CmoCh12G011720 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh12G011720
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionReticulon-like protein
LocationCmo_Chr12 : 10607591 .. 10613833 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAATTCCCTGTTCTTCTGTTTCAAAGTAGTTCAGATTTCCTCTGACCGCCATTTTTACACCTTGAGATTGGTTTACAGAGGGTTTTTTTGTGCGTTCGTAGGCGGCGGCGATGGATTTGAGCCGGCGGAGAGCGGCGGTGGCAAGGGGGAACGTGGTGGCGGGGTCTGTCTGGGAAAGCAGAATCCGATTCGATGAAGTCCGTGGTGGGATTAGGGTTTTCAATGGAGACGATGAAACCGTCGAATGTAGGGTTCCGGCCGCTACCGTCGGGAGTGCAAGGAGGAAGACGTGGAAATCCGATGAGGGTTTTAACTCGATTCAAATCGCCGAGGAAAAACCAGAATCACCGAGTAGCGGCGATGAACAGAATCGGAAAACCCCGATTCCGTCTCGGAGATTGAGATCCAACAACAGTCCAAACAAACCGGTACGAATAACAGAGAGAAACTCAACGAGGAAGAAAATCGATCAGTCTCGAAAATCGGCCGTCGGGATTACCAAACCGCCGACGAACACAAACGGAATCAGAAAAATCTCCCCGGATAAGACGGTTTCATCTCCTCCACCTCAAGATTTCTTCGATGCATTCGAAGAGATTAAGAACGAAAGCTTCGACGTTAAGGAAATCAATTTTCCAGCCCAAGAAATTTTCCCGGGAAACAAACAGAAATTACAGAGACTAAGTGAGAACAGAGCCTCCCATTTTCATTACAGAATCTCAAAATTTAATTTCCTTAACTGTTTGATTTCTTGCAGTGGATTTGATAATGTGGAGGGAGTTTTCAAGATCCGCCATGGCATTTGGAGCTGGGAATTTGGTTATAGCCCTCTCTTATTTCATCAAGAACATGAACATCAGGTAAAAACAAAAAAAAACCCCAAATCCGCCATTGAAGAAGGGTTGTTGAGCTTTGTTTTGTTTTTCGAATTTGCAGCTTTATCAGTATGATTTCGCATATGGGTCTTGTTTATCTGGCTGCCATTTTCGTCCATAGCTCCATTTTTAGCAGGTGCTCGATCAATTTCGTTCTGTTTTGTTTAGCTTAAGCTTGTTTTAGGGAATGATCATGAGTTTATAAACATAGAATACTCTCTCCATTGGTACGAGGCTTTTTGGGAAAGCCCAAATCAAAGCCATGAGAAGTTATGTTCAAAGTGGACAATATCATACCATGGTGGAGAGTCGTATTCGTTTAACAAACCTCTGTTTTTGCATTTAATTTTCCCGGGAAAATTACAGGGGAAATGGAAAGGGAATCGATAGTGATGATGAACATTGTGTGGTTGAAGAAGAAGTGATTCGATTGGTTAGAGGGTTTGTTCCTTTCGTGAATGAATTGCTGCAAAATCTCAAGCCTCTGTTCCATGGAGATCCTTCTGCAACTTTGAAGGTAATATATATACTCTTAAATTTTCTATTTTCTTTACTCAATTACACGTTTTTTCCAACTAAAATTATTTTATTTAAAAAATATTTTAAAATTTTAATAGTATTTAAAATATTTCATTAATATCTTTCCTTTTTTTATTTTTTAAAAAGTTTTTTAAAAAATATACATAAAATTTTATAAATAATATTAACACTATGAACAAAAACCGTCTATCTACACTATATAGATTATTTTCGAACTTTTTAATGTTATTTTTGAAAATTCACGCATAATTTTGAAACGGGTTACTAACGTTAAAAATATTTTTAAAAATTGAAGCTATCCATGAAAATTCATACATATTTTTGAAATGTGTTACTAACTTTAAAAATATTTTAATTTTTTTTAAAAATTGAAGTTTATTATTAATGAAAATTCAGACATATTTTTAAAACGTATGACTAACGTTAAAAAGATTTTTAATTTTTTTTTTTCAAAATTGAAGCTTATTATTAATGAAAATTCATGCATATTATTGAAATGTGTTGCTAACGTTAAAAATATTTTTAAATTTTTTTGAAAATTGAAGCTTATTATTAATGAAAATTCATGCATATTTTTGAAACGTGTTACCAACGTTAAAAATATTTTTAAATATTTTTAAAAATTGAAGCTTATTATTAATGAAAATTCATGCATATTTTTGAAACTTATTACTTATGTTAAAAATATTTTTAAATATTTTCGATGATTGAAGCTTATTATTAATGAAAATTCATGCATATTTTTGAAACTTATTACTTATGTTAAAAATATTTTTAAATATTTTTAAAAATTGAAGCTTATTATTAATGAAAATTCATGCATATTTTTGAAACTTATTACTTATGTTAAAAATATTTTTAAATATTTTTAAAAATTGAAGCTTATTATTAATGAAAATTCATGCATATTTTTAAAACTTATTACGAACGTTAAAAATATTTTTAAAAATTGAAGCTTATTATTAATGAAAATTCATGCATATTTTTGAAACTTATTACTTATGTTAAAAATATTTTTAAATATTTTTAAAAATTGAAGCTTATTATTAATGAAAATTCATGCATATTTTTAAAACTTATTACGAACGTTAAAAATATTTTTAAAAATTGAAGCTTATTATTAATGAAAATTCATGCATATTTTTGAAACGTGTTACTACGTTAAAAATATTTAAATTTTTTTAAAAAAATTGAATTTATTATTAATGAAAATTCATGCATAATTTTGAAACGGGTTACTAATGTTAAAAATATTTTTAATTTTTTTTAAAAAATTGAAGCTTATTAAATTCAACAGTATTTTAAAAATATTTGTAAAAATTAAACGGCATTTTAAAAATATTTTTATAAGTGTAAGAATATTTTTAAAATATAGTATTCACCATCTTTGCCCGCCCAAAATTAATGTTAACGATATTTTAAAACATTTTTGAAAATTTAAGAATATTTTTATACGGAGATAAAAAGTAAAATTTATTGTTATCTTTTACCATTTTTGAAGAGGGTTAAAAATGGGCAATTATGGTAAGAAATATAGAAATATATGGTAAAAAGAAAGTGTAATAAATATTTATTAAAATTTAAAATTGTTTGGTAATTTGCAGATGGGCGTACTGCTGTTCGTGTTGGCAAAGTGGGGCAGCTTCATCACCTTTTGGAATATCCTCCAATGCGGTAAATTTTTCTTTTACCATCTTTTTTTCATCCACCTAATTTCACTTTCTTTTTTTAAAATAAAAATAAGCTTTTAAATATTGAAAGAAATAATTTTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTTCTGACAAATGGATGTACTGATTGACTGGCACAGGATTCGTTGCGGTTTTCACCCTCCCCAAATTATTTACCCACGGTAAAAAACACATCTCCACGGACTTATAAACTTTTCTATCTTTTATTCTTACTTATAAACTTTTCTATCTTTTATTCTTTTTTGGGTTACAATTCAATACGGCCGAGTACAACAAACCACCGTACTCCTCTGTCTTTTCATCCGTCGATTTGTTTGTGACCCTCTTTTGTTCCCTTCATAAAACGACCACGTTTTAAATTCTAAAATTTCGAAAAGGGAATAAAAATTAAAATTGTTATATACTTTATTTGTCGGTAATTTATTTTCTTCTCTGTAAGTTCTCGTGTCAGTTCTGTCGGATCGGATGATTTAATGTTTGATTCAATCTCCACCCTTCATTTTTCTTTTCTTTTTTTTTGTGTTTTAATTTTAAAATTAAAAATAAATATTTTATTTTCATCTTTGGATTCTAAAAACTTTAATTTGGTTCGTGACTTATTTTTGTTTTTATGTTTCCATTTGAATCACATGAAACTTTAGCTTTAAATATCTAATTATTCTCTTAGGTAGCGTCTACTCCGTTCTTAAATTTTGAAACGGGTTTAGATCCTAATAGGTGTCTCATTCATCGAACTATCCTTAGGTTAGTAGAAACATAATGACTTGCTAATCGAGGGAGCTATGTGTCTTCAAAGTTGCCACGCGAAATTGGTTTCAGTCTCGGCCAATTTTCGTTCGACTGATGTCGGGTACCATTAGACAGTTCTAGGACAGTTCTGAAAAGCTGGTTTGTTTTTTCAAGATCTTAATATTCCCTTGGGAAACCGTGCTAGGACTCGAATTTCGAAGAAAAAAGAGCTTATAGTAGTACTATGCTTACGAGCTTGAAATCGATACCTTAATTGGGTTGTTTGGAGCACACACGCGGAAAAATTGATTATTAGTCTTTGCTATATGAACGCCCATTTGCCCTTTTGATCGGGACGATCGAGGTCTTTGTTTATTGACTTTTTGTTTGTCTATGTGTGTTTCTTTACTTTACTCGTGTGGGAGAAAGGAAGAAACAAAAATGAAGAAACTAAATCGTTATCAAACGAAGTTTGTTTAGAATATGACGCGGATTCGTGTTTATGTTTTTAAGAGTTCTTTTTTTGTGAATTAGGAGAACATTGGTTGAGGCTTTGTGGGAGTTCTTGGCAGCTGAGTTCCCACAAGAAGGGAATGATTGTTGCTATCTTCCTTATGGTATGGAACTTCTCTTCGATTCTATATCGCGTTTGGGCAGGTAAACCATTTCGAACTGAAATCTTAATCTGTTTCGAGATGTAGATTCGAACGTGTAACGTTATTGAAATGAAGTATGATTTTGCAGCTTTCATAGCGTTTGTGAGCTTTCGCTACTACCGGGAATCATTAGGGAGAGATGGTTGGGTTAAAAATGGAGAAGCAGCTCGACATAACGACACGGTTTCGGGTAAGTTCAAAGCTTGAGAGATAATTTTGATCAATTTTGAGGCTCTTTTCCTATGCTTTCTTTTGAGCTAGCTTGAAAATTACCATGTAAATTAATGGAGTATGGTAGAAAGCCATCTTGTTCCTTAAAAAATGGAAAGTGTTTCTTTTTTATTCTCTTTATTTGAATTTGAAAGTGAGAAAATAATGATTATAATTTGTGACACTCGAGTAAATAAGAGGTACATGAATGACTCGAGATCACATGCTGAGAATAGATTGAGGAGGAGAACAAAACACCCTTTACAAGGGTGTCAAAACCTTTCCTAGTAAACACGTTTTAAAGCCTTTAGTGGTAGCCAGAGGGAAACAGTATCTGCTAACAGTGCGCTTGAACTGTTACAAATGGTATCAGAGCTAGACATTAGACTATGTGCCAGCGAGGAGGCTATTCCCAGATGGGGGTAGACATGAGGCGGTGTGCCAGTAAGGACACTGGGTCTCGAAGGAGGATGGATTTGGTAGGGTCCCACGTCGATTGGAGAAAGTAACGAGTGTTAGCGAGCGAGGACGTTGGGCCTCAAAGAGAGTGAGTTGTGATATCCCACATTGGTTGGGTGGAGAAACAAGAGTGGAACAAACCATGTTAGAAACACTCTGTCGGTTTGTAGAGATAGGGTCCCACATCGATTGGAGAAAGTAACAAGTACCTGCGAGGACACTGGCCCCAGAGGGAGTGGATTATGATATCCCACATTGGTTGAGGAGGAGAACGAAACACCCTTTATCAGAGCGTGGAACAAACCATCTTAAAAAGACTTTGTGTTGGTTTGTAGAGATAGTCGGAATGTCATTATCAGAGTGTGGAACAAACCATCTTAGAAAGACTCTGTGTTGGTTTGTAGAGATAGTCGGAATGTCATCAGAATGTTAGAGTCATTAGATACCCGTTTTTCCGGAAATAATTTTGTTTTTTTTTGTGGTGCAAGATATTGAAAATATAATTTTCTTTTTTGCTTATTAATTAAAAAAAAAAAATGAAACATGTGATACATTTAATTCACATGGGTTTGGCTTAATGCAATGAATAGGGACCAACTTTATTTTCTTTTTCTTTTTTTAAAAATAAAAACTTTATTAAATTTCACTTTTATTGACTTTTCTTTCCCATAATTATATTTAACATTCCAATTTGTAGATTTTTATTAGAAAAAGCACTTCAAATATTGTTTCTCTTTGTCTTTCACTATTATTTATTAAAATATTACAAATTTATTATTTATTATTATTACTATTAATATATTTTAATTTGTTGAATAGTTTTCATGGTGGTGATAGTGGATGGAAGCTCAATCCTTTCTAAAATGCTTAGAAACTATGTCTAG

