Cp4.1LG01g23680 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g23680
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	BnaA09g34990D protein
Location	Cp4.1LG01 : 19410287 .. 19411039 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAGCAAAAGAGAGGCAACAAAACCCATCACCGCCTCAACAGAGAAGAAAGAAGAAGACATGGACGAAACAGAGATGAACAAGAACAAGAGCAAGAAGAACAAGATCAAGAAGCAAAAACACCAACACCCAAGTTACCAATCCACAAAATCAGCTTCTGATTTCAATTTCAAGCCAAGCTCTGATGTAAAGGGCCTCAGATTCGGCGGTCAGTTCATCGTTAAATCCTTCACAATCCGGCGAGCTAGGCCTTTAGAGCTCCTCCGCCTCCTGTCTTTTCCGGCCACCACCAGAAACTCCGGCAACAAACCGCCGTTCCCATCGGCCACAGCTTTCATTCCCACAAACTTCACAATCCTCGCTCACCATGCCTGGCACACCCTCACTCTAGGCCTTGGCACCAAAAAGTCCAAAGTTGTTCTCTTTGTGTTTGAAAATGAGGCCATGAAAGCAGCTATAGACCGTGTTTGGCCAACAGAAATCCCTCTTGGCGAAGTGAACAAGAAGATGATCAGAGGGCTATGTGGGTGCGAGATGGCTCGGTTCAAATTTAGAAAAGGGTGCATAACTTTTTATGTTTATGCAGTTCGAAGAGAAGGGTGTTTTGGGTTTTCTTGTGCTGATGATTTGAGAACCATTTTGGAATCCGTTGTTGCTCTCAAAGATTTCTTGGATCATACTGCTATGTTGGCTATGCCTCATCAGAGAACCATCAGCTTTGCTGCGCCTCCTGTTGCAATGGCTTATTAG

mRNA sequence

ATGAAAAGCAAAAGAGAGGCAACAAAACCCATCACCGCCTCAACAGAGAAGAAAGAAGAAGACATGGACGAAACAGAGATGAACAAGAACAAGAGCAAGAAGAACAAGATCAAGAAGCAAAAACACCAACACCCAAGTTACCAATCCACAAAATCAGCTTCTGATTTCAATTTCAAGCCAAGCTCTGATGTAAAGGGCCTCAGATTCGGCGGTCAGTTCATCGTTAAATCCTTCACAATCCGGCGAGCTAGGCCTTTAGAGCTCCTCCGCCTCCTGTCTTTTCCGGCCACCACCAGAAACTCCGGCAACAAACCGCCGTTCCCATCGGCCACAGCTTTCATTCCCACAAACTTCACAATCCTCGCTCACCATGCCTGGCACACCCTCACTCTAGGCCTTGGCACCAAAAAGTCCAAAGTTGTTCTCTTTGTGTTTGAAAATGAGGCCATGAAAGCAGCTATAGACCGTGTTTGGCCAACAGAAATCCCTCTTGGCGAAGTGAACAAGAAGATGATCAGAGGGCTATGTGGGTGCGAGATGGCTCGGTTCAAATTTAGAAAAGGGTGCATAACTTTTTATGTTTATGCAGTTCGAAGAGAAGGGTGTTTTGGGTTTTCTTGTGCTGATGATTTGAGAACCATTTTGGAATCCGTTGTTGCTCTCAAAGATTTCTTGGATCATACTGCTATGTTGGCTATGCCTCATCAGAGAACCATCAGCTTTGCTGCGCCTCCTGTTGCAATGGCTTATTAG

Coding sequence (CDS)

