CmoCh11G013580 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh11G013580
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCalcium-binding protein
LocationCmo_Chr11 : 9443657 .. 9444211 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGATGAACCCAAATCTCCTCGACCTGCAATACAGAGTCTCCAAGAAAAAGTTCCTCCGGGAGCCCTCCCGACTGTTCTCCTTCAAGGACCGGCAGAGCTCCGGCGTCCGGCGGGCTCTGCAACCGAGCACGGAGGAGATCAAGCAGATCTTCAACAAGTTCGACACGAACAGAGACGGGCTGATCTCAAAGCACGAATACAGGGGAGTTCTGAAGGCGCTGGGGAGAGGGAACTCGATGGAGGAGGTGCAGAAGATTTTCAGGGCGGTGGATACCGACGGCGATGGGTACATAAACTTGAATGAGTTCATGGAGGTTCACCGGAGTGGGGACGGAGTTCAGGCGAGAGATGTGGAATTTGCTTTTAAGACGTTTGATTTGAATGGGGATCGGAAGATTAGTGCAGAGGAAATTATGAGAGTGTTGAGGGGATTAGGGGAAAAGTGTAGCATTGAGGATTGCCGGCGGATGGTGAGGGCGGTGGACAGCGACGGCGACGGTATGGTGGACATTGATGAGTTCATGACTATGATGACTCGCTCTGTGATGTAA

mRNA sequence

ATGCCGATGAACCCAAATCTCCTCGACCTGCAATACAGAGTCTCCAAGAAAAAGTTCCTCCGGGAGCCCTCCCGACTGTTCTCCTTCAAGGACCGGCAGAGCTCCGGCGTCCGGCGGGCTCTGCAACCGAGCACGGAGGAGATCAAGCAGATCTTCAACAAGTTCGACACGAACAGAGACGGGCTGATCTCAAAGCACGAATACAGGGGAGTTCTGAAGGCGCTGGGGAGAGGGAACTCGATGGAGGAGGTGCAGAAGATTTTCAGGGCGGTGGATACCGACGGCGATGGGTACATAAACTTGAATGAGTTCATGGAGGTTCACCGGAGTGGGGACGGAGTTCAGGCGAGAGATGTGGAATTTGCTTTTAAGACGTTTGATTTGAATGGGGATCGGAAGATTAGTGCAGAGGAAATTATGAGAGTGTTGAGGGGATTAGGGGAAAAGTGTAGCATTGAGGATTGCCGGCGGATGGTGAGGGCGGTGGACAGCGACGGCGACGGTATGGTGGACATTGATGAGTTCATGACTATGATGACTCGCTCTGTGATGTAA

Coding sequence (CDS)

ATGCCGATGAACCCAAATCTCCTCGACCTGCAATACAGAGTCTCCAAGAAAAAGTTCCTCCGGGAGCCCTCCCGACTGTTCTCCTTCAAGGACCGGCAGAGCTCCGGCGTCCGGCGGGCTCTGCAACCGAGCACGGAGGAGATCAAGCAGATCTTCAACAAGTTCGACACGAACAGAGACGGGCTGATCTCAAAGCACGAATACAGGGGAGTTCTGAAGGCGCTGGGGAGAGGGAACTCGATGGAGGAGGTGCAGAAGATTTTCAGGGCGGTGGATACCGACGGCGATGGGTACATAAACTTGAATGAGTTCATGGAGGTTCACCGGAGTGGGGACGGAGTTCAGGCGAGAGATGTGGAATTTGCTTTTAAGACGTTTGATTTGAATGGGGATCGGAAGATTAGTGCAGAGGAAATTATGAGAGTGTTGAGGGGATTAGGGGAAAAGTGTAGCATTGAGGATTGCCGGCGGATGGTGAGGGCGGTGGACAGCGACGGCGACGGTATGGTGGACATTGATGAGTTCATGACTATGATGACTCGCTCTGTGATGTAA
Homology
[Close]
BLAST of CmoCh11G013580 vs. Swiss-Prot
Match: CML1_ARATH (Calmodulin-like protein 1 OS=Arabidopsis thaliana GN=CML1 PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 4.1e-50
Identity = 97/182 (53.30%), Postives = 142/182 (78.02%), Query Frame = 1 

Query: 4   NPNLLDLQYRVSKKKFLREPSRLFSFKDRQSSGVRRA-----LQPSTEEIKQIFNKFDTN 63
           N + L+LQY++SK K LR+PSR+FS +DRQSSG+         QPS  E++++F++FD +
Sbjct: 3   NVSFLELQYKLSKNKMLRKPSRMFS-RDRQSSGLSSPGPGGFSQPSVNEMRRVFSRFDLD 62

Query: 64  RDGLISKHEYRGVLKALGRGNSMEEVQKIFRAVDTDGDGYINLNEFMEVHRSGDGVQARD 123
           +DG IS+ EY+ VL+ALG+  ++E+V KIF+AVD DGDG+I+  EF++ ++   G+++ D
Sbjct: 63  KDGKISQTEYKVVLRALGQERAIEDVPKIFKAVDLDGDGFIDFREFIDAYKRSGGIRSSD 122

