CmoCh04G027680 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G027680
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	BnaA09g34990D protein
Location	Cmo_Chr04 : 20002948 .. 20003637 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGAAACAGAGATGAACAAGAACAAGAGCAAGAAGAACAAGATCAAGAAGCAAAAACACCAACACCCAAGTGACCAATCCACAAAATCAGCTTCTGATTTCAATTTCAAGCCAAGCTCTGATGTAAAGGGCCTCAGATTCGGCGGTCAGTTCATCGTTAAATCCTTCACAATCCGGCGAGCTAGGCCTTTAGAGCTCCTCCGCCTCCTCTCTTTTCCGGCCACCACCAGAAACTCCGGCAACAAACCGCCGTTCCCATCGGCCACAGCTTTCATTCCCACAAACTTCACAATCCTCGCTCACCATGCCTGGCACACCCTCACTCTAGGCCTTGGCACCAAGAAGTCCAAAGTTGTTCTCTTTGTGTTTGAAAATGAGGCCATGAAAGCAGCTATAGACCGTGTTTGGCCAACAGAAATCCCTCTTGGCGAAGTGAACAAGAAGATGATCAGAGGGCTATGTGGGTGCGAGATGGCTCGGTTCAAATTTAGAAAAGGGTGCATAACTTTTTATGTTTATGCAGTTCGAAGAGAAGGGTGTTTTGGGTTTTCTTGTGCTGATGATTTGAGAACCATTTTGGAATCCGTTGTTGCTCTCAAAGATTTATTGGATCATACTGCTATGTTGGCTATGCCTCATCAGAGAACCATCAGCTTTGCTGCGCCTCCTGTTGCAATGGCTTATTAG

mRNA sequence

ATGGACGAAACAGAGATGAACAAGAACAAGAGCAAGAAGAACAAGATCAAGAAGCAAAAACACCAACACCCAAGTGACCAATCCACAAAATCAGCTTCTGATTTCAATTTCAAGCCAAGCTCTGATGTAAAGGGCCTCAGATTCGGCGGTCAGTTCATCGTTAAATCCTTCACAATCCGGCGAGCTAGGCCTTTAGAGCTCCTCCGCCTCCTCTCTTTTCCGGCCACCACCAGAAACTCCGGCAACAAACCGCCGTTCCCATCGGCCACAGCTTTCATTCCCACAAACTTCACAATCCTCGCTCACCATGCCTGGCACACCCTCACTCTAGGCCTTGGCACCAAGAAGTCCAAAGTTGTTCTCTTTGTGTTTGAAAATGAGGCCATGAAAGCAGCTATAGACCGTGTTTGGCCAACAGAAATCCCTCTTGGCGAAGTGAACAAGAAGATGATCAGAGGGCTATGTGGGTGCGAGATGGCTCGGTTCAAATTTAGAAAAGGGTGCATAACTTTTTATGTTTATGCAGTTCGAAGAGAAGGGTGTTTTGGGTTTTCTTGTGCTGATGATTTGAGAACCATTTTGGAATCCGTTGTTGCTCTCAAAGATTTATTGGATCATACTGCTATGTTGGCTATGCCTCATCAGAGAACCATCAGCTTTGCTGCGCCTCCTGTTGCAATGGCTTATTAG

Coding sequence (CDS)

ATGGACGAAACAGAGATGAACAAGAACAAGAGCAAGAAGAACAAGATCAAGAAGCAAAAACACCAACACCCAAGTGACCAATCCACAAAATCAGCTTCTGATTTCAATTTCAAGCCAAGCTCTGATGTAAAGGGCCTCAGATTCGGCGGTCAGTTCATCGTTAAATCCTTCACAATCCGGCGAGCTAGGCCTTTAGAGCTCCTCCGCCTCCTCTCTTTTCCGGCCACCACCAGAAACTCCGGCAACAAACCGCCGTTCCCATCGGCCACAGCTTTCATTCCCACAAACTTCACAATCCTCGCTCACCATGCCTGGCACACCCTCACTCTAGGCCTTGGCACCAAGAAGTCCAAAGTTGTTCTCTTTGTGTTTGAAAATGAGGCCATGAAAGCAGCTATAGACCGTGTTTGGCCAACAGAAATCCCTCTTGGCGAAGTGAACAAGAAGATGATCAGAGGGCTATGTGGGTGCGAGATGGCTCGGTTCAAATTTAGAAAAGGGTGCATAACTTTTTATGTTTATGCAGTTCGAAGAGAAGGGTGTTTTGGGTTTTCTTGTGCTGATGATTTGAGAACCATTTTGGAATCCGTTGTTGCTCTCAAAGATTTATTGGATCATACTGCTATGTTGGCTATGCCTCATCAGAGAACCATCAGCTTTGCTGCGCCTCCTGTTGCAATGGCTTATTAG