mRNA sequence

GAATTCCCTGTTCTTCTGTTTCAAAGTAGTTCAGATTTCCTCTGACCGCCATTTTTACACCTTGAGATTGGTTTACAGAGGGTTTTTTTGTGCGTTCGTAGGCGGCGGCGATGGATTTGAGCCGGCGGAGAGCGGCGGTGGCAAGGGGGAACGTGGTGGCGGGGTCTGTCTGGGAAAGCAGAATCCGATTCGATGAAGTCCGTGGTGGGATTAGGGTTTTCAATGGAGACGATGAAACCGTCGAATGTAGGGTTCCGGCCGCTACCGTCGGGAGTGCAAGGAGGAAGACGTGGAAATCCGATGAGGGTTTTAACTCGATTCAAATCGCCGAGGAAAAACCAGAATCACCGAGTAGCGGCGATGAACAGAATCGGAAAACCCCGATTCCGTCTCGGAGATTGAGATCCAACAACAGTCCAAACAAACCGGTACGAATAACAGAGAGAAACTCAACGAGGAAGAAAATCGATCAGTCTCGAAAATCGGCCGTCGGGATTACCAAACCGCCGACGAACACAAACGGAATCAGAAAAATCTCCCCGGATAAGACGGTTTCATCTCCTCCACCTCAAGATTTCTTCGATGCATTCGAAGAGATTAAGAACGAAAGCTTCGACGTTAAGGAAATCAATTTTCCAGCCCAAGAAATTTTCCCGGGAAACAAACAGAAATTACAGAGACTAATGGATTTGATAATGTGGAGGGAGTTTTCAAGATCCGCCATGGCATTTGGAGCTGGGAATTTGGTTATAGCCCTCTCTTATTTCATCAAGAACATGAACATCAGCTTTATCAGTATGATTTCGCATATGGGTCTTGTTTATCTGGCTGCCATTTTCGTCCATAGCTCCATTTTTAGCAGGGGAAATGGAAAGGGAATCGATAGTGATGATGAACATTGTGTGGTTGAAGAAGAAGTGATTCGATTGGTTAGAGGGTTTGTTCCTTTCGTGAATGAATTGCTGCAAAATCTCAAGCCTCTGTTCCATGGAGATCCTTCTGCAACTTTGAAGATGGGCGTACTGCTGTTCGTGTTGGCAAAGTGGGGCAGCTTCATCACCTTTTGGAATATCCTCCAATGCGGATTCGTTGCGGTTTTCACCCTCCCCAAATTATTTACCCACGGAGAACATTGGTTGAGGCTTTGTGGGAGTTCTTGGCAGCTGAGTTCCCACAAGAAGGGAATGATTGTTGCTATCTTCCTTATGGTATGGAACTTCTCTTCGATTCTATATCGCGTTTGGGCAGCTTTCATAGCGTTTGTGAGCTTTCGCTACTACCGGGAATCATTAGGGAGAGATGGTTGGGTTAAAAATGGAGAAGCAGCTCGACATAACGACACGGTTTCGGTTTTCATGGTGGTGATAGTGGATGGAAGCTCAATCCTTTCTAAAATGCTTAGAAACTATGTCTAG

