CmoCh05G012610 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G012610
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Reticulon-like protein
Location	Cmo_Chr05 : 9795654 .. 9799732 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTGACCCGGCTGAGGGCGGCAGCGGCGGCGAGGGGGAACGTGGTGGCGGGGTCTGTGTGGGAGAGTAGAATCAGATTGGATGAAGTCAGAGGTGGGGTTAAGGTGTTTAACGGCGACGACGGAAATGCCGAATGTGGGCTTCCGGTTGCTTCCGCCTCCCCCGTCAGCGGCGGCAGCGGAAGGAGGAAGACGTGGAAATCCGATGAGGGTTTTAACTCGATTCTCATCGCTGAGGAGAAACCAGAGTTGTCGAGCAGCGGCGATGAACAGAGTCGGAAAAGTCCGATTCCGGCGCGGAGATTGAGATCCAACGGCAGCCCAATCAAACCCGGCGAGAAAATAGAGAGAAACCCGACGAGGAAGAAGACCGAGCAATCTCGTAAATCTGCCGTCGGGTTAACCAAACCGTCGACGAACGGAACCGGAAAAACCCCGCCGGAGAAAAATGAATGCAGAGAGAAGGCGATTTCTTCTACTCCATTTCAAGATTTCTTCGATGCCTTCGATGAAGAAGAGATTGAGAAAGAAAGCTTCGACGTTAAGGAAATCAATTTACCAGAACGGAAGAAAATCGCAGCAGAAACTTTCCCGAGAAACAAACAGAATCTACAGAGATTAGGTGAGAAAATCCCAAATCCCAAATCCCGATTTTCATTTTCATTTTCATTTCCCCTAATTCAATTTCTTGAAATCTTCGGTGTTCTTCAGTGGATTTGATAATGTGGAGAGATATTTCAAGATCCGCTCTGGTTTTCGGAGTGGGAAATCTAGTTATAATCCTCTGTTATTTCATGAAGAACATGAATATCAGGTAAAAAAAAATTCCAAATCCGCCATTGTTGAGGGAAAGAAGAAACTGGGTGATTCAGTAAATTCTTCATTTAATGTTTTTGCAGCTTTATCAGCGTTATTTCGCACATGGGTCTTCTTTATCTGGCTGCCATTTTCGTCCATAGCTCCATTTTTGGAAGGTGCTCAAATGGGTTCTTCTTTTCTTCACTGATTTTCCATTTGATTTTCTGACTGATTTTCCCGGGAAAATTACAGGAGAAAAGGAATGGATTCAGATGATGAACATTACGCAATTGAAGAAGAAGAAGTGATTCGATTTGCTAAACGACTTGTTCCTTTCCTTAATCAATTGCTGCAAAATCTCAAGGCTCTGTTCATGGGAGATCCTTCTGCAACCATGAAGGTAATTTTCTTTTTTTTAATTTTTTTTTTAAAATTTCCAAATTCCATTACATATATAATTATTTTAAAAAAAATAGCATTTAAAAACTTATGGCCAGATTTAATATTTAATAATTTAGAAAAAAACAAAATGAACATCAAAACTTGAAGGCCATTTAATTAAAAAATTGATAGTGTCGGTTTGATTTTTTAAAATTTTTAATAATTAAATATGAGACATTTATAAATTACCAACCGTGAAATATTTTTAAATTTTTAAAAAATTTAAGAAAAAAATATAATTCAACCGAACATTTATGATTTAGATCGAGTAATATGGGTTGGTCGAGATTTTACATTTATTAAGGTAAATGATTTTGGTAAAAAGAATATTATATTAAATAATATTTGTTTGGTATTTTGCAGCTGGGTGTAACGCTGTTTGTGTTGGCAAGGTGGGGTAGCTTCATTACCCTTTGGAATGTCGTCAAATGTGGTAATTTTTTTTAAAATTAATTTAAATTATTTTCAATTTTAAAATTTGACTTAGTTTTTAAAATAATTTTAAAATGTGGTTTATTTATTTATTTATTATTGGATTCTCACAGGATTCATTGGGGTTTTCACACTGCCCAAGTTAATTACCCACGGTAAAATATATCTTCACCGACTTTTTACTTTTTACCGTTCTTTTTGTCGATAAGTCTTGTCGGTGTTGGAATTGGATACGGCCGAGTACAACCAAAACACCGTACACTCTGTGTTTTGGCGCGTCGATTTGTTTGACTCTGAAACTGGTCCCACTCTGACACTATCCTGACCCTCTATTGTCCCTTCACATCACAACTAAAACCCATAAGTTTTTTTTTTGTCGTCACGTGGGGTCCACAGCTTTCTTCACGAGACGTTTTCAGAGAAATTATTTTATTTTTATTTTTTAATTTTTGGGAAAATAATTAAATGAAATTATTTGTTTTTCTTTGTCGGTGAATTCGTTTCTTCGTTGGGTTTTCGTGTCGGCTGTGTCGGATGGCGTGATGTTTGATCGAATCATCTCAACCGTTCGTTTCAAGATCCCTTTTTTTTTTTGTCCCCTAAATTCTAAAATTAATCACCATTTTTTTTTAATAAATTTAATTTCGTGTCTATATATTATGTCTAGTAATTCTTCGAAATGTTTAGAATTTTTAGTAAATTTATGAAATTTAATTTTACTTTTAGTGAAATCAATTAAAGACAAATTTAAAAAATTAATGACTAAATTTGCTGTTTATCGGGAACGTTGTCGTTCGTGTTTCGATTTATTGTTAATAGCGTTGAATGGTATTGTTGAAAATATTTAGCTTTTCATTACGGTTTACCATATATATATATATCATATTTGACGATGGATGATAGGCTAATATCTTATAACGTTGAAGATATTTGACTTTTCATTATGGTTTACATATGCATCATATTTGACTCTTGATTATAGGCTACTATCGTGTATCCTCTTTCTATTTTCCTTGTGATTTATTTGATTTTGTAAATGATTATAGATAGAGAACTTTCACCACCATTAGGTGTCGGGATTTTAGCAGATATTTTCATGGTATCAGAGCAACAGTTTAGCAACCCCGACCCTTTCTTCCCCATGGCTTTCGAATCCTTTCTCATCTTCTTCCTTTCAACACTCTAATCCGTATGACTCGAGATATGAGCCGAACTTATGCGAGTCATATACGAATTCGAATCTCTAAGGGTTGACATGTCTCTACCTTAGGGATCCTATGTGGCTGCCTCACCACCATGTGACCTCTCTCACTCTTTGAGAGAGTTGTTTGTCCTTCTAACCTAGGGACTACCCTTTGCCTTTTATACTCTGTCTTTGATAGCCTTTCATATTGAGTTTGTGTACCTCTTCATTATTAAAGCCTAGTTTGTACAATCATGAAATAATACACTTTAGCCCACGAAAGGGGCTTTGCGACAATAACACCGTCGGTAATTACGAAAGATGTCACCAAACCCTAAAGAATAACATAAAACCTAACAACAGATCGAACTATAACAGCCCAAGTCCACCGCTAGCAACTACTGTCCTCTTTGGGGCGCGCTTTTCCTTTCGAGAGGGTCTAGCCCTACTATTACCAGTGCCTTGCACTGTTGGGTGACTGGCTTTGATACCATCTGTAACAACTCAAGCCTACTACTAGCAGCTTCCCCTCAAGTTATTTAAACGCGTAAAAGCTTTTGCGCTCTTGTAATGAATGTTTCGTTCCCTTCTCCAACTGATGTGGAATCTCACAATCCACCCGTTATTATGTTCTCTTTTGATTTTTGTTGATGTGTTTTAAGAGTTGTAATGATGTTATGGCGTTCTCTTTTGTAAATTTAGGTGAACAGTGGTTGACACTTTGTGGGAGTTCTTGGAAGTTATGCTCTCACAAGAAGGCAGTGGCTGTTGCCCTCTTCTTCGTAGTCTGGAGTTTTTCTTCGACTCTATATCGTGTTTGGGCAGGTAACCGTTTCGAACTGAAAACTCGATCATATGAATTTCAAAGCATGGTTTGAACATGGAACAGCATTGCGTAACATGTTTTATATGACATTGTATGTACGATGTTTGCAGTGTTCTTCGTGTTCGTGAGCTTTCGGTACTACCAAGAGGTTAAAAATGGAGAAGTAGCTCCAAAAAACGACACGGTTTCGGTAAGTTCGAAGCTCAAGAGACAATATTGAACAATTTTGAGGCTGTTTTTCTCTGTTTTTTTTTTAGCTAGTTAGCCAAAATTACCATGTAAATTCATGCACTATGGTAGAAATCAATCCATCGTGTTTTATCATTACATATTATTTTGAAAATGCCTAAACCTTCTCGACTTACTCGATATTAGGCATTTTGAACTATTTTGAAC

