ClCG02G017090 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG02G017090
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Reticulon-like protein
Location	CG_Chr02 : 31581059 .. 31588170 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAGAGAGAGAGAGAGAGAGGAAATTCCAGAATCAGTCCCACCTCCTTCTCAACTTGCCACTTACCATTTGGCATCATAAAAACAAAATTCTCTGTTCTGTTCACCGCCAGAGGGATTCTCTTCTTTTCTTCTTCTGTCCGCCATTGTTGCTCTGCTCCAAAGCTTCGAGCCCGTTCAGAACAGCCAGAGGGAAGTGGGATTTTGGCTCTTTTCTTTTTCTTCTTTCCCATTTCGTCATTTTTAAATCTTCAGATTGATTCGCCGGAGGGTTTTTTTTCGTTTTCTTTTTTGGGTTCCGGTAGACGTCGGCGATGGATTTGAGCCGGCGGAGGGCGGCGGTGGCGGCGAGGGGGAACGTGGTTGCAGGGTCTGTGTGGGAGAGCAGAATCAGATTCGATGAAGTCAGAGGTGGGATTAAGGTTTTTAATGGAGATGACGATAATGCTGAATGCACGCTTCCGGGCGCCGTCGCCGCTGCTGCTGGCGGCAGCGGAAGGAGGAAAACGTGGAAATCCGATGAGGGTTTTAACCCGATTCTCATCGCGGAGGAAAAACCAGAGTCGTCGCCGAGTAGCGGCGATGAACAGAGTCGGAAAAGCCCGATTCCGGCGCGGAGATTGAGATCCAACGGCAGCCCAAACAAGCCAGTTCAAATTTCCGGCGAGAAAACAGAGAGAAACTCGACGAGGAAGAAGACCGATCATTCTCGTAAATCGGCCGTCGGGTTTGCCAAACCGGCGACGAACGGAATCGGAAAAACCCCGCCAGAGAAAAGTTTCAAAGAGTTAAATGAATGCAGAGATAAAGTGATTTCATCTTCCCCATCTCAAGATTTCTTCGATGCATTTGAAGAAGAGATTGAGAAAGAAAGCTTCGATGTTAAGGAAATTAATTTACCAGAACGGAAGAAAATCGTCGCAAAAACTTTCCCGGGAAACAAACAGAAACTACAAACACTAAGTGAGAAAACTTCCCTTCAAATCCCAAATTTCCATTTCCATTTCCCTCTAATTCATTTTTCTTGAAATCTTTGGTGTTTTCCAGTGGATTTGATAATGTGGAGAGATCTTTCAAGATCCGCTCTGGTTTTTGGATTGGGAAATTTGGTTATAATCCTCTCTTATTTTATCAAGAACATCAATATCAGGTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTCCAAATCCGCCATTGTTGAGGGTAAAAGAAGAAAATGGGTTGTTGAGTTTTTGTGTGTTTTTGCAGCTTTGTCAGTTTGATTTCGCATATGGGTCTTCTTTATCTGGCTGCCATTTTCGTCCATAGGTCCATTTTTGGCAGGTGATGATCTTAATGGGTTTTCTTTTCTTCATAATTAGCTTCTGAGAAATAATTGAGAAGAAGATTTCTGATTTTCTATTTGATTTTGCCGGGAAAATTTACAGGAGAAAAGGGTTTGATTCTGATGATGAAAATTTTGCTGTTGAAGAAGAAGATATGATTCGATTTGCTAAACGGTTAGTTCCTTTCGTGAATGAATTGCTGCAATATCTCAAGGCTCTGTTCCGTGGAGATCCTTCCGCAACCGTGAAGGTATTTTCTTTTTTCTTTTTAATGACCAAATTACTTTCGAAATAGTTTTCTGATATTTAAAATTATTATATTTTAATTATATCAATTCCACTAATAAGCTTTCATCAATTTTCAATATTAATCTTAATAAAGATTTTAAATTAATTCACCTAATTTTGTTTTTCTTCTTCGAATTATCAAACTTTGAGGTGGTGGTGGTGGTGGTTATACAATTGGGCTTCTAAAAGATGGTTAGATTAGAGTGGAGCATTTTAAAAAAATTAATGCCAAAGATTTAATAATGTAGAAGAAACGAAATGGACAATAAGGTTTGAAGGCCATTTTATTAGAAAAATTGATTCACATTCTTACCCATGACGCTATTGGGAATAGTTATTTGGCATTTAGAGAAATATATATATATATATTTCAATAGATTGGGTTGGTGATTTCTATTCGAGTGTCGGTCATATATATTATTAAAATTTTATTGGAAGCTGTGAGAATGATCATATTTAACCACATGAAATGCATTTTTTTCTTTAAAAAATAAAAAAAAAAATAGCTCGACTAGAAATTGAAAGCTCTAATTTAAGATGTTTTAAAAAATTGAAACAAGGTCTACATGGATCAATTGCTCTCTCACAACCTCATTATAAATGAGAGGAGAATACTATTTTTTTTTTAAAAAAACATCTTTCTAGATGGATGTTGAAGGCATGATTGAATGAGTTATTTTGTTATTTCAACAAAAAAAAAAATATATTTTAAATGATAAAATTGTAGATATATATTCAAATATATATAATGATGAATAATATTAGTTTATTATGACATTTTATTATAATATTAAATAATTTAAAAAAATAATCTTCCTCATTGAGACTCCAATAATCATTATGTAATATAAAATCTAACCATTAAACCCACATCAAAAGTAATGCAACTAAACCAAACAGGCAAGTGTTAATTTCAAATTCATTTTGGAATGCTTAAACTAGTTTAAATAACCTAACTTTATTGGAAAGGCTTTAATATTTGAAGGATAAATCAAACTTTTCAAATTTTATAAACCAAAAAGAAAAGAAAAATGATTTTGGTTTAGGTAGTATTAAATACATTTTTTCCCCTATTGAGTTATGAAATTAATGAGTAATTTGAAAATGATAATTGGTAGGTTATTCATTTAATTGAAGAAATTATGTTTGTATTATATTACATAATATTGTTTGGTCATGTGATGTGTAGGTGGGTGTATTGCTGTTTGTGTTGGCAAAGTGGGGTAGCTTCATCACTCTTTGGAATGTCCTAAAAATTGGTAATTTTTTTTTTTTTTTTAATTTAAAATTTTTATTCTCTATTATTCACCCCTCCAATCTGTTTTTCTTTTCCATGTCTTTTCAAAAACTTAATCCATGCCATCAAATCTACTTTTTTAGAACTACTATTTTAGTCCCTATCTTTGCCTTCACTTAACATAAATGTCTAAAGGGAATAAATAGTTTTTAATACTTATCTCAGTAATTAGTATATATACTAGTTTCCCTTCATTTTTTGTTTATGCATGTATTTTTTCCAATTCTAGTTTTAAGCTGTTTTTGTCCAATGTACTTTCTAAACTCCCATTGTACTTTCTAACTTGGTTATTTTCATTTTTATTTCCATTCTTATTTTCTATTATCCATATAGATTTTGGGTTATATTATCTTGAACATTTCCTAAACGCTTCAAAGCTATTGTTAGATAATATAATTAAACTTACCTTTGCTCGTTGGCTTAAGTTTTTGAGTCAATCGTGATTTAATATGGTATCAGGATATCCTGTGTTCAAACCGCTACATTGTTGTTTTCTCCCCAATCCTATTGTTAGAGCAAAAATCTTTTGAAATTTTGAGAAAATTTTTGTTGAATTGAAGTTTGTGACCTTGAACAGGTGGTGTCCTCAATTTTTGTTATTTGTCCCAACCACACAAGAGGTCACAATTATTGAGGATAGTTTTGAAATATTTATAAAAAGATAAGAGTAATCCTAATTATTTTGAACAATAAACAAGTAGTAGATACTAAATTTAAGATTTATTGAAATTACAGAATTAAAATTTGACATTTAAAATTATAAAGACTAAAATTGAAAATGATATTTTTTTAAAAAAAATTAGAATAGTTATATATATATATATATTTTTTTTTTTCTTTTTGTGGTTTATGTATTTGTTAATTGTTTTTGTATTTTTGGTTCTGACAAATGGATGGTACTGATTTGACTGACACAGGATTTGTTGGTGTTTTCACACTGCCCAAATTTATTACCCACGGTAAAAATATATCTCCAATGACTTTTACTTTTTTACTTTTCTTTCTTTTGTTCCTCTATTATTGTTATTGTAATTTTTGTTTGGTGGATACGTCTAGTCGTGGTTAGAATTGAATACGGTCGAGTACAACAAAACACCGTAGCTCTGTCTTTTGGTGCGTCGATTTGTTTGACCGTGTCCCACATCATCCAGACCGTCCTTTTGTCCCTTCAAATAACGGCTACGTTTCCACCTTCACATCACATCACAATTCACAAACTAAAATTCCATAATTCCTTTTTTGACCCCAAAAATTGAACAAATATTAAAAAGAGGACTTTCTTTTACTCATTTTAGACGTCACCTGGGCCCCACGGCAACCTTCACGAGATGGTTTCAGAGATTTTGTTTTAGTTTTTTCAATGCTAATTTTTGGGAAAAAGAAATTAATTTAATTTTCTTTGTCGGTGATTTCTTTTCTTTCCATAGGTTTTCTTGTCGGATGGTGTGGTTGGATCCTCTTTTTTTCATCATCTTTTTTCCGACAGTATTTTGTCCTCTAAATGTTCTTTTTTTATTTTTTATAAAAAAAGAAAATTTTATTTTGATTCCTCCGACTTTTAAGTTTTTGTTTCAACAGTGTCTAATTGGTTACTTTGTTTTTAACTTTCTGTATCTAAGAATTTTTTTTAAAAATTTTATTGATTTGTTAGATATATTGAATTCTACTTTTAATACAATGAGAAACTCTCAATTTCGTGCCTAACCAATTTTATTTTTTTATTTTTTTTATTTTTTTATTTATAGAGTTATTGACTTATTAGTCACAAAATTAAAAATTTTTATAGGTTAAGAGCTTATAAACCTGCATGTGAAAGTTTGATGATTGTTGTCTAATTCTCTTTTGATGAACTTGTTTCTATATTTTTATTTATCCTTAAAGTATTGGAATTTGAACCTTTGACTTCTAAGATAAATGTATTTAAAGAAAATAATGTTTATCAATTTAGTTAGGCTAAATTATAAAAAATGCTTTTGAACTTTGTACTTTGTGTAAAAAATAAGTTTTAACTTTCAAAAGTTTCAAAAATACCCTCAAACTTATAAAAAAAAAGGGTTAAAAAATTCCCTTCCAGTTAGTTTTGGATTGAAACTGTTAATGTTTTGTTTAAAAATACCTTTAAACTTAAAAAAGATAAATATAAAAAAAAGAATATACTTACTGTTAGTATATGAATATAACTCGTTAGTACCATGTTGCAAAAATAACTCTAAAATTACAACAAAAAAAAAAAAATGCTTGTACCGTTAGTATAGTGATCAATTTGTTTGAAGTGTTCTAGAGTTCAAAGAGAACCAATTCTAAAATAAATTATATATATATATATATTTTTTAATCGAAATTTTAAGTTTGAACATAAAATTTCACACAGTTCCAAAATTAATATCTTTGTTTAAAACATACCAAAATGTTAAATAGTCAAATAAAATAAATTGTATTTGTCTAATCAACGAACAATTTTCTTGGTGCTTTCATTATTTTCTATTTTCTTATTATAGTCCTTTTACATTAATTGAAGTGAGCTATTTATTAATTTAATTTTTTTAGATAAACAAATGTGAAATTGTTAAAAAAGAATTGTTAAAAAAGAAAAAAAAAAGTGTTAGATGATATAATTCAATTTGCCTTCATTCATCAACTTACGGTTTTGGGTCAATCGACGATTTAACAAAGAGGGAAATAAAGAGGAGAGAAGATAAAAAGGGAGAATTGAGAAGTAATAGGCTATTAATGCTTTTTACTCATATATGGGGTATCTTTGAACTTTATTTTAAGTCTAAAGATATTTTTGAAACTTTTGAAAGTCCAGAGATATTTTTGACATTTTTTAACTCCTTTTGAAAGTTATTTTTGAAACTTTGAAAGTTCAAGGATATTTTTAGTACAAAGTATAAAGTATTAGAGTATTTTGTATAATTTAGCCTTTTAGTTATCTTTTCTTCTTTCAACTTGTTAGGTCTCTTTCATTCTCTTAAAAAACGGGAGTTGCTACTTAGCATGTAAGCCCATAGGGGTGGGCTGTCTCAGACCACCATGTGACCCCTCTTTTAGCCACTACCTAACTTTTGAGAGTAATTGCTTGGCCTTCTAACCTAAGGGACTACCCTTCACAAGTCTTTGCTATATGAAAACTTTAATTTTGGATTTAACCTACCTTAACTCATCACTTATGAAACTCTCTTTTATACTTTATATTAACTCCAAGTTTCTAAATTCATTTCTCTTATATTATCTAAATTTAGGTTACACTAATACAACCTCTCATTTTTAGCCTAGTTCATATTGCGAGGCAAATATTTCTTTTAAGTTTGTGTAACACAAGACTATTATAAAATCAAGTTATTTTGTTAATCTAGCACATTAGAAACTCATGAAACTCACCTTTTGTACTACCAAAATGAAAAATTCCATGGGTGCTTCTTTTATAGTGCTTGGAGTCTATCATTTCTTGAACCTTTTTGATGTGGGACAACTAGTCTTCTAATATTTTGCCAAAATCCAATGTGTTTTAAGAGTGTAAATGATGTTGTAGTGTTCTCTTTTGTGAAATTAGGTGAACAGTGGTTGAAACTTTGTGGGAGTTCTTGGAAGTTATGCTCCCACAAGAAGAGTGTGGCTGTTGCCATCTTCTTTCTTGTATGGAATTTCTCATCAATTCTATATCGCGTATGGGCAGGTAACCCTTTCGAACTTAAAACTCGATCTTTAGATTGTCAATTGATTTTCGAAAAACATAGTTTGAACGTGGTTCATCACTGAATGAAATGAAAACAGGAGAGAGTGACAGCATTAGATAACATGTTTAATATTGAAATTGGAAGTATGATTTTGGCAGCTTTCATAGTGTTCGTCAGCTTTCGACACTACCAGGAGTCTTCAGAGAGAGATGTTTGGGTTAAAAATCGTGAAGTAGGTCCAAGAAACGACACCGTTTCAGTAAGTTCAAAGCTCAAGAGACAATATTGAACAATTTTTTGAGGTTCTTTTTCTCTGCTTTTTTTGAGATAGTTAAAAATTACCATGTAAATTCATGCACACTATGGTAGAAATCCATCTTGTATCTTAAGAGGAAAAAAATCAGAAATGTTTTTTTTTTTTTCTTTCTTTTCCCTACCTTCAAAATCAATAATGTTGGGGCGTAGCAAAATTTTTTTATTGATCGCCATTGTTGCATACAAGACTTATAATAAACGATTACCG