Coding sequence (CDS)

ATGGATTTGAGCCGGCGGAGAGCGGCGGTGGCAAGGGGGAACGTGGTGGCGGGGTCTGTCTGGGAAAGCAGAATCCGATTCGATGAAGTCCGTGGTGGGATTAGGGTTTTCAATGGAGACGATGAAACCGTCGAATGTAGGGTTCCGGCCGCTACCGTCGGGAGTGCAAGGAGGAAGACGTGGAAATCCGATGAGGGTTTTAACTCGATTCAAATCGCCGAGGAAAAACCAGAATCACCGAGTAGCGGCGATGAACAGAATCGGAAAACCCCGATTCCGTCTCGGAGATTGAGATCCAACAACAGTCCAAACAAACCGGTACGAATAACAGAGAGAAACTCAACGAGGAAGAAAATCGATCAGTCTCGAAAATCGGCCGTCGGGATTACCAAACCGCCGACGAACACAAACGGAATCAGAAAAATCTCCCCGGATAAGACGGTTTCATCTCCTCCACCTCAAGATTTCTTCGATGCATTCGAAGAGATTAAGAACGAAAGCTTCGACGTTAAGGAAATCAATTTTCCAGCCCAAGAAATTTTCCCGGGAAACAAACAGAAATTACAGAGACTAATGGATTTGATAATGTGGAGGGAGTTTTCAAGATCCGCCATGGCATTTGGAGCTGGGAATTTGGTTATAGCCCTCTCTTATTTCATCAAGAACATGAACATCAGCTTTATCAGTATGATTTCGCATATGGGTCTTGTTTATCTGGCTGCCATTTTCGTCCATAGCTCCATTTTTAGCAGGGGAAATGGAAAGGGAATCGATAGTGATGATGAACATTGTGTGGTTGAAGAAGAAGTGATTCGATTGGTTAGAGGGTTTGTTCCTTTCGTGAATGAATTGCTGCAAAATCTCAAGCCTCTGTTCCATGGAGATCCTTCTGCAACTTTGAAGATGGGCGTACTGCTGTTCGTGTTGGCAAAGTGGGGCAGCTTCATCACCTTTTGGAATATCCTCCAATGCGGATTCGTTGCGGTTTTCACCCTCCCCAAATTATTTACCCACGGAGAACATTGGTTGAGGCTTTGTGGGAGTTCTTGGCAGCTGAGTTCCCACAAGAAGGGAATGATTGTTGCTATCTTCCTTATGGTATGGAACTTCTCTTCGATTCTATATCGCGTTTGGGCAGCTTTCATAGCGTTTGTGAGCTTTCGCTACTACCGGGAATCATTAGGGAGAGATGGTTGGGTTAAAAATGGAGAAGCAGCTCGACATAACGACACGGTTTCGGTTTTCATGGTGGTGATAGTGGATGGAAGCTCAATCCTTTCTAAAATGCTTAGAAACTATGTCTAG
Homology
[Close]
BLAST of CmoCh12G011720 vs. Swiss-Prot
Match: RTNLS_ARATH (Reticulon-like protein B21 OS=Arabidopsis thaliana GN=RTNLB21 PE=2 SV=2)

HSP 1 Score: 193.4 bits (490), Expect = 5.3e-48
Identity = 127/356 (35.67%), Postives = 195/356 (54.78%), Query Frame = 1 

Query: 59  KTWKSDEGFNSIQIAEEKPESPSSGDEQNRKTPIPSRRLRSNNSPNKPVRITERNSTR-- 118
           K+ ++++  N  Q   ++ +    GDE+        R +   +   K + + + N     
Sbjct: 113 KSNENEQIDNGDQEIGDQDDYEEDGDEEEE------REVEKKSVDVKEINVAKENRVGGV 172

Query: 119 --KKIDQSRKSAVGITKPPTNTNGIRKISPD-----KTVSSPPPQDFFDAFEEIKNESFD 178
             KK  Q +      T P  + + +RKISP       +V S PP            + F 
Sbjct: 173 EIKKFSQFQNR----TSP--SPSSVRKISPPVIKRATSVYSAPPNS------TSSTDRFA 232

Query: 179 VKEINFPAQEIFPGNKQKLQRLMDLIMWREFSRSAMAFGAGNLVIALSYFIKNMNISFIS 238
            +E NF   +       KLQ L+DL+MWR+ SRS + FG G  +I  S +  ++N SFIS
Sbjct: 233 EQEDNFTHSQ------SKLQSLVDLVMWRDVSRSTLVFGFGTFLIISSSYANDLNFSFIS 292

Query: 239 MISHMGLVYLAAIFVHSSIFSRGNGKGIDSDDEHCVV---EEEVIRLVRGFVPFVNELLQ 298
           ++++MGL+YL  +FV  S+  RG    +  ++ H VV   EE+V R++R  +P++NE L 
Sbjct: 293 VVAYMGLIYLGLMFVLKSLIHRG----MVEEERHKVVGVREEDVKRMLRLIMPYLNESLH 352

Query: 299 NLKPLFHGDPSATLKMGVLLFVLAKWGSFITFWNILQCGFVAVFTLPKLF--------TH 358
            L+ LF GDPS TLKMGV+LFVLA+ GS IT WN+ + GF+  FT+PK+F         +
Sbjct: 353 QLRALFSGDPSTTLKMGVVLFVLARCGSSITLWNLAKFGFLGAFTIPKIFISYSTHFSAY 412

Query: 359 GEHWLRLCGSSWQLSSHKKGMIVAIFLMVWNFSSILYRVWAAFIAFVSFRYYRESL 395
           G  W+R    +W+  +HKK + +A+F +VWN SS+  RVWAAF+  V+FRYY+  +
Sbjct: 413 GNFWMRRFRDAWESCNHKKAVALALFTLVWNLSSVTARVWAAFMLLVAFRYYQHKM 440

[Close]
BLAST of CmoCh12G011720 vs. Swiss-Prot
Match: RTNLQ_ARATH (Reticulon-like protein B17 OS=Arabidopsis thaliana GN=RTNLB17 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 5.7e-26
Identity = 89/301 (29.57%), Postives = 140/301 (46.51%), Query Frame = 1 

Query: 102 SPNKPVRITERNSTRKKIDQSRKSAVGITKPPTNTNGIRKISPDKTVSSPPPQDFFDAFE 161
           SP  P R   R+   ++ + +      +  PP       +   DK  S+PP     D   
Sbjct: 96  SPRNPRRSRRRSEAVEEKEANLVIEEIVKLPPRKRKTNGRPKKDKQSSAPPLCSSSDLPN 155

Query: 162 EIKNESFDVKEINFPAQEIFPGNKQKLQRLMDLIMWREFSRSAMAFGAGNLVIALSYFIK 221
             +++   + EI                 + DL+MWR+ ++S + FG G L    S F K
Sbjct: 156 TCQSDLNLIGEI-----------------ISDLVMWRDVAKSTLWFGFGCLSFLSSCFAK 215

