Cla013614 (gene) Watermelon (97103) v1

Overview
NameCla013614
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionReticulon-like protein B21 (AHRD V1 *-*- RTNLS_ARATH); contains Interpro domain(s) IPR003388 Reticulon
LocationChr2 : 27472432 .. 27475559 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTGAGCCGGCGGAGGGCGGCGGTGGCGGCGAGGGGGAACGTGGTTGCAGGGTCTGTGTGGGAGAGCAGAATCAGATTCGATGAAGTCAGAGGTGGGATTAAGGTTTTTAATGGAGATGACGATAATGCTGAATGCACGCTTCCGGGCGCCGTCGCCGCTGCTGCTGGCGGCAGCGGAAGGAGGAAAACGTGGAAATCCGATGAGGGTTTTAACCCGATTCTCATCGCGGAGGAAAAACCAGAGTCGTCGCCGAGTAGCGGCGATGAACAGAGTCGGAAAAGCCCGATTCCGGCGCGGAGATTGAGATCCAACGGCAGCCCAAACAAGCCAGTTCAAATTTCCGGCGAGAAAACAGAGAGAAACTCGACGAGGAAGAAGACCGATCATTCTCGTAAATCGGCCGTCGGGTTTGCCAAACCGGCGACGAACGGAATCGGAAAAACCCCGCCAGAGAAAAGTTTCAAAGAGTTAAATGAATGCAGAGATAAAGTGATTTCATCTTCCCCATCTCAAGATTTCTTCGATGCATTTGAAGAAGAGATTGAGAAAGAAAGCTTCGATGTTAAGGAAATTAATTTACCAGAACGGAAGAAAATCGTCGCAAAAACTTTCCCGGGAAACAAACAGAAACTACAAACACTAAGTGAGAAAACTTCCCTTCAAATCCCAAATTTCCATTTCCATTTCCCTCTAATTCATTTTTCTTGAAATCTTTGGTGTTTTCCAGTGGATTTGATAATGTGGAGAGATCTTTCAAGATCCGCTCTGGTTTTTGGATTGGGAAATTTGGTTATAATCCTCTCTTATTTTATCAAGAACATCAATATCAGGTAGCAAAAAAAAAAAAAAAAAAAAAAAAAAATTTCAAATCCGCCATTGTTGAGGGTAAAAGAAGAAAATGGGTTGTTGAGTTTTTGTGTGTTTTTGCAGCTTTGTCAGTTTGATTTCGCATATGGGTCTTCTTTATCTGGCTGCCATTTTCGTCCATAGGTCCATTTTTGGCAGGTGATGATCTTAATGGGTTTTCTTTTCTTCATAATTAGCTTCTGAGAAATAATTGAGAAGAAGATTTCTGATTTTCTATTTGATTTTGCCGGGAAAATTTACAGGAGAAAAGGGTTTGATTCTGATGATGAAAATTTTGCTGTTGAAGAAGAAGATATGATTCGATTTGCTAAACGGTTAGTTCCTTTCGTGAATGAATTGCTGCAATATCTCAAGGCTCTGTTCCGTGGAGATCCTTCCGCAACCGTGAAGGTATTTTCTTTTTTCTTTTTAATGACCAAATTACTTTCGAAATAGTTTTCTGATATTTAAAATTATTATATTTTAATTATATCAATTCCACTAATAAGCTTTCATCAATTTTCAATATTAATCTTAATAAAGATTTTAAATTAATTCACCTAATTTTGTTTTTCTTCTTCGAATTATCAAACTTTGAGGTGGTGGTGGTGGTGGTTATACAATTGGGCTTCTAAAAGATGGTTAGATTAGAGTGGAGCATTTTAAAAAAATTAATGCCAAAGATTTAATAATGTAGAAGAAACGAAATGGACAATAAGGTTTGAAGGCCATTTTATTAGAAAAATTGATTCACATTCTTACCCATGACGCTATTGGGAATAGTTATTTGGCATTTAGAGAAATATATATATATATATTTCAATAGATTGGGTTGGTGATTTCTATTCGAGTGTCGGTCATATATATTATTAAAATTTTATTGGAAGCTGTGAGAATGATCATATTTAACCACATGAAATGCATTTTTTTCTTTAAAAAATAAAAAAAAAAATAGCTCGACTAGAAATTGAAAGCTCTAATTTAAGATGTTTTAAAAAATTGAAACAAGGTCTACATGGATCAATTGCTCTCTCACAACCTCATTATAAATGAGAGGAGAATACTATTTTTTTTTTAAAAAAACATCTTTCTAGATGGATGTTGAAGGCATGATTGAATGAGTTATTTTGTTATTTCAACAAAAAAAAAAATATATTTTAAATGATAAAATTGTAGATATATATTCAAATATATATAATGATGAATAATATTAGTTTATTATGACATTTTATTATAATATTAAATAATTTAAAAAAATAATCTTCCTCATTGAGACTCCAATAATCATTATGTAATATAAAATCTAACCATTAAACCCACATCAAAAGTAATGCAACTAAACCAAACAGGCAAGTGTTAATTTCAAATTCATTTTGGAATGCTTAAACTAGTTTAAATAACCTAACTTTATTGGAAAGGCTTTAATATTTGAAGGATAAATCAAACTTTTCAAATTTTATAAACCAAAAAGAAAAGAAAAATGATTTTGGTTTAGGTAGTATTAAATACATTTTTTCCCCTATTGAGTTATGAAATTAATGAGTAATTTGAAAATGATAATTGGTAGGTTATTCATTTAATTGAAGAAATTATGTTTGTATTATATTACATAATATTGTTTGGTCATGTGATGTGTAGGTGGGTGTATTGCTGTTTGTGTTGGCAAAGTGGGGTAGCTTCATCACTCTTTGGAATGTCCTAAAAATTGGTAATTTTTTTTTTTTTTTTAATTTAAAATTTTTATTCTCTATTATTCACCCCTCCAATCTGTTTTTCTTTTCCATGTCTTTTCAAAAACTTAATCCATGCCATCAAATCTACTTTTTTAGAACTACTATTTTAGTCCCTATCTTTGCCTTCACTTAACATAAATGTCTAAAGGGAATAAATAGTTTTTAATACTTATCTCAGTAATTAGTATATATACTAGTTTCCCTTCATTTTTTGTTTATGCATGTATTTTTTCCAATTCTAGTTTTAAGCTGTTTTTGTCCAATGTACTTTCTAAACTCCCATTGTACTTTCTAACTTGGTTATTTTCATTTTTATTTCCATTCTTATTTTCTATTATCCATATAGATTTTGGGTTATATTATCTTGAACATTTCCTAAACGCTTCAAAGCTATTGTTAGATAATATAATTAAACTTACCTTTGCTCGTTGGCTTAAGTTTTTGAGTCAATCGTGATTTAATATGGTATCAGGATATCCTGTGTTCAAACCGCTACATTGTTGTTTTCTCCCCAATCCTATTGTTAGAGCAAAAATCTTTTGA

