTIRRARPLEFLQLLSFPATTRNSDHKPPFPSATAFIPTNFTILAH 120

Query: 121 HAWHTLTLGLGTKKSKVLLFVFENEAMKAAIDRVWAAEIPLGEVNKKMIRGLSGCEMARF 180
           HAWHTLTLGLGTKKSKVLLFVFENEAMKAAIDRVWAAEIPLGEVNKKMIRGLSGCEMARF
Sbjct: 121 HAWHTLTLGLGTKKSKVLLFVFENEAMKAAIDRVWAAEIPLGEVNKKMIRGLSGCEMARF 180

Query: 181 KFRKGCITFYVYAVRREGCFGFACADDLRTILESVVALKDFLDHTAMLAMPNQKTISFAA 240
           KFRKGCITFYVYAVRREGCFGFACADDLRTILESVVALKDFLDHTAMLAMPNQKTISFAA
Sbjct: 181 KFRKGCITFYVYAVRREGCFGFACADDLRTILESVVALKDFLDHTAMLAMPNQKTISFAA 240

Query: 241 PPVAMAY 248
           PPVAMAY
Sbjct: 241 PPVAMAY 243

[Close]

BLAST of Carg02347 vs. NCBI nr
Match: XP_022939264.1 (uncharacterized protein LOC111445234 [Cucurbita moschata])

HSP 1 Score: 418.7 bits (1075), Expect = 1.4e-113
Identity = 241/247 (97.57%), Postives = 241/247 (97.57%), Query Frame = 0


Query: 1   MEAAETTEPITTREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQTTKSPSDFSFKPSSH 60
           MEAAETTEP     XXXXXXXXXXXXXXXXXXXXXXXXXXXX DQTTKSPSDFSFKPSSH
Sbjct: 11  MEAAETTEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDQTTKSPSDFSFKPSSH 70

Query: 61  VKGLRFGGQFIVKSFTIRRARPLEFLQLLSFPATTRNSGHKPPFPSATAFIPTNFTILAH 120
           VKGLRFGGQFIVKSFTIRRARPLEFLQLLSFPATTRNSGHKPPFPSATAFIPTNFTILAH
Sbjct: 71  VKGLRFGGQFIVKSFTIRRARPLEFLQLLSFPATTRNSGHKPPFPSATAFIPTNFTILAH 130

Query: 121 HAWHTLTLGLGTKKSKVLLFVFENEAMKAAIDRVWAAEIPLGEVNKKMIRGLSGCEMARF 180
           HAWHTLTLGLGTKKSKVLLFVFENEAMKAAIDRVWAAEIPLGEVNKKMIRGLSGCEMARF
Sbjct: 131 HAWHTLTLGLGTKKSKVLLFVFENEAMKAAIDRVWAAEIPLGEVNKKMIRGLSGCEMARF 190

Query: 181 KFRKGCITFYVYAVRREGCFGFACADDLRTILESVVALKDFLDHTAMLAMPNQKTISFAA 240
           KFRKGCITFYVYAVRREGCFGFACADDLRTILESVVALKDFLDHTAMLAMPNQKTISFAA
Sbjct: 191 KFRKGCITFYVYAVRREGCFGFACADDLRTILESVVALKDFLDHTAMLAMPNQKTISFAA 250

Query: 241 PPVAMAY 248
           PPVAMAY
Sbjct: 251 PPVAMAY 257

[Close]

BLAST of Carg02347 vs. NCBI nr
Match: XP_008458876.1 (PREDICTED: uncharacterized protein LOC103498150 [Cucumis melo])

HSP 1 Score: 394.0 bits (1011), Expect = 3.6e-106
Identity = 230/250 (92.00%), Postives = 236/250 (94.40%), Query Frame = 0


Query: 1   MEAAETTEPITTRE---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQTTKSPSDFSFKP 60
           ME+ ETT+PITT+E   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX QTTKS SDFSFKP
Sbjct: 1   MESTETTKPITTKEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTTKSASDFSFKP 60