mRNA sequence

ATGGATTTGACCCGGCTGAGGGCGGCAGCGGCGGCGAGGGGGAACGTGGTGGCGGGGTCTGTGTGGGAGAGTAGAATCAGATTGGATGAAGTCAGAGGTGGGGTTAAGGTGTTTAACGGCGACGACGGAAATGCCGAATGTGGGCTTCCGGTTGCTTCCGCCTCCCCCGTCAGCGGCGGCAGCGGAAGGAGGAAGACGTGGAAATCCGATGAGGGTTTTAACTCGATTCTCATCGCTGAGGAGAAACCAGAGTTGTCGAGCAGCGGCGATGAACAGAGTCGGAAAAGTCCGATTCCGGCGCGGAGATTGAGATCCAACGGCAGCCCAATCAAACCCGGCGAGAAAATAGAGAGAAACCCGACGAGGAAGAAGACCGAGCAATCTCGTAAATCTGCCGTCGGGTTAACCAAACCGTCGACGAACGGAACCGGAAAAACCCCGCCGGAGAAAAATGAATGCAGAGAGAAGGCGATTTCTTCTACTCCATTTCAAGATTTCTTCGATGCCTTCGATGAAGAAGAGATTGAGAAAGAAAGCTTCGACGTTAAGGAAATCAATTTACCAGAACGGAAGAAAATCGCAGCAGAAACTTTCCCGAGAAACAAACAGAATCTACAGAGATTAGTGGATTTGATAATGTGGAGAGATATTTCAAGATCCGCTCTGGTTTTCGGAGTGGGAAATCTAGTTATAATCCTCTGTTATTTCATGAAGAACATGAATATCAGCTTTATCAGCGTTATTTCGCACATGGGTCTTCTTTATCTGGCTGCCATTTTCGTCCATAGCTCCATTTTTGGAAGGAGAAAAGGAATGGATTCAGATGATGAACATTACGCAATTGAAGAAGAAGAAGTGATTCGATTTGCTAAACGACTTGTTCCTTTCCTTAATCAATTGCTGCAAAATCTCAAGGCTCTGTTCATGGGAGATCCTTCTGCAACCATGAAGCTGGGTGTAACGCTGTTTGTGTTGGCAAGGTGGGGTAGCTTCATTACCCTTTGGAATGTCGTCAAATGTGGATTCATTGGGGTTTTCACACTGCCCAAGTTAATTACCCACGGTGAACAGTGGTTGACACTTTGTGGGAGTTCTTGGAAGTTATGCTCTCACAAGAAGGCAGTGGCTGTTGCCCTCTTCTTCGTAGTCTGGAGTTTTTCTTCGACTCTATATCGTGTTTGGGCAGTGTTCTTCGTGTTCGTGAGCTTTCGGTACTACCAAGAGGTTAAAAATGGAGAAGTAGCTCCAAAAAACGACACGGTTTCGGTAAGTTCGAAGCTCAAGAGACAATATTGAACAATTTTGAGGCTGTTTTTCTCTGTTTTTTTTTTAGCTAGTTAGCCAAAATTACCATGTAAATTCATGCACTATGGTAGAAATCAATCCATCGTGTTTTATCATTACATATTATTTTGAAAATGCCTAAACCTTCTCGACTTACTCGATATTAGGCATTTTGAACTATTTTGAAC

Coding sequence (CDS)

ATGGATTTGACCCGGCTGAGGGCGGCAGCGGCGGCGAGGGGGAACGTGGTGGCGGGGTCTGTGTGGGAGAGTAGAATCAGATTGGATGAAGTCAGAGGTGGGGTTAAGGTGTTTAACGGCGACGACGGAAATGCCGAATGTGGGCTTCCGGTTGCTTCCGCCTCCCCCGTCAGCGGCGGCAGCGGAAGGAGGAAGACGTGGAAATCCGATGAGGGTTTTAACTCGATTCTCATCGCTGAGGAGAAACCAGAGTTGTCGAGCAGCGGCGATGAACAGAGTCGGAAAAGTCCGATTCCGGCGCGGAGATTGAGATCCAACGGCAGCCCAATCAAACCCGGCGAGAAAATAGAGAGAAACCCGACGAGGAAGAAGACCGAGCAATCTCGTAAATCTGCCGTCGGGTTAACCAAACCGTCGACGAACGGAACCGGAAAAACCCCGCCGGAGAAAAATGAATGCAGAGAGAAGGCGATTTCTTCTACTCCATTTCAAGATTTCTTCGATGCCTTCGATGAAGAAGAGATTGAGAAAGAAAGCTTCGACGTTAAGGAAATCAATTTACCAGAACGGAAGAAAATCGCAGCAGAAACTTTCCCGAGAAACAAACAGAATCTACAGAGATTAGTGGATTTGATAATGTGGAGAGATATTTCAAGATCCGCTCTGGTTTTCGGAGTGGGAAATCTAGTTATAATCCTCTGTTATTTCATGAAGAACATGAATATCAGCTTTATCAGCGTTATTTCGCACATGGGTCTTCTTTATCTGGCTGCCATTTTCGTCCATAGCTCCATTTTTGGAAGGAGAAAAGGAATGGATTCAGATGATGAACATTACGCAATTGAAGAAGAAGAAGTGATTCGATTTGCTAAACGACTTGTTCCTTTCCTTAATCAATTGCTGCAAAATCTCAAGGCTCTGTTCATGGGAGATCCTTCTGCAACCATGAAGCTGGGTGTAACGCTGTTTGTGTTGGCAAGGTGGGGTAGCTTCATTACCCTTTGGAATGTCGTCAAATGTGGATTCATTGGGGTTTTCACACTGCCCAAGTTAATTACCCACGGTGAACAGTGGTTGACACTTTGTGGGAGTTCTTGGAAGTTATGCTCTCACAAGAAGGCAGTGGCTGTTGCCCTCTTCTTCGTAGTCTGGAGTTTTTCTTCGACTCTATATCGTGTTTGGGCAGTGTTCTTCGTGTTCGTGAGCTTTCGGTACTACCAAGAGGTTAAAAATGGAGAAGTAGCTCCAAAAAACGACACGGTTTCGGTAAGTTCGAAGCTCAAGAGACAATATTGA

Homology

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BLAST of CmoCh05G012610 vs. Swiss-Prot
Match: RTNLS_ARATH (Reticulon-like protein B21 OS=Arabidopsis thaliana GN=RTNLB21 PE=2 SV=2)

HSP 1 Score: 210.3 bits (534), Expect = 4.2e-53
Identity = 108/222 (48.65%), Postives = 149/222 (67.12%), Query Frame = 1