Query: 222 NMNISFISMISHMGLVYLAAIFVHSSIFSRGNGKGIDSDDEHCVVEEEVIRLVRGFVPFV 281
            +N S  S +S++GLV L   F+ +++  R N    D+     V E++V+R  R  +P  
Sbjct: 216 GVNFSVFSAVSNLGLVLLCGSFLSNTLCQRKNE---DTKRAFHVSEDDVLRSARRVLPAT 275

Query: 282 NELLQNLKPLFHGDPSATLKMGVLLFVLAKWGSFITFWNILQCGFVAVFTLPKLFTHGEH 341
           N  +     LF G+PS TLK+   L + A++G  IT W +   GF   FT+PKL++   H
Sbjct: 276 NFFISKTSELFSGEPSMTLKVTPFLLLGAEYGHLITLWRLSAFGFFLSFTIPKLYSCYTH 335

Query: 342 WL--------RLCGSSWQLSSHKKGMIVAIFLMVWNFSSILYRVWAAFIAFVSFRYYRES 395
            +           G +W + SHKK +  +     WN +SI  R++A FI  V FRY R++
Sbjct: 336 QISQKVERVKTRIGEAWGVCSHKKILAGSAVTAFWNLTSIRTRIFAVFIILVIFRYRRQN 376

[Close]
BLAST of CmoCh12G011720 vs. Swiss-Prot
Match: RTNLR_ARATH (Reticulon-like protein B18 OS=Arabidopsis thaliana GN=RTNLB18 PE=2 SV=2)

HSP 1 Score: 108.6 bits (270), Expect = 1.7e-22
Identity = 69/230 (30.00%), Postives = 120/230 (52.17%), Query Frame = 1 

Query: 178 QEIFPGNKQKL-QRLMDLIMWREFSRSAMAFGAGNLVIALSYFI-KNMNISFISMISHMG 237
           Q++  G+ +++ + + DLIMWR+ ++S + FG G +    + F  K  N S  S IS++G
Sbjct: 181 QDVCQGDLERIRENISDLIMWRDVAKSTLWFGFGCICFLSTCFAAKGFNFSVFSAISYLG 240

Query: 238 LVYLAAIFVHSSIFSRGNGKGIDSDDEHCVVEEEVIRLVRGFVPFVNELLQNLKPLFHGD 297
           L++L   F+ +++  R      ++  E  + E++V+R+ R  +P  N  +     LF G+
Sbjct: 241 LLFLGVSFLSNTLRQRVTE---EARRELKLSEDDVLRIARRMLPITNLAISKTSELFSGE 300

Query: 298 PSATLKMGVLLFVLAKWGSFITFWNILQCGFVAVFTLPKLFTHGEHWL--------RLCG 357
           P+ TLK+   + + A++G  IT W +   GF   FT+PKL++     L        R   
Sbjct: 301 PAMTLKVAPFVLMGAEYGYLITLWRLCAFGFFLSFTIPKLYSCYASQLNQKVECAQRRFV 360

Query: 358 SSWQLSSHKKGMIVAIFLMVWNFSSILYRVWAAFIAFVSFRYYRESLGRD 398
            +W + +HKK +  +     WN +S+  R  A FI  V  RY R++L  D
Sbjct: 361 EAWGVCTHKKFVAGSAVTAFWNLTSLKTRFIAVFIIVVVIRYRRQNLQLD 407

[Close]
BLAST of CmoCh12G011720 vs. TrEMBL
Match: A0A0A0LG57_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_2G009500 PE=4 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 2.0e-163
Identity = 316/439 (71.98%), Postives = 355/439 (80.87%), Query Frame = 1 

Query: 1   MDLSRRRAAVA-RGNVVAGSVWESRIRFDEVRGGIRVFNGDDETVECRVP--AATVGSAR 60
           MDLSRRRAAVA +GNVVAGSVWESRIRFDEVRGGI+VFNGDDE VEC +P  AA+ GS R
Sbjct: 1   MDLSRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIPTTAASAGSGR 60

Query: 61  RKTWKSDEGFNSIQIAEEKPE-SPSSGDEQNRKTPIPSRRLRSNNSPNKPVRIT----ER 120
           RKTWKSDEGFN I IAEEKPE SPSSGDEQ+RK+P PSRRLRSN+SPNKPV+++    ER
Sbjct: 61  RKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEKIER 120

Query: 121 NSTRKKIDQSRKSAVGITKPPTNTNGIRKISPDKT-----------VSSPPPQDFFDAF- 180
           NSTRKK DQSRKSAVG+TKPP  TNGI K S +K+           +SS   QDFFDAF 
Sbjct: 121 NSTRKKTDQSRKSAVGLTKPP--TNGIGKTSSEKSFKESNECREKVISSSTSQDFFDAFE 180

Query: 181 EEIKNESFDVKEINFPAQ-----EIFPGNKQKLQRLMDLIMWREFSRSAMAFGAGNLVIA 240
           EEI+ ESFDVKEIN P +     + FPGNKQKLQ LMDLIMWR+FSRS + FG GNLVI 
Sbjct: 181 EEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVII 240

Query: 241 LSYFIKNMNISFISMISHMGLVYLAAIFVHSSIFSRGNGKGIDSDDEHCVVEEE-VIRLV 300
           LS FIKN+NIS IS+ISHMGL+YL  IFVHSSIF  G  K IDS+DE+ VVEEE +IR  
Sbjct: 241 LSCFIKNINISLISLISHMGLLYLTTIFVHSSIF--GRRKRIDSNDENLVVEEEDMIRFA 300

Query: 301 RGFVPFVNELLQNLKPLFHGDPSATLKMGVLLFVLAKWGSFITFWNILQCGFVAVFTLPK 360
           +  VPFVNELLQNLK LF GDPSAT+K+GVLLFVLAKWGSFIT WN+L+ GF+ VFTLPK
Sbjct: 301 KRLVPFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKIGFIGVFTLPK 360

Query: 361 LFTHGEHWLRLCGSSWQLSSHKKGMIVAIFLMVWNFSSILYRVWAAFIAFVSFRYYRESL 414
           L THGEHWL+LCGSSW+L SHK+G+ +AIF +VWNFSS LYRVWAAFI  VSFRYY+ES 
Sbjct: 361 LITHGEHWLKLCGSSWKLCSHKRGVFIAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESP 420

[Close]
BLAST of CmoCh12G011720 vs. TrEMBL
Match: V4SBM5_9ROSI (Reticulon-like protein OS=Citrus clementina GN=CICLE_v10028046mg PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.7e-51
Identity = 111/236 (47.03%), Postives = 156/236 (66.10%), Query Frame = 1 

Query: 177 AQEIFPGN--KQKLQRLMDLIMWREFSRSAMAFGAGNLVIALSYFIKNMNISFISMISHM 236
           A + FP    K KLQ L+DL+MWR+ S+SA  FG G  +I  S +  ++NISFIS+IS++
Sbjct: 324 AYQSFPETQTKSKLQNLVDLVMWRDVSKSAFVFGIGTFIIISSSYATDLNISFISVISYL 383

Query: 237 GLVYLAAIFVHSSIFSRGNGKGIDSDDEHCVV-EEEVIRLVRGFVPFVNELLQNLKPLFH 296
           GL+YLA IF++ +I  RG    ID DD   V+ E E I L++  +P++NE L  LK LF 
Sbjct: 384 GLIYLAVIFLYRAIICRGI---IDIDDSSYVLGEGEAIWLLKLILPYLNEFLLKLKALFS 443

Query: 297 GDPSATLKMGVLLFVLAKWGSFITFWNILQCGFVAVFTLPK--------LFTHGEHWLRL 356
           GDP+ T+K+ VLLFVLA+ GS IT W +++ GF  VF +PK        L  +G+ W+R 
Sbjct: 444 GDPATTMKLAVLLFVLARCGSSITIWKMIKVGFFGVFIVPKVCSSYSTQLAAYGKFWIRR 503