ATGAAAAGCAAAAGAGAGGCAACAAAACCCATCACCGCCTCAACAGAGAAGAAAGAAGAAGACATGGACGAAACAGAGATGAACAAGAACAAGAGCAAGAAGAACAAGATCAAGAAGCAAAAACACCAACACCCAAGTTACCAATCCACAAAATCAGCTTCTGATTTCAATTTCAAGCCAAGCTCTGATGTAAAGGGCCTCAGATTCGGCGGTCAGTTCATCGTTAAATCCTTCACAATCCGGCGAGCTAGGCCTTTAGAGCTCCTCCGCCTCCTGTCTTTTCCGGCCACCACCAGAAACTCCGGCAACAAACCGCCGTTCCCATCGGCCACAGCTTTCATTCCCACAAACTTCACAATCCTCGCTCACCATGCCTGGCACACCCTCACTCTAGGCCTTGGCACCAAAAAGTCCAAAGTTGTTCTCTTTGTGTTTGAAAATGAGGCCATGAAAGCAGCTATAGACCGTGTTTGGCCAACAGAAATCCCTCTTGGCGAAGTGAACAAGAAGATGATCAGAGGGCTATGTGGGTGCGAGATGGCTCGGTTCAAATTTAGAAAAGGGTGCATAACTTTTTATGTTTATGCAGTTCGAAGAGAAGGGTGTTTTGGGTTTTCTTGTGCTGATGATTTGAGAACCATTTTGGAATCCGTTGTTGCTCTCAAAGATTTCTTGGATCATACTGCTATGTTGGCTATGCCTCATCAGAGAACCATCAGCTTTGCTGCGCCTCCTGTTGCAATGGCTTATTAG

Protein sequence

MKSKREATKPITASTEKKEEDMDETEMNKNKSKKNKIKKQKHQHPSYQSTKSASDFNFKPSSDVKGLRFGGQFIVKSFTIRRARPLELLRLLSFPATTRNSGNKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFENEAMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREGCFGFSCADDLRTILESVVALKDFLDHTAMLAMPHQRTISFAAPPVAMAY

Homology

[Close]

BLAST of Cp4.1LG01g23680 vs. TrEMBL
Match: A0A0A0KNW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517120 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 6.1e-112
Identity = 214/247 (86.64%), Postives = 227/247 (91.90%), Query Frame = 1


Query: 6   EATKPITASTEKKEEDMDETEMNKNKSKKNKI--KKQKHQHPSYQSTKSASDFNFKPSSD 65
           E TKPIT   EKKE  ++E EM + ++KK+K   KKQKHQHP+ Q+TKS  DF+FKP SD
Sbjct: 5   ETTKPITTK-EKKEVHIEEQEMEETETKKSKKNNKKQKHQHPNDQTTKS--DFSFKPCSD 64

Query: 66  VKGLRFGGQFIVKSFTIRRARPLELLRLLSFPATTRNSGNKPPFPSATAFIPTNFTILAH 125
           VKGLRFGGQFIVKSFTIRRARPLELLRLLSFPATTRNSG+KPPFPSATAFIPTNFTILAH
Sbjct: 65  VKGLRFGGQFIVKSFTIRRARPLELLRLLSFPATTRNSGHKPPFPSATAFIPTNFTILAH 124

Query: 126 HAWHTLTLGLGTKKSKVVLFVFENEAMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMARF 185
           HAWHTLTLGLGT+KSKV+LFVFENE MKAAIDRVWPTEIPLGEVNKKMIRGL GCEMARF
Sbjct: 125 HAWHTLTLGLGTRKSKVLLFVFENETMKAAIDRVWPTEIPLGEVNKKMIRGLSGCEMARF 184

Query: 186 KFRKGCITFYVYAVRREGCFGFSCADDLRTILESVVALKDFLDHTAMLAMPHQRTISFAA 245
           KFRKGCITFYVYAVRREGCFGFSC DDLRTILESVVALKDFLDHTAMLAMP+QRTISFA 
Sbjct: 185 KFRKGCITFYVYAVRREGCFGFSCTDDLRTILESVVALKDFLDHTAMLAMPNQRTISFAV 244

Query: 246 PPVAMAY 251
           PPVAMAY
Sbjct: 245 PPVAMAY 248

[Close]

BLAST of Cp4.1LG01g23680 vs. TrEMBL
Match: A0A061FNF3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_042769 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 7.2e-97
Identity = 179/222 (80.63%), Postives = 201/222 (90.54%), Query Frame = 1


Query: 29  KNKSKKNKIKKQKHQHPSYQSTKSASDFNFKPSSDVKGLRFGGQFIVKSFTIRRARPLEL 88
           + K K  K KKQKHQHP+ Q+TK ASDF+FKPSS+VKGLRFGGQFIVKSFTIRRARPLEL
Sbjct: 2   EEKEKNKKNKKQKHQHPNDQTTKPASDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLEL 61

Query: 89  LRLLSFPATTRNSGNKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFENE 148
           L+LL FP  ++++ NK PFPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKV+LFVFE+E
Sbjct: 62  LKLLDFPPISKSNSNKLPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFESE 121

