CmoCh10G005120 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh10G005120
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	RTF2-like protein
Location	Cmo_Chr10 : 2314040 .. 2315197 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATCCGTTGAAGCAACACTGTTTTCAGTTCTTTGTTTGCTCTCCCGAGCTACAAATTCAATCCGAAATCGTAAACCTAGCACGAAATTCGGTCCAAACCCTTGAGGACCTTAAGTCTTCTCTTGTTCCCGAAACGATTGTGTCATCTTTCTACTTCACCCTGAATGGGAAACCCCTTCTTGATTCCACCACGATTCCCTGTTCTCTGATTCCCCCTCTGTCCACGTTAATTTTGAGAACCAGGGTCCTTGGGGGCGGTGGCGATGGCGGGGCAACAGGGGCCGAATCTCGTGATTGCTACCTTAATATGTACGCAGAAAAGAAGCCCGATAAGGTTGATCCTAACGAGCAGAGGCTGTCCAAGTGGTTGAATTGCGCTCTTTCTAATGAGCCTTTGAGGGAACCTTGTGTGATCGATTGGCTTGGGAATATTTTCAATAAGGAGTCGCTTGTGCAGGCTTTGCTAGAGAAGAAGCTACCAAAGGGATTTGGGCATATCAAGGGTCTGAAGGATATGATCAAGATTAATCTTTCGGTGATTCCCGGTACAGAATCGAGTCGCAATGCGATTTCAGGATCGCGGTTCCAATGCCCGATTACTGGCCTCGAGTTCAATGGCAAGTATAAGTTTTTTGCTCTGAGAACTTGTGGACATGTGCTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCCTCTTCCTGCCTTGTTTGTCATGCTGAGTTTTTGGACAGAGACAAGTTCGTGATCAATGGGAGTGAGGAGGAGGTAGCAGAAATGAGGGAGAGGATGGAGGAAGAGAAATCGAAATCGAAACCAAAGGAGAAGAAGACGAAGAAAGTGAGGAATGGGGAAGTGGGTATGGATGGAGATGCAACTGTGGAATTGGCAGCATCGTGTTTGTCTGGTAAAAAGCACGGTATTGAAGTTAAGGCTTTGGAGAAGGTTTCTGCTAAGCCCGACAGGCATAATAAGCGGCCGGATGGTGGAGTTCAGGTAAAGGTTGCAGCCAGTAATGGTGCTGTAAAGCGTTTCAAAGCAGCAGACATGGCCCCTGCCAATGCTACCAAAGAAGTCTACGCTTCGATATTCACTTCATCTAAGAAGTCAGATTTTAAGGAAACGTATAGTTGTAGATCTCTTCCACTCGGTCGAAACTGA

mRNA sequence

ATGCATCCGTTGAAGCAACACTGTTTTCAGTTCTTTGTTTGCTCTCCCGAGCTACAAATTCAATCCGAAATCGTAAACCTAGCACGAAATTCGGTCCAAACCCTTGAGGACCTTAAGTCTTCTCTTGTTCCCGAAACGATTGTGTCATCTTTCTACTTCACCCTGAATGGGAAACCCCTTCTTGATTCCACCACGATTCCCTGTTCTCTGATTCCCCCTCTGTCCACGTTAATTTTGAGAACCAGGGTCCTTGGGGGCGGTGGCGATGGCGGGGCAACAGGGGCCGAATCTCGTGATTGCTACCTTAATATGTACGCAGAAAAGAAGCCCGATAAGGTTGATCCTAACGAGCAGAGGCTGTCCAAGTGGTTGAATTGCGCTCTTTCTAATGAGCCTTTGAGGGAACCTTGTGTGATCGATTGGCTTGGGAATATTTTCAATAAGGAGTCGCTTGTGCAGGCTTTGCTAGAGAAGAAGCTACCAAAGGGATTTGGGCATATCAAGGGTCTGAAGGATATGATCAAGATTAATCTTTCGGTGATTCCCGGTACAGAATCGAGTCGCAATGCGATTTCAGGATCGCGGTTCCAATGCCCGATTACTGGCCTCGAGTTCAATGGCAAGTATAAGTTTTTTGCTCTGAGAACTTGTGGACATGTGCTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCCTCTTCCTGCCTTGTTTGTCATGCTGAGTTTTTGGACAGAGACAAGTTCGTGATCAATGGGAGTGAGGAGGAGGTAGCAGAAATGAGGGAGAGGATGGAGGAAGAGAAATCGAAATCGAAACCAAAGGAGAAGAAGACGAAGAAAGTGAGGAATGGGGAAGTGGGTATGGATGGAGATGCAACTGTGGAATTGGCAGCATCGTGTTTGTCTGGTAAAAAGCACGGTATTGAAGTTAAGGCTTTGGAGAAGGTTTCTGCTAAGCCCGACAGGCATAATAAGCGGCCGGATGGTGGAGTTCAGGTAAAGGTTGCAGCCAGTAATGGTGCTGTAAAGCGTTTCAAAGCAGCAGACATGGCCCCTGCCAATGCTACCAAAGAAGTCTACGCTTCGATATTCACTTCATCTAAGAAGTCAGATTTTAAGGAAACGTATAGTTGTAGATCTCTTCCACTCGGTCGAAACTGA

Coding sequence (CDS)