Query: 357 CGSSWQLSSHKKGMIVAIFLMVWNFSSILYRVWAAFIAFVSFRYYRESLGRDGWVK 402
              +W   SHKK + V IF +VWN SS++ R+WAAF+ FV+ RYY++S+ RD WV+
Sbjct: 504 FRDAWDSCSHKKAVAVGIFTLVWNLSSMIARIWAAFMLFVALRYYQQSMIRDDWVE 556

[Close]
BLAST of CmoCh12G011720 vs. TrEMBL
Match: M5VUB7_PRUPE (Reticulon-like protein OS=Prunus persica GN=PRUPE_ppa002580mg PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.7e-51
Identity = 126/316 (39.87%), Postives = 183/316 (57.91%), Query Frame = 1 

Query: 108 RITERNSTRKKIDQSRKS----AVGITKPPTNTNGIRKISPDKTVSSPPPQDFFDAFEEI 167
           ++ + N  +K +   RK     ++ +TKP      +  I      S+ P Q  F A  E 
Sbjct: 324 KVVKVNEVKKLLHLDRKEPEPISLNLTKP------LPVIKRATVHSNIPKQTSFAASNEY 383

Query: 168 KNESFDVKEINFPAQEIFPGNKQKLQRLMDLIMWREFSRSAMAFGAGNLVIALSYFIKNM 227
            N +             F     +LQ L+DLIMW++ SRS   FG G  VI  S + K++
Sbjct: 384 HNHTS------------FQETHSRLQSLVDLIMWKDISRSVFVFGMGTFVILSSSYTKDL 443

Query: 228 NISFISMISHMGLVYLAAIFVHSSIFSRGNGKGIDSDDEHCVV-EEEVIRLVRGFVPFVN 287
           NISFIS+IS++GL+YLA IF+  SI  RG    ++ D+ + VV EEE + L++  +P++N
Sbjct: 444 NISFISVISYLGLLYLAVIFLFKSIICRG---AVEVDNANYVVGEEEAMWLLKLVLPYLN 503

Query: 288 ELLQNLKPLFHGDPSATLKMGVLLFVLAKWGSFITFWNILQCGFVAVFTLPK-------- 347
           ELL  +K LF GDP+ T+K+ VLLFVLA+ GS IT W + + GF  VFTLPK        
Sbjct: 504 ELLLKMKALFSGDPATTIKLAVLLFVLARCGSSITIWTMSKVGFFGVFTLPKVCSLYSAQ 563

Query: 348 LFTHGEHWLRLCGSSWQLSSHKKGMIVAIFLMVWNFSSILYRVWAAFIAFVSFRYYRESL 407
           L  + + W+R    +W+  +HKK + VAIFL+VWN SS++ R+WAAFI  V+FRYY++ L
Sbjct: 564 LTVYAKFWIRRFRDAWESCTHKKALTVAIFLLVWNLSSVVARIWAAFILVVAFRYYQQKL 618

Query: 408 GRDGWVKNGEAARHND 411
             + WV+  E    +D
Sbjct: 624 VTEEWVEEEEEEADDD 618

[Close]
BLAST of CmoCh12G011720 vs. TrEMBL
Match: A0A0D2SI09_GOSRA (Reticulon-like protein OS=Gossypium raimondii GN=B456_013G216600 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 8.0e-51
Identity = 107/233 (45.92%), Postives = 157/233 (67.38%), Query Frame = 1 

Query: 181 FPGNKQKLQRLMDLIMWREFSRSAMAFGAGNLVIALSYFIKNMNISFISMISHMGLVYLA 240
           FP  + KLQ ++DL+MWR+  +SA+ FG G+ +I  S + +++NISFIS+IS+MGLVYLA
Sbjct: 341 FPQTQNKLQNIVDLVMWRDIPKSALMFGIGSFIIISSSYTQDLNISFISVISYMGLVYLA 400

Query: 241 AIFVHSSIFSRGNGKGIDSDDEHCVV-EEEVIRLVRGFVPFVNELLQNLKPLFHGDPSAT 300
           AIF++ SI  RG    ++ D+ +CVV EEE I L++  +P++NE L  L+ LF GDPS T
Sbjct: 401 AIFLYRSILCRGV---VEIDESNCVVGEEEAIWLLKLVLPYLNEFLLKLRALFSGDPSTT 460

Query: 301 LKMGVLLFVLAKWGSFITFWNILQCGFVAVFTLPKLFT--------HGEHWLRLCGSSWQ 360
           +KM VLLFVLA+ GS IT W + + GF  VF +PKL T        +G+ W+     +W+
Sbjct: 461 MKMAVLLFVLARCGSSITIWKMAKLGFFGVFIVPKLCTSYSHQLTAYGKFWIGRFRDAWE 520

Query: 361 LSSHKKGMIVAIFLMVWNFSSILYRVWAAFIAFVSFRYYRESLGRDGWVKNGE 405
             +HKK + + +F +VWN  S L R+WAAF+ FV+ RYY++ +  D W++  E
Sbjct: 521 SCTHKKAVAMVLFTLVWNLCSTLARIWAAFMLFVALRYYQQKM-TDEWMEKEE 569

[Close]
BLAST of CmoCh12G011720 vs. TrEMBL
Match: A0A068URL0_COFCA (Reticulon-like protein OS=Coffea canephora GN=GSCOC_T00030875001 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.0e-50
Identity = 130/362 (35.91%), Postives = 195/362 (53.87%), Query Frame = 1 

Query: 64  DEGFNSIQIAEEKP----ESPSSGDEQNRKTPIPSRRLRSNNSPNKPVRITERNSTRKKI 123
           +EG   I++  EK     +  S  +++ +K  +  ++ R +N   +P+ I          
Sbjct: 335 EEGDQEIEVEIEKTSLVVKEISVAEQKPKKVVVEEKKFRQSNE--RPMSIP--------- 394

Query: 124 DQSRKSAVGITKPPTNTNGIRKISPDKTVSSPPPQDFFDAFEEIKNESFDVKEINFPAQE 183
                S V    PP  ++   ++ P  T   P P +F  +                    
Sbjct: 395 -----SLVKKQSPPVVSHA--RVHPSPTKKRPIPDEFRGS-------------------- 454

Query: 184 IFPGNKQKLQRLMDLIMWREFSRSAMAFGAGNLVIALSYFIKNMNISFISMISHMGLVYL 243
             P  + KLQ ++DL+MWR+ S+SA  FG G  +I  S + K++NIS IS++S++GL+YL
Sbjct: 455 --PRTRSKLQSIVDLVMWRDASKSAFVFGIGTFIIISSSYAKDLNISAISVLSYLGLIYL 514

Query: 244 AAIFVHSSIFSRGNGKGIDSDDEHCVVEEEVIRLVRGFVPFVNELLQNLKPLFHGDPSAT 303
           AAIF+  S+ SRG     DS  ++ V EEE + LV+  +P VNE L  +K LF GDP+ T
Sbjct: 515 AAIFLFRSLISRGAVDLDDSSTDYVVGEEEAVWLVKLILPCVNEFLLKIKALFSGDPATT 574

Query: 304 LKMGVLLFVLAKWGSFITFWNILQCGFVAVFTLPK--------LFTHGEHWLRLCGSSWQ 363
           +KM +LLFVLA+ GS IT W +++ GF  VFT+PK        L  +G  W+R    +W+
Sbjct: 575 MKMALLLFVLARCGSSITIWKMVKLGFFGVFTVPKVCSSYSTQLTAYGVFWIRRFRDAWE 634