Query: 149 AMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREGCFGFSCA 208
           AMK A+DR+WP EIPLGEVNKK+IRGL GCEMARFKFRKGCITFYVYAVR+ G  GFSCA
Sbjct: 122 AMKLAVDRIWPPEIPLGEVNKKLIRGLTGCEMARFKFRKGCITFYVYAVRKVGNMGFSCA 181

Query: 209 DDLRTILESVVALKDFLDHTAMLAMPHQRTISFAAPPVAMAY 251
           DDLRTIL+SVVALKDFLDHTAMLAMP+QR+IS+  PPVAMA+
Sbjct: 182 DDLRTILQSVVALKDFLDHTAMLAMPNQRSISY-CPPVAMAH 222

[Close]

BLAST of Cp4.1LG01g23680 vs. TrEMBL
Match: B9HMH8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s05590g PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 6.1e-96
Identity = 176/223 (78.92%), Postives = 202/223 (90.58%), Query Frame = 1


Query: 29  KNKSKKNKIKKQKHQHPSYQSTKSASDFNFKPSSDVKGLRFGGQFIVKSFTIRRARPLEL 88
           ++K KK   KKQKHQHP+ Q+TK +SDF+FKPSS+VKGLRFGGQFIVKSFTIRRARPLEL
Sbjct: 2   EDKEKKKHHKKQKHQHPNDQTTKPSSDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLEL 61

Query: 89  LRLLSFPATTRNS-GNKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFEN 148
           L++LS+P T +NS  NK PFPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKV+LFVFE+
Sbjct: 62  LKVLSYPPTNKNSDNNKTPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFES 121

Query: 149 EAMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREGCFGFSC 208
           E+M+ A+DR+WP EIPLGEVNKK+IRGL GCEMARFKFRKGCITFYVYAVRR G  GFSC
Sbjct: 122 ESMRLAVDRIWPPEIPLGEVNKKLIRGLNGCEMARFKFRKGCITFYVYAVRRVGNMGFSC 181

Query: 209 ADDLRTILESVVALKDFLDHTAMLAMPHQRTISFAAPPVAMAY 251
           ADDL+ IL+SVVAL DFLDHTAMLAMPHQR+I++A+P VAMA+
Sbjct: 182 ADDLKIILQSVVALNDFLDHTAMLAMPHQRSINYASPQVAMAH 224

[Close]

BLAST of Cp4.1LG01g23680 vs. TrEMBL
Match: B9HTI8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s21140g PE=4 SV=2)

HSP 1 Score: 357.1 bits (915), Expect = 1.8e-95
Identity = 175/223 (78.48%), Postives = 201/223 (90.13%), Query Frame = 1


Query: 29  KNKSKKNKIKKQKHQHPSYQSTKSASDFNFKPSSDVKGLRFGGQFIVKSFTIRRARPLEL 88
           + K KK   KKQKHQHP+ Q++K +SDF+FKPSS+VKGLRFGGQFIVKSFTIRRARPLEL
Sbjct: 2   EEKEKKKHNKKQKHQHPNQQTSKPSSDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLEL 61

Query: 89  LRLLSFPATTRNSGN-KPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFEN 148
           L++LS+PAT +NS N K  FPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKV+LFVFE+
Sbjct: 62  LKVLSYPATNKNSNNSKAAFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFES 121

Query: 149 EAMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREGCFGFSC 208
           E+MK A+DR+WP EIPLGEVNKK+IRGL GCEMARFKFRKGC+TFYVYAVRR G  GFSC
Sbjct: 122 ESMKLAVDRIWPPEIPLGEVNKKLIRGLNGCEMARFKFRKGCVTFYVYAVRRVGNLGFSC 181

Query: 209 ADDLRTILESVVALKDFLDHTAMLAMPHQRTISFAAPPVAMAY 251
           ADDL+ IL+SVVAL DFLDHTAMLAMPHQR+I++A+P VAMA+
Sbjct: 182 ADDLKMILQSVVALNDFLDHTAMLAMPHQRSINYASPQVAMAH 224

[Close]

BLAST of Cp4.1LG01g23680 vs. TrEMBL
Match: M5XKJ1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010997mg PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.3e-93
Identity = 182/225 (80.89%), Postives = 200/225 (88.89%), Query Frame = 1