mRNA sequence

ATGGATTTGAGCCGGCGGAGGGCGGCGGTGGCGGCGAGGGGGAACGTGGTTGCAGGGTCTGTGTGGGAGAGCAGAATCAGATTCGATGAAGTCAGAGGTGGGATTAAGGTTTTTAATGGAGATGACGATAATGCTGAATGCACGCTTCCGGGCGCCGTCGCCGCTGCTGCTGGCGGCAGCGGAAGGAGGAAAACGTGGAAATCCGATGAGGGTTTTAACCCGATTCTCATCGCGGAGGAAAAACCAGAGTCGTCGCCGAGTAGCGGCGATGAACAGAGTCGGAAAAGCCCGATTCCGGCGCGGAGATTGAGATCCAACGGCAGCCCAAACAAGCCAGTTCAAATTTCCGGCGAGAAAACAGAGAGAAACTCGACGAGGAAGAAGACCGATCATTCTCGTAAATCGGCCGTCGGGTTTGCCAAACCGGCGACGAACGGAATCGGAAAAACCCCGCCAGAGAAAAGTTTCAAAGAGTTAAATGAATGCAGAGATAAAGTGATTTCATCTTCCCCATCTCAAGATTTCTTCGATGCATTTGAAGAAGAGATTGAGAAAGAAAGCTTCGATGTTAAGGAAATTAATTTACCAGAACGGAAGAAAATCGTCGCAAAAACTTTCCCGGGAAACAAACAGAAACTACAAACACTAATGGATTTGATAATGTGGAGAGATCTTTCAAGATCCGCTCTGGTTTTTGGATTGGGAAATTTGGTTATAATCCTCTCTTATTTTATCAAGAACATCAATATCAGCTTTGTCAGTTTGATTTCGCATATGGGTCTTCTTTATCTGGCTGCCATTTTCGTCCATAGGTCCATTTTTGGCAGGAGAAAAGGGTTTGATTCTGATGATGAAAATTTTGCTGTTGAAGAAGAAGATATGATTCGATTTGCTAAACGGTTAGTTCCTTTCGTGAATGAATTGCTGCAATATCTCAAGGCTCTGTTCCGTGGAGATCCTTCCGCAACCGTGAAGGTGGGTGTATTGCTGTTTGTGTTGGCAAAGTGGGGTAGCTTCATCACTCTTTGGAATGTCCTAAAAATTGGATATCCTGTGTTCAAACCGCTACATTGTTGTTTTCTCCCCAATCCTATTGTTAGAGCAAAAATCTTTTGA

Coding sequence (CDS)

ATGGATTTGAGCCGGCGGAGGGCGGCGGTGGCGGCGAGGGGGAACGTGGTTGCAGGGTCTGTGTGGGAGAGCAGAATCAGATTCGATGAAGTCAGAGGTGGGATTAAGGTTTTTAATGGAGATGACGATAATGCTGAATGCACGCTTCCGGGCGCCGTCGCCGCTGCTGCTGGCGGCAGCGGAAGGAGGAAAACGTGGAAATCCGATGAGGGTTTTAACCCGATTCTCATCGCGGAGGAAAAACCAGAGTCGTCGCCGAGTAGCGGCGATGAACAGAGTCGGAAAAGCCCGATTCCGGCGCGGAGATTGAGATCCAACGGCAGCCCAAACAAGCCAGTTCAAATTTCCGGCGAGAAAACAGAGAGAAACTCGACGAGGAAGAAGACCGATCATTCTCGTAAATCGGCCGTCGGGTTTGCCAAACCGGCGACGAACGGAATCGGAAAAACCCCGCCAGAGAAAAGTTTCAAAGAGTTAAATGAATGCAGAGATAAAGTGATTTCATCTTCCCCATCTCAAGATTTCTTCGATGCATTTGAAGAAGAGATTGAGAAAGAAAGCTTCGATGTTAAGGAAATTAATTTACCAGAACGGAAGAAAATCGTCGCAAAAACTTTCCCGGGAAACAAACAGAAACTACAAACACTAATGGATTTGATAATGTGGAGAGATCTTTCAAGATCCGCTCTGGTTTTTGGATTGGGAAATTTGGTTATAATCCTCTCTTATTTTATCAAGAACATCAATATCAGCTTTGTCAGTTTGATTTCGCATATGGGTCTTCTTTATCTGGCTGCCATTTTCGTCCATAGGTCCATTTTTGGCAGGAGAAAAGGGTTTGATTCTGATGATGAAAATTTTGCTGTTGAAGAAGAAGATATGATTCGATTTGCTAAACGGTTAGTTCCTTTCGTGAATGAATTGCTGCAATATCTCAAGGCTCTGTTCCGTGGAGATCCTTCCGCAACCGTGAAGGTGGGTGTATTGCTGTTTGTGTTGGCAAAGTGGGGTAGCTTCATCACTCTTTGGAATGTCCTAAAAATTGGATATCCTGTGTTCAAACCGCTACATTGTTGTTTTCTCCCCAATCCTATTGTTAGAGCAAAAATCTTTTGA