ATGCATCCGTTGAAGCAACACTGTTTTCAGTTCTTTGTTTGCTCTCCCGAGCTACAAATTCAATCCGAAATCGTAAACCTAGCACGAAATTCGGTCCAAACCCTTGAGGACCTTAAGTCTTCTCTTGTTCCCGAAACGATTGTGTCATCTTTCTACTTCACCCTGAATGGGAAACCCCTTCTTGATTCCACCACGATTCCCTGTTCTCTGATTCCCCCTCTGTCCACGTTAATTTTGAGAACCAGGGTCCTTGGGGGCGGTGGCGATGGCGGGGCAACAGGGGCCGAATCTCGTGATTGCTACCTTAATATGTACGCAGAAAAGAAGCCCGATAAGGTTGATCCTAACGAGCAGAGGCTGTCCAAGTGGTTGAATTGCGCTCTTTCTAATGAGCCTTTGAGGGAACCTTGTGTGATCGATTGGCTTGGGAATATTTTCAATAAGGAGTCGCTTGTGCAGGCTTTGCTAGAGAAGAAGCTACCAAAGGGATTTGGGCATATCAAGGGTCTGAAGGATATGATCAAGATTAATCTTTCGGTGATTCCCGGTACAGAATCGAGTCGCAATGCGATTTCAGGATCGCGGTTCCAATGCCCGATTACTGGCCTCGAGTTCAATGGCAAGTATAAGTTTTTTGCTCTGAGAACTTGTGGACATGTGCTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCCTCTTCCTGCCTTGTTTGTCATGCTGAGTTTTTGGACAGAGACAAGTTCGTGATCAATGGGAGTGAGGAGGAGGTAGCAGAAATGAGGGAGAGGATGGAGGAAGAGAAATCGAAATCGAAACCAAAGGAGAAGAAGACGAAGAAAGTGAGGAATGGGGAAGTGGGTATGGATGGAGATGCAACTGTGGAATTGGCAGCATCGTGTTTGTCTGGTAAAAAGCACGGTATTGAAGTTAAGGCTTTGGAGAAGGTTTCTGCTAAGCCCGACAGGCATAATAAGCGGCCGGATGGTGGAGTTCAGGTAAAGGTTGCAGCCAGTAATGGTGCTGTAAAGCGTTTCAAAGCAGCAGACATGGCCCCTGCCAATGCTACCAAAGAAGTCTACGCTTCGATATTCACTTCATCTAAGAAGTCAGATTTTAAGGAAACGTATAGTTGTAGATCTCTTCCACTCGGTCGAAACTGA

Homology

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BLAST of CmoCh10G005120 vs. Swiss-Prot
Match: RTF2_RAT (Protein RTF2 homolog OS=Rattus norvegicus GN=Rtfdc1 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.4e-31
Identity = 99/275 (36.00%), Postives = 148/275 (53.82%), Query Frame = 1


Query: 108 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVQALLEKKLPKGFG-- 167
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEVLRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 168 --HIKGLKDMIKINLSVIPGTESSRNAISG--------SRFQCPITGLEFNGKYKFFALR 227
             HI+ +K++ ++ LS  P  E  +    G        +RF CP+ GLE NG+++F  LR
Sbjct: 79  TSHIRSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 228 TCGHVLSAKALKEVKSSSCLVCHAEFLDRDKFVINGSEEEVAEMRERMEEEKSKSKPKEK 287
            CG V S +ALKE+K+  C  C A F + D  V+NG++E+V  ++ RMEE + ++K  EK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKRRMEERRLRAK-LEK 198

Query: 288 KTKKVRNGE----VGMDGDATVELAASCLSGKKHGIEVKALEKVSAKPDRHNKRPDGGVQ 347
           KTKK +  E    +G+  D+     A   +GK    +    EK S+   R     +G   
Sbjct: 199 KTKKPKTAESASKLGISQDSAGPSKAK--AGKSEEADPDPREKKSSLAPR-GTASNGSAS 258

Query: 348 VKVAASN-GAVKRFKAADMAPANATKEVYASIFTS 366
            KV     GA+KR   AD    +   E Y SIFTS
Sbjct: 259 GKVGKPPCGALKR-SIAD----SEESETYKSIFTS 284

[Close]

BLAST of CmoCh10G005120 vs. Swiss-Prot
Match: RTF2_MOUSE (Protein RTF2 homolog OS=Mus musculus GN=Rtfdc1 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.1e-31
Identity = 98/274 (35.77%), Postives = 145/274 (52.92%), Query Frame = 1


Query: 108 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVQALLEKKLPKGFG-- 167
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 168 --HIKGLKDMIKINLSVIPGTESSRNAISG--------SRFQCPITGLEFNGKYKFFALR 227
             HI+ +K++ ++ LS  P  E  +    G        +RF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIRSIKNVTELRLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 228 TCGHVLSAKALKEVKSSSCLVCHAEFLDRDKFVINGSEEEVAEMRERMEEEKSKSKPKEK 287
            CG V S +ALKE+K+  C  C A F + D  V+NG++E+V  +++RMEE + ++K  EK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKKRMEERRLRAK-LEK 198

Query: 288 KTKKVRNGEVGMDGDATVELAA---SCLSGKKHGIEVKALEKVSAKPDRHNKRPDGGVQV 347
           KTKK +          T + +A      SGK    +    EK S  P       +G    
Sbjct: 199 KTKKPKTATECASKPGTTQDSAGPSKVKSGKPEEADPDPREKKST-PAPRGAATNGSASG 258

Query: 348 KVAASN-GAVKRFKAADMAPANATKEVYASIFTS 366
           KV     GA+KR   AD    +   E Y SIFTS
Sbjct: 259 KVGKPPCGALKR-SIAD----SEESETYKSIFTS 285

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BLAST of CmoCh10G005120 vs. Swiss-Prot
Match: RTF2_PIG (Protein RTF2 homolog OS=Sus scrofa GN=RTFDC1 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.4e-30
Identity = 94/282 (33.33%), Postives = 146/282 (51.77%), Query Frame = 1


Query: 108 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVQALLEKKLPKGFG-- 167
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSSEKALGKA 78

Query: 168 --HIKGLKDMIKINLSVIPGTESSRNAISG--------SRFQCPITGLEFNGKYKFFALR 227
             HIK +K++ ++ LS  P  E  + +  G        +RF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELRLSDNPAWEGDKGSTKGDKHDDLQRARFICPVVGLEMNGRHRFCYLR 138

Query: 228 TCGHVLSAKALKEVKSSSCLVCHAEFLDRDKFVINGSEEEVAEMRERMEEEKSKSKPKEK 287
            CG V S +ALKE+K+  C  C A F + D  V+NG++E+VA ++ RMEE + ++K   K
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVAMLQTRMEERRLRAK-LGK 198

Query: 288 KTKKVRNGEVGMDGDATVELAASCLSGKKHGIEVKALEKVSAKPDRHNKRPDGGVQVKVA 347
           KTKK +  E     D + E             ++KA +      D   K+     +   A
Sbjct: 199 KTKKPKAAESVSKSDISEEAPGPS--------KMKAGKPEETSLDSREKKTSSAPRSAAA 258

Query: 348 ASNGAVKRFKAADMAPA-----NATKEVYASIFT---SSKKS 370
             + + K  K    AP      +   E Y S+FT   S+K+S
Sbjct: 259 HGSSSGKAGKPVCGAPKRSIADSGESEAYKSLFTTHSSAKRS 291

[Close]

