CmoCh13G003690 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGCAGCTGCTCGAAGTTGCAGCATCTCCGTCGAAAGTAAGTAAACCAAGTTATCATTTGTTAAGACGTATATAGGCAGATTTCTTTCCCAGCTGTTGTTTTCGGAAACTTCTGGATAGGGATATCACGTCTGAACGGAATTCTTTTTGGTTAAAGAATCCCTTTCAAGTTGCTCCGGAACAATTAAGAGATCTTCTAGAAGGCCGTTTAGGCCTTGAATCCTGTCCTGGACTTTCCATCGGTGGTCTGACCTTGCTGAAAGATAGGTCATGGGTGCAAATGAGCGATCTATTTTTGAGTCTTGAAGCAATATTTCCCTTAAATGCATATCCAGCTTATTGTGAACATCTCATTTTTCTCTTGAAACAAATCCTTATTAACCTCGATTTCTTATCTTTTCTTTTCTGAACCTATTCTATTGGTCATGCTGAATTTGACATCCCTTATCTCTTAAAGCAACAAGAAAGGAGTAGGATGCACGAACCTCCTAACATGTTTTATTGTTGCATTAAATGATGGGCGGTTGGTTGCGTGTAGAGGGAATGTCATTTTGAAACATGTGATTTAGATGTCAAGACATTGGACATATAAATTCTTGCCTAGCACGCCAAATGGCATAATAATTGGTGTAATAAAGTAGGGAGCAAATCATTTAAAGCAAATCTTTCTATCTTATCATCAGCATAGGAAATGATTCTAATGATTCTGTTCTTTGTTAGAACCCGAAAATTGAACAAAGCTCCTCAACGAACTCATACCATAAACACTCACTCAATTGCTTATTAACATACCTAACCAACTTTGTTTTGATGAGGAATGCTTACACGCATCTTTGTGGCCATAATATGCTCCTCTTGTTCAATAATACCACGTCTCTTAACATGGTCCAAGCTAGAGGTTGATGTTCATATCTATACAAGTCTAGTACCAAACAAGAAAAATTAAATGTATAAATTGATAAGACAACGAAAATTAATCAATTTTGTTGATGAAAGAAACCATTTTATGGTTCTGGAGAGTGAGAAGATTTGTACCACTTTTAAAAATTCAAACTCAATTAATTTCTTATAATTAATGATATAATTTTTTTCCAAAAAATGAATTTGATACGTTTCTATTCTAGTAGTTTGTTTTTTCCTTTTCAAACATTTTGAATATTCTTTTTTGTTGTTGCCGCTGTGTTTTATAGTTCTCGAACTTTCTATTATGTAATAGATTAGTCTTGCATTGGATCCATCCGGCTCAAAATCCAATGAATCGATAGTTAACTATTTTTTTAGTGATTGCCATCGCAAAGCTAGTCGTTGCCAGCTCTAATGGTTGAAAATATCCAAACTTGCTTACCCACCCCACCTCATACGACTAGTTTGGGGGGAGGGGTTGGTTGTTCGCCTTTTAGAGACACCTAAAAACCTCACATTCGAAGGAAGCATAAAAAATTCTCAGCGCGCAAGAATTAGGATTATTGTACCTATCATAATCCATGACGTTCTTTTATGAAAATTTCAATTTTTTTACACTATGTCCAATAAATACGTCAATTTTGAAAAATTCAAACAAATTCAAGGTCAAACTAATCGATATTTTAACCTTTTGAATATTTTAATTTTTTTTTTAAAAGATGCGAAAAACACCTCATTTAAATAAGATGAACTCGAATTTTGATTTGATTTGTCGAATGATTGGTGGTAGGTCACTGAACTTGATAGGGTTGAGAAGTCATATCATAAACTTGTGAATCAGAAGTCATATTGTGTCCATATCAAAGGAGTTAATGAGTTGATTTTCAAAACCAAATTGGATATTCCTACCGGCAAAACTCAAAGGTCAATGTTCAAACTTCGTATTAAATGATAATTTAGACATTGTGAATTGTATACTCCATGTTTGGCCGTCTTTCATCTCTTATAAATCATATACAGCTTCCAATTGTTGATACAAGATTTGATCCTTCAATTCTTCCTTCTTCTCTTTTCTCCGTTTTTCCATTGAAGAACTCTAAATTATGGGTCGAAATTTCAACCATCCGAAGTCAGAACCGATACTGCAAGATTTGTTTTTGGCAGGATCTAGCTCGAAAACCGAGGACGCTACGACATCGGTCATGGTGCTACTAGGATGTACTCAATGCCTCATGTACGTCATGTCGTCGAAGTTTGATCTCAAGTGTCCCAAATGTAATAACACTACGTTGCTCGATGTTCACAATTTGGCCAATCAAGCATCCAAGAAAAATCTTGTTGACATGTCAATCGACGTTGCTAAATGA