Query: 124 VEFAFKTFDLNGDRKISAEEIMRVLRGLGEKCSIEDCRRMVRAVDSDGDGMVDIDEFMTM 181
           +  +F TFDLNGD KISAEE+M VL  LGE+CS+EDC RMVRAVD+DGDG+V+++EF+ M
Sbjct: 123 IRNSFWTFDLNGDGKISAEEVMSVLWKLGERCSLEDCNRMVRAVDADGDGLVNMEEFIKM 182

[Close]
BLAST of CmoCh11G013580 vs. Swiss-Prot
Match: CML23_ARATH (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-28
Identity = 66/150 (44.00%), Postives = 96/150 (64.00%), Query Frame = 1 

Query: 34  SSGVRRALQPSTEEIKQIFNKFDTNRDGLISKHEYRGVLKALGRGNSMEEVQKIFRAVDT 93
           S  V R    S E+IK++F +FD N DG IS  E + V+ AL    S EE + + +  D 
Sbjct: 2   SKNVSRNCLGSMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDL 61

Query: 94  DGDGYINLNEFMEVHR----SGDGVQARDVEFAFKTFDLNGDRKISAEEIMRVLRGLGEK 153
           DG+G+I+L+EF+ + +    S +    RD++ AF  +DL+ + +ISA E+  V++ LGEK
Sbjct: 62  DGNGFIDLDEFVALFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEK 121

Query: 154 CSIEDCRRMVRAVDSDGDGMVDIDEFMTMM 180
           CSI+DC+RM+  VDSDGDG VD +EF  MM
Sbjct: 122 CSIQDCQRMINKVDSDGDGCVDFEEFKKMM 151

[Close]
BLAST of CmoCh11G013580 vs. Swiss-Prot
Match: CML24_ARATH (Calcium-binding protein CML24 OS=Arabidopsis thaliana GN=CML24 PE=2 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-27
Identity = 63/152 (41.45%), Postives = 100/152 (65.79%), Query Frame = 1 

Query: 35  SGVRRALQPSTEEIKQIFNKFDTNRDGLISKHEYRGVLKALGRGNSMEEVQKIFRAVDTD 94
           +GV R+   S ++IK++F +FD N DG IS  E + V++AL    S EE   + +  D D
Sbjct: 5   NGVVRSCLGSMDDIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLD 64

Query: 95  GDGYINLNEFMEVHRSGDGV------QARDVEFAFKTFDLNGDRKISAEEIMRVLRGLGE 154
           G+G+I+L+EF+ + + G G          D++ AF+ +DL+G+ +ISA+E+  V++ LGE
Sbjct: 65  GNGFIDLDEFVALFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGE 124

Query: 155 KCSIEDCRRMVRAVDSDGDGMVDIDEFMTMMT 181
           KCS++DC++M+  VD DGDG V+ DEF  MM+
Sbjct: 125 KCSVQDCKKMISKVDIDGDGCVNFDEFKKMMS 156

[Close]
BLAST of CmoCh11G013580 vs. Swiss-Prot
Match: CML27_ARATH (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana GN=CML27 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.2e-27
Identity = 64/137 (46.72%), Postives = 89/137 (64.96%), Query Frame = 1 

Query: 46  EEIKQIFNKFDTNRDGLISKHEYRGVLKALGRGNSMEEVQKIFRAVDTDGDGYINLNEFM 105
           EE+K++F++FD+N DG IS  E  GV KA+G   +  E+ ++   VDTD DGYINL+EF 
Sbjct: 22  EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 106 EVHRSGDGVQARDVEFAFKTFDLNGDRKISAEEIMRVLRGLGEKCSIEDCRRMVRAVDSD 165
            + RS     A ++  AF  +D + +  ISA E+ +VL  LG  CS+EDC RM+  VD+D
Sbjct: 82  TLCRSSS--SAAEIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMIGPVDAD 141

Query: 166 GDGMVDIDEFMTMMTRS 183
           GDG V+ +EF  MMT S
Sbjct: 142 GDGNVNFEEFQKMMTSS 156

[Close]
BLAST of CmoCh11G013580 vs. Swiss-Prot
Match: CML25_ARATH (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.7e-27
Identity = 60/144 (41.67%), Postives = 89/144 (61.81%), Query Frame = 1 

Query: 39  RALQPSTEEIKQIFNKFDTNRDGLISKHEYRGVLKALGRGNSMEEVQKIFRAVDTDGDGY 98
           R+ +    E++ +F KFD N DG IS  E   ++ +LG     EE++K    +D  GDGY
Sbjct: 29  RSGKTEIRELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGY 88

Query: 99  INLNEFMEVHRSG--DGVQARDVEFAFKTFDLNGDRKISAEEIMRVLRGLGEKCSIEDCR 158
           IN  EF+E++  G        +++ AF  +D++G+  ISAEE+  VLR LG++CSI +CR
Sbjct: 89  INFEEFVELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSIAECR 148

Query: 159 RMVRAVDSDGDGMVDIDEFMTMMT 181
           +M+  VD DGDG +D +EF  MMT
Sbjct: 149 KMIGGVDKDGDGTIDFEEFKIMMT 172

[Close]
BLAST of CmoCh11G013580 vs. TrEMBL
Match: A0A0A0K804_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073720 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 3.7e-90
Identity = 166/182 (91.21%), Postives = 178/182 (97.80%), Query Frame = 1 