BLAST of CmoCh10G005120 vs. Swiss-Prot
Match: RTF2_PONAB (Protein RTF2 homolog OS=Pongo abelii GN=RTFDC1 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.7e-29
Identity = 92/276 (33.33%), Postives = 146/276 (52.90%), Query Frame = 1


Query: 108 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVQALLEKKLPKGFG-- 167
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 168 --HIKGLKDMIKINLSVIPGTESSRNAISG--------SRFQCPITGLEFNGKYKFFALR 227
             HIK +K++ ++ LS  P  E  +    G        +RF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 228 TCGHVLSAKALKEVKSSSCLVCHAEFLDRDKFVINGSEEEVAEMRERMEEEKSKSKPKEK 287
            CG V S +ALKE+K+  C  C A F + D  V+NG++E+V  ++ RMEE + ++K  EK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVDVLKTRMEERRLRAK-LEK 198

Query: 288 KTKKVRNGEVGMDGDATVEL--AASCLSGKKHGIEVKALEKVSAKPDRHNKRPDGGVQVK 347
           KTKK +  E     D + E    +   +GK     + + EK +    +     +      
Sbjct: 199 KTKKPKAAESVSKPDVSEEAPGPSKVKTGKPEEASLDSREKKTNLAPKSTATNESSSGKA 258

Query: 348 VAASNGAVKRFKAADMAPANATKEVYASIFTSSKKS 370
                GA KR   AD   + A K ++ +  +S+K+S
Sbjct: 259 GKPPCGATKR-SIADSEESEAYKSLFTT-HSSAKRS 291

[Close]

BLAST of CmoCh10G005120 vs. Swiss-Prot
Match: RTF2_MACFA (Protein RTF2 homolog OS=Macaca fascicularis GN=RTFDC1 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.9e-29
Identity = 98/288 (34.03%), Postives = 151/288 (52.43%), Query Frame = 1


Query: 108 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVQALLEKKLPKGFG-- 167
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 168 --HIKGLKDMIKINLSVIPGTESSRNAISG--------SRFQCPITGLEFNGKYKFFALR 227
             HIK +K++ ++ LS  P  E  +    G        +RF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 228 TCGHVLSAKALKEVKSSSCLVCHAEFLDRDKFVINGSEEEVAEMRERMEEEKSKSKPKEK 287
            CG V S +ALKE+K+  C  C A F + D  V+NG+ E+V  ++ RMEE + ++K  EK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTNEDVDVLKARMEERRLRAK-LEK 198

Query: 288 KTKKVRNGEVGMDGDATVEL--AASCLSGKKHGIEVKALEKVSAKPDRHNKRPDGGVQVK 347
           KTKK +  E     D + E    +   +GK     + + EK      ++N  P      K
Sbjct: 199 KTKKPKAAESVSKPDVSEEAPGPSKVKTGKPEETSLDSREK------KNNLAP------K 258

Query: 348 VAASN------------GAVKRFKAADMAPANATKEVYASIFTSSKKS 370
            AA+N            GA KR   AD   + A K ++ +  +S+K+S
Sbjct: 259 SAATNESFSGKAGKPLCGATKR-SIADSEESEAYKSLFTT-HSSAKRS 291

[Close]

BLAST of CmoCh10G005120 vs. TrEMBL
Match: A0A0A0LTI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G269330 PE=4 SV=1)

HSP 1 Score: 636.7 bits (1641), Expect = 1.8e-179
Identity = 332/389 (85.35%), Postives = 351/389 (90.23%), Query Frame = 1


Query: 1   MHPLKQHCFQFFVCSPELQIQSEIVNLARNSVQTLEDLKSSLVPET----IVSSFYFTLN 60
           MHP  QH FQ F+ SP+LQI+S+IVNL +   +TLEDLK SL+ E     I SSFYFTLN
Sbjct: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60

Query: 61  GKPLLDSTTIPCSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLLDSTTI  SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGN+FNKESLVQALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSVIPGTESSRNAISGSRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N S+IPGTES  NAIS  R+QCP+TGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NFSMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFLDRDKFVINGSEEEVAEMRERMEEEKSKSKPKEKKTKKVRNGEVGMDGDATVELA 300
           CHAEF +RDKFVINGSEEEV EMRERMEEEKSKSK KEKKTKKVRNGEVGM+GD +V+LA
Sbjct: 241 CHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLA 300

Query: 301 ASCLSGKKHGIEVKALEKVSAKPDRHNKRPDGGVQVKVAASNGAVKRFKAADMAPANATK 360
            S LSGKKH IEVK+LEKVSAKP+R  +R DGG QVK A SNGAVKRFKAADM PANATK
Sbjct: 301 ISRLSGKKHAIEVKSLEKVSAKPER-QERLDGGAQVKDATSNGAVKRFKAADMVPANATK 360

Query: 361 EVYASIFTSSKKSDFKETYSCRSLPLGRN 386
           EVYASIFTSS+KSDFKETYSCRSLPLGRN
Sbjct: 361 EVYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CmoCh10G005120 vs. TrEMBL
Match: M5VW12_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007127mg PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 1.0e-137
Identity = 262/386 (67.88%), Postives = 307/386 (79.53%), Query Frame = 1


Query: 1   MHPLKQHCFQFFVCSPELQIQSEIVNLARNSVQTLEDLKSSLVPETIVSSFYFTLNGKPL 60
           MHP K H FQ F+ SP+LQI ++ + LA     TL  LK S+   T+  S YFTLNGKPL
Sbjct: 1   MHP-KLHNFQIFLQSPDLQIPTQTITLAPTQTPTLRHLKLSIFSHTL-PSLYFTLNGKPL 60

Query: 61  LDSTTIPCSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRL 120
            DST +  S I PLSTL+LR R  GGGGDGGATGAESRDCYL MYAEKKPDKVDPNEQRL
Sbjct: 61  NDSTPLLDSQITPLSTLVLRIRACGGGGDGGATGAESRDCYLKMYAEKKPDKVDPNEQRL 120

Query: 121 SKWLNCALSNEPLREPCVIDWLGNIFNKESLVQALLEKKLPKGFGHIKGLKDMIKINLSV 180
           SKWLNC+LSNEPL+EPCV+D+LGN+FNKE LV+ALL KK+PK FGHIKGLKDMI ++ S 
Sbjct: 121 SKWLNCSLSNEPLKEPCVVDFLGNVFNKEPLVEALLGKKVPKAFGHIKGLKDMITVHFSP 180

