CmaCh11G004740 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G004740
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RTF2-like protein
Location	Cma_Chr11 : 2299040 .. 2301336 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATCCGAAAAATCAACACCGTCTTCAGTTCTTCGTCCGTTCTCCCGACCTCCAAATTCAATCCAAAATCGTGAACCTAGCACAAACATCGGCCCAATCCCTCGCGGATCTTAAGTTATCTCTTCTCCTCAACGCGCCTGCTTCACGGTTAGCCTCATCTTTCTACTTCACCCTAAATGGGAAACCTCTCCTCGATTCCGCCACAATTTCCAGTTCTCTAGTTCCCCCTCTGTCCACCTTGATTTTAAGAACCAGGGTCCTTGGGGGCGGTGGTGATGGCGGTGCAACCGGGGCCGAATCCCGTGACTGCTACCTTAAAATGTACGCAGAGAAGAAACCCGATAAGGTCGACCCTAACGAGCAGAGGCTATCCAAGTGGTTGAACTGCGCTCTTTCTAACGAGCCTTTGAGGGAACCTTGTGTGATCGATTGGCTTGGAAATATTTTCAACAAGGAGTCGCTGGTTCACGCGTTGCTGGAGAAGAAGCTGCCAAAAGGTTTCGGACATATCAAGGGTTTGAAGGATATGATCAAGATAAATCTTTCGATGATTCCCGGTACAGAATCGCGTGGCAATGAGATCTCAGAGGCGAGGTTTCAATGCCCGATTACTGGGCTCGAGTTCAATGGTAAGTACAAATTTTTTGCTCTGAGAGCTTGTGGACACGTGCTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCTTCTTCCTGCCTTGTTTGTCATGCTGAGTTTATGGACAGAGACAAGTTTGTGATCAATGGGAGCGAGGAGGAGGTAGTAAGAATGAGGGAGAGGATGGAGGAAGAGAAAACGAAAGCAAAGGAGAAGAAGACGAAGAAAGTGAGGACCGGGGAAGTGGGTATGAATGGAGATGTGAGTGTGGATCTGGCATCATCCCGTTTGTCTGGTAAAAAGCATGGCATTGAAGGTAAGGCTTTGGGTAAGATTTCAGCCAAGCCTGAGAAGCATGAGCGGCCAGATAGTGGAGTTCAGGTAAAGGTTGCGGCAAGTAATGGTGCTGTTAAGCGATTTAAAGCAGCAGACATGGCCCCTGCCAATGCTACCAAAGAAGTCTATGCTTCCATATTCACCTCATCAAGGAAGTCGGATTTTAAGGAGACATATTCTTGTAGATCACTTCCCCTTGGTCGTAATTGATTGCTGTTAAGAACTGCCGAGATTTGTTTATGACAATTCTCCTTGGTCGTAATTGATTGCTGTTAAGAACTGCCAAGATTTGTTTATGACAATTCTCCTTGGTATTGTTTGTATCCAAACCTTCATTTTTAGTGACCTTTCTTGACTTTGTTGATTCATGCTTCATCGTTTCTAATTCATGTAAGATATATAAGTTTTCACTGTCATCTGCTGTTAATGTTTGGGAGTGATTTGGAACAATCAAATCCACTTTGTCATGCTCAGAATGACACAAGTGATTTTGGTCCTTCCAAAATCACTCCTCCCAAACATGAACTTACTCAATAGAACTGTTTCACATTTTTAGATCAGTAAATATTGTTGAAAGTTTGGCGCTGATCAATCCATGATTCTCTGTTTGAGTTGAAATTTGAGGTTTCTAAAATGAAACCCCTGATGAAGTGTGCCTGATCTGCATATTTAGGACTTCAGAGCAGGATCGTTTAGTGTTAGTTTTCTTTTTGTCAAAATATTTCTTAAAGCATGCATTGGTATCAATTATAGTTAGGAGTACCTCTAGGTTGTTATGTGTGTATATATCAATCTCTTCTGAAATATCATGGGTAACGATGACCGACTTTCCATGGACACATAATTGTCGGAGTCGTCTCTCTGTCTAATAGTTCGGGCAAAGTTTCATCCTGGCCAAGCTTGTACTTGTTCAGATTATTGCTTTTTTTTTTATATAAAAAAAATTCTTTACCATGTCATGTCTCTAACTTACAACTTGATGTTCTCTTTGTTGAATCAGAAAATTCTGCTGGAGCTGTGATCTCCGAGCAAGCTAACATCAACTTGTAGCAAAATAAGTAATTATAGTGTGCCCTTCTTGCTTGAACTTTCTTAAAAATCCTATGATTCTTTCGAACTTGAGACTGTAGAGGATTTCTTATTTGGAGTTGTGATGGAAGGGAATGTTCCTACTTGTGTAATAGCTTGTTCTCATCATATATCTCCATCTACTACGGCATCTTGAATAGAATCCACATCCAACCAAGTTGGTTTCAACACTACAGTTGAATAAAATTGTTGATGAAACTAGTATATCTTTGCGAACTCAGTAAAGTTAGGTTTATTTTGTTTGAATCCAATCCTCC