Query: 1   MPMNPNLLDLQYRVSKKKFLREPSRLFSFKDRQSSGVRRALQPSTEEIKQIFNKFDTNRD 60
           MP+NPN L+LQY VSKKKFLREPSRLFSFKDRQSSG+RRALQPS+EEIKQIFNKFDTN+D
Sbjct: 1   MPINPNFLELQYNVSKKKFLREPSRLFSFKDRQSSGLRRALQPSSEEIKQIFNKFDTNKD 60

Query: 61  GLISKHEYRGVLKALGRGNSMEEVQKIFRAVDTDGDGYINLNEFMEVHRSGDGVQARDVE 120
           G ISKHEYRG+LKALGRGNSMEEVQKIFRAVD+DGDGYINLNEFMEVHRSG GVQA++VE
Sbjct: 61  GRISKHEYRGILKALGRGNSMEEVQKIFRAVDSDGDGYINLNEFMEVHRSGGGVQAKEVE 120

Query: 121 FAFKTFDLNGDRKISAEEIMRVLRGLGEKCSIEDCRRMVRAVDSDGDGMVDIDEFMTMMT 180
           FAFKTFDLNGDRKISAEE+MRVL+GLGEKCSIEDCRRMVRAVDSDGDGMVDI+EFMTMMT
Sbjct: 121 FAFKTFDLNGDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDSDGDGMVDINEFMTMMT 180

Query: 181 RS 183
           RS
Sbjct: 181 RS 182

[Close]
BLAST of CmoCh11G013580 vs. TrEMBL
Match: M5VNS5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011990mg PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 3.3e-62
Identity = 114/178 (64.04%), Postives = 148/178 (83.15%), Query Frame = 1 

Query: 6   NLLDLQYRVSKKKFLREPSRLFSFKDRQSSGVRRALQPSTEEIKQIFNKFDTNRDGLISK 65
           N LD QY +SK+KFLR+PS +FSF+DRQ+SGV  + +P+  E+K++F+KFD+N+DG IS+
Sbjct: 5   NFLDFQYNLSKRKFLRKPSHVFSFRDRQNSGVSPSFEPNPNEMKRVFDKFDSNKDGKISQ 64

Query: 66  HEYRGVLKALGRGNSMEEVQKIFRAVDTDGDGYINLNEFMEVHRSGDGVQARDVEFAFKT 125
            EY+ +L+ALG+GN + EV KIFR  D DGDG+IN  EFMEVH+ G G++  D++ AF+T
Sbjct: 65  PEYKAILRALGKGNMVGEVPKIFRIADLDGDGFINFKEFMEVHKKGGGIRTIDIQNAFRT 124

Query: 126 FDLNGDRKISAEEIMRVLRGLGEKCSIEDCRRMVRAVDSDGDGMVDIDEFMTMMTRSV 184
           FDLNGD KISAEE+M VL  LGE CS+EDC+RMVRAVD+DGDG+VDIDEFMTMMTRS+
Sbjct: 125 FDLNGDGKISAEEVMEVLGRLGESCSLEDCQRMVRAVDTDGDGVVDIDEFMTMMTRSM 182

[Close]
BLAST of CmoCh11G013580 vs. TrEMBL
Match: B9HS04_POPTR (Calmodulin-related family protein OS=Populus trichocarpa GN=POPTR_0009s10530g PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 9.8e-59
Identity = 109/180 (60.56%), Postives = 146/180 (81.11%), Query Frame = 1 

Query: 4   NPNLLDLQYRVSKKKFLREPSRLFSFKDRQSSGVRRALQPSTEEIKQIFNKFDTNRDGLI 63
           N + L+ QY++S+ KFLR+PSRLFS +DRQSSG+    QP+ +E++Q+F+KFD+N+DG I
Sbjct: 3   NLSFLEFQYKLSRNKFLRKPSRLFSSRDRQSSGMLSTFQPNMKEMRQVFDKFDSNKDGKI 62

Query: 64  SKHEYRGVLKALGRGNSMEEVQKIFRAVDTDGDGYINLNEFMEVHRSGDGVQARDVEFAF 123
           S+ EY+  L+ALG+GN + EV KIF+ VD DGDG+I+  EF+E  + G G++  D++ AF
Sbjct: 63  SQQEYKDTLRALGQGNMLGEVPKIFQVVDLDGDGFIDFKEFVEAQKKGGGIRTTDIQTAF 122

Query: 124 KTFDLNGDRKISAEEIMRVLRGLGEKCSIEDCRRMVRAVDSDGDGMVDIDEFMTMMTRSV 183
           +TFD NGD KISAEE+M VLR LGE+CS+EDCRRMV AVD DGDGMV++DEFMTMMTRS+
Sbjct: 123 QTFDSNGDGKISAEEVMEVLRRLGERCSLEDCRRMVNAVDIDGDGMVNMDEFMTMMTRSM 182

[Close]
BLAST of CmoCh11G013580 vs. TrEMBL
Match: V4SBR8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029360mg PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.7e-56
Identity = 104/180 (57.78%), Postives = 143/180 (79.44%), Query Frame = 1 