Homology

[Close]

BLAST of CmoCh04G027680 vs. TrEMBL
Match: A0A0A0KNW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517120 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 1.5e-109
Identity = 207/229 (90.39%), Postives = 215/229 (93.89%), Query Frame = 1


Query: 1   MDETEMNKNKSKKNKIKKQKHQHPSDQSTKSASDFNFKPSSDVKGLRFGGQFIVKSFTIR 60
           M+ETE  K  SKKN  KKQKHQHP+DQ+TKS  DF+FKP SDVKGLRFGGQFIVKSFTIR
Sbjct: 25  MEETETKK--SKKNN-KKQKHQHPNDQTTKS--DFSFKPCSDVKGLRFGGQFIVKSFTIR 84

Query: 61  RARPLELLRLLSFPATTRNSGNKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVV 120
           RARPLELLRLLSFPATTRNSG+KPPFPSATAFIPTNFTILAHHAWHTLTLGLGT+KSKV+
Sbjct: 85  RARPLELLRLLSFPATTRNSGHKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTRKSKVL 144

Query: 121 LFVFENEAMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREG 180
           LFVFENE MKAAIDRVWPTEIPLGEVNKKMIRGL GCEMARFKFRKGCITFYVYAVRREG
Sbjct: 145 LFVFENETMKAAIDRVWPTEIPLGEVNKKMIRGLSGCEMARFKFRKGCITFYVYAVRREG 204

Query: 181 CFGFSCADDLRTILESVVALKDLLDHTAMLAMPHQRTISFAAPPVAMAY 230
           CFGFSC DDLRTILESVVALKD LDHTAMLAMP+QRTISFA PPVAMAY
Sbjct: 205 CFGFSCTDDLRTILESVVALKDFLDHTAMLAMPNQRTISFAVPPVAMAY 248

[Close]

BLAST of CmoCh04G027680 vs. TrEMBL
Match: A0A061FNF3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_042769 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 6.6e-97
Identity = 179/222 (80.63%), Postives = 201/222 (90.54%), Query Frame = 1


Query: 8   KNKSKKNKIKKQKHQHPSDQSTKSASDFNFKPSSDVKGLRFGGQFIVKSFTIRRARPLEL 67
           + K K  K KKQKHQHP+DQ+TK ASDF+FKPSS+VKGLRFGGQFIVKSFTIRRARPLEL
Sbjct: 2   EEKEKNKKNKKQKHQHPNDQTTKPASDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLEL 61

Query: 68  LRLLSFPATTRNSGNKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFENE 127
           L+LL FP  ++++ NK PFPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKV+LFVFE+E
Sbjct: 62  LKLLDFPPISKSNSNKLPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFESE 121

Query: 128 AMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREGCFGFSCA 187
           AMK A+DR+WP EIPLGEVNKK+IRGL GCEMARFKFRKGCITFYVYAVR+ G  GFSCA
Sbjct: 122 AMKLAVDRIWPPEIPLGEVNKKLIRGLTGCEMARFKFRKGCITFYVYAVRKVGNMGFSCA 181

Query: 188 DDLRTILESVVALKDLLDHTAMLAMPHQRTISFAAPPVAMAY 230
           DDLRTIL+SVVALKD LDHTAMLAMP+QR+IS+  PPVAMA+
Sbjct: 182 DDLRTILQSVVALKDFLDHTAMLAMPNQRSISY-CPPVAMAH 222

[Close]