mRNA sequence

GAGAGAGAGAGAGAGAGAGAGGAAATTCCAGAATCAGTCCCACCTCCTTCTCAACTTGCCACTTACCATTTGGCATCATAAAAACAAAATTCTCTGTTCTGTTCACCGCCAGAGGGATTCTCTTCTTTTCTTCTTCTGTCCGCCATTGTTGCTCTGCTCCAAAGCTTCGAGCCCGTTCAGAACAGCCAGAGGGAAGTGGGATTTTGGCTCTTTTCTTTTTCTTCTTTCCCATTTCGTCATTTTTAAATCTTCAGATTGATTCGCCGGAGGGTTTTTTTTCGTTTTCTTTTTTGGGTTCCGGTAGACGTCGGCGATGGATTTGAGCCGGCGGAGGGCGGCGGTGGCGGCGAGGGGGAACGTGGTTGCAGGGTCTGTGTGGGAGAGCAGAATCAGATTCGATGAAGTCAGAGGTGGGATTAAGGTTTTTAATGGAGATGACGATAATGCTGAATGCACGCTTCCGGGCGCCGTCGCCGCTGCTGCTGGCGGCAGCGGAAGGAGGAAAACGTGGAAATCCGATGAGGGTTTTAACCCGATTCTCATCGCGGAGGAAAAACCAGAGTCGTCGCCGAGTAGCGGCGATGAACAGAGTCGGAAAAGCCCGATTCCGGCGCGGAGATTGAGATCCAACGGCAGCCCAAACAAGCCAGTTCAAATTTCCGGCGAGAAAACAGAGAGAAACTCGACGAGGAAGAAGACCGATCATTCTCGTAAATCGGCCGTCGGGTTTGCCAAACCGGCGACGAACGGAATCGGAAAAACCCCGCCAGAGAAAAGTTTCAAAGAGTTAAATGAATGCAGAGATAAAGTGATTTCATCTTCCCCATCTCAAGATTTCTTCGATGCATTTGAAGAAGAGATTGAGAAAGAAAGCTTCGATGTTAAGGAAATTAATTTACCAGAACGGAAGAAAATCGTCGCAAAAACTTTCCCGGGAAACAAACAGAAACTACAAACACTAATGGATTTGATAATGTGGAGAGATCTTTCAAGATCCGCTCTGCTTTGTCAGTTTGATTTCGCATATGGGTCTTCTTTATCTGGCTGCCATTTTCGTCCATAGGTCCATTTTTGGCAGGAGAAAAGGGTTTGATTCTGATGATGAAAATTTTGCTGTTGAAGAAGAAGATATGATTCGATTTGCTAAACGGTTAGTTCCTTTCGTGAATGAATTGCTGCAATATCTCAAGGCTCTGTTCCGTGGAGATCCTTCCGCAACCGTGAAGGTGGGTGTATTGCTGTTTGTGTTGGCAAAGTGGGGTAGCTTCATCACTCTTTGGAATGTCCTAAAAATTGGATTTGTTGGTGTTTTCACACTGCCCAAATTTATTACCCACGGTGAACAGTGGTTGAAACTTTGTGGGAGTTCTTGGAAGTTATGCTCCCACAAGAAGAGTGTGGCTGTTGCCATCTTCTTTCTTGTATGGAATTTCTCATCAATTCTATATCGCGTATGGGCAGCTTTCATAGTGTTCGTCAGCTTTCGACACTACCAGGAGTCTTCAGAGAGAGATGTTTGGGTTAAAAATCGTGAAGTAGGTCCAAGAAACGACACCGTTTCAGTAAGTTCAAAGCTCAAGAGACAATATTGAACAATTTTTTGAGGTTCTTTTTCTCTGCTTTTTTTGAGATAGTTAAAAATTACCATGTAAATTCATGCACACTATGGTAGAAATCCATCTTGTATCTTAAGAGGAAAAAAATCAGAAATGTTTTTTTTTTTTTCTTTCTTTTCCCTACCTTCAAAATCAATAATGTTGGGGCGTAGCAAAATTTTTTTATTGATCGCCATTGTTGCATACAAGACTTATAATAAACGATTACCG

Coding sequence (CDS)

ATGGATTTGAGCCGGCGGAGGGCGGCGGTGGCGGCGAGGGGGAACGTGGTTGCAGGGTCTGTGTGGGAGAGCAGAATCAGATTCGATGAAGTCAGAGGTGGGATTAAGGTTTTTAATGGAGATGACGATAATGCTGAATGCACGCTTCCGGGCGCCGTCGCCGCTGCTGCTGGCGGCAGCGGAAGGAGGAAAACGTGGAAATCCGATGAGGGTTTTAACCCGATTCTCATCGCGGAGGAAAAACCAGAGTCGTCGCCGAGTAGCGGCGATGAACAGAGTCGGAAAAGCCCGATTCCGGCGCGGAGATTGAGATCCAACGGCAGCCCAAACAAGCCAGTTCAAATTTCCGGCGAGAAAACAGAGAGAAACTCGACGAGGAAGAAGACCGATCATTCTCGTAAATCGGCCGTCGGGTTTGCCAAACCGGCGACGAACGGAATCGGAAAAACCCCGCCAGAGAAAAGTTTCAAAGAGTTAAATGAATGCAGAGATAAAGTGATTTCATCTTCCCCATCTCAAGATTTCTTCGATGCATTTGAAGAAGAGATTGAGAAAGAAAGCTTCGATGTTAAGGAAATTAATTTACCAGAACGGAAGAAAATCGTCGCAAAAACTTTCCCGGGAAACAAACAGAAACTACAAACACTAATGGATTTGATAATGTGGAGAGATCTTTCAAGATCCGCTCTGCTTTGTCAGTTTGATTTCGCATATGGGTCTTCTTTATCTGGCTGCCATTTTCGTCCATAG

Protein sequence

MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDDNAECTLPGAVAAAAGGSGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPIPARRLRSNGSPNKPVQISGEKTERNSTRKKTDHSRKSAVGFAKPATNGIGKTPPEKSFKELNECRDKVISSSPSQDFFDAFEEEIEKESFDVKEINLPERKKIVAKTFPGNKQKLQTLMDLIMWRDLSRSALLCQFDFAYGSSLSGCHFRP

Homology

[Close]

BLAST of ClCG02G017090 vs. TrEMBL
Match: A0A0A0LG57_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_2G009500 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 8.2e-109
Identity = 201/231 (87.01%), Postives = 211/231 (91.34%), Query Frame = 1


Query: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDDNAECTLPGAVAAAAGGS 60
           MDLSRRRAAVAA+GNVVAGSVWESRIRFDEVRGGIKVFNGDD+N EC +P    AA+ GS
Sbjct: 1   MDLSRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIP--TTAASAGS 60

Query: 61  GRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPIPARRLRSNGSPNKPVQISGEKT 120
           GRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSP P+RRLRSN SPNKPVQ+SGEK 
Sbjct: 61  GRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEKI 120