mRNA sequence

ATGTATCCGAAAAATCAACACCGTCTTCAGTTCTTCGTCCGTTCTCCCGACCTCCAAATTCAATCCAAAATCGTGAACCTAGCACAAACATCGGCCCAATCCCTCGCGGATCTTAAGTTATCTCTTCTCCTCAACGCGCCTGCTTCACGGTTAGCCTCATCTTTCTACTTCACCCTAAATGGGAAACCTCTCCTCGATTCCGCCACAATTTCCAGTTCTCTAGTTCCCCCTCTGTCCACCTTGATTTTAAGAACCAGGGTCCTTGGGGGCGGTGGTGATGGCGGTGCAACCGGGGCCGAATCCCGTGACTGCTACCTTAAAATGTACGCAGAGAAGAAACCCGATAAGGTCGACCCTAACGAGCAGAGGCTATCCAAGTGGTTGAACTGCGCTCTTTCTAACGAGCCTTTGAGGGAACCTTGTGTGATCGATTGGCTTGGAAATATTTTCAACAAGGAGTCGCTGGTTCACGCGTTGCTGGAGAAGAAGCTGCCAAAAGGTTTCGGACATATCAAGGGTTTGAAGGATATGATCAAGATAAATCTTTCGATGATTCCCGGTACAGAATCGCGTGGCAATGAGATCTCAGAGGCGAGGTTTCAATGCCCGATTACTGGGCTCGAGTTCAATGGTAAGTACAAATTTTTTGCTCTGAGAGCTTGTGGACACGTGCTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCTTCTTCCTGCCTTGTTTGTCATGCTGAGTTTATGGACAGAGACAAGTTTGTGATCAATGGGAGCGAGGAGGAGGTAGTAAGAATGAGGGAGAGGATGGAGGAAGAGAAAACGAAAGCAAAGGAGAAGAAGACGAAGAAAGTGAGGACCGGGGAAGTGGGTATGAATGGAGATGTGAGTGTGGATCTGGCATCATCCCGTTTGTCTGGTAAAAAGCATGGCATTGAAGGTAAGGCTTTGGGTAAGATTTCAGCCAAGCCTGAGAAGCATGAGCGGCCAGATAGTGGAGTTCAGGTAAAGGTTGCGGCAAGTAATGGTGCTGTTAAGCGATTTAAAGCAGCAGACATGGCCCCTGCCAATGCTACCAAAGAAGTCTATGCTTCCATATTCACCTCATCAAGGAAGTCGGATTTTAAGGAGACATATTCTTGTAGATCACTTCCCCTTGGTCAAAATTCTGCTGGAGCTGTGATCTCCGAGCAAGCTAACATCAACTTGTAGCAAAATAAGTAATTATAGTGTGCCCTTCTTGCTTGAACTTTCTTAAAAATCCTATGATTCTTTCGAACTTGAGACTGTAGAGGATTTCTTATTTGGAGTTGTGATGGAAGGGAATGTTCCTACTTGTGTAATAGCTTGTTCTCATCATATATCTCCATCTACTACGGCATCTTGAATAGAATCCACATCCAACCAAGTTGGTTTCAACACTACAGTTGAATAAAATTGTTGATGAAACTAGTATATCTTTGCGAACTCAGTAAAGTTAGGTTTATTTTGTTTGAATCCAATCCTCC