Query: 61  SSHVKGLRFGGQFIVKSFTIRRARPLEFLQLLSFPATTRNSGHKPPFPSATAFIPTNFTI 120
            S VKGLRFGGQFIVKSFTIRRARPLE LQLLSFPATTRNSGHKPPFPSATAFIPTNFTI
Sbjct: 61  CSDVKGLRFGGQFIVKSFTIRRARPLELLQLLSFPATTRNSGHKPPFPSATAFIPTNFTI 120

Query: 121 LAHHAWHTLTLGLGTKKSKVLLFVFENEAMKAAIDRVWAAEIPLGEVNKKMIRGLSGCEM 180
           LAHHAWHTLTLGLGT+KSKVLLFVFENE MKAAIDRVW  EIPLGEVNKKMIRGLSGCEM
Sbjct: 121 LAHHAWHTLTLGLGTRKSKVLLFVFENETMKAAIDRVWPTEIPLGEVNKKMIRGLSGCEM 180

Query: 181 ARFKFRKGCITFYVYAVRREGCFGFACADDLRTILESVVALKDFLDHTAMLAMPNQKTIS 240
           ARFKFRKGCITFYVYAVRREGCFGF+C DDLRTILESVVALKDFLDHTAMLAMPNQ+TIS
Sbjct: 181 ARFKFRKGCITFYVYAVRREGCFGFSCTDDLRTILESVVALKDFLDHTAMLAMPNQRTIS 240

Query: 241 FAAPPVAMAY 248
           FA PPVAMAY
Sbjct: 241 FAVPPVAMAY 250

[Close]

BLAST of Carg02347 vs. NCBI nr
Match: XP_022991077.1 (uncharacterized protein LOC111487783 [Cucurbita maxima])

HSP 1 Score: 386.7 bits (992), Expect = 5.8e-104
Identity = 189/204 (92.65%), Postives = 198/204 (97.06%), Query Frame = 0


Query: 44  DQTTKSPSDFSFKPSSHVKGLRFGGQFIVKSFTIRRARPLEFLQLLSFPATTRNSGHKPP 103
           DQ+T+S SDF+FKPSS VKGLRFGGQFIVKSFTIRRARPLE L+LLSFPATTRNSG+KPP
Sbjct: 26  DQSTESASDFTFKPSSDVKGLRFGGQFIVKSFTIRRARPLELLRLLSFPATTRNSGNKPP 85

Query: 104 FPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFENEAMKAAIDRVWAAEIPLGE 163
           FPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKV+LFVFENEAMKAAIDRVW  EIPLGE
Sbjct: 86  FPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFENEAMKAAIDRVWPTEIPLGE 145

Query: 164 VNKKMIRGLSGCEMARFKFRKGCITFYVYAVRREGCFGFACADDLRTILESVVALKDFLD 223
           VNKKMIRGL GCEMARFKFRKGCITFYVYAVRREGCFGF+CADDLRTILESVVALKDFLD
Sbjct: 146 VNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREGCFGFSCADDLRTILESVVALKDFLD 205

Query: 224 HTAMLAMPNQKTISFAAPPVAMAY 248
           HTAMLAMP+Q+TISFAAPPVAMAY
Sbjct: 206 HTAMLAMPHQRTISFAAPPVAMAY 229

[Close]

BLAST of Carg02347 vs. TAIR10
Match: AT3G55420.1 (unknown protein)

HSP 1 Score: 268.5 bits (685), Expect = 4.2e-72
Identity = 139/202 (68.81%), Postives = 161/202 (79.70%), Query Frame = 0


Query: 51  SDFSFKPSSHVKGLRFGGQFIVKSFTIRRARPLEFLQLLSFPATTRNSGHKPPFPSATAF 110
           SD SFKPSS VKGL+FGGQ IVKSFTIRRAR  E L+LLS P     S   PP  S  A+
Sbjct: 20  SDISFKPSSDVKGLKFGGQIIVKSFTIRRARTFELLKLLSLP-----SSSSPPLLSTAAY 79