Query: 4   NPNLLDLQYRVSKKKFLREPSRLFSFKDRQSSGVRRALQPSTEEIKQIFNKFDTNRDGLI 63
           N + LD QY++SK KFLR+PSRLFS +DRQ+S +    Q    E+K++F++FD+N+DG I
Sbjct: 3   NLSFLDFQYKISKNKFLRKPSRLFSSRDRQNSSLLPTFQADRNEMKRVFDRFDSNKDGKI 62

Query: 64  SKHEYRGVLKALGRGNSMEEVQKIFRAVDTDGDGYINLNEFMEVHRSGDGVQARDVEFAF 123
           S+ EY+ +L+A+G+ + + EV KIF+ VD DGDG+I+  EFME H+ G G++  D++ AF
Sbjct: 63  SQMEYKAILRAIGQASMISEVPKIFQVVDLDGDGFIDFKEFMEAHKKGGGIRTMDIQSAF 122

Query: 124 KTFDLNGDRKISAEEIMRVLRGLGEKCSIEDCRRMVRAVDSDGDGMVDIDEFMTMMTRSV 183
           +TFD N D KISAEEI+ +LR LGE CS+EDCR+MVRAVD+DGDGMV++DEFMTMMTRS+
Sbjct: 123 RTFDKNDDGKISAEEILEMLRRLGESCSLEDCRKMVRAVDTDGDGMVNMDEFMTMMTRSM 182

[Close]
BLAST of CmoCh11G013580 vs. TrEMBL
Match: A0A067F0V1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041237mg PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.7e-56
Identity = 104/180 (57.78%), Postives = 143/180 (79.44%), Query Frame = 1 

Query: 4   NPNLLDLQYRVSKKKFLREPSRLFSFKDRQSSGVRRALQPSTEEIKQIFNKFDTNRDGLI 63
           N + LD QY++SK KFLR+PSRLFS +DRQ+S +    Q    E+K++F++FD+N+DG I
Sbjct: 3   NLSFLDFQYKISKNKFLRKPSRLFSSRDRQNSSLLPTFQADRNEMKRVFDRFDSNKDGKI 62

Query: 64  SKHEYRGVLKALGRGNSMEEVQKIFRAVDTDGDGYINLNEFMEVHRSGDGVQARDVEFAF 123
           S+ EY+ +L+A+G+ + + EV KIF+ VD DGDG+I+  EFME H+ G G++  D++ AF
Sbjct: 63  SQMEYKAILRAIGQASMISEVPKIFQVVDLDGDGFIDFKEFMEAHKKGGGIRTMDIQSAF 122

Query: 124 KTFDLNGDRKISAEEIMRVLRGLGEKCSIEDCRRMVRAVDSDGDGMVDIDEFMTMMTRSV 183
           +TFD N D KISAEEI+ +LR LGE CS+EDCR+MVRAVD+DGDGMV++DEFMTMMTRS+
Sbjct: 123 RTFDKNDDGKISAEEILEMLRRLGESCSLEDCRKMVRAVDTDGDGMVNMDEFMTMMTRSM 182

[Close]
BLAST of CmoCh11G013580 vs. TAIR10
Match: AT2G15680.1 (AT2G15680.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 199.1 bits (505), Expect = 2.3e-51
Identity = 97/182 (53.30%), Postives = 142/182 (78.02%), Query Frame = 1 

Query: 4   NPNLLDLQYRVSKKKFLREPSRLFSFKDRQSSGVRRA-----LQPSTEEIKQIFNKFDTN 63
           N + L+LQY++SK K LR+PSR+FS +DRQSSG+         QPS  E++++F++FD +
Sbjct: 3   NVSFLELQYKLSKNKMLRKPSRMFS-RDRQSSGLSSPGPGGFSQPSVNEMRRVFSRFDLD 62

Query: 64  RDGLISKHEYRGVLKALGRGNSMEEVQKIFRAVDTDGDGYINLNEFMEVHRSGDGVQARD 123
           +DG IS+ EY+ VL+ALG+  ++E+V KIF+AVD DGDG+I+  EF++ ++   G+++ D
Sbjct: 63  KDGKISQTEYKVVLRALGQERAIEDVPKIFKAVDLDGDGFIDFREFIDAYKRSGGIRSSD 122

Query: 124 VEFAFKTFDLNGDRKISAEEIMRVLRGLGEKCSIEDCRRMVRAVDSDGDGMVDIDEFMTM 181
           +  +F TFDLNGD KISAEE+M VL  LGE+CS+EDC RMVRAVD+DGDG+V+++EF+ M
Sbjct: 123 IRNSFWTFDLNGDGKISAEEVMSVLWKLGERCSLEDCNRMVRAVDADGDGLVNMEEFIKM 182

[Close]
BLAST of CmoCh11G013580 vs. TAIR10
Match: AT1G66400.1 (AT1G66400.1 calmodulin like 23)

HSP 1 Score: 127.5 bits (319), Expect = 8.6e-30
Identity = 66/150 (44.00%), Postives = 96/150 (64.00%), Query Frame = 1 

Query: 34  SSGVRRALQPSTEEIKQIFNKFDTNRDGLISKHEYRGVLKALGRGNSMEEVQKIFRAVDT 93
           S  V R    S E+IK++F +FD N DG IS  E + V+ AL    S EE + + +  D 
Sbjct: 2   SKNVSRNCLGSMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDL 61