BLAST of CmoCh04G027680 vs. TrEMBL
Match: B9HMH8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s05590g PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 5.6e-96
Identity = 176/223 (78.92%), Postives = 202/223 (90.58%), Query Frame = 1


Query: 8   KNKSKKNKIKKQKHQHPSDQSTKSASDFNFKPSSDVKGLRFGGQFIVKSFTIRRARPLEL 67
           ++K KK   KKQKHQHP+DQ+TK +SDF+FKPSS+VKGLRFGGQFIVKSFTIRRARPLEL
Sbjct: 2   EDKEKKKHHKKQKHQHPNDQTTKPSSDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLEL 61

Query: 68  LRLLSFPATTRNS-GNKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFEN 127
           L++LS+P T +NS  NK PFPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKV+LFVFE+
Sbjct: 62  LKVLSYPPTNKNSDNNKTPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFES 121

Query: 128 EAMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREGCFGFSC 187
           E+M+ A+DR+WP EIPLGEVNKK+IRGL GCEMARFKFRKGCITFYVYAVRR G  GFSC
Sbjct: 122 ESMRLAVDRIWPPEIPLGEVNKKLIRGLNGCEMARFKFRKGCITFYVYAVRRVGNMGFSC 181

Query: 188 ADDLRTILESVVALKDLLDHTAMLAMPHQRTISFAAPPVAMAY 230
           ADDL+ IL+SVVAL D LDHTAMLAMPHQR+I++A+P VAMA+
Sbjct: 182 ADDLKIILQSVVALNDFLDHTAMLAMPHQRSINYASPQVAMAH 224

[Close]

BLAST of CmoCh04G027680 vs. TrEMBL
Match: B9HTI8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s21140g PE=4 SV=2)

HSP 1 Score: 354.0 bits (907), Expect = 1.4e-94
Identity = 174/223 (78.03%), Postives = 200/223 (89.69%), Query Frame = 1


Query: 8   KNKSKKNKIKKQKHQHPSDQSTKSASDFNFKPSSDVKGLRFGGQFIVKSFTIRRARPLEL 67
           + K KK   KKQKHQHP+ Q++K +SDF+FKPSS+VKGLRFGGQFIVKSFTIRRARPLEL
Sbjct: 2   EEKEKKKHNKKQKHQHPNQQTSKPSSDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLEL 61

Query: 68  LRLLSFPATTRNSGN-KPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFEN 127
           L++LS+PAT +NS N K  FPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKV+LFVFE+
Sbjct: 62  LKVLSYPATNKNSNNSKAAFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFES 121

Query: 128 EAMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREGCFGFSC 187
           E+MK A+DR+WP EIPLGEVNKK+IRGL GCEMARFKFRKGC+TFYVYAVRR G  GFSC
Sbjct: 122 ESMKLAVDRIWPPEIPLGEVNKKLIRGLNGCEMARFKFRKGCVTFYVYAVRRVGNLGFSC 181

Query: 188 ADDLRTILESVVALKDLLDHTAMLAMPHQRTISFAAPPVAMAY 230
           ADDL+ IL+SVVAL D LDHTAMLAMPHQR+I++A+P VAMA+
Sbjct: 182 ADDLKMILQSVVALNDFLDHTAMLAMPHQRSINYASPQVAMAH 224

[Close]

BLAST of CmoCh04G027680 vs. TrEMBL
Match: M5XKJ1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010997mg PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.2e-93
Identity = 182/225 (80.89%), Postives = 200/225 (88.89%), Query Frame = 1


Query: 8   KNKSKKNKIKKQKHQHPSDQSTKSAS-DFNFKPSSDVKGLRFGGQFIVKSFTIRRARPLE 67
           K K   NK KKQKHQHP+DQ+TK+AS DF+FKPSS+VKGLRFGGQFIVKSFTIRRARPLE
Sbjct: 4   KEKKTSNKNKKQKHQHPNDQTTKTASSDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLE 63

Query: 68  LLRLLSFPATTR-NSGNKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFE 127
           LL+LLS P   + NS NK PFPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKVVLFVFE
Sbjct: 64  LLQLLSLPPPNKPNSNNKLPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFE 123