Coding sequence (CDS)

ATGTATCCGAAAAATCAACACCGTCTTCAGTTCTTCGTCCGTTCTCCCGACCTCCAAATTCAATCCAAAATCGTGAACCTAGCACAAACATCGGCCCAATCCCTCGCGGATCTTAAGTTATCTCTTCTCCTCAACGCGCCTGCTTCACGGTTAGCCTCATCTTTCTACTTCACCCTAAATGGGAAACCTCTCCTCGATTCCGCCACAATTTCCAGTTCTCTAGTTCCCCCTCTGTCCACCTTGATTTTAAGAACCAGGGTCCTTGGGGGCGGTGGTGATGGCGGTGCAACCGGGGCCGAATCCCGTGACTGCTACCTTAAAATGTACGCAGAGAAGAAACCCGATAAGGTCGACCCTAACGAGCAGAGGCTATCCAAGTGGTTGAACTGCGCTCTTTCTAACGAGCCTTTGAGGGAACCTTGTGTGATCGATTGGCTTGGAAATATTTTCAACAAGGAGTCGCTGGTTCACGCGTTGCTGGAGAAGAAGCTGCCAAAAGGTTTCGGACATATCAAGGGTTTGAAGGATATGATCAAGATAAATCTTTCGATGATTCCCGGTACAGAATCGCGTGGCAATGAGATCTCAGAGGCGAGGTTTCAATGCCCGATTACTGGGCTCGAGTTCAATGGTAAGTACAAATTTTTTGCTCTGAGAGCTTGTGGACACGTGCTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCTTCTTCCTGCCTTGTTTGTCATGCTGAGTTTATGGACAGAGACAAGTTTGTGATCAATGGGAGCGAGGAGGAGGTAGTAAGAATGAGGGAGAGGATGGAGGAAGAGAAAACGAAAGCAAAGGAGAAGAAGACGAAGAAAGTGAGGACCGGGGAAGTGGGTATGAATGGAGATGTGAGTGTGGATCTGGCATCATCCCGTTTGTCTGGTAAAAAGCATGGCATTGAAGGTAAGGCTTTGGGTAAGATTTCAGCCAAGCCTGAGAAGCATGAGCGGCCAGATAGTGGAGTTCAGGTAAAGGTTGCGGCAAGTAATGGTGCTGTTAAGCGATTTAAAGCAGCAGACATGGCCCCTGCCAATGCTACCAAAGAAGTCTATGCTTCCATATTCACCTCATCAAGGAAGTCGGATTTTAAGGAGACATATTCTTGTAGATCACTTCCCCTTGGTCAAAATTCTGCTGGAGCTGTGATCTCCGAGCAAGCTAACATCAACTTGTAG

Protein sequence

MYPKNQHRLQFFVRSPDLQIQSKIVNLAQTSAQSLADLKLSLLLNAPASRLASSFYFTLNGKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFGHIKGLKDMIKINLSMIPGTESRGNEISEARFQCPITGLEFNGKYKFFALRACGHVLSAKALKEVKSSSCLVCHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKAKEKKTKKVRTGEVGMNGDVSVDLASSRLSGKKHGIEGKALGKISAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVYASIFTSSRKSDFKETYSCRSLPLGQNSAGAVISEQANINL

Homology

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BLAST of CmaCh11G004740 vs. Swiss-Prot
Match: RTF2_RAT (Protein RTF2 homolog OS=Rattus norvegicus GN=Rtfdc1 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.1e-34
Identity = 101/271 (37.27%), Postives = 148/271 (54.61%), Query Frame = 1