Protein sequence

MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDDNAECTLPGAVAAAAGGSGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPIPARRLRSNGSPNKPVQISGEKTERNSTRKKTDHSRKSAVGFAKPATNGIGKTPPEKSFKELNECRDKVISSSPSQDFFDAFEEEIEKESFDVKEINLPERKKIVAKTFPGNKQKLQTLMDLIMWRDLSRSALVFGLGNLVIILSYFIKNINISFVSLISHMGLLYLAAIFVHRSIFGRRKGFDSDDENFAVEEEDMIRFAKRLVPFVNELLQYLKALFRGDPSATVKVGVLLFVLAKWGSFITLWNVLKIGYPVFKPLHCCFLPNPIVRAKIF
Homology
[Close]
BLAST of Cla013614 vs. Swiss-Prot
Match: RTNLS_ARATH (Reticulon-like protein B21 OS=Arabidopsis thaliana GN=RTNLB21 PE=2 SV=2)

HSP 1 Score: 146.7 bits (369), Expect = 4.9e-34
Identity = 70/145 (48.28%), Postives = 102/145 (70.34%), Query Frame = 1 

Query: 206 FPGNKQKLQTLMDLIMWRDLSRSALVFGLGNLVIILSYFIKNINISFVSLISHMGLLYLA 265
           F  ++ KLQ+L+DL+MWRD+SRS LVFG G  +II S +  ++N SF+S++++MGL+YL 
Sbjct: 220 FTHSQSKLQSLVDLVMWRDVSRSTLVFGFGTFLIISSSYANDLNFSFISVVAYMGLIYLG 279

Query: 266 AIFVHRSIFGRRKGFDSDDENFAVEEEDMIRFAKRLVPFVNELLQYLKALFRGDPSATVK 325
            +FV +S+  R    +   +   V EED+ R  + ++P++NE L  L+ALF GDPS T+K
Sbjct: 280 LMFVLKSLIHRGMVEEERHKVVGVREEDVKRMLRLIMPYLNESLHQLRALFSGDPSTTLK 339

Query: 326 VGVLLFVLAKWGSFITLWNVLKIGY 351
           +GV+LFVLA+ GS ITLWN+ K G+
Sbjct: 340 MGVVLFVLARCGSSITLWNLAKFGF 364

[Close]
BLAST of Cla013614 vs. Swiss-Prot
Match: RTNLQ_ARATH (Reticulon-like protein B17 OS=Arabidopsis thaliana GN=RTNLB17 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.4e-19
Identity = 49/137 (35.77%), Postives = 78/137 (56.93%), Query Frame = 1 

Query: 214 QTLMDLIMWRDLSRSALVFGLGNLVIILSYFIKNINISFVSLISHMGLLYLAAIFVHRSI 273
           + + DL+MWRD+++S L FG G L  + S F K +N S  S +S++GL+ L   F+  ++
Sbjct: 166 EIISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSNTL 225

Query: 274 FGRRKGFDSDDENFAVEEEDMIRFAKRLVPFVNELLQYLKALFRGDPSATVKVGVLLFVL 333
             R+   +     F V E+D++R A+R++P  N  +     LF G+PS T+KV   L + 
Sbjct: 226 CQRKN--EDTKRAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLLG 285

Query: 334 AKWGSFITLWNVLKIGY 351
           A++G  ITLW +   G+
Sbjct: 286 AEYGHLITLWRLSAFGF 300

[Close]
BLAST of Cla013614 vs. Swiss-Prot
Match: RTNLR_ARATH (Reticulon-like protein B18 OS=Arabidopsis thaliana GN=RTNLB18 PE=2 SV=2)

HSP 1 Score: 95.1 bits (235), Expect = 1.7e-18
Identity = 70/284 (24.65%), Postives = 132/284 (46.48%), Query Frame = 1 

Query: 84  SSPSSGDEQSRKSPIPARRLRSNGSPNKPVQISGEKTERNSTRKKTDHSRKSAVGFAKPA 143
           SSP +  E    SP P R+ R+  S    ++ +  +    + R KT           K  
Sbjct: 60  SSPVTLREILLLSPSPLRKSRTRLSNRFDMEAA--EAAVTARRSKT-----------KGG 119

Query: 144 TNGIGKTPPEKSFKELNECRDKVISSSPSQDFFDAFEEEIEKESFDVKEINLPERKK--- 203
            NG+  +P  ++F+      + ++ +  + +      +E ++     K++   +++K   
Sbjct: 120 QNGLLASPSPRNFRRSRLRSEAMVDTKENTEPIVVVTDEKKQNQRKQKKLGRSKKEKHSS 179

Query: 204 --IVAKTFPGNKQKL-----------QTLMDLIMWRDLSRSALVFGLGNLVIILSYFI-K 263
             ++A   P + Q             + + DLIMWRD+++S L FG G +  + + F  K
Sbjct: 180 VPLLASPSPSSDQPQDVCQGDLERIRENISDLIMWRDVAKSTLWFGFGCICFLSTCFAAK 239