Query: 128 NEAMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREGCFGFS 187
            EAMKAA+DRVWP EIPLGEVNK++IRGL GCE+ARFKFRKGCITFYVYAVR+ G  GFS
Sbjct: 124 TEAMKAAVDRVWPPEIPLGEVNKRLIRGLNGCEIARFKFRKGCITFYVYAVRQVGSLGFS 183

Query: 188 CADDLRTILESVVALKDLLDHTAMLAMPHQRTISFA-APPVAMAY 230
            ADDLRTIL+SVVAL+D LDHTAMLAMP+QRTIS+A   PVAMA+
Sbjct: 184 SADDLRTILQSVVALQDFLDHTAMLAMPNQRTISYANVAPVAMAH 228

[Close]

BLAST of CmoCh04G027680 vs. TAIR10
Match: AT3G55420.1 (AT3G55420.1 unknown protein)

HSP 1 Score: 278.5 bits (711), Expect = 3.7e-75
Identity = 147/225 (65.33%), Postives = 176/225 (78.22%), Query Frame = 1


Query: 10  KSKKNKIKKQKHQHPSDQSTKSASDFNFKPSSDVKGLRFGGQFIVKSFTIRRARPLELLR 69
           K KK K KK+K +H S       SD +FKPSSDVKGL+FGGQ IVKSFTIRRAR  ELL+
Sbjct: 4   KEKKTKKKKKKEKHQS-------SDISFKPSSDVKGLKFGGQIIVKSFTIRRARTFELLK 63

Query: 70  LLSFPATTRNSGNKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFENEAM 129
           LLS P     S + PP  S  A++PTNFTILAHHAWHTLTLGLGT+KSKVV+FVFE EAM
Sbjct: 64  LLSLP-----SSSSPPLLSTAAYLPTNFTILAHHAWHTLTLGLGTRKSKVVVFVFETEAM 123

Query: 130 KAAI----DRVWPTEIPLGEVNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREGCFGFS 189
           K+++      +WP+EIPLG+VNKKMIR L   EMARFKFRKGCITFYVYAVR  G  GF+
Sbjct: 124 KSSVVAAEGGIWPSEIPLGDVNKKMIRKLKNWEMARFKFRKGCITFYVYAVRNAGNEGFA 183

Query: 190 CADDLRTILESVVALKDLLDHTAMLAMPHQRTISFAA-PPVAMAY 230
            A+DL+ IL++VVALKD +DHTAML MPHQ++I++++ PP AMA+
Sbjct: 184 AAEDLKVILQAVVALKDFMDHTAMLVMPHQKSINYSSCPPFAMAH 216

[Close]

BLAST of CmoCh04G027680 vs. NCBI nr
Match: gi|659117960|ref|XP_008458876.1| (PREDICTED: uncharacterized protein LOC103498150 [Cucumis melo])

HSP 1 Score: 408.3 bits (1048), Expect = 8.9e-111
Identity = 205/229 (89.52%), Postives = 215/229 (93.89%), Query Frame = 1


Query: 1   MDETEMNKNKSKKNKIKKQKHQHPSDQSTKSASDFNFKPSSDVKGLRFGGQFIVKSFTIR 60
           M+ETE  K+K      KKQKHQHP+DQ+TKSASDF+FKP SDVKGLRFGGQFIVKSFTIR
Sbjct: 25  MEETETKKSKKHN---KKQKHQHPNDQTTKSASDFSFKPCSDVKGLRFGGQFIVKSFTIR 84

Query: 61  RARPLELLRLLSFPATTRNSGNKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVV 120
           RARPLELL+LLSFPATTRNSG+KPPFPSATAFIPTNFTILAHHAWHTLTLGLGT+KSKV+
Sbjct: 85  RARPLELLQLLSFPATTRNSGHKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTRKSKVL 144

Query: 121 LFVFENEAMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREG 180
           LFVFENE MKAAIDRVWPTEIPLGEVNKKMIRGL GCEMARFKFRKGCITFYVYAVRREG
Sbjct: 145 LFVFENETMKAAIDRVWPTEIPLGEVNKKMIRGLSGCEMARFKFRKGCITFYVYAVRREG 204