Query: 111 IPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFENEAMK----AAIDRVWAAEIPLGEVNK 170
           +PTNFTILAHHAWHTLTLGLGT+KSKV++FVFE EAMK    AA   +W +EIPLG+VNK
Sbjct: 80  LPTNFTILAHHAWHTLTLGLGTRKSKVVVFVFETEAMKSSVVAAEGGIWPSEIPLGDVNK 139

Query: 171 KMIRGLSGCEMARFKFRKGCITFYVYAVRREGCFGFACADDLRTILESVVALKDFLDHTA 230
           KMIR L   EMARFKFRKGCITFYVYAVR  G  GFA A+DL+ IL++VVALKDF+DHTA
Sbjct: 140 KMIRKLKNWEMARFKFRKGCITFYVYAVRNAGNEGFAAAEDLKVILQAVVALKDFMDHTA 199

Query: 231 MLAMPNQKTISFAA-PPVAMAY 248
           ML MP+QK+I++++ PP AMA+
Sbjct: 200 MLVMPHQKSINYSSCPPFAMAH 216

[Close]

BLAST of Carg02347 vs. TrEMBL
Match: tr|A0A1S3C904|A0A1S3C904_CUCME (uncharacterized protein LOC103498150 OS=Cucumis melo OX=3656 GN=LOC103498150 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 2.4e-106
Identity = 230/250 (92.00%), Postives = 236/250 (94.40%), Query Frame = 0


Query: 1   MEAAETTEPITTRE---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQTTKSPSDFSFKP 60
           ME+ ETT+PITT+E   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX QTTKS SDFSFKP
Sbjct: 1   MESTETTKPITTKEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTTKSASDFSFKP 60

Query: 61  SSHVKGLRFGGQFIVKSFTIRRARPLEFLQLLSFPATTRNSGHKPPFPSATAFIPTNFTI 120
            S VKGLRFGGQFIVKSFTIRRARPLE LQLLSFPATTRNSGHKPPFPSATAFIPTNFTI
Sbjct: 61  CSDVKGLRFGGQFIVKSFTIRRARPLELLQLLSFPATTRNSGHKPPFPSATAFIPTNFTI 120

Query: 121 LAHHAWHTLTLGLGTKKSKVLLFVFENEAMKAAIDRVWAAEIPLGEVNKKMIRGLSGCEM 180
           LAHHAWHTLTLGLGT+KSKVLLFVFENE MKAAIDRVW  EIPLGEVNKKMIRGLSGCEM
Sbjct: 121 LAHHAWHTLTLGLGTRKSKVLLFVFENETMKAAIDRVWPTEIPLGEVNKKMIRGLSGCEM 180

Query: 181 ARFKFRKGCITFYVYAVRREGCFGFACADDLRTILESVVALKDFLDHTAMLAMPNQKTIS 240
           ARFKFRKGCITFYVYAVRREGCFGF+C DDLRTILESVVALKDFLDHTAMLAMPNQ+TIS
Sbjct: 181 ARFKFRKGCITFYVYAVRREGCFGFSCTDDLRTILESVVALKDFLDHTAMLAMPNQRTIS 240

Query: 241 FAAPPVAMAY 248
           FA PPVAMAY
Sbjct: 241 FAVPPVAMAY 250

[Close]

BLAST of Carg02347 vs. TrEMBL
Match: tr|A0A0A0KNW4|A0A0A0KNW4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517120 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 5.0e-104
Identity = 228/250 (91.20%), Postives = 235/250 (94.00%), Query Frame = 0


Query: 1   MEAAETTEPITTRE---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQTTKSPSDFSFKP 60
           ME+ ETT+PITT+E   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX QTTK  SDFSFKP
Sbjct: 1   MESTETTKPITTKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTTK--SDFSFKP 60