Query: 196 ETFPRNKQNLQRLVDLIMWRDISRSALVFGVGNLVIILCYFMKNMNISFISVISHMGLLY 255
           + F  ++  LQ LVDL+MWRD+SRS LVFG G  +II   +  ++N SFISV+++MGL+Y
Sbjct: 218 DNFTHSQSKLQSLVDLVMWRDVSRSTLVFGFGTFLIISSSYANDLNFSFISVVAYMGLIY 277

Query: 256 LAAIFVHSSIFGRRKGMDSDDEH--YAIEEEEVIRFAKRLVPFLNQLLQNLKALFMGDPS 315
           L  +FV  S+  R  GM  ++ H    + EE+V R  + ++P+LN+ L  L+ALF GDPS
Sbjct: 278 LGLMFVLKSLIHR--GMVEEERHKVVGVREEDVKRMLRLIMPYLNESLHQLRALFSGDPS 337

Query: 316 ATMKLGVTLFVLARWGSFITLWNVVKCGFIGVFTLPKLI--------THGEQWLTLCGSS 375
            T+K+GV LFVLAR GS ITLWN+ K GF+G FT+PK+          +G  W+     +
Sbjct: 338 TTLKMGVVLFVLARCGSSITLWNLAKFGFLGAFTIPKIFISYSTHFSAYGNFWMRRFRDA 397

Query: 376 WKLCSHKKAVAVALFFVVWSFSSTLYRVWAVFFVFVSFRYYQ 408
           W+ C+HKKAVA+ALF +VW+ SS   RVWA F + V+FRYYQ
Sbjct: 398 WESCNHKKAVALALFTLVWNLSSVTARVWAAFMLLVAFRYYQ 437

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BLAST of CmoCh05G012610 vs. Swiss-Prot
Match: RTNLQ_ARATH (Reticulon-like protein B17 OS=Arabidopsis thaliana GN=RTNLB17 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.8e-25
Identity = 97/357 (27.17%), Postives = 172/357 (48.18%), Query Frame = 1


Query: 87  SSGDEQSRKSPIPARRLRSNGSPIKPGEKIERNPTR--KKTEQSRKSAVGLTKPSTNGTG 146
           SS +  +  SP+P R +      + P   + ++ TR   + E + + A+ + +    G G
Sbjct: 34  SSPNTPNPSSPVPLRDIL-----LLPPSPLRKSRTRLSDRLEMTSEDAMAVVRKRGKGKG 93

Query: 147 KTPPEKNECREKAISSTPFQDFFDAFDEEEIEKESFDV---KEINLPERKK--------- 206
                     +K++ ++P          E +E++  ++   + + LP RK+         
Sbjct: 94  G---------QKSLLASPRNPRRSRRRSEAVEEKEANLVIEEIVKLPPRKRKTNGRPKKD 153

Query: 207 --------IAAETFPRNKQNLQRLV-----DLIMWRDISRSALVFGVGNLVIILCYFMKN 266
                    ++   P   Q+   L+     DL+MWRD+++S L FG G L  +   F K 
Sbjct: 154 KQSSAPPLCSSSDLPNTCQSDLNLIGEIISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKG 213

Query: 267 MNISFISVISHMGLLYLAAIFVHSSIFGRRKGMDSDDEHYAIEEEEVIRFAKRLVPFLNQ 326
           +N S  S +S++GL+ L   F+ +++  R+   +     + + E++V+R A+R++P  N 
Sbjct: 214 VNFSVFSAVSNLGLVLLCGSFLSNTLCQRKN--EDTKRAFHVSEDDVLRSARRVLPATNF 273

Query: 327 LLQNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCGFIGVFTLPKL---ITHG- 386
            +     LF G+PS T+K+   L + A +G  ITLW +   GF   FT+PKL    TH  
Sbjct: 274 FISKTSELFSGEPSMTLKVTPFLLLGAEYGHLITLWRLSAFGFFLSFTIPKLYSCYTHQI 333

Query: 387 ----EQWLTLCGSSWKLCSHKKAVAVALFFVVWSFSSTLYRVWAVFFVFVSFRYYQE 409
               E+  T  G +W +CSHKK +A +     W+ +S   R++AVF + V FRY ++
Sbjct: 334 SQKVERVKTRIGEAWGVCSHKKILAGSAVTAFWNLTSIRTRIFAVFIILVIFRYRRQ 374

[Close]

BLAST of CmoCh05G012610 vs. Swiss-Prot
Match: RTNLR_ARATH (Reticulon-like protein B18 OS=Arabidopsis thaliana GN=RTNLB18 PE=2 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 1.8e-24
Identity = 69/212 (32.55%), Postives = 114/212 (53.77%), Query Frame = 1


Query: 206 QRLVDLIMWRDISRSALVFGVGNLVII-LCYFMKNMNISFISVISHMGLLYLAAIFVHSS 265
           + + DLIMWRD+++S L FG G +  +  C+  K  N S  S IS++GLL+L   F+ ++
Sbjct: 193 ENISDLIMWRDVAKSTLWFGFGCICFLSTCFAAKGFNFSVFSAISYLGLLFLGVSFLSNT 252

Query: 266 IFGRRKGMDSDDEHYAIEEEEVIRFAKRLVPFLNQLLQNLKALFMGDPSATMKLGVTLFV 325
           +  R++  +       + E++V+R A+R++P  N  +     LF G+P+ T+K+   + +
Sbjct: 253 L--RQRVTEEARRELKLSEDDVLRIARRMLPITNLAISKTSELFSGEPAMTLKVAPFVLM 312

Query: 326 LARWGSFITLWNVVKCGFIGVFTLPKLITHGEQWLTL---CG-----SSWKLCSHKKAVA 385
            A +G  ITLW +   GF   FT+PKL +     L     C       +W +C+HKK VA
Sbjct: 313 GAEYGYLITLWRLCAFGFFLSFTIPKLYSCYASQLNQKVECAQRRFVEAWGVCTHKKFVA 372

Query: 386 VALFFVVWSFSSTLYRVWAVFFVFVSFRYYQE 409
            +     W+ +S   R  AVF + V  RY ++
Sbjct: 373 GSAVTAFWNLTSLKTRFIAVFIIVVVIRYRRQ 402

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BLAST of CmoCh05G012610 vs. TrEMBL
Match: A0A0A0LG57_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_2G009500 PE=4 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 5.1e-183
Identity = 347/448 (77.46%), Postives = 379/448 (84.60%), Query Frame = 1


Query: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPVASASPVSGG 60
           MDL+R RAA AA+GNVVAGSVWESRIR DEVRGG+KVFNGDD N ECG+P  +AS    G
Sbjct: 1   MDLSRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIPTTAAS---AG 60

Query: 61  SGRRKTWKSDEGFNSILIAEEKPELS-SSGDEQSRKSPIPARRLRSNGSPIKP----GEK 120
           SGRRKTWKSDEGFN ILIAEEKPE S SSGDEQSRKSP P+RRLRSN SP KP    GEK
Sbjct: 61  SGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEK 120

Query: 121 IERNPTRKKTEQSRKSAVGLTKPSTNGTGKTPPEK-----NECREKAISSTPFQDFFDAF 180
           IERN TRKKT+QSRKSAVGLTKP TNG GKT  EK     NECREK ISS+  QDFFDAF
Sbjct: 121 IERNSTRKKTDQSRKSAVGLTKPPTNGIGKTSSEKSFKESNECREKVISSSTSQDFFDAF 180

Query: 181 DEEEIEKESFDVKEINLPERKKIAAETFPRNKQNLQRLVDLIMWRDISRSALVFGVGNLV 240
            EEEIEKESFDVKEINLPERKKI A+TFP NKQ LQ L+DLIMWRD SRS LVFGVGNLV
Sbjct: 181 -EEEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLV 240