Query: 364 LSSHKKGMIVAIFLMVWNFSSILYRVWAAFIAFVSFRYYRESLGRDGWVKNGEAARHNDT 414
             SHKK +  AIF +VWN SSI+ R+WA F+ FV++RYY+ S   +GW    E  R  D+
Sbjct: 635 SCSHKKAVAFAIFTLVWNLSSIVARIWAVFMLFVAYRYYQPSFIGEGWATAEEQTRAEDS 656

[Close]
BLAST of CmoCh12G011720 vs. TAIR10
Match: AT5G58000.1 (AT5G58000.1 Reticulon family protein)

HSP 1 Score: 193.4 bits (490), Expect = 3.0e-49
Identity = 127/356 (35.67%), Postives = 195/356 (54.78%), Query Frame = 1 

Query: 59  KTWKSDEGFNSIQIAEEKPESPSSGDEQNRKTPIPSRRLRSNNSPNKPVRITERNSTR-- 118
           K+ ++++  N  Q   ++ +    GDE+        R +   +   K + + + N     
Sbjct: 113 KSNENEQIDNGDQEIGDQDDYEEDGDEEEE------REVEKKSVDVKEINVAKENRVGGV 172

Query: 119 --KKIDQSRKSAVGITKPPTNTNGIRKISPD-----KTVSSPPPQDFFDAFEEIKNESFD 178
             KK  Q +      T P  + + +RKISP       +V S PP            + F 
Sbjct: 173 EIKKFSQFQNR----TSP--SPSSVRKISPPVIKRATSVYSAPPNS------TSSTDRFA 232

Query: 179 VKEINFPAQEIFPGNKQKLQRLMDLIMWREFSRSAMAFGAGNLVIALSYFIKNMNISFIS 238
            +E NF   +       KLQ L+DL+MWR+ SRS + FG G  +I  S +  ++N SFIS
Sbjct: 233 EQEDNFTHSQ------SKLQSLVDLVMWRDVSRSTLVFGFGTFLIISSSYANDLNFSFIS 292

Query: 239 MISHMGLVYLAAIFVHSSIFSRGNGKGIDSDDEHCVV---EEEVIRLVRGFVPFVNELLQ 298
           ++++MGL+YL  +FV  S+  RG    +  ++ H VV   EE+V R++R  +P++NE L 
Sbjct: 293 VVAYMGLIYLGLMFVLKSLIHRG----MVEEERHKVVGVREEDVKRMLRLIMPYLNESLH 352

Query: 299 NLKPLFHGDPSATLKMGVLLFVLAKWGSFITFWNILQCGFVAVFTLPKLF--------TH 358
            L+ LF GDPS TLKMGV+LFVLA+ GS IT WN+ + GF+  FT+PK+F         +
Sbjct: 353 QLRALFSGDPSTTLKMGVVLFVLARCGSSITLWNLAKFGFLGAFTIPKIFISYSTHFSAY 412

Query: 359 GEHWLRLCGSSWQLSSHKKGMIVAIFLMVWNFSSILYRVWAAFIAFVSFRYYRESL 395
           G  W+R    +W+  +HKK + +A+F +VWN SS+  RVWAAF+  V+FRYY+  +
Sbjct: 413 GNFWMRRFRDAWESCNHKKAVALALFTLVWNLSSVTARVWAAFMLLVAFRYYQHKM 440

[Close]
BLAST of CmoCh12G011720 vs. TAIR10
Match: AT2G20590.1 (AT2G20590.1 Reticulon family protein)

HSP 1 Score: 120.2 bits (300), Expect = 3.2e-27
Identity = 89/301 (29.57%), Postives = 140/301 (46.51%), Query Frame = 1 

Query: 102 SPNKPVRITERNSTRKKIDQSRKSAVGITKPPTNTNGIRKISPDKTVSSPPPQDFFDAFE 161
           SP  P R   R+   ++ + +      +  PP       +   DK  S+PP     D   
Sbjct: 96  SPRNPRRSRRRSEAVEEKEANLVIEEIVKLPPRKRKTNGRPKKDKQSSAPPLCSSSDLPN 155

Query: 162 EIKNESFDVKEINFPAQEIFPGNKQKLQRLMDLIMWREFSRSAMAFGAGNLVIALSYFIK 221
             +++   + EI                 + DL+MWR+ ++S + FG G L    S F K
Sbjct: 156 TCQSDLNLIGEI-----------------ISDLVMWRDVAKSTLWFGFGCLSFLSSCFAK 215

Query: 222 NMNISFISMISHMGLVYLAAIFVHSSIFSRGNGKGIDSDDEHCVVEEEVIRLVRGFVPFV 281
            +N S  S +S++GLV L   F+ +++  R N    D+     V E++V+R  R  +P  
Sbjct: 216 GVNFSVFSAVSNLGLVLLCGSFLSNTLCQRKNE---DTKRAFHVSEDDVLRSARRVLPAT 275

Query: 282 NELLQNLKPLFHGDPSATLKMGVLLFVLAKWGSFITFWNILQCGFVAVFTLPKLFTHGEH 341
           N  +     LF G+PS TLK+   L + A++G  IT W +   GF   FT+PKL++   H
Sbjct: 276 NFFISKTSELFSGEPSMTLKVTPFLLLGAEYGHLITLWRLSAFGFFLSFTIPKLYSCYTH 335

Query: 342 WL--------RLCGSSWQLSSHKKGMIVAIFLMVWNFSSILYRVWAAFIAFVSFRYYRES 395
            +           G +W + SHKK +  +     WN +SI  R++A FI  V FRY R++
Sbjct: 336 QISQKVERVKTRIGEAWGVCSHKKILAGSAVTAFWNLTSIRTRIFAVFIILVIFRYRRQN 376

[Close]
BLAST of CmoCh12G011720 vs. TAIR10
Match: AT4G28430.1 (AT4G28430.1 Reticulon family protein)

HSP 1 Score: 108.6 bits (270), Expect = 9.7e-24
Identity = 69/230 (30.00%), Postives = 120/230 (52.17%), Query Frame = 1 

Query: 178 QEIFPGNKQKL-QRLMDLIMWREFSRSAMAFGAGNLVIALSYFI-KNMNISFISMISHMG 237
           Q++  G+ +++ + + DLIMWR+ ++S + FG G +    + F  K  N S  S IS++G
Sbjct: 181 QDVCQGDLERIRENISDLIMWRDVAKSTLWFGFGCICFLSTCFAAKGFNFSVFSAISYLG 240

Query: 238 LVYLAAIFVHSSIFSRGNGKGIDSDDEHCVVEEEVIRLVRGFVPFVNELLQNLKPLFHGD 297
           L++L   F+ +++  R      ++  E  + E++V+R+ R  +P  N  +     LF G+
Sbjct: 241 LLFLGVSFLSNTLRQRVTE---EARRELKLSEDDVLRIARRMLPITNLAISKTSELFSGE 300

Query: 298 PSATLKMGVLLFVLAKWGSFITFWNILQCGFVAVFTLPKLFTHGEHWL--------RLCG 357
           P+ TLK+   + + A++G  IT W +   GF   FT+PKL++     L        R   
Sbjct: 301 PAMTLKVAPFVLMGAEYGYLITLWRLCAFGFFLSFTIPKLYSCYASQLNQKVECAQRRFV 360

Query: 358 SSWQLSSHKKGMIVAIFLMVWNFSSILYRVWAAFIAFVSFRYYRESLGRD 398
            +W + +HKK +  +     WN +S+  R  A FI  V  RY R++L  D
Sbjct: 361 EAWGVCTHKKFVAGSAVTAFWNLTSLKTRFIAVFIIVVVIRYRRQNLQLD 407

[Close]
BLAST of CmoCh12G011720 vs. NCBI nr
Match: gi|659070755|ref|XP_008456496.1| (PREDICTED: reticulon-like protein B21 [Cucumis melo])