Query: 121 ERNSTRKKTDHSRKSAVGFAKPATNGIGKTPPEKSFKELNECRDKVISSSPSQDFFDAFE 180
           ERNSTRKKTD SRKSAVG  KP TNGIGKT  EKSFKE NECR+KVISSS SQDFFDAFE
Sbjct: 121 ERNSTRKKTDQSRKSAVGLTKPPTNGIGKTSSEKSFKESNECREKVISSSTSQDFFDAFE 180

Query: 181 EEIEKESFDVKEINLPERKKIVAKTFPGNKQKLQTLMDLIMWRDLSRSALL 232
           EEIEKESFDVKEINLPERKKI+A+TFPGNKQKLQTLMDLIMWRD SRS L+
Sbjct: 181 EEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLV 229

[Close]

BLAST of ClCG02G017090 vs. TrEMBL
Match: W9SFN6_9ROSA (Reticulon-like protein OS=Morus notabilis GN=L484_009984 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 6.5e-21
Identity = 85/239 (35.56%), Postives = 116/239 (48.54%), Query Frame = 1


Query: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDDNAECTLPGAVAAAAGGS 60
           MD+ +RR  + +   VVAGSVWESR++ DEVRGGIKVFNG++   +             +
Sbjct: 1   MDVGKRRVGLRS-SVVVAGSVWESRMKHDEVRGGIKVFNGEESPEKQDQENVAKPKRPPA 60

Query: 61  GRRKTWKSD--EGF--NPILIAEEKPESSPSSGD---------EQSRKSPIPARRLRSNG 120
            +RKTWKS+  EGF  NPI IA  K E   +S +         E ++KSP+  RR RS G
Sbjct: 61  AKRKTWKSETLEGFEKNPIQIARGKSEEKKNSDEQVKEMSISVEGNKKSPVQPRRRRSEG 120

Query: 121 SPNKPVQISGEKTERNSTRKKTDHSRKSAVGFAKPATNGIGKTPPEK-----------SF 180
             NK + I   ++ R    K      K +V   K     I K+P EK           + 
Sbjct: 121 --NKEIGI--RRSPRTELAKPKSDVVKVSVEENKDVVEEIEKSPVEKKSEEIGSESDEAC 180

Query: 181 KELNECRDKVISSS---------------PSQDFFDAFEEEIEKESFDVKEINLPERKK 201
           KE   C +KVISSS                 ++  +  E E+EK+S +VKEI  P  +K
Sbjct: 181 KEFGVCEEKVISSSVEDSKSEPKDDDERESEEEIGEEIEVEVEKKSIEVKEIEKPIEEK 234

[Close]

BLAST of ClCG02G017090 vs. TrEMBL
Match: A0A022R2B2_ERYGU (Reticulon-like protein OS=Erythranthe guttata GN=MIMGU_mgv1a004061mg PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-17
Identity = 91/302 (30.13%), Postives = 137/302 (45.36%), Query Frame = 1


Query: 4   SRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNG-------------------DDDN 63
           SRRR +        AGSVWE+R++ D+V+GG KVFN                    D+  
Sbjct: 16  SRRRGSAPK-----AGSVWETRMKLDQVKGGFKVFNETPDLENNNTTTVNNPEIQMDNKK 75

Query: 64  AECTLPGAVAAAAGGSGRRKTWKSD--EGFNPILIAEEKPESSPSSGDEQS--------- 123
            E         + G SG+RKTWKSD  EG +P+ IA ++ +S+ +S DE S         
Sbjct: 76  TENARAKQSPTSVGVSGKRKTWKSDNSEG-SPVQIARKRSDSTKNS-DESSKELTFSGDG 135

Query: 124 ----RKSPIPARRLRSNGSPNKPVQISGEKTERNSTRKKTDHSRKSAVGFAKPA----TN 183
               +K+P+  ++ RS+      +++   K+E +    K +    +AVG   PA      
Sbjct: 136 VVGIKKTPVLIKKTRSSAE----IELRKVKSEPSDGESKAE----TAVGDGMPADKNPIG 195

Query: 184 GIGK--------TPPEKSFKELNECRDKVISSS-------PSQDFFDAFEE-----EIEK 232
           GIG+            +S +E   C +K I+S        PS D+ D  E+     E+EK
Sbjct: 196 GIGEKKTLTLIGVKKSRSDEEFGVCEEKSITSDVGPAKIPPSDDYIDDDEDEDMEIEVEK 255

[Close]

BLAST of ClCG02G017090 vs. TrEMBL
Match: A0A151R6T5_CAJCA (Reticulon-like protein OS=Cajanus cajan GN=KK1_040557 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.9e-17
Identity = 78/225 (34.67%), Postives = 115/225 (51.11%), Query Frame = 1


Query: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDDNAECTLPGAVAAAAGGS 60
           M++ +RR  V  RG+VVAGSVWESR++ DEVRGGIKVFN ++   E      V  +  G 
Sbjct: 1   MEVGKRRVGV--RGSVVAGSVWESRMKSDEVRGGIKVFNAEESPEE-NAAARVKRSPIGC 60

Query: 61  GRRKTWKSDEGFNPILIAE------EKPESSPSSGDEQSRKSPIPARRLRSNGSPNKPVQ 120
           G+RKTWKS+   +PI   +      + P    ++  +   +SP+  R+LRS         
Sbjct: 61  GKRKTWKSE---SPIQCKDSSDGIKKSPIRKIAAFADNFERSPVHTRKLRSE------TH 120