Query: 112 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFG-- 171
           KK +KVD + + +++W  C LS E LR P V   LG ++NK++++  LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEVLRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 172 --HIKGLKDMIKINLSMIPGTES-RGN-------EISEARFQCPITGLEFNGKYKFFALR 231
             HI+ +K++ ++ LS  P  E  +GN       ++  ARF CP+ GLE NG+++F  LR
Sbjct: 79  TSHIRSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 232 ACGHVLSAKALKEVKSSSCLVCHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKAK-EKK 291
            CG V S +ALKE+K+  C  C A F + D  V+NG++E+V  ++ RMEE + +AK EKK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKRRMEERRLRAKLEKK 198

Query: 292 TKKVRTGEVGMNGDVSVDLA--SSRLSGKKHGIEGKALGKISAKPEKHERPDSGVQVKVA 351
           TKK +T E      +S D A  S   +GK    +     K S+   +    +     KV 
Sbjct: 199 TKKPKTAESASKLGISQDSAGPSKAKAGKSEEADPDPREKKSSLAPRGTASNGSASGKVG 258

Query: 352 ASN-GAVKRFKAADMAPANATKEVYASIFTS 367
               GA+KR   AD    +   E Y SIFTS
Sbjct: 259 KPPCGALKR-SIAD----SEESETYKSIFTS 284

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BLAST of CmaCh11G004740 vs. Swiss-Prot
Match: RTF2_MACFA (Protein RTF2 homolog OS=Macaca fascicularis GN=RTFDC1 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.3e-32
Identity = 81/196 (41.33%), Postives = 118/196 (60.20%), Query Frame = 1


Query: 112 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFG-- 171
           KK +KVD + + +++W  C LS E LR P V   LG ++NK++++  LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 172 --HIKGLKDMIKINLSMIPGTES-RGN-------EISEARFQCPITGLEFNGKYKFFALR 231
             HIK +K++ ++ LS  P  E  +GN       ++  ARF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 232 ACGHVLSAKALKEVKSSSCLVCHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKAK-EKK 291
            CG V S +ALKE+K+  C  C A F + D  V+NG+ E+V  ++ RMEE + +AK EKK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTNEDVDVLKARMEERRLRAKLEKK 198

Query: 292 TKKVRTGEVGMNGDVS 295
           TKK +  E     DVS
Sbjct: 199 TKKPKAAESVSKPDVS 214

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BLAST of CmaCh11G004740 vs. Swiss-Prot
Match: RTF2_MOUSE (Protein RTF2 homolog OS=Mus musculus GN=Rtfdc1 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.7e-32
Identity = 101/272 (37.13%), Postives = 147/272 (54.04%), Query Frame = 1


Query: 112 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFG-- 171
           KK +KVD + + +++W  C LS E LR P V   LG ++NK++++  LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 172 --HIKGLKDMIKINLSMIPGTES-RGN-------EISEARFQCPITGLEFNGKYKFFALR 231
             HI+ +K++ ++ LS  P  E  +GN       ++  ARF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIRSIKNVTELRLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 232 ACGHVLSAKALKEVKSSSCLVCHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKAK-EKK 291
            CG V S +ALKE+K+  C  C A F + D  V+NG++E+V  +++RMEE + +AK EKK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKKRMEERRLRAKLEKK 198

Query: 292 TKKVRTG-EVGMNGDVSVDLA--SSRLSGKKHGIEGKALGKISAKPEKHERPDSGVQVKV 351
           TKK +T  E       + D A  S   SGK    +     K S    +    +     KV
Sbjct: 199 TKKPKTATECASKPGTTQDSAGPSKVKSGKPEEADPDPREKKSTPAPRGAATNGSASGKV 258

Query: 352 AASN-GAVKRFKAADMAPANATKEVYASIFTS 367
                GA+KR   AD    +   E Y SIFTS
Sbjct: 259 GKPPCGALKR-SIAD----SEESETYKSIFTS 285

[Close]

BLAST of CmaCh11G004740 vs. Swiss-Prot
Match: RTF2_PONAB (Protein RTF2 homolog OS=Pongo abelii GN=RTFDC1 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 8.4e-32
Identity = 102/291 (35.05%), Postives = 150/291 (51.55%), Query Frame = 1