Query: 181 IPGTESSR-NAISGSRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHA 240
           IPGTES+R ++ +G RFQCPI+G+EFNGK KF AL+TCGHVLSAKALKEVKSS+CLVCHA
Sbjct: 181 IPGTESNRRSSAAGPRFQCPISGVEFNGKCKFLALKTCGHVLSAKALKEVKSSTCLVCHA 240

Query: 241 EFLDRDKFVINGSEEEVAEMRERMEEEKSKSKPKEKKTKKVRNGEVGMDGDATVELAASC 300
            F + DK VING+EEEVA +R+RME EK+K + K  K KK +NG+  ++G+  +   AS 
Sbjct: 241 GFSEADKIVINGNEEEVAALRDRMEAEKAKGRVK--KMKKTKNGDATLNGEEGMGFEASR 300

Query: 301 LSGKKHGIEVKALEKVSAKPDRHNKRPDGGVQVKVAASNGAVKRFKAADMAPANATKEVY 360
           LSG KHGI+VKA+EK SA  + H K  +GG  VK   SNGA KRFKA D+AP NATKEVY
Sbjct: 301 LSGTKHGIDVKAVEKASANVEVHGKVVNGGDNVK-GVSNGAAKRFKAVDIAPPNATKEVY 360

Query: 361 ASIFTSSKKSDFKETYSCRSLPLGRN 386
           ASIFTSS+KS+FKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSEFKETYSCRSLPLGRN 381

[Close]

BLAST of CmoCh10G005120 vs. TrEMBL
Match: W9QY07_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003302 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 3.1e-131
Identity = 258/384 (67.19%), Postives = 292/384 (76.04%), Query Frame = 1


Query: 10  QFFVCSPELQIQSEIVNLARNSVQTLEDLKSSLVPETIVSSFYFTLNGKPLLDSTTIPCS 69
           Q FV SP+LQ  ++ + L     QTL  LK  L P  I+SS YFTLNGK L D ++I  S
Sbjct: 9   QIFVESPDLQTPTKTLTLTPTKSQTLRSLKLFLFPSEILSSCYFTLNGKRLDDDSSILSS 68

Query: 70  LIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKWLNCALS 129
            I PLSTLILR+R  GGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKWLNCALS
Sbjct: 69  QIAPLSTLILRSRARGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKWLNCALS 128

Query: 130 NEPLREPCVIDWLGNIFNKESLVQALLEKKLPKGFGHIKGLKDMIKINLSVIPGTESSRN 189
           NEPL+EPCV+DWLGN+FNKE+LVQALL K +PK FGH+KGLKDMIKI LSVIPG E   +
Sbjct: 129 NEPLKEPCVVDWLGNVFNKEALVQALLGKNIPKAFGHVKGLKDMIKIQLSVIPGVEEDGD 188

Query: 190 AISG--SRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHAEFLDRDKF 249
             SG  +RFQCPITGLEFNGKYKFF+LR CGHVLSAKALKEVK+SSCLVCH EF + DK 
Sbjct: 189 RDSGARARFQCPITGLEFNGKYKFFSLRKCGHVLSAKALKEVKTSSCLVCHVEFSESDKI 248

Query: 250 VINGSEEEVAEMRERMEEEKSKSKPKEKKTKKVRNGEVGMDGDATVELAASCLSGKKHGI 309
           VINGS+EEV  +RERME EK K   KEKK KKV+NG  G+D D      ++ LSG KHGI
Sbjct: 249 VINGSDEEVMVLRERMEMEKGKL--KEKKGKKVKNGGDGLDSD------SARLSGTKHGI 308

Query: 310 ------EVKALEKVSAKPDRHNKRPDGGVQVKVAASNGAVKRFKAADMAPANATKEVYAS 369
                 + KAL KV A         +  +  K +++  A KRFKA D+APANA KEVYAS
Sbjct: 309 GDGVKADWKALSKVEADGKVGKAASNVRIPFKSSSNGNAAKRFKATDIAPANANKEVYAS 368

Query: 370 IFTSSKKSDFKETYSCRSLPLGRN 386
           IFTSSKKSDFKET++CRSLPLGRN
Sbjct: 369 IFTSSKKSDFKETFTCRSLPLGRN 384

[Close]

BLAST of CmoCh10G005120 vs. TrEMBL
Match: F6HYI7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00090 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 5.3e-131
Identity = 258/386 (66.84%), Postives = 302/386 (78.24%), Query Frame = 1


Query: 1   MHPLKQHCFQFFVCSPELQIQSEIVNLARNSVQTLEDLKSSLVPETIVSSFYFTLNGKPL 60
           MH  KQ   Q  + SP+L I +  + L  NS  TL +LK SL+P   + SF+FTL+GK L
Sbjct: 1   MHTPKQSQIQILIQSPDLPIATRALTLNPNS--TLRNLKLSLLPPQTLDSFFFTLHGKAL 60

Query: 61  LDSTTIPCSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRL 120
            DS+T+  S I PLSTL+LR R+ GGGGDGGATGAESRDCYLNMYA KKPDKVDPNEQRL
Sbjct: 61  HDSSTLQKSGINPLSTLVLRFRLPGGGGDGGATGAESRDCYLNMYAVKKPDKVDPNEQRL 120

Query: 121 SKWLNCALSNEPLREPCVIDWLGNIFNKESLVQALLEKKLPKGFGHIKGLKDMIKINLSV 180
           SKW  C+LS EPLR PCV+D LGN+FNKE+LV+ LL KKLPK FGHI+GLKDM+ I LSV
Sbjct: 121 SKWTTCSLSFEPLRHPCVVDRLGNVFNKEALVEGLLGKKLPKAFGHIRGLKDMVPIELSV 180

Query: 181 IPGTESSRNAIS-GSRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHA 240
           IPG ES    +S G+R+QCPITGLEFNGKY+FFAL+TCGHVLSAKALKEVKSS+CLVCH 
Sbjct: 181 IPGLESDNGGVSAGARYQCPITGLEFNGKYRFFALKTCGHVLSAKALKEVKSSACLVCHE 240

Query: 241 EFLDRDKFVINGSEEEVAEMRERMEEEKSKSKPKEKKTKKVRNGEVGMDGDATVELAASC 300
            F + DK  INGSEEEVA +RERMEEE++K   +EKK KKV+NGEVG++GD  V L  S 
Sbjct: 241 GFKEEDKIPINGSEEEVAALRERMEEERAKL--REKKAKKVKNGEVGVNGDEDVYL-DSR 300