Query: 241 IILCYFMKNMNISFISVISHMGLLYLAAIFVHSSIFGRRKGMDSDDEHYAIEEEEVIRFA 300
           IIL  F+KN+NIS IS+ISHMGLLYL  IFVHSSIFGRRK +DS+DE+  +EEE++IRFA
Sbjct: 241 IILSCFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDENLVVEEEDMIRFA 300

Query: 301 KRLVPFLNQLLQNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCGFIGVFTLPK 360
           KRLVPF+N+LLQNLKALF GDPSATMK+GV LFVLA+WGSFITLWNV+K GFIGVFTLPK
Sbjct: 301 KRLVPFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKIGFIGVFTLPK 360

Query: 361 LITHGEQWLTLCGSSWKLCSHKKAVAVALFFVVWSFSSTLYRVWAVFFVFVSFRYYQE-- 420
           LITHGE WL LCGSSWKLCSHK+ V +A+FF+VW+FSSTLYRVWA F V VSFRYYQE  
Sbjct: 361 LITHGEHWLKLCGSSWKLCSHKRGVFIAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESP 420

Query: 421 -----VKNGEVAPKNDTVSVSSKLKRQY 432
                VKNGEVA +N T+S SSKLK+QY
Sbjct: 421 ERDVWVKNGEVASRNKTMSTSSKLKKQY 444

[Close]

BLAST of CmoCh05G012610 vs. TrEMBL
Match: A0A022R2B2_ERYGU (Reticulon-like protein OS=Erythranthe guttata GN=MIMGU_mgv1a004061mg PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 7.4e-65
Identity = 179/473 (37.84%), Postives = 251/473 (53.07%), Query Frame = 1


Query: 18  AGSVWESRIRLDEVRGGVKVFNGDDG-----------------NAECGLPVASASPVSGG 77
           AGSVWE+R++LD+V+GG KVFN                     N +     A  SP S G
Sbjct: 25  AGSVWETRMKLDQVKGGFKVFNETPDLENNNTTTVNNPEIQMDNKKTENARAKQSPTSVG 84

Query: 78  -SGRRKTWKSDEGFNS-ILIAEEKPELSSSGDEQSR-------------KSPIPARRLRS 137
            SG+RKTWKSD    S + IA ++ + + + DE S+             K+P+  ++ RS
Sbjct: 85  VSGKRKTWKSDNSEGSPVQIARKRSDSTKNSDESSKELTFSGDGVVGIKKTPVLIKKTRS 144

Query: 138 NGSPIKPGEKIERNPTRKKTEQSRKSAVGLTKPSTNGTG-------------KTPPEKNE 197
           +        K E +    K E +    +   K    G G             ++  E   
Sbjct: 145 SAEIELRKVKSEPSDGESKAETAVGDGMPADKNPIGGIGEKKTLTLIGVKKSRSDEEFGV 204

Query: 198 CREKAISST-------PFQDFFDAFDEE----EIEKESFDVKEINL---------PERKK 257
           C EK+I+S        P  D+ D  ++E    E+EK+S D+KEI +         P    
Sbjct: 205 CEEKSITSDVGPAKIPPSDDYIDDDEDEDMEIEVEKKSLDIKEIKVQVQNLKKHSPPPPV 264

Query: 258 IAAETFP-------RNKQNLQRLVDLIMWRDISRSALVFGVGNLVIILCYFMKNMNISFI 317
              +T P       R    LQ  VDL+MWRD S+SA VFGVG   I+   + K++NISFI
Sbjct: 265 NHTKTIPNHFHGVSRTNSKLQSFVDLVMWRDASKSAFVFGVGTFAIVSSSYTKDLNISFI 324

Query: 318 SVISHMGLLYLAAIFVHSSIFGRR--KGMDSDDEHYAIEEEEVIRFAKRLVPFLNQLLQN 377
           SVIS++GL+YLAAIF+  S+  R   +  ++ ++ + + EEE I   K  +P+LN+ L  
Sbjct: 325 SVISYLGLVYLAAIFLFRSLINRGSLEMNNAKNKDFVVGEEEAIWAVKLFLPYLNEFLLK 384

Query: 378 LKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCGFIGVFTLPK--------LITHG 409
           L+ALF GDPS TMKL V LF+LAR GS IT+W + K GFIGVFT+PK        L  +G
Sbjct: 385 LRALFSGDPSTTMKLAVLLFILARCGSSITVWKMAKLGFIGVFTVPKICSTYSSQLTAYG 444

[Close]

BLAST of CmoCh05G012610 vs. TrEMBL
Match: A0A022R660_ERYGU (Reticulon-like protein OS=Erythranthe guttata GN=MIMGU_mgv1a004061mg PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.3e-64
Identity = 179/475 (37.68%), Postives = 251/475 (52.84%), Query Frame = 1


Query: 18  AGSVWESRIRLDEVRGGVKVFNGDDG-----------------NAECGLPVASASPVSGG 77
           AGSVWE+R++LD+V+GG KVFN                     N +     A  SP S G
Sbjct: 25  AGSVWETRMKLDQVKGGFKVFNETPDLENNNTTTVNNPEIQMDNKKTENARAKQSPTSVG 84

Query: 78  -SGRRKTWKSDEGFNS-ILIAEEKPELSSSGDEQSR-------------KSPIPARRLRS 137
            SG+RKTWKSD    S + IA ++ + + + DE S+             K+P+  ++ RS
Sbjct: 85  VSGKRKTWKSDNSEGSPVQIARKRSDSTKNSDESSKELTFSGDGVVGIKKTPVLIKKTRS 144

Query: 138 NGSPIKPGEKIERNPTRKKTEQSRKSAVGLTKPSTNGTG-------------KTPPEKNE 197
           +        K E +    K E +    +   K    G G             ++  E   
Sbjct: 145 SAEIELRKVKSEPSDGESKAETAVGDGMPADKNPIGGIGEKKTLTLIGVKKSRSDEEFGV 204

Query: 198 CREKAISST-------PFQDFFDAFDEE----EIEKESFDVKEINL---------PERKK 257
           C EK+I+S        P  D+ D  ++E    E+EK+S D+KEI +         P    
Sbjct: 205 CEEKSITSDVGPAKIPPSDDYIDDDEDEDMEIEVEKKSLDIKEIKVQVQNLKKHSPPPPV 264

Query: 258 IAAETFP---------RNKQNLQRLVDLIMWRDISRSALVFGVGNLVIILCYFMKNMNIS 317
              +T P         R    LQ  VDL+MWRD S+SA VFGVG   I+   + K++NIS
Sbjct: 265 NHTKTIPTADHFHGVSRTNSKLQSFVDLVMWRDASKSAFVFGVGTFAIVSSSYTKDLNIS 324

Query: 318 FISVISHMGLLYLAAIFVHSSIFGRR--KGMDSDDEHYAIEEEEVIRFAKRLVPFLNQLL 377
           FISVIS++GL+YLAAIF+  S+  R   +  ++ ++ + + EEE I   K  +P+LN+ L
Sbjct: 325 FISVISYLGLVYLAAIFLFRSLINRGSLEMNNAKNKDFVVGEEEAIWAVKLFLPYLNEFL 384

Query: 378 QNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCGFIGVFTLPK--------LIT 409
             L+ALF GDPS TMKL V LF+LAR GS IT+W + K GFIGVFT+PK        L  
Sbjct: 385 LKLRALFSGDPSTTMKLAVLLFILARCGSSITVWKMAKLGFIGVFTVPKICSTYSSQLTA 444

[Close]

BLAST of CmoCh05G012610 vs. TrEMBL
Match: A0A0A0LTX3_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_1G269900 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.7e-56
Identity = 129/272 (47.43%), Postives = 168/272 (61.76%), Query Frame = 1


Query: 171 DEEEIEKESFDVKEINLPERKKIAAET--------------------------FPRNKQN 230
           D+ EIEKESFD+KEINLPE KKI  E                           F      
Sbjct: 233 DDNEIEKESFDIKEINLPEPKKIVNEVKKFHQIYEKPVPHSSKPTYTSKEYHNFQEKSNK 292