Query: 264 NINISFVSLISHMGLLYLAAIFVHRSIFGRRKGFDSDDENFAVEEEDMIRFAKRLVPFVN 323
             N S  S IS++GLL+L   F+  ++  R++  +       + E+D++R A+R++P  N
Sbjct: 240 GFNFSVFSAISYLGLLFLGVSFLSNTL--RQRVTEEARRELKLSEDDVLRIARRMLPITN 299

Query: 324 ELLQYLKALFRGDPSATVKVGVLLFVLAKWGSFITLWNVLKIGY 351
             +     LF G+P+ T+KV   + + A++G  ITLW +   G+
Sbjct: 300 LAISKTSELFSGEPAMTLKVAPFVLMGAEYGYLITLWRLCAFGF 328

[Close]
BLAST of Cla013614 vs. TrEMBL
Match: A0A0A0LG57_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_2G009500 PE=4 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 7.3e-170
Identity = 306/350 (87.43%), Postives = 320/350 (91.43%), Query Frame = 1 

Query: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDDNAECTLPGAVAAAAGGS 60
           MDLSRRRAAVAA+GNVVAGSVWESRIRFDEVRGGIKVFNGDD+N EC +P    AA+ GS
Sbjct: 1   MDLSRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIP--TTAASAGS 60

Query: 61  GRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPIPARRLRSNGSPNKPVQISGEKT 120
           GRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSP P+RRLRSN SPNKPVQ+SGEK 
Sbjct: 61  GRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEKI 120

Query: 121 ERNSTRKKTDHSRKSAVGFAKPATNGIGKTPPEKSFKELNECRDKVISSSPSQDFFDAFE 180
           ERNSTRKKTD SRKSAVG  KP TNGIGKT  EKSFKE NECR+KVISSS SQDFFDAFE
Sbjct: 121 ERNSTRKKTDQSRKSAVGLTKPPTNGIGKTSSEKSFKESNECREKVISSSTSQDFFDAFE 180

Query: 181 EEIEKESFDVKEINLPERKKIVAKTFPGNKQKLQTLMDLIMWRDLSRSALVFGLGNLVII 240
           EEIEKESFDVKEINLPERKKI+A+TFPGNKQKLQTLMDLIMWRD SRS LVFG+GNLVII
Sbjct: 181 EEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVII 240

Query: 241 LSYFIKNINISFVSLISHMGLLYLAAIFVHRSIFGRRKGFDSDDENFAVEEEDMIRFAKR 300
           LS FIKNINIS +SLISHMGLLYL  IFVH SIFGRRK  DS+DEN  VEEEDMIRFAKR
Sbjct: 241 LSCFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDENLVVEEEDMIRFAKR 300

Query: 301 LVPFVNELLQYLKALFRGDPSATVKVGVLLFVLAKWGSFITLWNVLKIGY 351
           LVPFVNELLQ LKALFRGDPSAT+KVGVLLFVLAKWGSFITLWNVLKIG+
Sbjct: 301 LVPFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKIGF 348

[Close]
BLAST of Cla013614 vs. TrEMBL
Match: W9SFN6_9ROSA (Reticulon-like protein OS=Morus notabilis GN=L484_009984 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.9e-53
Identity = 155/439 (35.31%), Postives = 223/439 (50.80%), Query Frame = 1 

Query: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDDNAECTLPGAVAAAAGGS 60
           MD+ +RR  + +   VVAGSVWESR++ DEVRGGIKVFNG++   +             +
Sbjct: 1   MDVGKRRVGLRS-SVVVAGSVWESRMKHDEVRGGIKVFNGEESPEKQDQENVAKPKRPPA 60

Query: 61  GRRKTWKSD--EGF--NPILIAEEKPESSPSSGD---------EQSRKSPIPARRLRSNG 120
            +RKTWKS+  EGF  NPI IA  K E   +S +         E ++KSP+  RR RS G
Sbjct: 61  AKRKTWKSETLEGFEKNPIQIARGKSEEKKNSDEQVKEMSISVEGNKKSPVQPRRRRSEG 120

Query: 121 SPNKPVQISGEKTERNSTRKKTDHSRKSAVGFAKPATNGIGKTPPEK-----------SF 180
             NK + I   ++ R    K      K +V   K     I K+P EK           + 
Sbjct: 121 --NKEIGI--RRSPRTELAKPKSDVVKVSVEENKDVVEEIEKSPVEKKSEEIGSESDEAC 180

Query: 181 KELNECRDKVISSS---------------PSQDFFDAFEEEIEKESFDVKEINLP----- 240
           KE   C +KVISSS                 ++  +  E E+EK+S +VKEI  P     
Sbjct: 181 KEFGVCEEKVISSSVEDSKSEPKDDDERESEEEIGEEIEVEVEKKSIEVKEIEKPIEEKP 240

Query: 241 --------------ERKKIVA-KTFPGNKQKLQTL------------------------- 300
                         ER+++     F   ++K + +                         
Sbjct: 241 NKFVSDCEVKKVNFERRQVKKFHQFQNQQKKAEPISLNVEKQPPVLRRATLHSSFVKGSP 300

Query: 301 -----MDLIMWRDLSRSALVFGLGNLVIILSYFIKNINISFVSLISHMGLLYLAAIFVHR 351
                MDLIMW+D+SRS  +FG+G   I+ S + K++NISF+S++S++GL+YLAAIF+  
Sbjct: 301 TKSPPMDLIMWKDISRSVFIFGIGTFTILSSSYTKDLNISFISVMSYLGLVYLAAIFLFT 360