Query: 29  KNKSKKNKIKKQKHQHPSYQSTKSAS-DFNFKPSSDVKGLRFGGQFIVKSFTIRRARPLE 88
           K K   NK KKQKHQHP+ Q+TK+AS DF+FKPSS+VKGLRFGGQFIVKSFTIRRARPLE
Sbjct: 4   KEKKTSNKNKKQKHQHPNDQTTKTASSDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLE 63

Query: 89  LLRLLSFPATTR-NSGNKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFE 148
           LL+LLS P   + NS NK PFPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKVVLFVFE
Sbjct: 64  LLQLLSLPPPNKPNSNNKLPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFE 123

Query: 149 NEAMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREGCFGFS 208
            EAMKAA+DRVWP EIPLGEVNK++IRGL GCE+ARFKFRKGCITFYVYAVR+ G  GFS
Sbjct: 124 TEAMKAAVDRVWPPEIPLGEVNKRLIRGLNGCEIARFKFRKGCITFYVYAVRQVGSLGFS 183

Query: 209 CADDLRTILESVVALKDFLDHTAMLAMPHQRTISFA-APPVAMAY 251
            ADDLRTIL+SVVAL+DFLDHTAMLAMP+QRTIS+A   PVAMA+
Sbjct: 184 SADDLRTILQSVVALQDFLDHTAMLAMPNQRTISYANVAPVAMAH 228

[Close]

BLAST of Cp4.1LG01g23680 vs. TAIR10
Match: AT3G55420.1 (AT3G55420.1 unknown protein)

HSP 1 Score: 281.6 bits (719), Expect = 4.8e-76
Identity = 148/225 (65.78%), Postives = 177/225 (78.67%), Query Frame = 1


Query: 31  KSKKNKIKKQKHQHPSYQSTKSASDFNFKPSSDVKGLRFGGQFIVKSFTIRRARPLELLR 90
           K KK K KK+K +H S       SD +FKPSSDVKGL+FGGQ IVKSFTIRRAR  ELL+
Sbjct: 4   KEKKTKKKKKKEKHQS-------SDISFKPSSDVKGLKFGGQIIVKSFTIRRARTFELLK 63

Query: 91  LLSFPATTRNSGNKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFENEAM 150
           LLS P     S + PP  S  A++PTNFTILAHHAWHTLTLGLGT+KSKVV+FVFE EAM
Sbjct: 64  LLSLP-----SSSSPPLLSTAAYLPTNFTILAHHAWHTLTLGLGTRKSKVVVFVFETEAM 123

Query: 151 KAAI----DRVWPTEIPLGEVNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREGCFGFS 210
           K+++      +WP+EIPLG+VNKKMIR L   EMARFKFRKGCITFYVYAVR  G  GF+
Sbjct: 124 KSSVVAAEGGIWPSEIPLGDVNKKMIRKLKNWEMARFKFRKGCITFYVYAVRNAGNEGFA 183

Query: 211 CADDLRTILESVVALKDFLDHTAMLAMPHQRTISFAA-PPVAMAY 251
            A+DL+ IL++VVALKDF+DHTAML MPHQ++I++++ PP AMA+
Sbjct: 184 AAEDLKVILQAVVALKDFMDHTAMLVMPHQKSINYSSCPPFAMAH 216

[Close]

BLAST of Cp4.1LG01g23680 vs. NCBI nr
Match: gi|659117960|ref|XP_008458876.1| (PREDICTED: uncharacterized protein LOC103498150 [Cucumis melo])

HSP 1 Score: 417.2 bits (1071), Expect = 2.1e-113
Identity = 214/249 (85.94%), Postives = 227/249 (91.16%), Query Frame = 1


Query: 6   EATKPITASTEKK----EEDMDETEMNKNKSKKNKIKKQKHQHPSYQSTKSASDFNFKPS 65
           E TKPIT   +K+    E+DM+ETE  K+K      KKQKHQHP+ Q+TKSASDF+FKP 
Sbjct: 5   ETTKPITTKEKKEVHKEEQDMEETETKKSKKHN---KKQKHQHPNDQTTKSASDFSFKPC 64