Query: 231 LQRLVDLIMWRDISRSALVFGVGNLVIILCYFMKNMNISFISVISHMGLLYLAAIFVHSS 290
           LQ LVDLIMW+++SRSA VFG+G+ VII   +  ++NISFISV+S++GL YLAA F++ S
Sbjct: 293 LQSLVDLIMWKEVSRSAFVFGIGSFVIISSSYTNDINISFISVVSYVGLFYLAATFLYRS 352

Query: 291 IFGRRKGMDSDDEHYAIEEEEVIRFAKRLVPFLNQLLQNLKALFMGDPSATMKLGVTLFV 350
           I   R  +D ++    + EEE I   K L+P+LN+ L  ++ALF GDP+ TMKL V LF 
Sbjct: 353 II-YRGAIDMENVRNVVGEEEAIWVLKLLLPYLNEFLLKVRALFCGDPATTMKLAVLLFA 412

Query: 351 LARWGSFITLWNVVKCGFIGVFTLPK--------LITHGEQWLTLCGSSWKLCSHKKAVA 409
            AR GS IT+W V K GF GVFTLPK        L  + + W+     +W+ CSHKK VA
Sbjct: 413 SARCGSSITVWKVAKWGFFGVFTLPKICSSYSSHLAAYAKFWIRRFRDAWESCSHKKGVA 472

[Close]

BLAST of CmoCh05G012610 vs. TrEMBL
Match: A0A0D2W896_GOSRA (Reticulon-like protein OS=Gossypium raimondii GN=B456_013G216600 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.3e-53
Identity = 113/230 (49.13%), Postives = 158/230 (68.70%), Query Frame = 1


Query: 198 FPRNKQNLQRLVDLIMWRDISRSALVFGVGNLVIILCYFMKNMNISFISVISHMGLLYLA 257
           FP+ +  LQ +VDL+MWRDI +SAL+FG+G+ +II   + +++NISFISVIS+MGL+YLA
Sbjct: 343 FPQTQNKLQNIVDLVMWRDIPKSALMFGIGSFIIISSSYTQDLNISFISVISYMGLVYLA 402

Query: 258 AIFVHSSIFGRRKGMDSDDEHYAIEEEEVIRFAKRLVPFLNQLLQNLKALFMGDPSATMK 317
           AIF++ SI  R   ++ D+ +  + EEE I   K ++P+LN+ L  L+ALF GDPS TMK
Sbjct: 403 AIFLYRSILCRGV-VEIDESNCVVGEEEAIWLLKLVLPYLNEFLLKLRALFSGDPSTTMK 462

Query: 318 LGVTLFVLARWGSFITLWNVVKCGFIGVFTLPKLIT--------HGEQWLTLCGSSWKLC 377
           + V LFVLAR GS IT+W + K GF GVF +PKL T        +G+ W+     +W+ C
Sbjct: 463 MAVLLFVLARCGSSITIWKMAKLGFFGVFIVPKLCTSYSHQLTAYGKFWIGRFRDAWESC 522

Query: 378 SHKKAVAVALFFVVWSFSSTLYRVWAVFFVFVSFRYYQEVKNGEVAPKND 420
           +HKKAVA+ LF +VW+  STL R+WA F +FV+ RYYQ+    E   K +
Sbjct: 523 THKKAVAMVLFTLVWNLCSTLARIWAAFMLFVALRYYQQKMTDEWMEKEE 571

[Close]

BLAST of CmoCh05G012610 vs. TAIR10
Match: AT5G58000.1 (AT5G58000.1 Reticulon family protein)

HSP 1 Score: 210.3 bits (534), Expect = 2.4e-54
Identity = 108/222 (48.65%), Postives = 149/222 (67.12%), Query Frame = 1


Query: 196 ETFPRNKQNLQRLVDLIMWRDISRSALVFGVGNLVIILCYFMKNMNISFISVISHMGLLY 255
           + F  ++  LQ LVDL+MWRD+SRS LVFG G  +II   +  ++N SFISV+++MGL+Y
Sbjct: 218 DNFTHSQSKLQSLVDLVMWRDVSRSTLVFGFGTFLIISSSYANDLNFSFISVVAYMGLIY 277

Query: 256 LAAIFVHSSIFGRRKGMDSDDEH--YAIEEEEVIRFAKRLVPFLNQLLQNLKALFMGDPS 315
           L  +FV  S+  R  GM  ++ H    + EE+V R  + ++P+LN+ L  L+ALF GDPS
Sbjct: 278 LGLMFVLKSLIHR--GMVEEERHKVVGVREEDVKRMLRLIMPYLNESLHQLRALFSGDPS 337

Query: 316 ATMKLGVTLFVLARWGSFITLWNVVKCGFIGVFTLPKLI--------THGEQWLTLCGSS 375
            T+K+GV LFVLAR GS ITLWN+ K GF+G FT+PK+          +G  W+     +
Sbjct: 338 TTLKMGVVLFVLARCGSSITLWNLAKFGFLGAFTIPKIFISYSTHFSAYGNFWMRRFRDA 397

Query: 376 WKLCSHKKAVAVALFFVVWSFSSTLYRVWAVFFVFVSFRYYQ 408
           W+ C+HKKAVA+ALF +VW+ SS   RVWA F + V+FRYYQ
Sbjct: 398 WESCNHKKAVALALFTLVWNLSSVTARVWAAFMLLVAFRYYQ 437

[Close]

BLAST of CmoCh05G012610 vs. TAIR10
Match: AT2G20590.1 (AT2G20590.1 Reticulon family protein)

HSP 1 Score: 117.1 bits (292), Expect = 2.7e-26
Identity = 97/357 (27.17%), Postives = 172/357 (48.18%), Query Frame = 1


Query: 87  SSGDEQSRKSPIPARRLRSNGSPIKPGEKIERNPTR--KKTEQSRKSAVGLTKPSTNGTG 146
           SS +  +  SP+P R +      + P   + ++ TR   + E + + A+ + +    G G
Sbjct: 34  SSPNTPNPSSPVPLRDIL-----LLPPSPLRKSRTRLSDRLEMTSEDAMAVVRKRGKGKG 93

Query: 147 KTPPEKNECREKAISSTPFQDFFDAFDEEEIEKESFDV---KEINLPERKK--------- 206
                     +K++ ++P          E +E++  ++   + + LP RK+         
Sbjct: 94  G---------QKSLLASPRNPRRSRRRSEAVEEKEANLVIEEIVKLPPRKRKTNGRPKKD 153

Query: 207 --------IAAETFPRNKQNLQRLV-----DLIMWRDISRSALVFGVGNLVIILCYFMKN 266
                    ++   P   Q+   L+     DL+MWRD+++S L FG G L  +   F K 
Sbjct: 154 KQSSAPPLCSSSDLPNTCQSDLNLIGEIISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKG 213

Query: 267 MNISFISVISHMGLLYLAAIFVHSSIFGRRKGMDSDDEHYAIEEEEVIRFAKRLVPFLNQ 326
           +N S  S +S++GL+ L   F+ +++  R+   +     + + E++V+R A+R++P  N 
Sbjct: 214 VNFSVFSAVSNLGLVLLCGSFLSNTLCQRKN--EDTKRAFHVSEDDVLRSARRVLPATNF 273

Query: 327 LLQNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCGFIGVFTLPKL---ITHG- 386
            +     LF G+PS T+K+   L + A +G  ITLW +   GF   FT+PKL    TH  
Sbjct: 274 FISKTSELFSGEPSMTLKVTPFLLLGAEYGHLITLWRLSAFGFFLSFTIPKLYSCYTHQI 333