[Close]
BLAST of Cla013614 vs. TrEMBL
Match: A0A022R2B2_ERYGU (Reticulon-like protein OS=Erythranthe guttata GN=MIMGU_mgv1a004061mg PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.0e-51
Identity = 151/423 (35.70%), Postives = 226/423 (53.43%), Query Frame = 1 

Query: 4   SRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDD----------NAECTLPGAV 63
           SRRR +        AGSVWE+R++ D+V+GG KVFN   D          N E  +    
Sbjct: 16  SRRRGSAPK-----AGSVWETRMKLDQVKGGFKVFNETPDLENNNTTTVNNPEIQMDNKK 75

Query: 64  AAAA---------GGSGRRKTWKSD--EGFNPILIAEEKPESSPSSGDEQSR-------- 123
              A         G SG+RKTWKSD  EG +P+ IA ++ +S+ +S DE S+        
Sbjct: 76  TENARAKQSPTSVGVSGKRKTWKSDNSEG-SPVQIARKRSDSTKNS-DESSKELTFSGDG 135

Query: 124 -----KSPIPARRLRSNGSPNKPVQISGEKTERNSTRKKTDHSRKSAVGFAKPATN---- 183
                K+P+  ++ RS+      +++   K+E +    K +    +AVG   PA      
Sbjct: 136 VVGIKKTPVLIKKTRSSAE----IELRKVKSEPSDGESKAE----TAVGDGMPADKNPIG 195

Query: 184 GIGK--------TPPEKSFKELNECRDKVISSS-------PSQDFFDAFEEE-----IEK 243
           GIG+            +S +E   C +K I+S        PS D+ D  E+E     +EK
Sbjct: 196 GIGEKKTLTLIGVKKSRSDEEFGVCEEKSITSDVGPAKIPPSDDYIDDDEDEDMEIEVEK 255

Query: 244 ESFDVKEINL---------PERKKIVAKTFPGN-------KQKLQTLMDLIMWRDLSRSA 303
           +S D+KEI +         P       KT P +         KLQ+ +DL+MWRD S+SA
Sbjct: 256 KSLDIKEIKVQVQNLKKHSPPPPVNHTKTIPNHFHGVSRTNSKLQSFVDLVMWRDASKSA 315

Query: 304 LVFGLGNLVIILSYFIKNINISFVSLISHMGLLYLAAIFVHRSIF--GRRKGFDSDDENF 351
            VFG+G   I+ S + K++NISF+S+IS++GL+YLAAIF+ RS+   G  +  ++ +++F
Sbjct: 316 FVFGVGTFAIVSSSYTKDLNISFISVISYLGLVYLAAIFLFRSLINRGSLEMNNAKNKDF 375

[Close]
BLAST of Cla013614 vs. TrEMBL
Match: A0A022R660_ERYGU (Reticulon-like protein OS=Erythranthe guttata GN=MIMGU_mgv1a004061mg PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.5e-50
Identity = 151/425 (35.53%), Postives = 225/425 (52.94%), Query Frame = 1 

Query: 4   SRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDD----------NAECTLPGAV 63
           SRRR +        AGSVWE+R++ D+V+GG KVFN   D          N E  +    
Sbjct: 16  SRRRGSAPK-----AGSVWETRMKLDQVKGGFKVFNETPDLENNNTTTVNNPEIQMDNKK 75

Query: 64  AAAA---------GGSGRRKTWKSD--EGFNPILIAEEKPESSPSSGDEQSR-------- 123
              A         G SG+RKTWKSD  EG +P+ IA ++ +S+ +S DE S+        
Sbjct: 76  TENARAKQSPTSVGVSGKRKTWKSDNSEG-SPVQIARKRSDSTKNS-DESSKELTFSGDG 135

Query: 124 -----KSPIPARRLRSNGSPNKPVQISGEKTERNSTRKKTDHSRKSAVGFAKPATN---- 183
                K+P+  ++ RS+      +++   K+E +    K +    +AVG   PA      
Sbjct: 136 VVGIKKTPVLIKKTRSSAE----IELRKVKSEPSDGESKAE----TAVGDGMPADKNPIG 195

Query: 184 GIGK--------TPPEKSFKELNECRDKVISSS-------PSQDFFDAFEEE-----IEK 243
           GIG+            +S +E   C +K I+S        PS D+ D  E+E     +EK
Sbjct: 196 GIGEKKTLTLIGVKKSRSDEEFGVCEEKSITSDVGPAKIPPSDDYIDDDEDEDMEIEVEK 255

Query: 244 ESFDVKEINL---------PERKKIVAKTFPG---------NKQKLQTLMDLIMWRDLSR 303
           +S D+KEI +         P       KT P             KLQ+ +DL+MWRD S+
Sbjct: 256 KSLDIKEIKVQVQNLKKHSPPPPVNHTKTIPTADHFHGVSRTNSKLQSFVDLVMWRDASK 315

Query: 304 SALVFGLGNLVIILSYFIKNINISFVSLISHMGLLYLAAIFVHRSIF--GRRKGFDSDDE 351
           SA VFG+G   I+ S + K++NISF+S+IS++GL+YLAAIF+ RS+   G  +  ++ ++
Sbjct: 316 SAFVFGVGTFAIVSSSYTKDLNISFISVISYLGLVYLAAIFLFRSLINRGSLEMNNAKNK 375

[Close]
BLAST of Cla013614 vs. TrEMBL
Match: A0A0A0LTX3_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_1G269900 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.6e-37
Identity = 92/200 (46.00%), Postives = 125/200 (62.50%), Query Frame = 1 