HSP 1 Score: 584.3 bits (1505), Expect = 1.7e-163
Identity = 321/442 (72.62%), Postives = 353/442 (79.86%), Query Frame = 1 

Query: 1   MDLSRRRAAVA-RGNVVAGSVWESRIRFDEVRGGIRVFNGDDETVECRVP-----AATVG 60
           MDLSRRRAAVA RGNVVAGSVWESRIRFDEVRGGI+VFNGDDE  EC VP     AA  G
Sbjct: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDENAECGVPTTAASAAAGG 60

Query: 61  SARRKTWKSDEGFNSIQIAEEKPE-SPSSGDEQNRKTPIPSRRLRSNNSPNKPVRI---- 120
           S RRKTWKSDEGFN I IAEEKPE SPSSGDEQ+RK+P PSRRLRSN SPNKPV++    
Sbjct: 61  SGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNGSPNKPVQVSGEK 120

Query: 121 TERNSTRKKIDQSRKSAVGITKPPTNTNGIRKISPDKT-----------VSSPPPQDFFD 180
           TERNSTRKK DQSRKS VG+TKPP  TNGI K S +K+           +SS   QDFFD
Sbjct: 121 TERNSTRKKTDQSRKSVVGLTKPP--TNGIGKTSSEKSFKELNECKEKVISSSTSQDFFD 180

Query: 181 AF-EEIKNESFDVKEINFPAQ-----EIFPGNKQKLQRLMDLIMWREFSRSAMAFGAGNL 240
           AF EEI+ ESFDVKEIN P +     + FPGNKQKLQ LMDLIMWR+FSRS + FG GNL
Sbjct: 181 AFEEEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNL 240

Query: 241 VIALSYFIKNMNISFISMISHMGLVYLAAIFVHSSIFSRGNGKGIDSDDEHCVVEEE-VI 300
           VI LS FIKN+NISFIS+ISHMGL+YL AIFVHSSIF  G  K IDSDDE+ VVEEE +I
Sbjct: 241 VIILSCFIKNINISFISLISHMGLLYLTAIFVHSSIF--GRRKRIDSDDENFVVEEEDMI 300

Query: 301 RLVRGFVPFVNELLQNLKPLFHGDPSATLKMGVLLFVLAKWGSFITFWNILQCGFVAVFT 360
           R  +  VPFVNELLQNLK LF GD SAT+K+GVLLFVLAKWGSFIT WN+L+ GF+ VFT
Sbjct: 301 RFAKRSVPFVNELLQNLKALFRGDSSATMKVGVLLFVLAKWGSFITLWNVLKIGFIGVFT 360

Query: 361 LPKLFTHGEHWLRLCGSSWQLSSHKKGMIVAIFLMVWNFSSILYRVWAAFIAFVSFRYYR 414
           LPKL THGEHWL+LCGSSW+L SHK+G+ VAIF +VWNFSS LYRVWAAFI  VSFRYY+
Sbjct: 361 LPKLITHGEHWLKLCGSSWKLCSHKRGVFVAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQ 420

[Close]
BLAST of CmoCh12G011720 vs. NCBI nr
Match: gi|449442977|ref|XP_004139257.1| (PREDICTED: reticulon-like protein B18 [Cucumis sativus])

HSP 1 Score: 583.6 bits (1503), Expect = 2.9e-163
Identity = 316/439 (71.98%), Postives = 355/439 (80.87%), Query Frame = 1 

Query: 1   MDLSRRRAAVA-RGNVVAGSVWESRIRFDEVRGGIRVFNGDDETVECRVP--AATVGSAR 60
           MDLSRRRAAVA +GNVVAGSVWESRIRFDEVRGGI+VFNGDDE VEC +P  AA+ GS R
Sbjct: 1   MDLSRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIPTTAASAGSGR 60

Query: 61  RKTWKSDEGFNSIQIAEEKPE-SPSSGDEQNRKTPIPSRRLRSNNSPNKPVRIT----ER 120
           RKTWKSDEGFN I IAEEKPE SPSSGDEQ+RK+P PSRRLRSN+SPNKPV+++    ER
Sbjct: 61  RKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEKIER 120

Query: 121 NSTRKKIDQSRKSAVGITKPPTNTNGIRKISPDKT-----------VSSPPPQDFFDAF- 180
           NSTRKK DQSRKSAVG+TKPP  TNGI K S +K+           +SS   QDFFDAF 
Sbjct: 121 NSTRKKTDQSRKSAVGLTKPP--TNGIGKTSSEKSFKESNECREKVISSSTSQDFFDAFE 180

Query: 181 EEIKNESFDVKEINFPAQ-----EIFPGNKQKLQRLMDLIMWREFSRSAMAFGAGNLVIA 240
           EEI+ ESFDVKEIN P +     + FPGNKQKLQ LMDLIMWR+FSRS + FG GNLVI 
Sbjct: 181 EEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVII 240

Query: 241 LSYFIKNMNISFISMISHMGLVYLAAIFVHSSIFSRGNGKGIDSDDEHCVVEEE-VIRLV 300
           LS FIKN+NIS IS+ISHMGL+YL  IFVHSSIF  G  K IDS+DE+ VVEEE +IR  
Sbjct: 241 LSCFIKNINISLISLISHMGLLYLTTIFVHSSIF--GRRKRIDSNDENLVVEEEDMIRFA 300

Query: 301 RGFVPFVNELLQNLKPLFHGDPSATLKMGVLLFVLAKWGSFITFWNILQCGFVAVFTLPK 360
           +  VPFVNELLQNLK LF GDPSAT+K+GVLLFVLAKWGSFIT WN+L+ GF+ VFTLPK
Sbjct: 301 KRLVPFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKIGFIGVFTLPK 360

Query: 361 LFTHGEHWLRLCGSSWQLSSHKKGMIVAIFLMVWNFSSILYRVWAAFIAFVSFRYYRESL 414
           L THGEHWL+LCGSSW+L SHK+G+ +AIF +VWNFSS LYRVWAAFI  VSFRYY+ES 
Sbjct: 361 LITHGEHWLKLCGSSWKLCSHKRGVFIAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESP 420

[Close]
BLAST of CmoCh12G011720 vs. NCBI nr
Match: gi|568870011|ref|XP_006488206.1| (PREDICTED: reticulon-like protein B21 [Citrus sinensis])

HSP 1 Score: 211.1 bits (536), Expect = 3.9e-51
Identity = 111/236 (47.03%), Postives = 156/236 (66.10%), Query Frame = 1 

Query: 177 AQEIFPGN--KQKLQRLMDLIMWREFSRSAMAFGAGNLVIALSYFIKNMNISFISMISHM 236
           A + FP    K KLQ L+DL+MWR+ S+SA  FG G  +I  S +  ++NISFIS+IS++
Sbjct: 323 AYQSFPETQTKSKLQNLVDLVMWRDVSKSAFVFGIGTFIIISSSYATDLNISFISVISYL 382

Query: 237 GLVYLAAIFVHSSIFSRGNGKGIDSDDEHCVV-EEEVIRLVRGFVPFVNELLQNLKPLFH 296
           GL+YLA IF++ +I  RG    ID DD   V+ E E I L++  +P++NE L  LK LF 
Sbjct: 383 GLIYLAVIFLYRAIICRG---VIDIDDSSYVLGEGEAIWLLKLILPYLNEFLLKLKALFS 442

Query: 297 GDPSATLKMGVLLFVLAKWGSFITFWNILQCGFVAVFTLPK--------LFTHGEHWLRL 356
           GDP+ T+K+ VLLFVLA+ GS IT W +++ GF  VF +PK        L  +G+ W+R 
Sbjct: 443 GDPATTMKLAVLLFVLARCGSSITIWKMIKVGFFGVFIVPKVCSSYSTQLAAYGKFWIRR 502