Query: 94  DGDGYINLNEFMEVHR----SGDGVQARDVEFAFKTFDLNGDRKISAEEIMRVLRGLGEK 153
           DG+G+I+L+EF+ + +    S +    RD++ AF  +DL+ + +ISA E+  V++ LGEK
Sbjct: 62  DGNGFIDLDEFVALFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEK 121

Query: 154 CSIEDCRRMVRAVDSDGDGMVDIDEFMTMM 180
           CSI+DC+RM+  VDSDGDG VD +EF  MM
Sbjct: 122 CSIQDCQRMINKVDSDGDGCVDFEEFKKMM 151

[Close]
BLAST of CmoCh11G013580 vs. TAIR10
Match: AT5G37770.1 (AT5G37770.1 EF hand calcium-binding protein family)

HSP 1 Score: 124.4 bits (311), Expect = 7.3e-29
Identity = 63/152 (41.45%), Postives = 100/152 (65.79%), Query Frame = 1 

Query: 35  SGVRRALQPSTEEIKQIFNKFDTNRDGLISKHEYRGVLKALGRGNSMEEVQKIFRAVDTD 94
           +GV R+   S ++IK++F +FD N DG IS  E + V++AL    S EE   + +  D D
Sbjct: 5   NGVVRSCLGSMDDIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLD 64

Query: 95  GDGYINLNEFMEVHRSGDGV------QARDVEFAFKTFDLNGDRKISAEEIMRVLRGLGE 154
           G+G+I+L+EF+ + + G G          D++ AF+ +DL+G+ +ISA+E+  V++ LGE
Sbjct: 65  GNGFIDLDEFVALFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGE 124

Query: 155 KCSIEDCRRMVRAVDSDGDGMVDIDEFMTMMT 181
           KCS++DC++M+  VD DGDG V+ DEF  MM+
Sbjct: 125 KCSVQDCKKMISKVDIDGDGCVNFDEFKKMMS 156

[Close]
BLAST of CmoCh11G013580 vs. TAIR10
Match: AT1G18210.1 (AT1G18210.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 123.6 bits (309), Expect = 1.2e-28
Identity = 64/137 (46.72%), Postives = 89/137 (64.96%), Query Frame = 1 

Query: 46  EEIKQIFNKFDTNRDGLISKHEYRGVLKALGRGNSMEEVQKIFRAVDTDGDGYINLNEFM 105
           EE+K++F++FD+N DG IS  E  GV KA+G   +  E+ ++   VDTD DGYINL+EF 
Sbjct: 22  EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 106 EVHRSGDGVQARDVEFAFKTFDLNGDRKISAEEIMRVLRGLGEKCSIEDCRRMVRAVDSD 165
            + RS     A ++  AF  +D + +  ISA E+ +VL  LG  CS+EDC RM+  VD+D
Sbjct: 82  TLCRSSS--SAAEIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMIGPVDAD 141

Query: 166 GDGMVDIDEFMTMMTRS 183
           GDG V+ +EF  MMT S
Sbjct: 142 GDGNVNFEEFQKMMTSS 156

[Close]
BLAST of CmoCh11G013580 vs. TAIR10
Match: AT1G24620.1 (AT1G24620.1 EF hand calcium-binding protein family)

HSP 1 Score: 122.9 bits (307), Expect = 2.1e-28
Identity = 60/144 (41.67%), Postives = 89/144 (61.81%), Query Frame = 1 

Query: 39  RALQPSTEEIKQIFNKFDTNRDGLISKHEYRGVLKALGRGNSMEEVQKIFRAVDTDGDGY 98
           R+ +    E++ +F KFD N DG IS  E   ++ +LG     EE++K    +D  GDGY
Sbjct: 29  RSGKTEIRELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGY 88

Query: 99  INLNEFMEVHRSG--DGVQARDVEFAFKTFDLNGDRKISAEEIMRVLRGLGEKCSIEDCR 158
           IN  EF+E++  G        +++ AF  +D++G+  ISAEE+  VLR LG++CSI +CR
Sbjct: 89  INFEEFVELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSIAECR 148

Query: 159 RMVRAVDSDGDGMVDIDEFMTMMT 181
           +M+  VD DGDG +D +EF  MMT
Sbjct: 149 KMIGGVDKDGDGTIDFEEFKIMMT 172

[Close]
BLAST of CmoCh11G013580 vs. NCBI nr
Match: gi|778725125|ref|XP_004137114.2| (PREDICTED: calmodulin-like protein 1 [Cucumis sativus])

HSP 1 Score: 339.0 bits (868), Expect = 5.3e-90
Identity = 166/182 (91.21%), Postives = 178/182 (97.80%), Query Frame = 1 

Query: 1   MPMNPNLLDLQYRVSKKKFLREPSRLFSFKDRQSSGVRRALQPSTEEIKQIFNKFDTNRD 60
           MP+NPN L+LQY VSKKKFLREPSRLFSFKDRQSSG+RRALQPS+EEIKQIFNKFDTN+D
Sbjct: 1   MPINPNFLELQYNVSKKKFLREPSRLFSFKDRQSSGLRRALQPSSEEIKQIFNKFDTNKD 60