Query: 177 DAFEEEIEKESFDVKEINLPERKKIVAK--------------------------TFPGNK 236
           D  + EIEKESFD+KEINLPE KKIV +                           F    
Sbjct: 231 DGDDNEIEKESFDIKEINLPEPKKIVNEVKKFHQIYEKPVPHSSKPTYTSKEYHNFQEKS 290

Query: 237 QKLQTLMDLIMWRDLSRSALVFGLGNLVIILSYFIKNINISFVSLISHMGLLYLAAIFVH 296
            KLQ+L+DLIMW+++SRSA VFG+G+ VII S +  +INISF+S++S++GL YLAA F++
Sbjct: 291 NKLQSLVDLIMWKEVSRSAFVFGIGSFVIISSSYTNDINISFISVVSYVGLFYLAATFLY 350

Query: 297 RSIFGRRKGFDSDDENFAVEEEDMIRFAKRLVPFVNELLQYLKALFRGDPSATVKVGVLL 351
           RSI   R   D ++    V EE+ I   K L+P++NE L  ++ALF GDP+ T+K+ VLL
Sbjct: 351 RSII-YRGAIDMENVRNVVGEEEAIWVLKLLLPYLNEFLLKVRALFCGDPATTMKLAVLL 410

[Close]
BLAST of Cla013614 vs. NCBI nr
Match: gi|659070755|ref|XP_008456496.1| (PREDICTED: reticulon-like protein B21 [Cucumis melo])

HSP 1 Score: 619.0 bits (1595), Expect = 5.4e-174
Identity = 314/351 (89.46%), Postives = 327/351 (93.16%), Query Frame = 1 

Query: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDDNAECTLPG-AVAAAAGG 60
           MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDD+NAEC +P  A +AAAGG
Sbjct: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDENAECGVPTTAASAAAGG 60

Query: 61  SGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPIPARRLRSNGSPNKPVQISGEK 120
           SGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSP P+RRLRSNGSPNKPVQ+SGEK
Sbjct: 61  SGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNGSPNKPVQVSGEK 120

Query: 121 TERNSTRKKTDHSRKSAVGFAKPATNGIGKTPPEKSFKELNECRDKVISSSPSQDFFDAF 180
           TERNSTRKKTD SRKS VG  KP TNGIGKT  EKSFKELNEC++KVISSS SQDFFDAF
Sbjct: 121 TERNSTRKKTDQSRKSVVGLTKPPTNGIGKTSSEKSFKELNECKEKVISSSTSQDFFDAF 180

Query: 181 EEEIEKESFDVKEINLPERKKIVAKTFPGNKQKLQTLMDLIMWRDLSRSALVFGLGNLVI 240
           EEEIEKESFDVKEINLPERKKI+A+TFPGNKQKLQTLMDLIMWRD SRS LVFG+GNLVI
Sbjct: 181 EEEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVI 240

Query: 241 ILSYFIKNINISFVSLISHMGLLYLAAIFVHRSIFGRRKGFDSDDENFAVEEEDMIRFAK 300
           ILS FIKNINISF+SLISHMGLLYL AIFVH SIFGRRK  DSDDENF VEEEDMIRFAK
Sbjct: 241 ILSCFIKNINISFISLISHMGLLYLTAIFVHSSIFGRRKRIDSDDENFVVEEEDMIRFAK 300

Query: 301 RLVPFVNELLQYLKALFRGDPSATVKVGVLLFVLAKWGSFITLWNVLKIGY 351
           R VPFVNELLQ LKALFRGD SAT+KVGVLLFVLAKWGSFITLWNVLKIG+
Sbjct: 301 RSVPFVNELLQNLKALFRGDSSATMKVGVLLFVLAKWGSFITLWNVLKIGF 351

[Close]
BLAST of Cla013614 vs. NCBI nr
Match: gi|449442977|ref|XP_004139257.1| (PREDICTED: reticulon-like protein B18 [Cucumis sativus])

HSP 1 Score: 604.7 bits (1558), Expect = 1.0e-169
Identity = 306/350 (87.43%), Postives = 320/350 (91.43%), Query Frame = 1 

Query: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDDNAECTLPGAVAAAAGGS 60
           MDLSRRRAAVAA+GNVVAGSVWESRIRFDEVRGGIKVFNGDD+N EC +P    AA+ GS
Sbjct: 1   MDLSRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIP--TTAASAGS 60

Query: 61  GRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPIPARRLRSNGSPNKPVQISGEKT 120
           GRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSP P+RRLRSN SPNKPVQ+SGEK 
Sbjct: 61  GRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEKI 120

Query: 121 ERNSTRKKTDHSRKSAVGFAKPATNGIGKTPPEKSFKELNECRDKVISSSPSQDFFDAFE 180
           ERNSTRKKTD SRKSAVG  KP TNGIGKT  EKSFKE NECR+KVISSS SQDFFDAFE
Sbjct: 121 ERNSTRKKTDQSRKSAVGLTKPPTNGIGKTSSEKSFKESNECREKVISSSTSQDFFDAFE 180

Query: 181 EEIEKESFDVKEINLPERKKIVAKTFPGNKQKLQTLMDLIMWRDLSRSALVFGLGNLVII 240
           EEIEKESFDVKEINLPERKKI+A+TFPGNKQKLQTLMDLIMWRD SRS LVFG+GNLVII
Sbjct: 181 EEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVII 240

Query: 241 LSYFIKNINISFVSLISHMGLLYLAAIFVHRSIFGRRKGFDSDDENFAVEEEDMIRFAKR 300
           LS FIKNINIS +SLISHMGLLYL  IFVH SIFGRRK  DS+DEN  VEEEDMIRFAKR
Sbjct: 241 LSCFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDENLVVEEEDMIRFAKR 300

Query: 301 LVPFVNELLQYLKALFRGDPSATVKVGVLLFVLAKWGSFITLWNVLKIGY 351
           LVPFVNELLQ LKALFRGDPSAT+KVGVLLFVLAKWGSFITLWNVLKIG+
Sbjct: 301 LVPFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKIGF 348

[Close]
BLAST of Cla013614 vs. NCBI nr
Match: gi|703152328|ref|XP_010110376.1| (Reticulon-like protein [Morus notabilis])

HSP 1 Score: 218.0 bits (554), Expect = 2.8e-53
Identity = 155/439 (35.31%), Postives = 223/439 (50.80%), Query Frame = 1 

Query: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDDNAECTLPGAVAAAAGGS 60
           MD+ +RR  + +   VVAGSVWESR++ DEVRGGIKVFNG++   +             +
Sbjct: 1   MDVGKRRVGLRS-SVVVAGSVWESRMKHDEVRGGIKVFNGEESPEKQDQENVAKPKRPPA 60

Query: 61  GRRKTWKSD--EGF--NPILIAEEKPESSPSSGD---------EQSRKSPIPARRLRSNG 120
            +RKTWKS+  EGF  NPI IA  K E   +S +         E ++KSP+  RR RS G
Sbjct: 61  AKRKTWKSETLEGFEKNPIQIARGKSEEKKNSDEQVKEMSISVEGNKKSPVQPRRRRSEG 120

Query: 121 SPNKPVQISGEKTERNSTRKKTDHSRKSAVGFAKPATNGIGKTPPEK-----------SF 180
             NK + I   ++ R    K      K +V   K     I K+P EK           + 
Sbjct: 121 --NKEIGI--RRSPRTELAKPKSDVVKVSVEENKDVVEEIEKSPVEKKSEEIGSESDEAC 180

Query: 181 KELNECRDKVISSS---------------PSQDFFDAFEEEIEKESFDVKEINLP----- 240
           KE   C +KVISSS                 ++  +  E E+EK+S +VKEI  P     
Sbjct: 181 KEFGVCEEKVISSSVEDSKSEPKDDDERESEEEIGEEIEVEVEKKSIEVKEIEKPIEEKP 240

Query: 241 --------------ERKKIVA-KTFPGNKQKLQTL------------------------- 300
                         ER+++     F   ++K + +                         
Sbjct: 241 NKFVSDCEVKKVNFERRQVKKFHQFQNQQKKAEPISLNVEKQPPVLRRATLHSSFVKGSP 300

Query: 301 -----MDLIMWRDLSRSALVFGLGNLVIILSYFIKNINISFVSLISHMGLLYLAAIFVHR 351
                MDLIMW+D+SRS  +FG+G   I+ S + K++NISF+S++S++GL+YLAAIF+  
Sbjct: 301 TKSPPMDLIMWKDISRSVFIFGIGTFTILSSSYTKDLNISFISVMSYLGLVYLAAIFLFT 360

[Close]
BLAST of Cla013614 vs. NCBI nr
Match: gi|604328874|gb|EYU34356.1| (hypothetical protein MIMGU_mgv1a004061mg [Erythranthe guttata])

HSP 1 Score: 210.3 bits (534), Expect = 5.7e-51
Identity = 151/423 (35.70%), Postives = 226/423 (53.43%), Query Frame = 1 

Query: 4   SRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDD----------NAECTLPGAV 63
           SRRR +        AGSVWE+R++ D+V+GG KVFN   D          N E  +    
Sbjct: 16  SRRRGSAPK-----AGSVWETRMKLDQVKGGFKVFNETPDLENNNTTTVNNPEIQMDNKK 75

Query: 64  AAAA---------GGSGRRKTWKSD--EGFNPILIAEEKPESSPSSGDEQSR-------- 123
              A         G SG+RKTWKSD  EG +P+ IA ++ +S+ +S DE S+        
Sbjct: 76  TENARAKQSPTSVGVSGKRKTWKSDNSEG-SPVQIARKRSDSTKNS-DESSKELTFSGDG 135

Query: 124 -----KSPIPARRLRSNGSPNKPVQISGEKTERNSTRKKTDHSRKSAVGFAKPATN---- 183
                K+P+  ++ RS+      +++   K+E +    K +    +AVG   PA      
Sbjct: 136 VVGIKKTPVLIKKTRSSAE----IELRKVKSEPSDGESKAE----TAVGDGMPADKNPIG 195

Query: 184 GIGK--------TPPEKSFKELNECRDKVISSS-------PSQDFFDAFEEE-----IEK 243
           GIG+            +S +E   C +K I+S        PS D+ D  E+E     +EK
Sbjct: 196 GIGEKKTLTLIGVKKSRSDEEFGVCEEKSITSDVGPAKIPPSDDYIDDDEDEDMEIEVEK 255

Query: 244 ESFDVKEINL---------PERKKIVAKTFPGN-------KQKLQTLMDLIMWRDLSRSA 303
           +S D+KEI +         P       KT P +         KLQ+ +DL+MWRD S+SA
Sbjct: 256 KSLDIKEIKVQVQNLKKHSPPPPVNHTKTIPNHFHGVSRTNSKLQSFVDLVMWRDASKSA 315

Query: 304 LVFGLGNLVIILSYFIKNINISFVSLISHMGLLYLAAIFVHRSIF--GRRKGFDSDDENF 351
            VFG+G   I+ S + K++NISF+S+IS++GL+YLAAIF+ RS+   G  +  ++ +++F
Sbjct: 316 FVFGVGTFAIVSSSYTKDLNISFISVISYLGLVYLAAIFLFRSLINRGSLEMNNAKNKDF 375