Query: 387 ----EQWLTLCGSSWKLCSHKKAVAVALFFVVWSFSSTLYRVWAVFFVFVSFRYYQE 409
               E+  T  G +W +CSHKK +A +     W+ +S   R++AVF + V FRY ++
Sbjct: 334 SQKVERVKTRIGEAWGVCSHKKILAGSAVTAFWNLTSIRTRIFAVFIILVIFRYRRQ 374

[Close]

BLAST of CmoCh05G012610 vs. TAIR10
Match: AT4G28430.1 (AT4G28430.1 Reticulon family protein)

HSP 1 Score: 115.2 bits (287), Expect = 1.0e-25
Identity = 69/212 (32.55%), Postives = 114/212 (53.77%), Query Frame = 1


Query: 206 QRLVDLIMWRDISRSALVFGVGNLVII-LCYFMKNMNISFISVISHMGLLYLAAIFVHSS 265
           + + DLIMWRD+++S L FG G +  +  C+  K  N S  S IS++GLL+L   F+ ++
Sbjct: 193 ENISDLIMWRDVAKSTLWFGFGCICFLSTCFAAKGFNFSVFSAISYLGLLFLGVSFLSNT 252

Query: 266 IFGRRKGMDSDDEHYAIEEEEVIRFAKRLVPFLNQLLQNLKALFMGDPSATMKLGVTLFV 325
           +  R++  +       + E++V+R A+R++P  N  +     LF G+P+ T+K+   + +
Sbjct: 253 L--RQRVTEEARRELKLSEDDVLRIARRMLPITNLAISKTSELFSGEPAMTLKVAPFVLM 312

Query: 326 LARWGSFITLWNVVKCGFIGVFTLPKLITHGEQWLTL---CG-----SSWKLCSHKKAVA 385
            A +G  ITLW +   GF   FT+PKL +     L     C       +W +C+HKK VA
Sbjct: 313 GAEYGYLITLWRLCAFGFFLSFTIPKLYSCYASQLNQKVECAQRRFVEAWGVCTHKKFVA 372

Query: 386 VALFFVVWSFSSTLYRVWAVFFVFVSFRYYQE 409
            +     W+ +S   R  AVF + V  RY ++
Sbjct: 373 GSAVTAFWNLTSLKTRFIAVFIIVVVIRYRRQ 402

[Close]

BLAST of CmoCh05G012610 vs. NCBI nr
Match: gi|659070755|ref|XP_008456496.1| (PREDICTED: reticulon-like protein B21 [Cucumis melo])

HSP 1 Score: 662.1 bits (1707), Expect = 6.4e-187
Identity = 352/448 (78.57%), Postives = 383/448 (85.49%), Query Frame = 1


Query: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPVASASPVSGG 60
           MDL+R RAA AARGNVVAGSVWESRIR DEVRGG+KVFNGDD NAECG+P  +AS  +GG
Sbjct: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDENAECGVPTTAASAAAGG 60

Query: 61  SGRRKTWKSDEGFNSILIAEEKPELS-SSGDEQSRKSPIPARRLRSNGSPIKP----GEK 120
           SGRRKTWKSDEGFN ILIAEEKPE S SSGDEQSRKSP P+RRLRSNGSP KP    GEK
Sbjct: 61  SGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNGSPNKPVQVSGEK 120

Query: 121 IERNPTRKKTEQSRKSAVGLTKPSTNGTGKTPPEK-----NECREKAISSTPFQDFFDAF 180
            ERN TRKKT+QSRKS VGLTKP TNG GKT  EK     NEC+EK ISS+  QDFFDAF
Sbjct: 121 TERNSTRKKTDQSRKSVVGLTKPPTNGIGKTSSEKSFKELNECKEKVISSSTSQDFFDAF 180

Query: 181 DEEEIEKESFDVKEINLPERKKIAAETFPRNKQNLQRLVDLIMWRDISRSALVFGVGNLV 240
            EEEIEKESFDVKEINLPERKKI A+TFP NKQ LQ L+DLIMWRD SRS LVFGVGNLV
Sbjct: 181 -EEEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLV 240

Query: 241 IILCYFMKNMNISFISVISHMGLLYLAAIFVHSSIFGRRKGMDSDDEHYAIEEEEVIRFA 300
           IIL  F+KN+NISFIS+ISHMGLLYL AIFVHSSIFGRRK +DSDDE++ +EEE++IRFA
Sbjct: 241 IILSCFIKNINISFISLISHMGLLYLTAIFVHSSIFGRRKRIDSDDENFVVEEEDMIRFA 300

Query: 301 KRLVPFLNQLLQNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCGFIGVFTLPK 360
           KR VPF+N+LLQNLKALF GD SATMK+GV LFVLA+WGSFITLWNV+K GFIGVFTLPK
Sbjct: 301 KRSVPFVNELLQNLKALFRGDSSATMKVGVLLFVLAKWGSFITLWNVLKIGFIGVFTLPK 360

Query: 361 LITHGEQWLTLCGSSWKLCSHKKAVAVALFFVVWSFSSTLYRVWAVFFVFVSFRYYQE-- 420
           LITHGE WL LCGSSWKLCSHK+ V VA+FF+VW+FSSTLYRVWA F V VSFRYYQE  
Sbjct: 361 LITHGEHWLKLCGSSWKLCSHKRGVFVAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESP 420

Query: 421 -----VKNGEVAPKNDTVSVSSKLKRQY 432
                VKNGEVA +N+TVS SSKLKRQY
Sbjct: 421 ERDVWVKNGEVASRNNTVSTSSKLKRQY 447

[Close]

BLAST of CmoCh05G012610 vs. NCBI nr
Match: gi|449442977|ref|XP_004139257.1| (PREDICTED: reticulon-like protein B18 [Cucumis sativus])

HSP 1 Score: 648.7 bits (1672), Expect = 7.3e-183
Identity = 347/448 (77.46%), Postives = 379/448 (84.60%), Query Frame = 1


Query: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPVASASPVSGG 60
           MDL+R RAA AA+GNVVAGSVWESRIR DEVRGG+KVFNGDD N ECG+P  +AS    G
Sbjct: 1   MDLSRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIPTTAAS---AG 60

Query: 61  SGRRKTWKSDEGFNSILIAEEKPELS-SSGDEQSRKSPIPARRLRSNGSPIKP----GEK 120
           SGRRKTWKSDEGFN ILIAEEKPE S SSGDEQSRKSP P+RRLRSN SP KP    GEK
Sbjct: 61  SGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEK 120

Query: 121 IERNPTRKKTEQSRKSAVGLTKPSTNGTGKTPPEK-----NECREKAISSTPFQDFFDAF 180
           IERN TRKKT+QSRKSAVGLTKP TNG GKT  EK     NECREK ISS+  QDFFDAF
Sbjct: 121 IERNSTRKKTDQSRKSAVGLTKPPTNGIGKTSSEKSFKESNECREKVISSSTSQDFFDAF 180

Query: 181 DEEEIEKESFDVKEINLPERKKIAAETFPRNKQNLQRLVDLIMWRDISRSALVFGVGNLV 240
            EEEIEKESFDVKEINLPERKKI A+TFP NKQ LQ L+DLIMWRD SRS LVFGVGNLV
Sbjct: 181 -EEEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLV 240

Query: 241 IILCYFMKNMNISFISVISHMGLLYLAAIFVHSSIFGRRKGMDSDDEHYAIEEEEVIRFA 300
           IIL  F+KN+NIS IS+ISHMGLLYL  IFVHSSIFGRRK +DS+DE+  +EEE++IRFA
Sbjct: 241 IILSCFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDENLVVEEEDMIRFA 300

Query: 301 KRLVPFLNQLLQNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCGFIGVFTLPK 360
           KRLVPF+N+LLQNLKALF GDPSATMK+GV LFVLA+WGSFITLWNV+K GFIGVFTLPK
Sbjct: 301 KRLVPFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKIGFIGVFTLPK 360