Query: 301 LSGKKHGIEVKALEKVSAKPDRHNKRPDGGVQVKVAASNGAVKRFKAADMAPANATKEVY 360
           LSGKKHGI+ KA+ +V AK +++ K  +GGV VK   S   VKR KAA + P NATKEVY
Sbjct: 301 LSGKKHGIDAKAVGRVDAKMEKNGKAVNGGVVVKGEIS--GVKRLKAAQV-PPNATKEVY 360

Query: 361 ASIFTSSKKSDFKETYSCRSLPLGRN 386
           ASIFTSS+KS+FKETY CRSLPLGRN
Sbjct: 361 ASIFTSSRKSEFKETYMCRSLPLGRN 378

[Close]

BLAST of CmoCh10G005120 vs. TrEMBL
Match: K7K9Q4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G202400 PE=4 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 5.0e-129
Identity = 254/376 (67.55%), Postives = 294/376 (78.19%), Query Frame = 1


Query: 10  QFFVCSPELQIQSEIVNLARNSVQTLEDLKSSLVPETIVSSFYFTLNGKPLLDSTTIPCS 69
           Q  V SP+L I  +    +  + +TL DLK+SL P++   SFYFT NGKPL D T  P S
Sbjct: 7   QILVHSPDLGISLQ----STTNHETLSDLKNSLFPQSH-QSFYFTFNGKPLPDKT--PLS 66

Query: 70  LIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKWLNCALS 129
             PPLSTL LR+R+LGGGGDGGATGAESRDCYLNMYA+KKPDKVDPNEQRLSKW NCALS
Sbjct: 67  QFPPLSTLSLRSRLLGGGGDGGATGAESRDCYLNMYADKKPDKVDPNEQRLSKWHNCALS 126

Query: 130 NEPLREPCVIDWLGNIFNKESLVQALLEKKLPKGFGHIKGLKDMIKINLSVIPGTESSRN 189
           NEPLREPCVID LGNIFNKE+LV+ALL KKLPK FGHIKGLKDMI + LS IPG +    
Sbjct: 127 NEPLREPCVIDKLGNIFNKEALVEALLGKKLPKEFGHIKGLKDMINVQLSAIPGAD---- 186

Query: 190 AISGSRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHAEFLDRDKFVI 249
              G++FQCP+ GLEFNGKY+FFALR CGHVLSAKAL+EVKSSSCLVCH E+ D DK V+
Sbjct: 187 --DGAKFQCPVAGLEFNGKYRFFALRNCGHVLSAKALREVKSSSCLVCHKEYADVDKVVL 246

Query: 250 NGSEEEVAEMRERMEEEKSKSKPKEKKTKKVRNGEVGMDGDATVELAASCLSGKKHGIEV 309
           NGS+EEVA +RERMEEEK+K   +EKK+KKV+N       D  V L  + LSG KHG++ 
Sbjct: 247 NGSDEEVAVLRERMEEEKAKI--REKKSKKVKNN----GNDDGVSLEGTRLSGTKHGVDG 306

Query: 310 KALEKVSAKPDRHNKRPDGGVQVKVAASNGAVKRFKAADMAPANATKEVYASIFTSSKKS 369
           K +EK SAK +R+ K  +G V V   A+  A KRFKA D+APANATK+VYASIFTSS+KS
Sbjct: 307 KGVEKASAKVERNGKVGNGNVGVNGGAA-AAAKRFKAVDLAPANATKDVYASIFTSSRKS 362

Query: 370 DFKETYSCRSLPLGRN 386
           +FKETYSCRSLPLGRN
Sbjct: 367 EFKETYSCRSLPLGRN 362

[Close]

BLAST of CmoCh10G005120 vs. TAIR10
Match: AT5G58020.1 (AT5G58020.1 unknown protein)

HSP 1 Score: 385.6 bits (989), Expect = 3.7e-107
Identity = 226/383 (59.01%), Postives = 266/383 (69.45%), Query Frame = 1


Query: 10  QFFVCSPELQIQSEIVNLARNSVQTLEDLK--SSLVPETIVSSFY---FTLNGKPLLDST 69
           Q FV SP+ Q   ++V L  +  Q+L  L   +SL+  +   SF     TL+GK L  ST
Sbjct: 6   QIFVKSPDCQ---KVVALQLDPAQSLLTLSGITSLLESSQRISFSACSITLDGKLLNGST 65

Query: 70  TIPCSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKWL 129
            I  S +P +S L L  R+ GGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKWL
Sbjct: 66  RIQVSKLPSVSMLTLFPRLRGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKWL 125

Query: 130 NCALSNEPLREPCVIDWLGNIFNKESLVQALLEKKLPKGFGHIKGLKDMIKINLSVIPGT 189
           NCALSNEPL EPCVID LGN+FNKE LV ALL K+LPK F +IKGLKDM+ I L+ + G+
Sbjct: 126 NCALSNEPLAEPCVIDLLGNLFNKEVLVHALLSKRLPKQFSYIKGLKDMVNIKLTPVAGS 185

Query: 190 ESSRNAISGSRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHAEFLDR 249
           + S    + ++FQCP++GLEFNGKYKFFALR CGHV+SAKALKEVKSSSCLVCHA+  D 
Sbjct: 186 DGSSQDTTSAQFQCPVSGLEFNGKYKFFALRGCGHVMSAKALKEVKSSSCLVCHADVKDS 245

Query: 250 DKFVINGSEEEVAEMRERMEEEKSKSKPKEKKTKKVRNGEVGMDGDATVELAASCLSGKK 309
           DK VING+EEEV  +RERMEEEK+K + K+  +KK +NG   +  D   ++A       K
Sbjct: 246 DKIVINGTEEEVDLLRERMEEEKAKLREKKGVSKKSKNG-AAVVADTGAKVA-------K 305

Query: 310 HGIEVKALEKVSAKPDRHNKRPDGGVQVKVAASNG-AVKRFKAADMAPANATKEVYASIF 369
             IE                  DG V       NG  VK+FKAAD  P NATKEVYAS+F
Sbjct: 306 RQIE------------------DGNVN-----GNGITVKKFKAADKVPVNATKEVYASLF 354

Query: 370 TSS-KKSDFKETYSCRSLPLGRN 386
           TSS KKSDF+ETYSCRSLPLGRN
Sbjct: 366 TSSKKKSDFRETYSCRSLPLGRN 354

[Close]

BLAST of CmoCh10G005120 vs. NCBI nr
Match: gi|659086633|ref|XP_008444038.1| (PREDICTED: protein RTF2 homolog [Cucumis melo])