Query: 66  SDVKGLRFGGQFIVKSFTIRRARPLELLRLLSFPATTRNSGNKPPFPSATAFIPTNFTIL 125
           SDVKGLRFGGQFIVKSFTIRRARPLELL+LLSFPATTRNSG+KPPFPSATAFIPTNFTIL
Sbjct: 65  SDVKGLRFGGQFIVKSFTIRRARPLELLQLLSFPATTRNSGHKPPFPSATAFIPTNFTIL 124

Query: 126 AHHAWHTLTLGLGTKKSKVVLFVFENEAMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMA 185
           AHHAWHTLTLGLGT+KSKV+LFVFENE MKAAIDRVWPTEIPLGEVNKKMIRGL GCEMA
Sbjct: 125 AHHAWHTLTLGLGTRKSKVLLFVFENETMKAAIDRVWPTEIPLGEVNKKMIRGLSGCEMA 184

Query: 186 RFKFRKGCITFYVYAVRREGCFGFSCADDLRTILESVVALKDFLDHTAMLAMPHQRTISF 245
           RFKFRKGCITFYVYAVRREGCFGFSC DDLRTILESVVALKDFLDHTAMLAMP+QRTISF
Sbjct: 185 RFKFRKGCITFYVYAVRREGCFGFSCTDDLRTILESVVALKDFLDHTAMLAMPNQRTISF 244

Query: 246 AAPPVAMAY 251
           A PPVAMAY
Sbjct: 245 AVPPVAMAY 250

[Close]

BLAST of Cp4.1LG01g23680 vs. NCBI nr
Match: gi|778703427|ref|XP_004142759.2| (PREDICTED: uncharacterized protein LOC101214484 [Cucumis sativus])

HSP 1 Score: 411.8 bits (1057), Expect = 8.8e-112
Identity = 214/247 (86.64%), Postives = 227/247 (91.90%), Query Frame = 1


Query: 6   EATKPITASTEKKEEDMDETEMNKNKSKKNKI--KKQKHQHPSYQSTKSASDFNFKPSSD 65
           E TKPIT   EKKE  ++E EM + ++KK+K   KKQKHQHP+ Q+TKS  DF+FKP SD
Sbjct: 5   ETTKPITTK-EKKEVHIEEQEMEETETKKSKKNNKKQKHQHPNDQTTKS--DFSFKPCSD 64

Query: 66  VKGLRFGGQFIVKSFTIRRARPLELLRLLSFPATTRNSGNKPPFPSATAFIPTNFTILAH 125
           VKGLRFGGQFIVKSFTIRRARPLELLRLLSFPATTRNSG+KPPFPSATAFIPTNFTILAH
Sbjct: 65  VKGLRFGGQFIVKSFTIRRARPLELLRLLSFPATTRNSGHKPPFPSATAFIPTNFTILAH 124

Query: 126 HAWHTLTLGLGTKKSKVVLFVFENEAMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMARF 185
           HAWHTLTLGLGT+KSKV+LFVFENE MKAAIDRVWPTEIPLGEVNKKMIRGL GCEMARF
Sbjct: 125 HAWHTLTLGLGTRKSKVLLFVFENETMKAAIDRVWPTEIPLGEVNKKMIRGLSGCEMARF 184

Query: 186 KFRKGCITFYVYAVRREGCFGFSCADDLRTILESVVALKDFLDHTAMLAMPHQRTISFAA 245
           KFRKGCITFYVYAVRREGCFGFSC DDLRTILESVVALKDFLDHTAMLAMP+QRTISFA 
Sbjct: 185 KFRKGCITFYVYAVRREGCFGFSCTDDLRTILESVVALKDFLDHTAMLAMPNQRTISFAV 244

Query: 246 PPVAMAY 251
           PPVAMAY
Sbjct: 245 PPVAMAY 248

[Close]

BLAST of Cp4.1LG01g23680 vs. NCBI nr
Match: gi|590563336|ref|XP_007009342.1| (Uncharacterized protein TCM_042769 [Theobroma cacao])

HSP 1 Score: 361.7 bits (927), Expect = 1.0e-96
Identity = 179/222 (80.63%), Postives = 201/222 (90.54%), Query Frame = 1


Query: 29  KNKSKKNKIKKQKHQHPSYQSTKSASDFNFKPSSDVKGLRFGGQFIVKSFTIRRARPLEL 88
           + K K  K KKQKHQHP+ Q+TK ASDF+FKPSS+VKGLRFGGQFIVKSFTIRRARPLEL
Sbjct: 2   EEKEKNKKNKKQKHQHPNDQTTKPASDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLEL 61

Query: 89  LRLLSFPATTRNSGNKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFENE 148
           L+LL FP  ++++ NK PFPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKV+LFVFE+E
Sbjct: 62  LKLLDFPPISKSNSNKLPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFESE 121

Query: 149 AMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREGCFGFSCA 208
           AMK A+DR+WP EIPLGEVNKK+IRGL GCEMARFKFRKGCITFYVYAVR+ G  GFSCA
Sbjct: 122 AMKLAVDRIWPPEIPLGEVNKKLIRGLTGCEMARFKFRKGCITFYVYAVRKVGNMGFSCA 181

Query: 209 DDLRTILESVVALKDFLDHTAMLAMPHQRTISFAAPPVAMAY 251
           DDLRTIL+SVVALKDFLDHTAMLAMP+QR+IS+  PPVAMA+
Sbjct: 182 DDLRTILQSVVALKDFLDHTAMLAMPNQRSISY-CPPVAMAH 222

[Close]

BLAST of Cp4.1LG01g23680 vs. NCBI nr
Match: gi|743780407|ref|XP_011029486.1| (PREDICTED: uncharacterized protein LOC105129188 [Populus euphratica])

HSP 1 Score: 359.8 bits (922), Expect = 4.0e-96
Identity = 177/223 (79.37%), Postives = 202/223 (90.58%), Query Frame = 1


Query: 29  KNKSKKNKIKKQKHQHPSYQSTKSASDFNFKPSSDVKGLRFGGQFIVKSFTIRRARPLEL 88
           ++K KK   KKQKHQHP+ Q+TK +SDF+FKPSS+VKGLRFGGQFIVKSFTIRRARPLEL
Sbjct: 2   EDKEKKKHHKKQKHQHPNDQTTKPSSDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLEL 61

Query: 89  LRLLSFPATTRNS-GNKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFEN 148
           L++LS+P T +NS  NK PFPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKV+LFVFE+
Sbjct: 62  LKVLSYPPTNKNSDNNKTPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFES 121

Query: 149 EAMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREGCFGFSC 208
           E+MK A+DR+WP EIPLGEVNKK+IRGL GCEMARFKFRKGCITFYVYAVRR G  GFSC
Sbjct: 122 ESMKMAVDRIWPPEIPLGEVNKKLIRGLNGCEMARFKFRKGCITFYVYAVRRVGNMGFSC 181

Query: 209 ADDLRTILESVVALKDFLDHTAMLAMPHQRTISFAAPPVAMAY 251
           ADDL+ IL+SVVAL DFLDHTAMLAMPHQR+I++A+P VAMA+
Sbjct: 182 ADDLKIILQSVVALNDFLDHTAMLAMPHQRSINYASPQVAMAH 224

[Close]

BLAST of Cp4.1LG01g23680 vs. NCBI nr
Match: gi|224100987|ref|XP_002312096.1| (hypothetical protein POPTR_0008s05590g [Populus trichocarpa])

HSP 1 Score: 358.6 bits (919), Expect = 8.8e-96
Identity = 176/223 (78.92%), Postives = 202/223 (90.58%), Query Frame = 1


Query: 29  KNKSKKNKIKKQKHQHPSYQSTKSASDFNFKPSSDVKGLRFGGQFIVKSFTIRRARPLEL 88
           ++K KK   KKQKHQHP+ Q+TK +SDF+FKPSS+VKGLRFGGQFIVKSFTIRRARPLEL
Sbjct: 2   EDKEKKKHHKKQKHQHPNDQTTKPSSDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLEL 61

Query: 89  LRLLSFPATTRNS-GNKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFEN 148
           L++LS+P T +NS  NK PFPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKV+LFVFE+
Sbjct: 62  LKVLSYPPTNKNSDNNKTPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFES 121

Query: 149 EAMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREGCFGFSC 208
           E+M+ A+DR+WP EIPLGEVNKK+IRGL GCEMARFKFRKGCITFYVYAVRR G  GFSC
Sbjct: 122 ESMRLAVDRIWPPEIPLGEVNKKLIRGLNGCEMARFKFRKGCITFYVYAVRRVGNMGFSC 181