Query: 61  GLISKHEYRGVLKALGRGNSMEEVQKIFRAVDTDGDGYINLNEFMEVHRSGDGVQARDVE 120
           G ISKHEYRG+LKALGRGNSMEEVQKIFRAVD+DGDGYINLNEFMEVHRSG GVQA++VE
Sbjct: 61  GRISKHEYRGILKALGRGNSMEEVQKIFRAVDSDGDGYINLNEFMEVHRSGGGVQAKEVE 120

Query: 121 FAFKTFDLNGDRKISAEEIMRVLRGLGEKCSIEDCRRMVRAVDSDGDGMVDIDEFMTMMT 180
           FAFKTFDLNGDRKISAEE+MRVL+GLGEKCSIEDCRRMVRAVDSDGDGMVDI+EFMTMMT
Sbjct: 121 FAFKTFDLNGDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDSDGDGMVDINEFMTMMT 180

Query: 181 RS 183
           RS
Sbjct: 181 RS 182

[Close]
BLAST of CmoCh11G013580 vs. NCBI nr
Match: gi|659109907|ref|XP_008454944.1| (PREDICTED: calmodulin-like protein 1 [Cucumis melo])

HSP 1 Score: 337.8 bits (865), Expect = 1.2e-89
Identity = 166/182 (91.21%), Postives = 177/182 (97.25%), Query Frame = 1 

Query: 1   MPMNPNLLDLQYRVSKKKFLREPSRLFSFKDRQSSGVRRALQPSTEEIKQIFNKFDTNRD 60
           MP+NPN LDLQY VSKKKFLREPSRLFSFKDRQSSG+RRALQPS EEIKQIFNKFDTN+D
Sbjct: 1   MPINPNFLDLQYNVSKKKFLREPSRLFSFKDRQSSGLRRALQPSLEEIKQIFNKFDTNKD 60

Query: 61  GLISKHEYRGVLKALGRGNSMEEVQKIFRAVDTDGDGYINLNEFMEVHRSGDGVQARDVE 120
           G ISKHEYRG+LKALGRG+SMEEVQKIFRAVD+DGDGYINLNEFMEVHRSG GVQA++VE
Sbjct: 61  GRISKHEYRGILKALGRGSSMEEVQKIFRAVDSDGDGYINLNEFMEVHRSGGGVQAKEVE 120

Query: 121 FAFKTFDLNGDRKISAEEIMRVLRGLGEKCSIEDCRRMVRAVDSDGDGMVDIDEFMTMMT 180
           FAFKTFDLNGDRKISAEE+MRVL+GLGEKCSIEDCRRMVRAVDSDGDGMVDI+EFMTMMT
Sbjct: 121 FAFKTFDLNGDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDSDGDGMVDINEFMTMMT 180

Query: 181 RS 183
           RS
Sbjct: 181 RS 182

[Close]
BLAST of CmoCh11G013580 vs. NCBI nr
Match: gi|595798018|ref|XP_007201342.1| (hypothetical protein PRUPE_ppa011990mg [Prunus persica])

HSP 1 Score: 246.1 bits (627), Expect = 4.7e-62
Identity = 114/178 (64.04%), Postives = 148/178 (83.15%), Query Frame = 1 

Query: 6   NLLDLQYRVSKKKFLREPSRLFSFKDRQSSGVRRALQPSTEEIKQIFNKFDTNRDGLISK 65
           N LD QY +SK+KFLR+PS +FSF+DRQ+SGV  + +P+  E+K++F+KFD+N+DG IS+
Sbjct: 5   NFLDFQYNLSKRKFLRKPSHVFSFRDRQNSGVSPSFEPNPNEMKRVFDKFDSNKDGKISQ 64

Query: 66  HEYRGVLKALGRGNSMEEVQKIFRAVDTDGDGYINLNEFMEVHRSGDGVQARDVEFAFKT 125
            EY+ +L+ALG+GN + EV KIFR  D DGDG+IN  EFMEVH+ G G++  D++ AF+T
Sbjct: 65  PEYKAILRALGKGNMVGEVPKIFRIADLDGDGFINFKEFMEVHKKGGGIRTIDIQNAFRT 124

Query: 126 FDLNGDRKISAEEIMRVLRGLGEKCSIEDCRRMVRAVDSDGDGMVDIDEFMTMMTRSV 184
           FDLNGD KISAEE+M VL  LGE CS+EDC+RMVRAVD+DGDG+VDIDEFMTMMTRS+
Sbjct: 125 FDLNGDGKISAEEVMEVLGRLGESCSLEDCQRMVRAVDTDGDGVVDIDEFMTMMTRSM 182

[Close]
BLAST of CmoCh11G013580 vs. NCBI nr
Match: gi|645261897|ref|XP_008236514.1| (PREDICTED: calmodulin-like protein 1 [Prunus mume])

HSP 1 Score: 244.2 bits (622), Expect = 1.8e-61
Identity = 112/178 (62.92%), Postives = 147/178 (82.58%), Query Frame = 1 

Query: 6   NLLDLQYRVSKKKFLREPSRLFSFKDRQSSGVRRALQPSTEEIKQIFNKFDTNRDGLISK 65
           N LD Q+ +SK+KFLR+PS + SF+DRQ+SG+  + +P+  E+K +F KFD+N+DG IS+
Sbjct: 5   NFLDFQFNLSKRKFLRKPSHVCSFRDRQNSGLSPSFEPNPNEMKIVFEKFDSNKDGKISQ 64