HSP 1 Score: 640.6 bits (1651), Expect = 1.8e-180
Identity = 333/389 (85.60%), Postives = 352/389 (90.49%), Query Frame = 1


Query: 1   MHPLKQHCFQFFVCSPELQIQSEIVNLARNSVQTLEDLKSSLVPET----IVSSFYFTLN 60
           MHP  QH  Q F+ SP+LQIQS+IV+L + S +TLEDLK SL+ ET    + SS YFTLN
Sbjct: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60

Query: 61  GKPLLDSTTIPCSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLLDSTTI  SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPL EPCVIDWLGN+FNKESLVQALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSVIPGTESSRNAISGSRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N S+IPGTES  NAIS  RFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NFSMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFLDRDKFVINGSEEEVAEMRERMEEEKSKSKPKEKKTKKVRNGEVGMDGDATVELA 300
           CH EF +RDKFVINGSEEEV EMRERMEEEKSKSK KEKKTKKVRNGEVGM+GD T++LA
Sbjct: 241 CHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLA 300

Query: 301 ASCLSGKKHGIEVKALEKVSAKPDRHNKRPDGGVQVKVAASNGAVKRFKAADMAPANATK 360
            S LSGKKHGIE++ LEKVSAKP+RH +R DGG QVKVAASNGAVKRFKAADM PANATK
Sbjct: 301 TSRLSGKKHGIELQTLEKVSAKPERH-ERLDGGAQVKVAASNGAVKRFKAADMVPANATK 360

Query: 361 EVYASIFTSSKKSDFKETYSCRSLPLGRN 386
           EVYASIFTSS+KSDFKETYSCRSLPLGRN
Sbjct: 361 EVYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CmoCh10G005120 vs. NCBI nr
Match: gi|778660265|ref|XP_011655923.1| (PREDICTED: protein RTF2 homolog [Cucumis sativus])

HSP 1 Score: 636.7 bits (1641), Expect = 2.6e-179
Identity = 332/389 (85.35%), Postives = 351/389 (90.23%), Query Frame = 1


Query: 1   MHPLKQHCFQFFVCSPELQIQSEIVNLARNSVQTLEDLKSSLVPET----IVSSFYFTLN 60
           MHP  QH FQ F+ SP+LQI+S+IVNL +   +TLEDLK SL+ E     I SSFYFTLN
Sbjct: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60

Query: 61  GKPLLDSTTIPCSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLLDSTTI  SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGN+FNKESLVQALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSVIPGTESSRNAISGSRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N S+IPGTES  NAIS  R+QCP+TGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NFSMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFLDRDKFVINGSEEEVAEMRERMEEEKSKSKPKEKKTKKVRNGEVGMDGDATVELA 300
           CHAEF +RDKFVINGSEEEV EMRERMEEEKSKSK KEKKTKKVRNGEVGM+GD +V+LA
Sbjct: 241 CHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLA 300

Query: 301 ASCLSGKKHGIEVKALEKVSAKPDRHNKRPDGGVQVKVAASNGAVKRFKAADMAPANATK 360
            S LSGKKH IEVK+LEKVSAKP+R  +R DGG QVK A SNGAVKRFKAADM PANATK
Sbjct: 301 ISRLSGKKHAIEVKSLEKVSAKPER-QERLDGGAQVKDATSNGAVKRFKAADMVPANATK 360

Query: 361 EVYASIFTSSKKSDFKETYSCRSLPLGRN 386
           EVYASIFTSS+KSDFKETYSCRSLPLGRN
Sbjct: 361 EVYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CmoCh10G005120 vs. NCBI nr
Match: gi|1021473603|ref|XP_016200126.1| (PREDICTED: protein RTF2 homolog [Arachis ipaensis])

HSP 1 Score: 500.4 bits (1287), Expect = 2.9e-138
Identity = 279/392 (71.17%), Postives = 317/392 (80.87%), Query Frame = 1


Query: 1   MHPLKQHCFQFFVCSPELQIQSEIVNLA----RNSVQTLEDLKSSLVPETIVSSF-YFTL 60
           MHP K H  QFFV SPELQI S+ V ++     N + +L  LK SL+P++  SSF YFTL
Sbjct: 1   MHP-KSH--QFFVQSPELQISSQSVTVSSATTHNEIHSLSHLKRSLLPKSQYSSFFYFTL 60

Query: 61  NGKPLLDSTTIPCSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDP 120
           NGK L D T +  S IPP S L+LR+R+LGGGGDGGATGAESRDCYLNMYA KKPDKVDP
Sbjct: 61  NGKTLPDETLLSSSQIPPFSHLLLRSRLLGGGGDGGATGAESRDCYLNMYAVKKPDKVDP 120

Query: 121 NEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVQALLEKKLPKGFGHIKGLKDMIK 180
           NEQRLSKWLNCALSNEPL EPCVID LGNIFNKESLV+AL+ KKLPK FGHIKGLKDMIK
Sbjct: 121 NEQRLSKWLNCALSNEPLTEPCVIDKLGNIFNKESLVEALIGKKLPKEFGHIKGLKDMIK 180

Query: 181 INLSVIPGTESSRNAISGSRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCL 240
           ++LS+IPG     N  SG+RFQCPI GLEFNGKYKFFALR CGHVLSAKALKEVKSSSCL
Sbjct: 181 VHLSLIPGV---GNMGSGARFQCPIAGLEFNGKYKFFALRNCGHVLSAKALKEVKSSSCL 240

Query: 241 VCHAEFLDRDKFVINGSEEEVAEMRERMEEEKSKSKPKEKKTKKVRNGEVGMDGDATVEL 300
           VCH+EF + DK  INGSEEEVA +RE+MEEEK+K+  KEKK+KKV+NG  G++GD   +L
Sbjct: 241 VCHSEFREGDKIPINGSEEEVAVLREKMEEEKAKT-TKEKKSKKVKNGG-GVNGD---DL 300

Query: 301 AASCLSGKKHGIEVKALEKVSAKPDRHNKRPDGGVQVKVA--ASNGAVKRFKAADMAPAN 360
             S LSG KHGI+VKA+EK SAK + +N   +G V +K    AS  A KRFKA+D+APAN
Sbjct: 301 EGSRLSGTKHGIDVKAVEKASAKVEANN---NGKVSLKGVNDASAAAAKRFKASDLAPAN 360