Query: 181 CFGFSCADDLRTILESVVALKDLLDHTAMLAMPHQRTISFAAPPVAMAY 230
           CFGFSC DDLRTILESVVALKD LDHTAMLAMP+QRTISFA PPVAMAY
Sbjct: 205 CFGFSCTDDLRTILESVVALKDFLDHTAMLAMPNQRTISFAVPPVAMAY 250

[Close]

BLAST of CmoCh04G027680 vs. NCBI nr
Match: gi|778703427|ref|XP_004142759.2| (PREDICTED: uncharacterized protein LOC101214484 [Cucumis sativus])

HSP 1 Score: 403.7 bits (1036), Expect = 2.2e-109
Identity = 207/229 (90.39%), Postives = 215/229 (93.89%), Query Frame = 1


Query: 1   MDETEMNKNKSKKNKIKKQKHQHPSDQSTKSASDFNFKPSSDVKGLRFGGQFIVKSFTIR 60
           M+ETE  K  SKKN  KKQKHQHP+DQ+TKS  DF+FKP SDVKGLRFGGQFIVKSFTIR
Sbjct: 25  MEETETKK--SKKNN-KKQKHQHPNDQTTKS--DFSFKPCSDVKGLRFGGQFIVKSFTIR 84

Query: 61  RARPLELLRLLSFPATTRNSGNKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVV 120
           RARPLELLRLLSFPATTRNSG+KPPFPSATAFIPTNFTILAHHAWHTLTLGLGT+KSKV+
Sbjct: 85  RARPLELLRLLSFPATTRNSGHKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTRKSKVL 144

Query: 121 LFVFENEAMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREG 180
           LFVFENE MKAAIDRVWPTEIPLGEVNKKMIRGL GCEMARFKFRKGCITFYVYAVRREG
Sbjct: 145 LFVFENETMKAAIDRVWPTEIPLGEVNKKMIRGLSGCEMARFKFRKGCITFYVYAVRREG 204

Query: 181 CFGFSCADDLRTILESVVALKDLLDHTAMLAMPHQRTISFAAPPVAMAY 230
           CFGFSC DDLRTILESVVALKD LDHTAMLAMP+QRTISFA PPVAMAY
Sbjct: 205 CFGFSCTDDLRTILESVVALKDFLDHTAMLAMPNQRTISFAVPPVAMAY 248

[Close]

BLAST of CmoCh04G027680 vs. NCBI nr
Match: gi|590563336|ref|XP_007009342.1| (Uncharacterized protein TCM_042769 [Theobroma cacao])

HSP 1 Score: 361.7 bits (927), Expect = 9.5e-97
Identity = 179/222 (80.63%), Postives = 201/222 (90.54%), Query Frame = 1


Query: 8   KNKSKKNKIKKQKHQHPSDQSTKSASDFNFKPSSDVKGLRFGGQFIVKSFTIRRARPLEL 67
           + K K  K KKQKHQHP+DQ+TK ASDF+FKPSS+VKGLRFGGQFIVKSFTIRRARPLEL
Sbjct: 2   EEKEKNKKNKKQKHQHPNDQTTKPASDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLEL 61

Query: 68  LRLLSFPATTRNSGNKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFENE 127
           L+LL FP  ++++ NK PFPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKV+LFVFE+E
Sbjct: 62  LKLLDFPPISKSNSNKLPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFESE 121

Query: 128 AMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREGCFGFSCA 187
           AMK A+DR+WP EIPLGEVNKK+IRGL GCEMARFKFRKGCITFYVYAVR+ G  GFSCA
Sbjct: 122 AMKLAVDRIWPPEIPLGEVNKKLIRGLTGCEMARFKFRKGCITFYVYAVRKVGNMGFSCA 181

Query: 188 DDLRTILESVVALKDLLDHTAMLAMPHQRTISFAAPPVAMAY 230
           DDLRTIL+SVVALKD LDHTAMLAMP+QR+IS+  PPVAMA+
Sbjct: 182 DDLRTILQSVVALKDFLDHTAMLAMPNQRSISY-CPPVAMAH 222

[Close]

BLAST of CmoCh04G027680 vs. NCBI nr
Match: gi|743780407|ref|XP_011029486.1| (PREDICTED: uncharacterized protein LOC105129188 [Populus euphratica])