Query: 66  HEYRGVLKALGRGNSMEEVQKIFRAVDTDGDGYINLNEFMEVHRSGDGVQARDVEFAFKT 125
            EY+ +L+ALG+GN++ EV KIFR  D DGDG+IN  EFMEVH+ G G++  D++ AF+T
Sbjct: 65  EEYKAILRALGKGNTVREVPKIFRIADLDGDGFINFKEFMEVHKKGGGIRTMDIQNAFRT 124

Query: 126 FDLNGDRKISAEEIMRVLRGLGEKCSIEDCRRMVRAVDSDGDGMVDIDEFMTMMTRSV 184
           FDLNGD KISAEE+M VLR LGE CS+EDC+RMVRAVD+DGDG+VDIDEFMTMMTRS+
Sbjct: 125 FDLNGDGKISAEEVMEVLRRLGESCSLEDCQRMVRAVDTDGDGVVDIDEFMTMMTRSM 182

[Close]
BLAST of CmoCh11G013580 vs. NCBI nr
Match: gi|657963113|ref|XP_008373157.1| (PREDICTED: calmodulin-like protein 1 [Malus domestica])

HSP 1 Score: 242.7 bits (618), Expect = 5.2e-61
Identity = 113/180 (62.78%), Postives = 148/180 (82.22%), Query Frame = 1 

Query: 4   NPNLLDLQYRVSKKKFLREPSRLFSFKDRQSSGVRRALQPSTEEIKQIFNKFDTNRDGLI 63
           N N LD QY +SK+KFLR+PS++FSF+DRQ SG+    +P+  E+K++F KFD+N+DG I
Sbjct: 3   NANFLDFQYNLSKRKFLRKPSQMFSFRDRQYSGIAPTFEPNPNEMKKVFEKFDSNKDGKI 62

Query: 64  SKHEYRGVLKALGRGNSMEEVQKIFRAVDTDGDGYINLNEFMEVHRSGDGVQARDVEFAF 123
           S+ EY+ +L+ALG+GN + EV KIF+ VD D DG+IN  EFMEVH+ G G++  D++ AF
Sbjct: 63  SQAEYKAILRALGKGNMIGEVPKIFKFVDLDEDGFINFKEFMEVHKKG-GIRTMDIQNAF 122

Query: 124 KTFDLNGDRKISAEEIMRVLRGLGEKCSIEDCRRMVRAVDSDGDGMVDIDEFMTMMTRSV 183
           + FDLNGD KISAEE+M VLRGL E+C++EDCRRMVRAVD+DGDGMVD+DEFMTMMTRS+
Sbjct: 123 RMFDLNGDGKISAEEVMEVLRGLEERCNLEDCRRMVRAVDTDGDGMVDLDEFMTMMTRSM 181