Query: 209 ADDLRTILESVVALKDFLDHTAMLAMPHQRTISFAAPPVAMAY 251
           ADDL+ IL+SVVAL DFLDHTAMLAMPHQR+I++A+P VAMA+
Sbjct: 182 ADDLKIILQSVVALNDFLDHTAMLAMPHQRSINYASPQVAMAH 224

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g23680 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g23680 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNW4_CUCSA	6.1e-112	86.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517120 PE=4 SV=1	[more]
A0A061FNF3_THECC	7.2e-97	80.63	Uncharacterized protein OS=Theobroma cacao GN=TCM_042769 PE=4 SV=1	[more]
B9HMH8_POPTR	6.1e-96	78.92	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s05590g PE=4 SV=1	[more]
B9HTI8_POPTR	1.8e-95	78.48	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s21140g PE=4 SV=2	[more]
M5XKJ1_PRUPE	1.3e-93	80.89	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010997mg PE=4 SV=1	[more]

BLAST of Cp4.1LG01g23680 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G55420.1	4.8e-76	65.78	unknown protein	[more]

BLAST of Cp4.1LG01g23680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659117960\|ref\|XP_008458876.1\|	2.1e-113	85.94	PREDICTED: uncharacterized protein LOC103498150 [Cucumis melo]	[more]
gi\|778703427\|ref\|XP_004142759.2\|	8.8e-112	86.64	PREDICTED: uncharacterized protein LOC101214484 [Cucumis sativus]	[more]
gi\|590563336\|ref\|XP_007009342.1\|	1.0e-96	80.63	Uncharacterized protein TCM_042769 [Theobroma cacao]	[more]
gi\|743780407\|ref\|XP_011029486.1\|	4.0e-96	79.37	PREDICTED: uncharacterized protein LOC105129188 [Populus euphratica]	[more]
gi\|224100987\|ref\|XP_002312096.1\|	8.8e-96	78.92	hypothetical protein POPTR_0008s05590g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006949	syncytium formation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g23680.1	Cp4.1LG01g23680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 15..35 scor
None	No IPR available	PANTHER	PTHR36375	FAMILY NOT NAMED	coord: 26..249 score: 1.2E
None	No IPR available	PANTHER	PTHR36375:SF1	SUBFAMILY NOT NAMED	coord: 26..249 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g23680	Cucsa.010830	Cucumber (Gy14) v1	cgycpeB0522
Cp4.1LG01g23680	CmaCh15G003850	Cucurbita maxima (Rimu)	cmacpeB317
Cp4.1LG01g23680	CmaCh04G026470	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g23680	CmoCh04G027680	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g23680	CmoCh15G003960	Cucurbita moschata (Rifu)	cmocpeB279
Cp4.1LG01g23680	Cla004661	Watermelon (97103) v1	cpewmB381
Cp4.1LG01g23680	Csa5G517120	Cucumber (Chinese Long) v2	cpecuB417
Cp4.1LG01g23680	MELO3C021630	Melon (DHL92) v3.5.1	cpemeB358
Cp4.1LG01g23680	ClCG09G019730	Watermelon (Charleston Gray)	cpewcgB344
Cp4.1LG01g23680	CSPI05G17750	Wild cucumber (PI 183967)	cpecpiB416
Cp4.1LG01g23680	Lsi02G016310	Bottle gourd (USVL1VR-Ls)	cpelsiB336
Cp4.1LG01g23680	MELO3C021630.2	Melon (DHL92) v3.6.1	cpemedB418
Cp4.1LG01g23680	CsaV3_5G026670	Cucumber (Chinese Long) v3	cpecucB0519
Cp4.1LG01g23680	CsGy5G017410	Cucumber (Gy14) v2	cgybcpeB627
Cp4.1LG01g23680	Carg02347	Silver-seed gourd	carcpeB0374
Cp4.1LG01g23680	Carg04498	Silver-seed gourd	carcpeB0965

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g23680	Cp4.1LG13g09300	Cucurbita pepo (Zucchini)	cpecpeB199

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g23680	Wax gourd	cpewgoB0502
Cp4.1LG01g23680	Wax gourd	cpewgoB0541
Cp4.1LG01g23680	Cucurbita pepo (Zucchini)	cpecpeB384
Cp4.1LG01g23680	Cucumber (Chinese Long) v3	cpecucB0502