HSP 1 Score: 359.8 bits (922), Expect = 3.6e-96
Identity = 177/223 (79.37%), Postives = 202/223 (90.58%), Query Frame = 1


Query: 8   KNKSKKNKIKKQKHQHPSDQSTKSASDFNFKPSSDVKGLRFGGQFIVKSFTIRRARPLEL 67
           ++K KK   KKQKHQHP+DQ+TK +SDF+FKPSS+VKGLRFGGQFIVKSFTIRRARPLEL
Sbjct: 2   EDKEKKKHHKKQKHQHPNDQTTKPSSDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLEL 61

Query: 68  LRLLSFPATTRNS-GNKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFEN 127
           L++LS+P T +NS  NK PFPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKV+LFVFE+
Sbjct: 62  LKVLSYPPTNKNSDNNKTPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFES 121

Query: 128 EAMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREGCFGFSC 187
           E+MK A+DR+WP EIPLGEVNKK+IRGL GCEMARFKFRKGCITFYVYAVRR G  GFSC
Sbjct: 122 ESMKMAVDRIWPPEIPLGEVNKKLIRGLNGCEMARFKFRKGCITFYVYAVRRVGNMGFSC 181

Query: 188 ADDLRTILESVVALKDLLDHTAMLAMPHQRTISFAAPPVAMAY 230
           ADDL+ IL+SVVAL D LDHTAMLAMPHQR+I++A+P VAMA+
Sbjct: 182 ADDLKIILQSVVALNDFLDHTAMLAMPHQRSINYASPQVAMAH 224

[Close]

BLAST of CmoCh04G027680 vs. NCBI nr
Match: gi|224100987|ref|XP_002312096.1| (hypothetical protein POPTR_0008s05590g [Populus trichocarpa])

HSP 1 Score: 358.6 bits (919), Expect = 8.1e-96
Identity = 176/223 (78.92%), Postives = 202/223 (90.58%), Query Frame = 1


Query: 8   KNKSKKNKIKKQKHQHPSDQSTKSASDFNFKPSSDVKGLRFGGQFIVKSFTIRRARPLEL 67
           ++K KK   KKQKHQHP+DQ+TK +SDF+FKPSS+VKGLRFGGQFIVKSFTIRRARPLEL
Sbjct: 2   EDKEKKKHHKKQKHQHPNDQTTKPSSDFSFKPSSEVKGLRFGGQFIVKSFTIRRARPLEL 61

Query: 68  LRLLSFPATTRNS-GNKPPFPSATAFIPTNFTILAHHAWHTLTLGLGTKKSKVVLFVFEN 127
           L++LS+P T +NS  NK PFPS TAF+PTNFTILAHHAWHTLTLGLGTKKSKV+LFVFE+
Sbjct: 62  LKVLSYPPTNKNSDNNKTPFPSTTAFLPTNFTILAHHAWHTLTLGLGTKKSKVLLFVFES 121

Query: 128 EAMKAAIDRVWPTEIPLGEVNKKMIRGLCGCEMARFKFRKGCITFYVYAVRREGCFGFSC 187
           E+M+ A+DR+WP EIPLGEVNKK+IRGL GCEMARFKFRKGCITFYVYAVRR G  GFSC
Sbjct: 122 ESMRLAVDRIWPPEIPLGEVNKKLIRGLNGCEMARFKFRKGCITFYVYAVRRVGNMGFSC 181

Query: 188 ADDLRTILESVVALKDLLDHTAMLAMPHQRTISFAAPPVAMAY 230
           ADDL+ IL+SVVAL D LDHTAMLAMPHQR+I++A+P VAMA+
Sbjct: 182 ADDLKIILQSVVALNDFLDHTAMLAMPHQRSINYASPQVAMAH 224

The following BLAST results are available for this feature:

BLAST of CmoCh04G027680 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G027680 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNW4_CUCSA	1.5e-109	90.39	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517120 PE=4 SV=1	[more]
A0A061FNF3_THECC	6.6e-97	80.63	Uncharacterized protein OS=Theobroma cacao GN=TCM_042769 PE=4 SV=1	[more]
B9HMH8_POPTR	5.6e-96	78.92	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s05590g PE=4 SV=1	[more]
B9HTI8_POPTR	1.4e-94	78.03	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s21140g PE=4 SV=2	[more]
M5XKJ1_PRUPE	1.2e-93	80.89	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010997mg PE=4 SV=1	[more]