Query: 361 LITHGEQWLTLCGSSWKLCSHKKAVAVALFFVVWSFSSTLYRVWAVFFVFVSFRYYQE-- 420
           LITHGE WL LCGSSWKLCSHK+ V +A+FF+VW+FSSTLYRVWA F V VSFRYYQE  
Sbjct: 361 LITHGEHWLKLCGSSWKLCSHKRGVFIAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESP 420

Query: 421 -----VKNGEVAPKNDTVSVSSKLKRQY 432
                VKNGEVA +N T+S SSKLK+QY
Sbjct: 421 ERDVWVKNGEVASRNKTMSTSSKLKKQY 444

[Close]

BLAST of CmoCh05G012610 vs. NCBI nr
Match: gi|604328874|gb|EYU34356.1| (hypothetical protein MIMGU_mgv1a004061mg [Erythranthe guttata])

HSP 1 Score: 256.1 bits (653), Expect = 1.1e-64
Identity = 179/473 (37.84%), Postives = 251/473 (53.07%), Query Frame = 1


Query: 18  AGSVWESRIRLDEVRGGVKVFNGDDG-----------------NAECGLPVASASPVSGG 77
           AGSVWE+R++LD+V+GG KVFN                     N +     A  SP S G
Sbjct: 25  AGSVWETRMKLDQVKGGFKVFNETPDLENNNTTTVNNPEIQMDNKKTENARAKQSPTSVG 84

Query: 78  -SGRRKTWKSDEGFNS-ILIAEEKPELSSSGDEQSR-------------KSPIPARRLRS 137
            SG+RKTWKSD    S + IA ++ + + + DE S+             K+P+  ++ RS
Sbjct: 85  VSGKRKTWKSDNSEGSPVQIARKRSDSTKNSDESSKELTFSGDGVVGIKKTPVLIKKTRS 144

Query: 138 NGSPIKPGEKIERNPTRKKTEQSRKSAVGLTKPSTNGTG-------------KTPPEKNE 197
           +        K E +    K E +    +   K    G G             ++  E   
Sbjct: 145 SAEIELRKVKSEPSDGESKAETAVGDGMPADKNPIGGIGEKKTLTLIGVKKSRSDEEFGV 204

Query: 198 CREKAISST-------PFQDFFDAFDEE----EIEKESFDVKEINL---------PERKK 257
           C EK+I+S        P  D+ D  ++E    E+EK+S D+KEI +         P    
Sbjct: 205 CEEKSITSDVGPAKIPPSDDYIDDDEDEDMEIEVEKKSLDIKEIKVQVQNLKKHSPPPPV 264

Query: 258 IAAETFP-------RNKQNLQRLVDLIMWRDISRSALVFGVGNLVIILCYFMKNMNISFI 317
              +T P       R    LQ  VDL+MWRD S+SA VFGVG   I+   + K++NISFI
Sbjct: 265 NHTKTIPNHFHGVSRTNSKLQSFVDLVMWRDASKSAFVFGVGTFAIVSSSYTKDLNISFI 324

Query: 318 SVISHMGLLYLAAIFVHSSIFGRR--KGMDSDDEHYAIEEEEVIRFAKRLVPFLNQLLQN 377
           SVIS++GL+YLAAIF+  S+  R   +  ++ ++ + + EEE I   K  +P+LN+ L  
Sbjct: 325 SVISYLGLVYLAAIFLFRSLINRGSLEMNNAKNKDFVVGEEEAIWAVKLFLPYLNEFLLK 384

Query: 378 LKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCGFIGVFTLPK--------LITHG 409
           L+ALF GDPS TMKL V LF+LAR GS IT+W + K GFIGVFT+PK        L  +G
Sbjct: 385 LRALFSGDPSTTMKLAVLLFILARCGSSITVWKMAKLGFIGVFTVPKICSTYSSQLTAYG 444

[Close]

BLAST of CmoCh05G012610 vs. NCBI nr
Match: gi|848881535|ref|XP_012841125.1| (PREDICTED: reticulon-like protein B21 isoform X2 [Erythranthe guttata])

HSP 1 Score: 256.1 bits (653), Expect = 1.1e-64
Identity = 179/473 (37.84%), Postives = 251/473 (53.07%), Query Frame = 1


Query: 18  AGSVWESRIRLDEVRGGVKVFNGDDG-----------------NAECGLPVASASPVSGG 77
           AGSVWE+R++LD+V+GG KVFN                     N +     A  SP S G
Sbjct: 25  AGSVWETRMKLDQVKGGFKVFNETPDLENNNTTTVNNPEIQMDNKKTENARAKQSPTSVG 84

Query: 78  -SGRRKTWKSDEGFNS-ILIAEEKPELSSSGDEQSR-------------KSPIPARRLRS 137
            SG+RKTWKSD    S + IA ++ + + + DE S+             K+P+  ++ RS
Sbjct: 85  VSGKRKTWKSDNSEGSPVQIARKRSDSTKNSDESSKELTFSGDGVVGIKKTPVLIKKTRS 144

Query: 138 NGSPIKPGEKIERNPTRKKTEQSRKSAVGLTKPSTNGTG-------------KTPPEKNE 197
           +        K E +    K E +    +   K    G G             ++  E   
Sbjct: 145 SAEIELRKVKSEPSDGESKAETAVGDGMPADKNPIGGIGEKKTLTLIGVKKSRSDEEFGV 204

Query: 198 CREKAISST-------PFQDFFDAFDEE----EIEKESFDVKEINL---------PERKK 257
           C EK+I+S        P  D+ D  ++E    E+EK+S D+KEI +         P    
Sbjct: 205 CEEKSITSDVGPAKIPPSDDYIDDDEDEDMEIEVEKKSLDIKEIKVQVQNLKKHSPPPPV 264

Query: 258 IAAETFP-------RNKQNLQRLVDLIMWRDISRSALVFGVGNLVIILCYFMKNMNISFI 317
              +T P       R    LQ  VDL+MWRD S+SA VFGVG   I+   + K++NISFI
Sbjct: 265 NHTKTIPNHFHGVSRTNSKLQSFVDLVMWRDASKSAFVFGVGTFAIVSSSYTKDLNISFI 324

Query: 318 SVISHMGLLYLAAIFVHSSIFGRR--KGMDSDDEHYAIEEEEVIRFAKRLVPFLNQLLQN 377
           SVIS++GL+YLAAIF+  S+  R   +  ++ ++ + + EEE I   K  +P+LN+ L  
Sbjct: 325 SVISYLGLVYLAAIFLFRSLINRGSLEMNNAKNKDFVVGEEEAIWAVKLFLPYLNEFLLK 384

Query: 378 LKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCGFIGVFTLPK--------LITHG 409
           L+ALF GDPS TMKL V LF+LAR GS IT+W + K GFIGVFT+PK        L  +G
Sbjct: 385 LRALFSGDPSTTMKLAVLLFILARCGSSITVWKMAKLGFIGVFTVPKICSTYSSQLTAYG 444

[Close]

BLAST of CmoCh05G012610 vs. NCBI nr
Match: gi|604328873|gb|EYU34355.1| (hypothetical protein MIMGU_mgv1a004061mg [Erythranthe guttata])

HSP 1 Score: 255.4 bits (651), Expect = 1.8e-64
Identity = 179/475 (37.68%), Postives = 251/475 (52.84%), Query Frame = 1


Query: 18  AGSVWESRIRLDEVRGGVKVFNGDDG-----------------NAECGLPVASASPVSGG 77
           AGSVWE+R++LD+V+GG KVFN                     N +     A  SP S G
Sbjct: 25  AGSVWETRMKLDQVKGGFKVFNETPDLENNNTTTVNNPEIQMDNKKTENARAKQSPTSVG 84