Query: 61  SSHVKGLRFGGQFIVKSFTIRRARPLEFLQLLSFPATTRNSGHKPPFPSATAFIPTNFTI 120
            S VKGLRFGGQFIVKSFTIRRARPLE L+LLSFPATTRNSGHKPPFPSATAFIPTNFTI
Sbjct: 61  CSDVKGLRFGGQFIVKSFTIRRARPLELLRLLSFPATTRNSGHKPPFPSATAFIPTNFTI 120

Query: 121 LAHHAWHTLTLGLGTKKSKVLLFVFENEAMKAAIDRVWAAEIPLGEVNKKMIRGLSGCEM 180
           LAHHAWHTLTLGLGT+KSKVLLFVFENE MKAAIDRVW  EIPLGEVNKKMIRGLSGCEM
Sbjct: 121 LAHHAWHTLTLGLGTRKSKVLLFVFENETMKAAIDRVWPTEIPLGEVNKKMIRGLSGCEM 180

Query: 181 ARFKFRKGCITFYVYAVRREGCFGFACADDLRTILESVVALKDFLDHTAMLAMPNQKTIS 240
           ARFKFRKGCITFYVYAVRREGCFGF+C DDLRTILESVVALKDFLDHTAMLAMPNQ+TIS
Sbjct: 181 ARFKFRKGCITFYVYAVRREGCFGFSCTDDLRTILESVVALKDFLDHTAMLAMPNQRTIS 240

Query: 241 FAAPPVAMAY 248
           FA PPVAMAY
Sbjct: 241 FAVPPVAMAY 248

[Close]

BLAST of Carg02347 vs. TrEMBL
Match: tr|A0A2I4E4V5|A0A2I4E4V5_9ROSI (uncharacterized protein LOC108986302 OS=Juglans regia OX=51240 GN=LOC108986302 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 4.4e-92
Identity = 172/207 (83.09%), Postives = 188/207 (90.82%), Query Frame = 0


Query: 44  DQTTKSPSDFSFKPSSHVKGLRFGGQFIVKSFTIRRARPLEFLQLLSFPATT---RNSGH 103
           DQTTK  SDFSFKPSS VKGLRFGGQFIVKSFTIRRARPLE LQLLSFP T     N+ +
Sbjct: 19  DQTTKPNSDFSFKPSSDVKGLRFGGQFIVKSFTIRRARPLELLQLLSFPPTNPKPNNNNN 78

Query: 104 KPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFENEAMKAAIDRVWAAEIP 163
           K PFPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKVLLFVFE+E MK A DRVW +EIP
Sbjct: 79  KLPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFESEIMKTATDRVWPSEIP 138

Query: 164 LGEVNKKMIRGLSGCEMARFKFRKGCITFYVYAVRREGCFGFACADDLRTILESVVALKD 223
           LG+VNK++IRGL+GCEMARFKFRKGCITFYVYAVR+ GCFGF+CADDLRTIL+SVVALKD
Sbjct: 139 LGQVNKRLIRGLTGCEMARFKFRKGCITFYVYAVRQVGCFGFSCADDLRTILQSVVALKD 198

Query: 224 FLDHTAMLAMPNQKTISFAAPPVAMAY 248
           FLDHTAMLAMPNQ++IS+ APPVAMA+
Sbjct: 199 FLDHTAMLAMPNQRSISY-APPVAMAH 224

[Close]

BLAST of Carg02347 vs. TrEMBL
Match: tr|A0A061FNF3|A0A061FNF3_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_042769 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 6.4e-91
Identity = 167/204 (81.86%), Postives = 186/204 (91.18%), Query Frame = 0


Query: 44  DQTTKSPSDFSFKPSSHVKGLRFGGQFIVKSFTIRRARPLEFLQLLSFPATTRNSGHKPP 103
           DQTTK  SDFSFKPSS VKGLRFGGQFIVKSFTIRRARPLE L+LL FP  ++++ +K P
Sbjct: 20  DQTTKPASDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLELLKLLDFPPISKSNSNKLP 79