BLAST of CmoCh04G027680 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G55420.1	3.7e-75	65.33	unknown protein	[more]

BLAST of CmoCh04G027680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659117960\|ref\|XP_008458876.1\|	8.9e-111	89.52	PREDICTED: uncharacterized protein LOC103498150 [Cucumis melo]	[more]
gi\|778703427\|ref\|XP_004142759.2\|	2.2e-109	90.39	PREDICTED: uncharacterized protein LOC101214484 [Cucumis sativus]	[more]
gi\|590563336\|ref\|XP_007009342.1\|	9.5e-97	80.63	Uncharacterized protein TCM_042769 [Theobroma cacao]	[more]
gi\|743780407\|ref\|XP_011029486.1\|	3.6e-96	79.37	PREDICTED: uncharacterized protein LOC105129188 [Populus euphratica]	[more]
gi\|224100987\|ref\|XP_002312096.1\|	8.1e-96	78.92	hypothetical protein POPTR_0008s05590g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006949	syncytium formation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G027680.1	CmoCh04G027680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36375	FAMILY NOT NAMED	coord: 5..228 score: 2.9E
None	No IPR available	PANTHER	PTHR36375:SF1	SUBFAMILY NOT NAMED	coord: 5..228 score: 2.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G027680	Cucsa.010830	Cucumber (Gy14) v1	cgycmoB0544
CmoCh04G027680	CmaCh15G003850	Cucurbita maxima (Rimu)	cmacmoB308
CmoCh04G027680	CmaCh04G026470	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G027680	Cla004661	Watermelon (97103) v1	cmowmB646
CmoCh04G027680	Csa5G517120	Cucumber (Chinese Long) v2	cmocuB716
CmoCh04G027680	MELO3C021630	Melon (DHL92) v3.5.1	cmomeB624
CmoCh04G027680	ClCG09G019730	Watermelon (Charleston Gray)	cmowcgB608
CmoCh04G027680	CSPI05G17750	Wild cucumber (PI 183967)	cmocpiB724
CmoCh04G027680	Lsi02G016310	Bottle gourd (USVL1VR-Ls)	cmolsiB640
CmoCh04G027680	Cp4.1LG13g09300	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G027680	Cp4.1LG01g23680	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G027680	MELO3C021630.2	Melon (DHL92) v3.6.1	cmomedB713
CmoCh04G027680	CsaV3_5G026670	Cucumber (Chinese Long) v3	cmocucB0848
CmoCh04G027680	Cla97C09G181180	Watermelon (97103) v2	cmowmbB772
CmoCh04G027680	CsGy5G017410	Cucumber (Gy14) v2	cgybcmoB626
CmoCh04G027680	Carg04498	Silver-seed gourd	carcmoB0940
CmoCh04G027680	Carg02347	Silver-seed gourd	carcmoB0370

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G027680	CmoCh15G003960	Cucurbita moschata (Rifu)	cmocmoB261

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G027680	Cucurbita moschata (Rifu)	cmocmoB476
CmoCh04G027680	Bottle gourd (USVL1VR-Ls)	cmolsiB626
CmoCh04G027680	Bottle gourd (USVL1VR-Ls)	cmolsiB667
CmoCh04G027680	Cucumber (Gy14) v2	cgybcmoB520
CmoCh04G027680	Cucumber (Gy14) v2	cgybcmoB648
CmoCh04G027680	Melon (DHL92) v3.6.1	cmomedB730
CmoCh04G027680	Melon (DHL92) v3.6.1	cmomedB796
CmoCh04G027680	Cucumber (Chinese Long) v3	cmocucB0869
CmoCh04G027680	Cucumber (Chinese Long) v3	cmocucB0832
CmoCh04G027680	Watermelon (97103) v2	cmowmbB728
CmoCh04G027680	Wax gourd	cmowgoB0836
CmoCh04G027680	Wax gourd	cmowgoB0874