Query: 121 ISGEKTERNS---TRKKTDHSRKSA---VGFAKPATNGI-----GKTPPEKSFKELNECR 180
            SGE  ERNS    + K+D  +K+A   +   K  ++       G    E S +   +  
Sbjct: 121 KSGEPDERNSPQLRKSKSDSIKKNASCSIQLRKTKSDTSENVVQGSESEELSVQVGGDSD 180

Query: 181 DKVISSSPSQDFFDAFEEEI----EKESFDVKEINLPERKKIVAK 205
           D ++  +  ++  +  E EI    EKE  DVKEI++PE K  V K
Sbjct: 181 DVIVDEADEEEDEEEVEVEIEIEMEKERIDVKEISIPESKFEVVK 213

[Close]

BLAST of ClCG02G017090 vs. TrEMBL
Match: A0A151R6T5_CAJCA (Reticulon-like protein OS=Cajanus cajan GN=KK1_040557 PE=4 SV=1)

HSP 1 Score: 42.4 bits (98), Expect = 9.7e-01
Identity = 20/37 (54.05%), Postives = 28/37 (75.68%), Query Frame = 1


Query: 204 KTFPGNKQKLQTLMDLIMWRDLSRSALLCQFDFAYGS 241
           ++FP  + KLQ+L+DLIMWRD+SRSA    F F +G+
Sbjct: 309 RSFPQTQSKLQSLVDLIMWRDVSRSA----FVFGFGT 341

HSP 2 Score: 96.3 bits (238), Expect = 5.7e-17
Identity = 91/304 (29.93%), Postives = 136/304 (44.74%), Query Frame = 1


Query: 4   SRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNG-------------------DDDN 63
           SRRR +        AGSVWE+R++ D+V+GG KVFN                    D+  
Sbjct: 16  SRRRGSAPK-----AGSVWETRMKLDQVKGGFKVFNETPDLENNNTTTVNNPEIQMDNKK 75

Query: 64  AECTLPGAVAAAAGGSGRRKTWKSD--EGFNPILIAEEKPESSPSSGDEQS--------- 123
            E         + G SG+RKTWKSD  EG +P+ IA ++ +S+ +S DE S         
Sbjct: 76  TENARAKQSPTSVGVSGKRKTWKSDNSEG-SPVQIARKRSDSTKNS-DESSKELTFSGDG 135

Query: 124 ----RKSPIPARRLRSNGSPNKPVQISGEKTERNSTRKKTDHSRKSAVGFAKPA----TN 183
               +K+P+  ++ RS+      +++   K+E +    K +    +AVG   PA      
Sbjct: 136 VVGIKKTPVLIKKTRSSAE----IELRKVKSEPSDGESKAE----TAVGDGMPADKNPIG 195

Query: 184 GIGK--------TPPEKSFKELNECRDKVISSS-------PSQDFFDAFEE-----EIEK 232
           GIG+            +S +E   C +K I+S        PS D+ D  E+     E+EK
Sbjct: 196 GIGEKKTLTLIGVKKSRSDEEFGVCEEKSITSDVGPAKIPPSDDYIDDDEDEDMEIEVEK 255

[Close]

BLAST of ClCG02G017090 vs. NCBI nr
Match: gi|659070755|ref|XP_008456496.1| (PREDICTED: reticulon-like protein B21 [Cucumis melo])

HSP 1 Score: 412.9 bits (1060), Expect = 3.9e-112
Identity = 207/232 (89.22%), Postives = 217/232 (93.53%), Query Frame = 1


Query: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDDNAECTLPG-AVAAAAGG 60
           MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDD+NAEC +P  A +AAAGG
Sbjct: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDENAECGVPTTAASAAAGG 60

Query: 61  SGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPIPARRLRSNGSPNKPVQISGEK 120
           SGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSP P+RRLRSNGSPNKPVQ+SGEK
Sbjct: 61  SGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNGSPNKPVQVSGEK 120

Query: 121 TERNSTRKKTDHSRKSAVGFAKPATNGIGKTPPEKSFKELNECRDKVISSSPSQDFFDAF 180
           TERNSTRKKTD SRKS VG  KP TNGIGKT  EKSFKELNEC++KVISSS SQDFFDAF
Sbjct: 121 TERNSTRKKTDQSRKSVVGLTKPPTNGIGKTSSEKSFKELNECKEKVISSSTSQDFFDAF 180

Query: 181 EEEIEKESFDVKEINLPERKKIVAKTFPGNKQKLQTLMDLIMWRDLSRSALL 232
           EEEIEKESFDVKEINLPERKKI+A+TFPGNKQKLQTLMDLIMWRD SRS L+
Sbjct: 181 EEEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLV 232

[Close]

BLAST of ClCG02G017090 vs. NCBI nr
Match: gi|449442977|ref|XP_004139257.1| (PREDICTED: reticulon-like protein B18 [Cucumis sativus])

HSP 1 Score: 401.4 bits (1030), Expect = 1.2e-108
Identity = 201/231 (87.01%), Postives = 211/231 (91.34%), Query Frame = 1


Query: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDDNAECTLPGAVAAAAGGS 60
           MDLSRRRAAVAA+GNVVAGSVWESRIRFDEVRGGIKVFNGDD+N EC +P    AA+ GS
Sbjct: 1   MDLSRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIP--TTAASAGS 60

Query: 61  GRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPIPARRLRSNGSPNKPVQISGEKT 120
           GRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSP P+RRLRSN SPNKPVQ+SGEK 
Sbjct: 61  GRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEKI 120

Query: 121 ERNSTRKKTDHSRKSAVGFAKPATNGIGKTPPEKSFKELNECRDKVISSSPSQDFFDAFE 180
           ERNSTRKKTD SRKSAVG  KP TNGIGKT  EKSFKE NECR+KVISSS SQDFFDAFE
Sbjct: 121 ERNSTRKKTDQSRKSAVGLTKPPTNGIGKTSSEKSFKESNECREKVISSSTSQDFFDAFE 180