Query: 104 FPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFENEAMKAAIDRVWAAEIPLGE 163
           FPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKVLLFVFE+EAMK A+DR+W  EIPLGE
Sbjct: 80  FPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFESEAMKLAVDRIWPPEIPLGE 139

Query: 164 VNKKMIRGLSGCEMARFKFRKGCITFYVYAVRREGCFGFACADDLRTILESVVALKDFLD 223
           VNKK+IRGL+GCEMARFKFRKGCITFYVYAVR+ G  GF+CADDLRTIL+SVVALKDFLD
Sbjct: 140 VNKKLIRGLTGCEMARFKFRKGCITFYVYAVRKVGNMGFSCADDLRTILQSVVALKDFLD 199

Query: 224 HTAMLAMPNQKTISFAAPPVAMAY 248
           HTAMLAMPNQ++IS+  PPVAMA+
Sbjct: 200 HTAMLAMPNQRSISY-CPPVAMAH 222

[Close]

BLAST of Carg02347 vs. TrEMBL
Match: tr|B9SXY0|B9SXY0_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1207230 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 4.7e-86
Identity = 161/211 (76.30%), Postives = 181/211 (85.78%), Query Frame = 0


Query: 44  DQTTKSPSDFSFKPSSHVKGLRFGGQFIVKSFTIRRARPLEFLQLLSFPATTRNSGH--- 103
           DQTTK  SDFSFKPSS VKGLRFGGQFI+KSFTIRRARPLE L++LS+P T  N+     
Sbjct: 19  DQTTKPTSDFSFKPSSEVKGLRFGGQFIIKSFTIRRARPLELLKVLSYPPTNSNNSSSNK 78

Query: 104 ----KPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFENEAMKAAIDRVWA 163
               K PFPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKVL+FVFE+E+MK A DR+W 
Sbjct: 79  NGTTKIPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLVFVFESESMKLATDRIWP 138

Query: 164 AEIPLGEVNKKMIRGLSGCEMARFKFRKGCITFYVYAVRREGCFGFACADDLRTILESVV 223
            EIPLGEVNKK+IRGLSG EMARFKFRKGCITFYVYAVRR G  GF+CADDLRTIL+SVV
Sbjct: 139 PEIPLGEVNKKLIRGLSGAEMARFKFRKGCITFYVYAVRRVGTMGFSCADDLRTILQSVV 198

Query: 224 ALKDFLDHTAMLAMPNQKTISFAAPPVAMAY 248
           +L DFLDHTAMLAMP+Q++I++   PVAMA+
Sbjct: 199 SLNDFLDHTAMLAMPHQRSINYNQAPVAMAH 229

The following BLAST results are available for this feature:

BLAST of Carg02347 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549698.1	7.3e-115	98.38	uncharacterized protein LOC111808119 [Cucurbita pepo subsp. pepo]	[more]
XP_022992697.1	8.1e-114	95.14	uncharacterized protein LOC111488960 [Cucurbita maxima]	[more]
XP_022939264.1	1.4e-113	97.57	uncharacterized protein LOC111445234 [Cucurbita moschata]	[more]
XP_008458876.1	3.6e-106	92.00	PREDICTED: uncharacterized protein LOC103498150 [Cucumis melo]	[more]
XP_022991077.1	5.8e-104	92.65	uncharacterized protein LOC111487783 [Cucurbita maxima]	[more]

BLAST of Carg02347 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G55420.1	4.2e-72	68.81	unknown protein	[more]