Query: 361 ATKEVYASIFTSSKKSDFKETYSCRSLPLGRN 386
           ATKEVYASIFTSS+KSDFKETYSCRSLPLGRN
Sbjct: 361 ATKEVYASIFTSSRKSDFKETYSCRSLPLGRN 378

[Close]

BLAST of CmoCh10G005120 vs. NCBI nr
Match: gi|1012001716|ref|XP_015932787.1| (PREDICTED: protein RTF2 homolog [Arachis duranensis])

HSP 1 Score: 499.6 bits (1285), Expect = 4.9e-138
Identity = 278/392 (70.92%), Postives = 316/392 (80.61%), Query Frame = 1


Query: 1   MHPLKQHCFQFFVCSPELQIQSEIVNLA----RNSVQTLEDLKSSLVPETIVSSF-YFTL 60
           MHP K H  QFFV  PELQI S+ V ++     N + +L  LK SL+P++  SSF YFTL
Sbjct: 1   MHP-KSH--QFFVQLPELQIPSQSVTVSSAATHNEIHSLSHLKRSLLPKSQYSSFFYFTL 60

Query: 61  NGKPLLDSTTIPCSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDP 120
           NGK L D T +  S IPP S L+LR+R+LGGGGDGGATGAESRDCYLNMYA KKPDKVDP
Sbjct: 61  NGKTLPDETLLSSSQIPPFSNLLLRSRLLGGGGDGGATGAESRDCYLNMYAVKKPDKVDP 120

Query: 121 NEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVQALLEKKLPKGFGHIKGLKDMIK 180
           NEQRLSKWLNCALSNEPL EPCVID LGNIFNKESLV+AL+ KKLPK FGHIKGLKDMIK
Sbjct: 121 NEQRLSKWLNCALSNEPLTEPCVIDKLGNIFNKESLVEALIGKKLPKEFGHIKGLKDMIK 180

Query: 181 INLSVIPGTESSRNAISGSRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCL 240
           ++LSVIPG     N  SG+RFQCP+ GLEFNGKYKFFALR CGHVLSAKALKEVKSS+CL
Sbjct: 181 VHLSVIPGV---GNMGSGARFQCPVAGLEFNGKYKFFALRNCGHVLSAKALKEVKSSTCL 240

Query: 241 VCHAEFLDRDKFVINGSEEEVAEMRERMEEEKSKSKPKEKKTKKVRNGEVGMDGDATVEL 300
           VCH+EF + DK  INGSEEEVA +RE+MEEEK+K+  KEKKTKKV+NG  G++GD   +L
Sbjct: 241 VCHSEFREGDKIPINGSEEEVAVLREKMEEEKAKT-TKEKKTKKVKNGG-GVNGD---DL 300

Query: 301 AASCLSGKKHGIEVKALEKVSAKPDRHNKRPDGGVQVKVA--ASNGAVKRFKAADMAPAN 360
             S LSG KHGI+VKA+EK SAK + +N   +G V +K    AS  A KRFKA+D+APAN
Sbjct: 301 EGSRLSGTKHGIDVKAVEKASAKVEANN---NGKVSLKGVNDASAAAAKRFKASDLAPAN 360

Query: 361 ATKEVYASIFTSSKKSDFKETYSCRSLPLGRN 386
           ATKEVYASIFTSSKKSDFKETY+CRSLPLGRN
Sbjct: 361 ATKEVYASIFTSSKKSDFKETYTCRSLPLGRN 378

[Close]

BLAST of CmoCh10G005120 vs. NCBI nr
Match: gi|595818692|ref|XP_007204400.1| (hypothetical protein PRUPE_ppa007127mg [Prunus persica])

HSP 1 Score: 498.0 bits (1281), Expect = 1.4e-137
Identity = 262/386 (67.88%), Postives = 307/386 (79.53%), Query Frame = 1


Query: 1   MHPLKQHCFQFFVCSPELQIQSEIVNLARNSVQTLEDLKSSLVPETIVSSFYFTLNGKPL 60
           MHP K H FQ F+ SP+LQI ++ + LA     TL  LK S+   T+  S YFTLNGKPL
Sbjct: 1   MHP-KLHNFQIFLQSPDLQIPTQTITLAPTQTPTLRHLKLSIFSHTL-PSLYFTLNGKPL 60

Query: 61  LDSTTIPCSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRL 120
            DST +  S I PLSTL+LR R  GGGGDGGATGAESRDCYL MYAEKKPDKVDPNEQRL
Sbjct: 61  NDSTPLLDSQITPLSTLVLRIRACGGGGDGGATGAESRDCYLKMYAEKKPDKVDPNEQRL 120

Query: 121 SKWLNCALSNEPLREPCVIDWLGNIFNKESLVQALLEKKLPKGFGHIKGLKDMIKINLSV 180
           SKWLNC+LSNEPL+EPCV+D+LGN+FNKE LV+ALL KK+PK FGHIKGLKDMI ++ S 
Sbjct: 121 SKWLNCSLSNEPLKEPCVVDFLGNVFNKEPLVEALLGKKVPKAFGHIKGLKDMITVHFSP 180

Query: 181 IPGTESSR-NAISGSRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHA 240
           IPGTES+R ++ +G RFQCPI+G+EFNGK KF AL+TCGHVLSAKALKEVKSS+CLVCHA
Sbjct: 181 IPGTESNRRSSAAGPRFQCPISGVEFNGKCKFLALKTCGHVLSAKALKEVKSSTCLVCHA 240

Query: 241 EFLDRDKFVINGSEEEVAEMRERMEEEKSKSKPKEKKTKKVRNGEVGMDGDATVELAASC 300
            F + DK VING+EEEVA +R+RME EK+K + K  K KK +NG+  ++G+  +   AS 
Sbjct: 241 GFSEADKIVINGNEEEVAALRDRMEAEKAKGRVK--KMKKTKNGDATLNGEEGMGFEASR 300

Query: 301 LSGKKHGIEVKALEKVSAKPDRHNKRPDGGVQVKVAASNGAVKRFKAADMAPANATKEVY 360
           LSG KHGI+VKA+EK SA  + H K  +GG  VK   SNGA KRFKA D+AP NATKEVY
Sbjct: 301 LSGTKHGIDVKAVEKASANVEVHGKVVNGGDNVK-GVSNGAAKRFKAVDIAPPNATKEVY 360

Query: 361 ASIFTSSKKSDFKETYSCRSLPLGRN 386
           ASIFTSS+KS+FKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSEFKETYSCRSLPLGRN 381

The following BLAST results are available for this feature:

BLAST of CmoCh10G005120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RTF2_RAT	2.4e-31	36.00	Protein RTF2 homolog OS=Rattus norvegicus GN=Rtfdc1 PE=2 SV=1	[more]
RTF2_MOUSE	3.1e-31	35.77	Protein RTF2 homolog OS=Mus musculus GN=Rtfdc1 PE=1 SV=1	[more]
RTF2_PIG	4.4e-30	33.33	Protein RTF2 homolog OS=Sus scrofa GN=RTFDC1 PE=3 SV=1	[more]
RTF2_PONAB	1.7e-29	33.33	Protein RTF2 homolog OS=Pongo abelii GN=RTFDC1 PE=2 SV=1	[more]
RTF2_MACFA	2.9e-29	34.03	Protein RTF2 homolog OS=Macaca fascicularis GN=RTFDC1 PE=2 SV=1	[more]

BLAST of CmoCh10G005120 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTI5_CUCSA	1.8e-179	85.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G269330 PE=4 SV=1	[more]
M5VW12_PRUPE	1.0e-137	67.88	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007127mg PE=4 SV=1	[more]
W9QY07_9ROSA	3.1e-131	67.19	Uncharacterized protein OS=Morus notabilis GN=L484_003302 PE=4 SV=1	[more]
F6HYI7_VITVI	5.3e-131	66.84	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00090 PE=4 SV=...	[more]
K7K9Q4_SOYBN	5.0e-129	67.55	Uncharacterized protein OS=Glycine max GN=GLYMA_02G202400 PE=4 SV=1	[more]

BLAST of CmoCh10G005120 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58020.1	3.7e-107	59.01	unknown protein	[more]

BLAST of CmoCh10G005120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659086633\|ref\|XP_008444038.1\|	1.8e-180	85.60	PREDICTED: protein RTF2 homolog [Cucumis melo]	[more]
gi\|778660265\|ref\|XP_011655923.1\|	2.6e-179	85.35	PREDICTED: protein RTF2 homolog [Cucumis sativus]	[more]
gi\|1021473603\|ref\|XP_016200126.1\|	2.9e-138	71.17	PREDICTED: protein RTF2 homolog [Arachis ipaensis]	[more]
gi\|1012001716\|ref\|XP_015932787.1\|	4.9e-138	70.92	PREDICTED: protein RTF2 homolog [Arachis duranensis]	[more]
gi\|595818692\|ref\|XP_007204400.1\|	1.4e-137	67.88	hypothetical protein PRUPE_ppa007127mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006735	Rtf2
IPR027799	Rtf2_RING-finger

Vocabulary: **Biological Process**
Term	Definition
GO:1902979	mitotic DNA replication termination

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902979	mitotic DNA replication termination
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G005120.1	CmoCh10G005120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006735	Replication termination factor 2	PANTHER	PTHR12775	PROTEIN C20ORF43 HOMOLOG	coord: 87..385 score: 8.6E
IPR027799	Replication termination factor 2, RING-finger	PFAM	PF04641	Rtf2	coord: 86..369 score: 6.3
None	No IPR available	unknown	Coil	Coil	coord: 249..269 scor
None	No IPR available	PANTHER	PTHR12775:SF0	PROTEIN RTF2 HOMOLOG	coord: 87..385 score: 8.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh10G005120	Cucsa.350920	Cucumber (Gy14) v1	cgycmoB0957
CmoCh10G005120	CmaCh11G004740	Cucurbita maxima (Rimu)	cmacmoB099
CmoCh10G005120	Cla018721	Watermelon (97103) v1	cmowmB063
CmoCh10G005120	Csa1G269330	Cucumber (Chinese Long) v2	cmocuB048
CmoCh10G005120	MELO3C010238	Melon (DHL92) v3.5.1	cmomeB049
CmoCh10G005120	ClCG06G012260	Watermelon (Charleston Gray)	cmowcgB064
CmoCh10G005120	CSPI01G17510	Wild cucumber (PI 183967)	cmocpiB051
CmoCh10G005120	Cp4.1LG18g05470	Cucurbita pepo (Zucchini)	cmocpeB055
CmoCh10G005120	Cp4.1LG04g08840	Cucurbita pepo (Zucchini)	cmocpeB068
CmoCh10G005120	MELO3C010238.2	Melon (DHL92) v3.6.1	cmomedB052
CmoCh10G005120	CsaV3_1G028770	Cucumber (Chinese Long) v3	cmocucB0054
CmoCh10G005120	Cla97C06G121440	Watermelon (97103) v2	cmowmbB070
CmoCh10G005120	Bhi02G000707	Wax gourd	cmowgoB0070
CmoCh10G005120	CsGy1G017700	Cucumber (Gy14) v2	cgybcmoB014
CmoCh10G005120	Carg14097	Silver-seed gourd	carcmoB0688
CmoCh10G005120	Carg09983	Silver-seed gourd	carcmoB0172

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh10G005120	CmoCh11G004710	Cucurbita moschata (Rifu)	cmocmoB038

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh10G005120	Watermelon (97103) v2	cmowmbB061
CmoCh10G005120	Wax gourd	cmowgoB0068
CmoCh10G005120	Cucurbita moschata (Rifu)	cmocmoB000
CmoCh10G005120	Cucumber (Gy14) v1	cgycmoB0743
CmoCh10G005120	Cucurbita maxima (Rimu)	cmacmoB067
CmoCh10G005120	Wild cucumber (PI 183967)	cmocpiB071
CmoCh10G005120	Cucumber (Chinese Long) v2	cmocuB069
CmoCh10G005120	Melon (DHL92) v3.5.1	cmomeB074
CmoCh10G005120	Watermelon (Charleston Gray)	cmowcgB059
CmoCh10G005120	Watermelon (97103) v1	cmowmB049
CmoCh10G005120	Bottle gourd (USVL1VR-Ls)	cmolsiB045
CmoCh10G005120	Bottle gourd (USVL1VR-Ls)	cmolsiB053
CmoCh10G005120	Cucumber (Gy14) v2	cgybcmoB442
CmoCh10G005120	Melon (DHL92) v3.6.1	cmomedB079
CmoCh10G005120	Silver-seed gourd	carcmoB0866
CmoCh10G005120	Cucumber (Chinese Long) v3	cmocucB0071
CmoCh10G005120	Cucumber (Chinese Long) v3	cmocucB0077