Query: 181 EEIEKESFDVKEINLPERKKIVAKTFPGNKQKLQTLMDLIMWRDLSRSALL 232
           EEIEKESFDVKEINLPERKKI+A+TFPGNKQKLQTLMDLIMWRD SRS L+
Sbjct: 181 EEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLV 229

[Close]

BLAST of ClCG02G017090 vs. NCBI nr
Match: gi|703152328|ref|XP_010110376.1| (Reticulon-like protein [Morus notabilis])

HSP 1 Score: 109.4 bits (272), Expect = 9.3e-21
Identity = 85/239 (35.56%), Postives = 116/239 (48.54%), Query Frame = 1


Query: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDDNAECTLPGAVAAAAGGS 60
           MD+ +RR  + +   VVAGSVWESR++ DEVRGGIKVFNG++   +             +
Sbjct: 1   MDVGKRRVGLRS-SVVVAGSVWESRMKHDEVRGGIKVFNGEESPEKQDQENVAKPKRPPA 60

Query: 61  GRRKTWKSD--EGF--NPILIAEEKPESSPSSGD---------EQSRKSPIPARRLRSNG 120
            +RKTWKS+  EGF  NPI IA  K E   +S +         E ++KSP+  RR RS G
Sbjct: 61  AKRKTWKSETLEGFEKNPIQIARGKSEEKKNSDEQVKEMSISVEGNKKSPVQPRRRRSEG 120

Query: 121 SPNKPVQISGEKTERNSTRKKTDHSRKSAVGFAKPATNGIGKTPPEK-----------SF 180
             NK + I   ++ R    K      K +V   K     I K+P EK           + 
Sbjct: 121 --NKEIGI--RRSPRTELAKPKSDVVKVSVEENKDVVEEIEKSPVEKKSEEIGSESDEAC 180

Query: 181 KELNECRDKVISSS---------------PSQDFFDAFEEEIEKESFDVKEINLPERKK 201
           KE   C +KVISSS                 ++  +  E E+EK+S +VKEI  P  +K
Sbjct: 181 KEFGVCEEKVISSSVEDSKSEPKDDDERESEEEIGEEIEVEVEKKSIEVKEIEKPIEEK 234

[Close]

BLAST of ClCG02G017090 vs. NCBI nr
Match: gi|1009109867|ref|XP_015892572.1| (PREDICTED: reticulon-like protein B21 [Ziziphus jujuba])

HSP 1 Score: 104.0 bits (258), Expect = 3.9e-19
Identity = 76/175 (43.43%), Postives = 97/175 (55.43%), Query Frame = 1


Query: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDDNAECT---------LPG 60
           MD+ RRRA      +VVAGSVWESR++ DEVRGGIKVFNG++++ E              
Sbjct: 1   MDVGRRRAGAGT--SVVAGSVWESRMKHDEVRGGIKVFNGEENSEESNGISAGSKLKRGQ 60

Query: 61  AVAAAAGGSGRRKTWKSDEGF--NPILIAEEKPESSPSSGDEQS----------RKSPIP 120
           A A A   SG+RKTWKS E F  NPI IA+ K E SP + +EQ           +KSPI 
Sbjct: 61  AAAGAVSASGKRKTWKS-ESFEKNPIQIAKGKTE-SPRNSEEQCKELSVSVDGLKKSPIQ 120

Query: 121 ARRLRSNGSPNKPVQISGEKTERN--STRKKTDHSRKSAVGFAKPA---TNGIGK 150
            R+LRS GS  K + ++ +K ER+    RK    S KS     K A     G+G+
Sbjct: 121 VRKLRSEGS--KEIGVASDKAERSPVGIRKARSESLKSPGNLGKEAGESGEGVGR 169

[Close]

BLAST of ClCG02G017090 vs. NCBI nr
Match: gi|1009109867|ref|XP_015892572.1| (PREDICTED: reticulon-like protein B21 [Ziziphus jujuba])

HSP 1 Score: 41.6 bits (96), Expect = 2.4e+00
Identity = 47/184 (25.54%), Postives = 68/184 (36.96%), Query Frame = 1


Query: 50  PGAVAAAAGGSGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPIPARRLRSNGSP 109
           PG +   AG SG        EG     I   K +S      EQS K          N   
Sbjct: 153 PGNLGKEAGESG--------EGVGRNSIQLRKAKSDSIKVQEQSNKD---------NDGS 212

Query: 110 NKPVQISGEKTERNSTRKKTDHSRKSAVGFAKPATNGIGKTPPEKSFKELNECRDKVISS 169
              +Q+   K+E      +++   + +    +     IGK+  +++ KE   C+DKVIS+
Sbjct: 213 GAAIQLGKTKSEPIKDLVESEKGVEESNEEIEKNPVEIGKSGSDETCKEFGVCQDKVISN 272

Query: 170 ----------------SPSQDFFDAFEEE------------------IEKESFDVKEINL 200
                             + D+ D  EEE                  IEK+S D+KEIN 
Sbjct: 273 GESNVDLHNSAPKAVVDDNDDYGDDQEEEEVEEELGEEIDEVEIEIEIEKKSLDIKEINT 319

HSP 2 Score: 37.7 bits (86), Expect = 3.4e+01
Identity = 14/28 (50.00%), Postives = 22/28 (78.57%), Query Frame = 1


Query: 204 KTFPGNKQKLQTLMDLIMWRDLSRSALL 232
           +TFP +  +LQ+ +DLIMW+D+SRS  +
Sbjct: 419 RTFPESHNRLQSFVDLIMWKDISRSVFI 446