Query: 357 CGSSWQLSSHKKGMIVAIFLMVWNFSSILYRVWAAFIAFVSFRYYRESLGRDGWVK 402
              +W   SHKK + V IF +VWN SS++ R+WAAF+ FV+ RYY++S+ RD WV+
Sbjct: 503 FRDAWDSCSHKKAVAVGIFTLVWNLSSMIARIWAAFMLFVALRYYQQSMIRDDWVE 555

[Close]
BLAST of CmoCh12G011720 vs. NCBI nr
Match: gi|567864066|ref|XP_006424682.1| (hypothetical protein CICLE_v10028046mg [Citrus clementina])

HSP 1 Score: 211.1 bits (536), Expect = 3.9e-51
Identity = 111/236 (47.03%), Postives = 156/236 (66.10%), Query Frame = 1 

Query: 177 AQEIFPGN--KQKLQRLMDLIMWREFSRSAMAFGAGNLVIALSYFIKNMNISFISMISHM 236
           A + FP    K KLQ L+DL+MWR+ S+SA  FG G  +I  S +  ++NISFIS+IS++
Sbjct: 324 AYQSFPETQTKSKLQNLVDLVMWRDVSKSAFVFGIGTFIIISSSYATDLNISFISVISYL 383

Query: 237 GLVYLAAIFVHSSIFSRGNGKGIDSDDEHCVV-EEEVIRLVRGFVPFVNELLQNLKPLFH 296
           GL+YLA IF++ +I  RG    ID DD   V+ E E I L++  +P++NE L  LK LF 
Sbjct: 384 GLIYLAVIFLYRAIICRGI---IDIDDSSYVLGEGEAIWLLKLILPYLNEFLLKLKALFS 443

Query: 297 GDPSATLKMGVLLFVLAKWGSFITFWNILQCGFVAVFTLPK--------LFTHGEHWLRL 356
           GDP+ T+K+ VLLFVLA+ GS IT W +++ GF  VF +PK        L  +G+ W+R 
Sbjct: 444 GDPATTMKLAVLLFVLARCGSSITIWKMIKVGFFGVFIVPKVCSSYSTQLAAYGKFWIRR 503

Query: 357 CGSSWQLSSHKKGMIVAIFLMVWNFSSILYRVWAAFIAFVSFRYYRESLGRDGWVK 402
              +W   SHKK + V IF +VWN SS++ R+WAAF+ FV+ RYY++S+ RD WV+
Sbjct: 504 FRDAWDSCSHKKAVAVGIFTLVWNLSSMIARIWAAFMLFVALRYYQQSMIRDDWVE 556

[Close]
BLAST of CmoCh12G011720 vs. NCBI nr
Match: gi|645275766|ref|XP_008242972.1| (PREDICTED: reticulon-like protein B21 [Prunus mume])

HSP 1 Score: 210.3 bits (534), Expect = 6.7e-51
Identity = 118/265 (44.53%), Postives = 164/265 (61.89%), Query Frame = 1 

Query: 149 SSPPPQDFFDAFEEIKNESFDVKEINFPAQEIFPGNKQKLQRLMDLIMWREFSRSAMAFG 208
           S+ P Q  F A  E  N +             F     +LQ L+DLIMW++ SRS   FG
Sbjct: 375 SNIPKQTSFAASNEYHNHTS------------FQETHSRLQSLVDLIMWKDISRSVFVFG 434

Query: 209 AGNLVIALSYFIKNMNISFISMISHMGLVYLAAIFVHSSIFSRGNGKGIDSDDEHCVV-E 268
            G  VI  S + K++NISFIS+IS+MGL+YL AIF+  SI  RG    ++ D+ + VV E
Sbjct: 435 MGAFVILSSSYTKDLNISFISVISYMGLLYLGAIFLFKSIICRG---AVEVDNANYVVGE 494

Query: 269 EEVIRLVRGFVPFVNELLQNLKPLFHGDPSATLKMGVLLFVLAKWGSFITFWNILQCGFV 328
           EE + L++  +P++NELL  +K LF GDP+ T+K+ VLLFVLA+ GS IT W + + GF 
Sbjct: 495 EEAMWLLKLVLPYLNELLLKMKALFSGDPATTIKLAVLLFVLARCGSSITIWTMSKVGFF 554

Query: 329 AVFTLPK--------LFTHGEHWLRLCGSSWQLSSHKKGMIVAIFLMVWNFSSILYRVWA 388
            VFTLPK        L  + + W+R    +W+  +HKK + VAIFL+VWN SS++ R+WA
Sbjct: 555 GVFTLPKVCSLYSAQLTVYAKFWIRRFRDAWESCTHKKALTVAIFLLVWNLSSVVARIWA 614

Query: 389 AFIAFVSFRYYRESLGRDGWVKNGE 405
           AFI  V+FRYY++ L  + WV+  E
Sbjct: 615 AFILVVAFRYYQQKLVTEEWVEEEE 624

The following BLAST results are available for this feature:
BLAST of CmoCh12G011720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RTNLS_ARATH5.3e-4835.67Reticulon-like protein B21 OS=Arabidopsis thaliana GN=RTNLB21 PE=2 SV=2[more]
RTNLQ_ARATH5.7e-2629.57Reticulon-like protein B17 OS=Arabidopsis thaliana GN=RTNLB17 PE=2 SV=1[more]
RTNLR_ARATH1.7e-2230.00Reticulon-like protein B18 OS=Arabidopsis thaliana GN=RTNLB18 PE=2 SV=2[more]
BLAST of CmoCh12G011720 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LG57_CUCSA2.0e-16371.98Reticulon-like protein OS=Cucumis sativus GN=Csa_2G009500 PE=4 SV=1[more]
V4SBM5_9ROSI2.7e-5147.03Reticulon-like protein OS=Citrus clementina GN=CICLE_v10028046mg PE=4 SV=1[more]
M5VUB7_PRUPE4.7e-5139.87Reticulon-like protein OS=Prunus persica GN=PRUPE_ppa002580mg PE=4 SV=1[more]
A0A0D2SI09_GOSRA8.0e-5145.92Reticulon-like protein OS=Gossypium raimondii GN=B456_013G216600 PE=4 SV=1[more]
A0A068URL0_COFCA1.0e-5035.91Reticulon-like protein OS=Coffea canephora GN=GSCOC_T00030875001 PE=4 SV=1[more]
BLAST of CmoCh12G011720 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58000.13.0e-4935.67 Reticulon family protein[more]
AT2G20590.13.2e-2729.57 Reticulon family protein[more]
AT4G28430.19.7e-2430.00 Reticulon family protein[more]
BLAST of CmoCh12G011720 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659070755|ref|XP_008456496.1|1.7e-16372.62PREDICTED: reticulon-like protein B21 [Cucumis melo][more]
gi|449442977|ref|XP_004139257.1|2.9e-16371.98PREDICTED: reticulon-like protein B18 [Cucumis sativus][more]
gi|568870011|ref|XP_006488206.1|3.9e-5147.03PREDICTED: reticulon-like protein B21 [Citrus sinensis][more]
gi|567864066|ref|XP_006424682.1|3.9e-5147.03hypothetical protein CICLE_v10028046mg [Citrus clementina][more]
gi|645275766|ref|XP_008242972.1|6.7e-5144.53PREDICTED: reticulon-like protein B21 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003388Reticulon
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G011720.1CmoCh12G011720.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003388ReticulonPFAMPF02453Reticuloncoord: 192..338
score: 3.5
IPR003388ReticulonPROFILEPS50845RETICULONcoord: 191..336
score: 14
NoneNo IPR availablePANTHERPTHR10994RETICULONcoord: 68..401
score: 1.9
NoneNo IPR availablePANTHERPTHR10994:SF84RETICULON-LIKE PROTEIN B21coord: 68..401
score: 1.9