[Close]
BLAST of Cla013614 vs. NCBI nr
Match: gi|848881535|ref|XP_012841125.1| (PREDICTED: reticulon-like protein B21 isoform X2 [Erythranthe guttata])

HSP 1 Score: 210.3 bits (534), Expect = 5.7e-51
Identity = 151/423 (35.70%), Postives = 226/423 (53.43%), Query Frame = 1 

Query: 4   SRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDD----------NAECTLPGAV 63
           SRRR +        AGSVWE+R++ D+V+GG KVFN   D          N E  +    
Sbjct: 16  SRRRGSAPK-----AGSVWETRMKLDQVKGGFKVFNETPDLENNNTTTVNNPEIQMDNKK 75

Query: 64  AAAA---------GGSGRRKTWKSD--EGFNPILIAEEKPESSPSSGDEQSR-------- 123
              A         G SG+RKTWKSD  EG +P+ IA ++ +S+ +S DE S+        
Sbjct: 76  TENARAKQSPTSVGVSGKRKTWKSDNSEG-SPVQIARKRSDSTKNS-DESSKELTFSGDG 135

Query: 124 -----KSPIPARRLRSNGSPNKPVQISGEKTERNSTRKKTDHSRKSAVGFAKPATN---- 183
                K+P+  ++ RS+      +++   K+E +    K +    +AVG   PA      
Sbjct: 136 VVGIKKTPVLIKKTRSSAE----IELRKVKSEPSDGESKAE----TAVGDGMPADKNPIG 195

Query: 184 GIGK--------TPPEKSFKELNECRDKVISSS-------PSQDFFDAFEEE-----IEK 243
           GIG+            +S +E   C +K I+S        PS D+ D  E+E     +EK
Sbjct: 196 GIGEKKTLTLIGVKKSRSDEEFGVCEEKSITSDVGPAKIPPSDDYIDDDEDEDMEIEVEK 255

Query: 244 ESFDVKEINL---------PERKKIVAKTFPGN-------KQKLQTLMDLIMWRDLSRSA 303
           +S D+KEI +         P       KT P +         KLQ+ +DL+MWRD S+SA
Sbjct: 256 KSLDIKEIKVQVQNLKKHSPPPPVNHTKTIPNHFHGVSRTNSKLQSFVDLVMWRDASKSA 315

Query: 304 LVFGLGNLVIILSYFIKNINISFVSLISHMGLLYLAAIFVHRSIF--GRRKGFDSDDENF 351
            VFG+G   I+ S + K++NISF+S+IS++GL+YLAAIF+ RS+   G  +  ++ +++F
Sbjct: 316 FVFGVGTFAIVSSSYTKDLNISFISVISYLGLVYLAAIFLFRSLINRGSLEMNNAKNKDF 375

The following BLAST results are available for this feature:
BLAST of Cla013614 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RTNLS_ARATH4.9e-3448.28Reticulon-like protein B21 OS=Arabidopsis thaliana GN=RTNLB21 PE=2 SV=2[more]
RTNLQ_ARATH3.4e-1935.77Reticulon-like protein B17 OS=Arabidopsis thaliana GN=RTNLB17 PE=2 SV=1[more]
RTNLR_ARATH1.7e-1824.65Reticulon-like protein B18 OS=Arabidopsis thaliana GN=RTNLB18 PE=2 SV=2[more]
BLAST of Cla013614 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LG57_CUCSA7.3e-17087.43Reticulon-like protein OS=Cucumis sativus GN=Csa_2G009500 PE=4 SV=1[more]
W9SFN6_9ROSA1.9e-5335.31Reticulon-like protein OS=Morus notabilis GN=L484_009984 PE=4 SV=1[more]
A0A022R2B2_ERYGU4.0e-5135.70Reticulon-like protein OS=Erythranthe guttata GN=MIMGU_mgv1a004061mg PE=4 SV=1[more]
A0A022R660_ERYGU1.5e-5035.53Reticulon-like protein OS=Erythranthe guttata GN=MIMGU_mgv1a004061mg PE=4 SV=1[more]
A0A0A0LTX3_CUCSA5.6e-3746.00Reticulon-like protein OS=Cucumis sativus GN=Csa_1G269900 PE=4 SV=1[more]
BLAST of Cla013614 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659070755|ref|XP_008456496.1|5.4e-17489.46PREDICTED: reticulon-like protein B21 [Cucumis melo][more]
gi|449442977|ref|XP_004139257.1|1.0e-16987.43PREDICTED: reticulon-like protein B18 [Cucumis sativus][more]
gi|703152328|ref|XP_010110376.1|2.8e-5335.31Reticulon-like protein [Morus notabilis][more]
gi|604328874|gb|EYU34356.1|5.7e-5135.70hypothetical protein MIMGU_mgv1a004061mg [Erythranthe guttata][more]
gi|848881535|ref|XP_012841125.1|5.7e-5135.70PREDICTED: reticulon-like protein B21 isoform X2 [Erythranthe guttata][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003388Reticulon
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0044425 membrane part
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU49707watermelon EST collection version 2.0transcribed_cluster
WMU72955watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla013614Cla013614.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU49707WMU49707transcribed_cluster
WMU72955WMU72955transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003388ReticulonPFAMPF02453Reticuloncoord: 217..350
score: 7.4
IPR003388ReticulonPROFILEPS50845RETICULONcoord: 216..350
score: 12
NoneNo IPR availablePANTHERPTHR10994RETICULONcoord: 214..350
score: 1.9
NoneNo IPR availablePANTHERPTHR10994:SF84RETICULON-LIKE PROTEIN B21coord: 214..350
score: 1.9