Query: 78  -SGRRKTWKSDEGFNS-ILIAEEKPELSSSGDEQSR-------------KSPIPARRLRS 137
            SG+RKTWKSD    S + IA ++ + + + DE S+             K+P+  ++ RS
Sbjct: 85  VSGKRKTWKSDNSEGSPVQIARKRSDSTKNSDESSKELTFSGDGVVGIKKTPVLIKKTRS 144

Query: 138 NGSPIKPGEKIERNPTRKKTEQSRKSAVGLTKPSTNGTG-------------KTPPEKNE 197
           +        K E +    K E +    +   K    G G             ++  E   
Sbjct: 145 SAEIELRKVKSEPSDGESKAETAVGDGMPADKNPIGGIGEKKTLTLIGVKKSRSDEEFGV 204

Query: 198 CREKAISST-------PFQDFFDAFDEE----EIEKESFDVKEINL---------PERKK 257
           C EK+I+S        P  D+ D  ++E    E+EK+S D+KEI +         P    
Sbjct: 205 CEEKSITSDVGPAKIPPSDDYIDDDEDEDMEIEVEKKSLDIKEIKVQVQNLKKHSPPPPV 264

Query: 258 IAAETFP---------RNKQNLQRLVDLIMWRDISRSALVFGVGNLVIILCYFMKNMNIS 317
              +T P         R    LQ  VDL+MWRD S+SA VFGVG   I+   + K++NIS
Sbjct: 265 NHTKTIPTADHFHGVSRTNSKLQSFVDLVMWRDASKSAFVFGVGTFAIVSSSYTKDLNIS 324

Query: 318 FISVISHMGLLYLAAIFVHSSIFGRR--KGMDSDDEHYAIEEEEVIRFAKRLVPFLNQLL 377
           FISVIS++GL+YLAAIF+  S+  R   +  ++ ++ + + EEE I   K  +P+LN+ L
Sbjct: 325 FISVISYLGLVYLAAIFLFRSLINRGSLEMNNAKNKDFVVGEEEAIWAVKLFLPYLNEFL 384

Query: 378 QNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCGFIGVFTLPK--------LIT 409
             L+ALF GDPS TMKL V LF+LAR GS IT+W + K GFIGVFT+PK        L  
Sbjct: 385 LKLRALFSGDPSTTMKLAVLLFILARCGSSITVWKMAKLGFIGVFTVPKICSTYSSQLTA 444

The following BLAST results are available for this feature:

BLAST of CmoCh05G012610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RTNLS_ARATH	4.2e-53	48.65	Reticulon-like protein B21 OS=Arabidopsis thaliana GN=RTNLB21 PE=2 SV=2	[more]
RTNLQ_ARATH	4.8e-25	27.17	Reticulon-like protein B17 OS=Arabidopsis thaliana GN=RTNLB17 PE=2 SV=1	[more]
RTNLR_ARATH	1.8e-24	32.55	Reticulon-like protein B18 OS=Arabidopsis thaliana GN=RTNLB18 PE=2 SV=2	[more]

BLAST of CmoCh05G012610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG57_CUCSA	5.1e-183	77.46	Reticulon-like protein OS=Cucumis sativus GN=Csa_2G009500 PE=4 SV=1	[more]
A0A022R2B2_ERYGU	7.4e-65	37.84	Reticulon-like protein OS=Erythranthe guttata GN=MIMGU_mgv1a004061mg PE=4 SV=1	[more]
A0A022R660_ERYGU	1.3e-64	37.68	Reticulon-like protein OS=Erythranthe guttata GN=MIMGU_mgv1a004061mg PE=4 SV=1	[more]
A0A0A0LTX3_CUCSA	1.7e-56	47.43	Reticulon-like protein OS=Cucumis sativus GN=Csa_1G269900 PE=4 SV=1	[more]
A0A0D2W896_GOSRA	1.3e-53	49.13	Reticulon-like protein OS=Gossypium raimondii GN=B456_013G216600 PE=4 SV=1	[more]

BLAST of CmoCh05G012610 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58000.1	2.4e-54	48.65	Reticulon family protein	[more]
AT2G20590.1	2.7e-26	27.17	Reticulon family protein	[more]
AT4G28430.1	1.0e-25	32.55	Reticulon family protein	[more]

BLAST of CmoCh05G012610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659070755\|ref\|XP_008456496.1\|	6.4e-187	78.57	PREDICTED: reticulon-like protein B21 [Cucumis melo]	[more]
gi\|449442977\|ref\|XP_004139257.1\|	7.3e-183	77.46	PREDICTED: reticulon-like protein B18 [Cucumis sativus]	[more]
gi\|604328874\|gb\|EYU34356.1\|	1.1e-64	37.84	hypothetical protein MIMGU_mgv1a004061mg [Erythranthe guttata]	[more]
gi\|848881535\|ref\|XP_012841125.1\|	1.1e-64	37.84	PREDICTED: reticulon-like protein B21 isoform X2 [Erythranthe guttata]	[more]
gi\|604328873\|gb\|EYU34355.1\|	1.8e-64	37.68	hypothetical protein MIMGU_mgv1a004061mg [Erythranthe guttata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003388	Reticulon

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G012610.1	CmoCh05G012610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 209..351 score: 2.2
IPR003388	Reticulon	PROFILE	PS50845	RETICULON	coord: 208..351 score: 15
None	No IPR available	PANTHER	PTHR10994	RETICULON	coord: 183..415 score: 8.7
None	No IPR available	PANTHER	PTHR10994:SF84	RETICULON-LIKE PROTEIN B21	coord: 183..415 score: 8.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh05G012610	Cucsa.132850	Cucumber (Gy14) v1	cgycmoB0362
CmoCh05G012610	CmaCh10G004770	Cucurbita maxima (Rimu)	cmacmoB095
CmoCh05G012610	CmaCh12G011520	Cucurbita maxima (Rimu)	cmacmoB190
CmoCh05G012610	CmaCh05G012340	Cucurbita maxima (Rimu)	cmacmoB787
CmoCh05G012610	Cla013614	Watermelon (97103) v1	cmowmB757
CmoCh05G012610	Csa2G009500	Cucumber (Chinese Long) v2	cmocuB783
CmoCh05G012610	MELO3C004426	Melon (DHL92) v3.5.1	cmomeB724
CmoCh05G012610	ClCG02G017090	Watermelon (Charleston Gray)	cmowcgB700
CmoCh05G012610	CSPI02G02520	Wild cucumber (PI 183967)	cmocpiB787
CmoCh05G012610	Lsi11G004030	Bottle gourd (USVL1VR-Ls)	cmolsiB706
CmoCh05G012610	Cp4.1LG11g10190	Cucurbita pepo (Zucchini)	cmocpeB721
CmoCh05G012610	Cp4.1LG18g05650	Cucurbita pepo (Zucchini)	cmocpeB730
CmoCh05G012610	Cp4.1LG07g10860	Cucurbita pepo (Zucchini)	cmocpeB751
CmoCh05G012610	MELO3C004426.2	Melon (DHL92) v3.6.1	cmomedB821
CmoCh05G012610	CsaV3_2G003680	Cucumber (Chinese Long) v3	cmocucB0924
CmoCh05G012610	Cla97C02G042790	Watermelon (97103) v2	cmowmbB785
CmoCh05G012610	Bhi06G001543	Wax gourd	cmowgoB0934
CmoCh05G012610	CsGy2G002620	Cucumber (Gy14) v2	cgybcmoB243
CmoCh05G012610	Carg23010	Silver-seed gourd	carcmoB1442
CmoCh05G012610	Carg17443	Silver-seed gourd	carcmoB0357

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh05G012610	CmoCh12G011720	Cucurbita moschata (Rifu)	cmocmoB148

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh05G012610	Wax gourd	cmowgoB0919
CmoCh05G012610	Cucurbita pepo (Zucchini)	cmocpeB742