ATGACGCAGCTGCTCGAAGTTGCAGCATCTCCGTCGAAAAATCCCTTTCAAGTTGCTCCGGAACAATTAAGAGATCTTCTAGAAGGCCGTTTAGGCCTTGAATCCTGTCCTGGACTTTCCATCGGTGGTCTGACCTTGCTGAAAGATAGGTCATGGGTCACTGAACTTGATAGGGTTGAGAAGTCATATCATAAACTTGTGAATCAGAAGTCATATTGTGTCCATATCAAAGGAGTTAATGAGTTGATTTTCAAAACCAAATTGGATATTCCTACCGGCAAAACTCAAAGCTCGAAAACCGAGGACGCTACGACATCGGTCATGGTGCTACTAGGATGTACTCAATGCCTCATGTACGTCATGTCGTCGAAGTTTGATCTCAAGTGTCCCAAATGTAATAACACTACGTTGCTCGATGTTCACAATTTGGCCAATCAAGCATCCAAGAAAAATCTTGTTGACATGTCAATCGACGTTGCTAAATGA ATGACGCAGCTGCTCGAAGTTGCAGCATCTCCGTCGAAAAATCCCTTTCAAGTTGCTCCGGAACAATTAAGAGATCTTCTAGAAGGCCGTTTAGGCCTTGAATCCTGTCCTGGACTTTCCATCGGTGGTCTGACCTTGCTGAAAGATAGGTCATGGGTCACTGAACTTGATAGGGTTGAGAAGTCATATCATAAACTTGTGAATCAGAAGTCATATTGTGTCCATATCAAAGGAGTTAATGAGTTGATTTTCAAAACCAAATTGGATATTCCTACCGGCAAAACTCAAAGCTCGAAAACCGAGGACGCTACGACATCGGTCATGGTGCTACTAGGATGTACTCAATGCCTCATGTACGTCATGTCGTCGAAGTTTGATCTCAAGTGTCCCAAATGTAATAACACTACGTTGCTCGATGTTCACAATTTGGCCAATCAAGCATCCAAGAAAAATCTTGTTGACATGTCAATCGACGTTGCTAAATGA
BLAST of CmoCh13G003690 vs. TrEMBL
Match: A0A072VKL8_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_1g058120 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.7e-06 Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 1
BLAST of CmoCh13G003690 vs. TAIR10
Match: AT3G11600.1 (AT3G11600.1 unknown protein) HSP 1 Score: 53.1 bits (126), Expect = 1.8e-07 Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 1
BLAST of CmoCh13G003690 vs. TAIR10
Match: AT5G06270.1 (AT5G06270.1 unknown protein) HSP 1 Score: 52.4 bits (124), Expect = 3.1e-07 Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 1
BLAST of CmoCh13G003690 vs. NCBI nr
Match: gi|922401569|ref|XP_013467921.1| (hypothetical protein MTR_1g058120 [Medicago truncatula]) HSP 1 Score: 60.8 bits (146), Expect = 2.4e-06 Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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