BLAST of Carg02347 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg02347 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C904\|A0A1S3C904_CUCME	2.4e-106	92.00	uncharacterized protein LOC103498150 OS=Cucumis melo OX=3656 GN=LOC103498150 PE=...	[more]
tr\|A0A0A0KNW4\|A0A0A0KNW4_CUCSA	5.0e-104	91.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517120 PE=4 SV=1	[more]
tr\|A0A2I4E4V5\|A0A2I4E4V5_9ROSI	4.4e-92	83.09	uncharacterized protein LOC108986302 OS=Juglans regia OX=51240 GN=LOC108986302 P...	[more]
tr\|A0A061FNF3\|A0A061FNF3_THECC	6.4e-91	81.86	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_042769 PE=4 SV=1	[more]
tr\|B9SXY0\|B9SXY0_RICCO	4.7e-86	76.30	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1207230 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02347-RA	Carg02347-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 14..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..30
None	No IPR available	PANTHER	PTHR36375:SF1	SUBFAMILY NOT NAMED	coord: 27..246
None	No IPR available	PANTHER	PTHR36375	FAMILY NOT NAMED	coord: 27..246

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg02347	Cla004661	Watermelon (97103) v1	carwmB0246
Carg02347	Csa5G517120	Cucumber (Chinese Long) v2	carcuB0294
Carg02347	MELO3C021630	Melon (DHL92) v3.5.1	carmeB0260
Carg02347	ClCG09G019730	Watermelon (Charleston Gray)	carwcgB0249
Carg02347	CSPI05G17750	Wild cucumber (PI 183967)	carcpiB0298
Carg02347	Cucsa.010830	Cucumber (Gy14) v1	carcgyB0315
Carg02347	CmaCh04G026470	Cucurbita maxima (Rimu)	carcmaB0374
Carg02347	CmaCh15G003850	Cucurbita maxima (Rimu)	carcmaB0362
Carg02347	CmoCh04G027680	Cucurbita moschata (Rifu)	carcmoB0370
Carg02347	CmoCh15G003960	Cucurbita moschata (Rifu)	carcmoB0362
Carg02347	Lsi02G016310	Bottle gourd (USVL1VR-Ls)	carlsiB232
Carg02347	Cp4.1LG13g09300	Cucurbita pepo (Zucchini)	carcpeB0366
Carg02347	Cp4.1LG01g23680	Cucurbita pepo (Zucchini)	carcpeB0374
Carg02347	CsGy5G017410	Cucumber (Gy14) v2	carcgybB0281
Carg02347	MELO3C021630.2	Melon (DHL92) v3.6.1	carmedB0270
Carg02347	CsaV3_5G026670	Cucumber (Chinese Long) v3	carcucB0297
Carg02347	Cla97C09G181180	Watermelon (97103) v2	carwmbB0279
Carg02347	Bhi06G000529	Wax gourd	carwgoB0339

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg02347	Carg04498	Silver-seed gourd	carcarB306

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02347	Silver-seed gourd	carcarB303
Carg02347	Silver-seed gourd	carcarB310
Carg02347	Cucumber (Gy14) v1	carcgyB0312
Carg02347	Cucurbita maxima (Rimu)	carcmaB0371
Carg02347	Cucurbita maxima (Rimu)	carcmaB0373
Carg02347	Cucurbita moschata (Rifu)	carcmoB0368
Carg02347	Cucurbita moschata (Rifu)	carcmoB0369
Carg02347	Cucurbita pepo (Zucchini)	carcpeB0372
Carg02347	Wild cucumber (PI 183967)	carcpiB0300
Carg02347	Cucumber (Chinese Long) v2	carcuB0296
Carg02347	Bottle gourd (USVL1VR-Ls)	carlsiB241
Carg02347	Melon (DHL92) v3.5.1	carmeB0264
Carg02347	Melon (DHL92) v3.6.1	carmedB0275
Carg02347	Watermelon (Charleston Gray)	carwcgB0261
Carg02347	Watermelon (97103) v1	carwmB0253
Carg02347	Watermelon (97103) v2	carwmbB0270
Carg02347	Watermelon (97103) v2	carwmbB0271