HSP 3 Score: 101.3 bits (251), Expect = 2.5e-18
Identity = 82/214 (38.32%), Postives = 107/214 (50.00%), Query Frame = 1


Query: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDDNAECTLPGAVAAA---- 60
           MD+ RR++ V      VAGSVWESR++ D+V+GG+KVFNGD DNAE T    V AA    
Sbjct: 1   MDVGRRKSGV------VAGSVWESRMKVDQVKGGVKVFNGDQDNAEETSTNGVTAATRXR 60

Query: 61  -----AGG-----SGRRKTWKSD--EGF--NPILIAEEKPESSPSSGDEQS--------- 120
                AGG     SG+RKTWKS+  EG   +PI I++ K ES  +S DEQ          
Sbjct: 61  LKRAPAGGGGAASSGKRKTWKSETFEGSEKSPIQISKGKTESVKNS-DEQCKELSVSVDG 120

Query: 121 -RKSPIPARRLRSNGSPNKPVQISGEKTERNSTRKKTDHSRKSAVGFAKPATNGIGKTPP 180
            RKSP   RRLRS G+  K + +S EK ER            S +G  KP    +  +  
Sbjct: 121 IRKSPAQLRRLRSEGT--KEIGVSAEKNER------------SPIGIRKPRRELLKSSSD 180

Query: 181 EKSFKELNECRDKVISSSPSQDFFDAFEEEIEKE 187
                E N  + + + S  S+   D     I+ E
Sbjct: 181 LGEGAERNSIQLRKVKSESSRGIDDPSGSAIQSE 193

The following BLAST results are available for this feature:

BLAST of ClCG02G017090 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG57_CUCSA	8.2e-109	87.01	Reticulon-like protein OS=Cucumis sativus GN=Csa_2G009500 PE=4 SV=1	[more]
W9SFN6_9ROSA	6.5e-21	35.56	Reticulon-like protein OS=Morus notabilis GN=L484_009984 PE=4 SV=1	[more]
A0A022R2B2_ERYGU	1.5e-17	30.13	Reticulon-like protein OS=Erythranthe guttata GN=MIMGU_mgv1a004061mg PE=4 SV=1	[more]
A0A151R6T5_CAJCA	1.9e-17	34.67	Reticulon-like protein OS=Cajanus cajan GN=KK1_040557 PE=4 SV=1	[more]
A0A151R6T5_CAJCA	9.7e-01	54.05	Reticulon-like protein OS=Cajanus cajan GN=KK1_040557 PE=4 SV=1	[more]

BLAST of ClCG02G017090 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659070755\|ref\|XP_008456496.1\|	3.9e-112	89.22	PREDICTED: reticulon-like protein B21 [Cucumis melo]	[more]
gi\|449442977\|ref\|XP_004139257.1\|	1.2e-108	87.01	PREDICTED: reticulon-like protein B18 [Cucumis sativus]	[more]
gi\|703152328\|ref\|XP_010110376.1\|	9.3e-21	35.56	Reticulon-like protein [Morus notabilis]	[more]
gi\|1009109867\|ref\|XP_015892572.1\|	3.9e-19	43.43	PREDICTED: reticulon-like protein B21 [Ziziphus jujuba]	[more]
gi\|1009109867\|ref\|XP_015892572.1\|	2.4e+00	25.54	PREDICTED: reticulon-like protein B21 [Ziziphus jujuba]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0044425	membrane part
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G017090.1	ClCG02G017090.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG02G017090	Csa2G009500	Cucumber (Chinese Long) v2	cuwcgB122
ClCG02G017090	MELO3C004426	Melon (DHL92) v3.5.1	mewcgB375
ClCG02G017090	Cla013614	Watermelon (97103) v1	wcgwmB197
ClCG02G017090	Cla97C02G042790	Watermelon (97103) v2	wcgwmbB138
ClCG02G017090	Bhi06G001543	Wax gourd	wcgwgoB263
ClCG02G017090	CSPI02G02520	Wild cucumber (PI 183967)	cpiwcgB128
ClCG02G017090	Cucsa.132850	Cucumber (Gy14) v1	cgywcgB218
ClCG02G017090	CmaCh12G011520	Cucurbita maxima (Rimu)	cmawcgB156
ClCG02G017090	CmaCh05G012340	Cucurbita maxima (Rimu)	cmawcgB695
ClCG02G017090	CmoCh05G012610	Cucurbita moschata (Rifu)	cmowcgB700
ClCG02G017090	CmoCh12G011720	Cucurbita moschata (Rifu)	cmowcgB144
ClCG02G017090	Lsi11G004030	Bottle gourd (USVL1VR-Ls)	lsiwcgB098
ClCG02G017090	Cp4.1LG11g10190	Cucurbita pepo (Zucchini)	cpewcgB104
ClCG02G017090	Cp4.1LG07g10860	Cucurbita pepo (Zucchini)	cpewcgB736
ClCG02G017090	CsGy2G002620	Cucumber (Gy14) v2	cgybwcgB119
ClCG02G017090	MELO3C004426.2	Melon (DHL92) v3.6.1	medwcgB369
ClCG02G017090	Carg23010	Silver-seed gourd	carwcgB1042
ClCG02G017090	Carg17443	Silver-seed gourd	carwcgB0245
ClCG02G017090	CsaV3_2G003680	Cucumber (Chinese Long) v3	cucwcgB137

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG02G017090	Cucurbita pepo (Zucchini)	cpewcgB733
ClCG02G017090	Wax gourd	wcgwgoB260