The following BLAST results are available for this feature:
BLAST of CmoCh11G013580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CML1_ARATH4.1e-5053.30Calmodulin-like protein 1 OS=Arabidopsis thaliana GN=CML1 PE=2 SV=1[more]
CML23_ARATH1.5e-2844.00Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=... [more]
CML24_ARATH1.3e-2741.45Calcium-binding protein CML24 OS=Arabidopsis thaliana GN=CML24 PE=2 SV=2[more]
CML27_ARATH2.2e-2746.72Probable calcium-binding protein CML27 OS=Arabidopsis thaliana GN=CML27 PE=1 SV=... [more]
CML25_ARATH3.7e-2741.67Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=... [more]
BLAST of CmoCh11G013580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K804_CUCSA3.7e-9091.21Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073720 PE=4 SV=1[more]
M5VNS5_PRUPE3.3e-6264.04Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011990mg PE=4 SV=1[more]
B9HS04_POPTR9.8e-5960.56Calmodulin-related family protein OS=Populus trichocarpa GN=POPTR_0009s10530g PE... [more]
V4SBR8_9ROSI2.7e-5657.78Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029360mg PE=4 SV=1[more]
A0A067F0V1_CITSI2.7e-5657.78Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041237mg PE=4 SV=1[more]
BLAST of CmoCh11G013580 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G15680.12.3e-5153.30 Calcium-binding EF-hand family protein[more]
AT1G66400.18.6e-3044.00 calmodulin like 23[more]
AT5G37770.17.3e-2941.45 EF hand calcium-binding protein family[more]
AT1G18210.11.2e-2846.72 Calcium-binding EF-hand family protein[more]
AT1G24620.12.1e-2841.67 EF hand calcium-binding protein family[more]
BLAST of CmoCh11G013580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778725125|ref|XP_004137114.2|5.3e-9091.21PREDICTED: calmodulin-like protein 1 [Cucumis sativus][more]
gi|659109907|ref|XP_008454944.1|1.2e-8991.21PREDICTED: calmodulin-like protein 1 [Cucumis melo][more]
gi|595798018|ref|XP_007201342.1|4.7e-6264.04hypothetical protein PRUPE_ppa011990mg [Prunus persica][more]
gi|645261897|ref|XP_008236514.1|1.8e-6162.92PREDICTED: calmodulin-like protein 1 [Prunus mume][more]
gi|657963113|ref|XP_008373157.1|5.2e-6162.78PREDICTED: calmodulin-like protein 1 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G013580.1CmoCh11G013580.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 46..106
score: 6.9E-15coord: 119..179
score: 1.1
IPR002048EF-hand domainSMARTSM00054efh_1coord: 118..146
score: 0.0024coord: 154..182
score: 0.0063coord: 83..111
score: 2.3E-5coord: 47..75
score: 3.
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 150..184
score: 11.194coord: 118..149
score: 12.477coord: 79..114
score: 14.179coord: 43..78
score: 15
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 130..181
score: 9.8E-20coord: 45..129
score: 2.2
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 45..181
score: 5.0
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 163..175
score: -coord: 127..139
score: -coord: 56..68
score: -coord: 92..104
scor
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 42..181
score: 9.7
NoneNo IPR availablePANTHERPTHR10891:SF533SUBFAMILY NOT NAMEDcoord: 42..181
score: 9.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh11G013580Cucsa.219910Cucumber (Gy14) v1cgycmoB0624
CmoCh11G013580Cla016007Watermelon (97103) v1cmowmB109
CmoCh11G013580Csa7G073720Cucumber (Chinese Long) v2cmocuB137
CmoCh11G013580MELO3C018445Melon (DHL92) v3.5.1cmomeB085
CmoCh11G013580ClCG02G005880Watermelon (Charleston Gray)cmowcgB088
CmoCh11G013580CSPI07G07690Wild cucumber (PI 183967)cmocpiB136
CmoCh11G013580Lsi03G004870Bottle gourd (USVL1VR-Ls)cmolsiB103
CmoCh11G013580Cp4.1LG15g04910Cucurbita pepo (Zucchini)cmocpeB095
CmoCh11G013580Cp4.1LG04g08070Cucurbita pepo (Zucchini)cmocpeB126
CmoCh11G013580MELO3C018445.2Melon (DHL92) v3.6.1cmomedB091
CmoCh11G013580CsaV3_7G008650Cucumber (Chinese Long) v3cmocucB0160
CmoCh11G013580Cla97C02G032860Watermelon (97103) v2cmowmbB088
CmoCh11G013580Bhi05G000996Wax gourdcmowgoB0119
CmoCh11G013580CsGy7G007250Cucumber (Gy14) v2cgybcmoB881
CmoCh11G013580Carg20367Silver-seed gourdcarcmoB0728
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh11G013580Cucumber (Chinese Long) v3cmocucB0133
CmoCh11G013580Cucumber (Chinese Long) v3cmocucB0136
CmoCh11G013580Cucumber (Chinese Long) v3cmocucB0146
CmoCh11G013580Watermelon (97103) v2cmowmbB078
CmoCh11G013580Watermelon (97103) v2cmowmbB111
CmoCh11G013580Watermelon (97103) v2cmowmbB128
CmoCh11G013580Wax gourdcmowgoB0104
CmoCh11G013580Wax gourdcmowgoB0124
CmoCh11G013580Cucurbita moschata (Rifu)cmocmoB131
CmoCh11G013580Cucurbita moschata (Rifu)cmocmoB105
CmoCh11G013580Cucurbita moschata (Rifu)cmocmoB110
CmoCh11G013580Cucurbita moschata (Rifu)cmocmoB125
CmoCh11G013580Cucumber (Gy14) v1cgycmoB0684
CmoCh11G013580Cucurbita maxima (Rimu)cmacmoB117
CmoCh11G013580Cucurbita maxima (Rimu)cmacmoB494
CmoCh11G013580Cucurbita maxima (Rimu)cmacmoB678
CmoCh11G013580Cucurbita maxima (Rimu)cmacmoB842
CmoCh11G013580Bottle gourd (USVL1VR-Ls)cmolsiB093
CmoCh11G013580Cucumber (Chinese Long) v2cmocuB107
CmoCh11G013580Cucumber (Chinese Long) v2cmocuB117
CmoCh11G013580Melon (DHL92) v3.5.1cmomeB114
CmoCh11G013580Melon (DHL92) v3.5.1cmomeB128
CmoCh11G013580Melon (DHL92) v3.5.1cmomeB133
CmoCh11G013580Watermelon (Charleston Gray)cmowcgB086
CmoCh11G013580Watermelon (Charleston Gray)cmowcgB109
CmoCh11G013580Watermelon (Charleston Gray)cmowcgB123
CmoCh11G013580Watermelon (97103) v1cmowmB081
CmoCh11G013580Watermelon (97103) v1cmowmB098
CmoCh11G013580Watermelon (97103) v1cmowmB106
CmoCh11G013580Cucurbita pepo (Zucchini)cmocpeB092
CmoCh11G013580Cucurbita pepo (Zucchini)cmocpeB114
CmoCh11G013580Bottle gourd (USVL1VR-Ls)cmolsiB089
CmoCh11G013580Bottle gourd (USVL1VR-Ls)cmolsiB116
CmoCh11G013580Bottle gourd (USVL1VR-Ls)cmolsiB140
CmoCh11G013580Cucumber (Gy14) v2cgybcmoB156
CmoCh11G013580Cucumber (Gy14) v2cgybcmoB270
CmoCh11G013580Melon (DHL92) v3.6.1cmomedB123
CmoCh11G013580Melon (DHL92) v3.6.1cmomedB146
CmoCh11G013580Silver-seed gourdcarcmoB0292
CmoCh11G013580Silver-seed gourdcarcmoB0508