Query: 112 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFG-- 171
           KK +KVD + + +++W  C LS E LR P V   LG ++NK++++  LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 172 --HIKGLKDMIKINLSMIPGTES-RGN-------EISEARFQCPITGLEFNGKYKFFALR 231
             HIK +K++ ++ LS  P  E  +GN       ++  ARF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 232 ACGHVLSAKALKEVKSSSCLVCHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKAK-EKK 291
            CG V S +ALKE+K+  C  C A F + D  V+NG++E+V  ++ RMEE + +AK EKK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVDVLKTRMEERRLRAKLEKK 198

Query: 292 TKKVRTGEVGMNGDVSVDLASSRLSGKKHGIEGKALGKI-SAKPEKHERPDSGVQVKVAA 351
           TKK +  E     DVS               E     K+ + KPE+        +  +A 
Sbjct: 199 TKKPKAAESVSKPDVSE--------------EAPGPSKVKTGKPEEASLDSREKKTNLAP 258

Query: 352 SNGAVKRFKA--ADMAPANATK---------EVYASIFT--SSRKSDFKET 376
            + A     +  A   P  ATK         E Y S+FT  SS K   +E+
Sbjct: 259 KSTATNESSSGKAGKPPCGATKRSIADSEESEAYKSLFTTHSSAKRSKEES 295

[Close]

BLAST of CmaCh11G004740 vs. Swiss-Prot
Match: RTF2_HUMAN (Protein RTF2 homolog OS=Homo sapiens GN=RTFDC1 PE=1 SV=3)

HSP 1 Score: 138.7 bits (348), Expect = 1.4e-31
Identity = 101/291 (34.71%), Postives = 151/291 (51.89%), Query Frame = 1


Query: 112 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFG-- 171
           KK +KVD + + +++W  C LS E LR P V   LG ++NK++++  LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 172 --HIKGLKDMIKINLSMIPGTES-RGN-------EISEARFQCPITGLEFNGKYKFFALR 231
             HIK +K++ ++ LS  P  E  +GN       ++  ARF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 232 ACGHVLSAKALKEVKSSSCLVCHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKAK-EKK 291
            CG V S +ALKE+K+  C  C A F + D  ++NG++E+V  ++ RMEE + +AK EKK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIMLNGTKEDVDVLKTRMEERRLRAKLEKK 198

Query: 292 TKKVRTGEVGMNGDVSVDLASSRLSGKKHGIEGKALGKI-SAKPEKHERPDSGVQVKVAA 351
           TKK +  E     DVS               E     K+ + KPE+        +  +A 
Sbjct: 199 TKKPKAAESVSKPDVSE--------------EAPGPSKVKTGKPEEASLDSREKKTNLAP 258

Query: 352 SNGAVKRFKA--ADMAPANATK---------EVYASIFT--SSRKSDFKET 376
            + A+    +  A   P  ATK         E Y S+FT  SS K   +E+
Sbjct: 259 KSTAMNESSSGKAGKPPCGATKRSIADSEESEAYKSLFTTHSSAKRSKEES 295

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BLAST of CmaCh11G004740 vs. TrEMBL
Match: A0A0A0LTI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G269330 PE=4 SV=1)

HSP 1 Score: 646.7 bits (1667), Expect = 1.8e-182
Identity = 334/388 (86.08%), Postives = 352/388 (90.72%), Query Frame = 1


Query: 1   MYPKNQHRLQFFVRSPDLQIQSKIVNLAQTSAQSLADLKLSLLLNAPASRLASSFYFTLN 60
           M+PKNQHR Q F++SPDLQI+SKIVNL QT A++L DLK SLL    ASR+ASSFYFTLN
Sbjct: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60

Query: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120
           GKPLLDS TIS  L+PPLSTLILRTRVLGGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTTIS--LIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGN+FNKESLV ALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSMIPGTESRGNEISEARFQCPITGLEFNGKYKFFALRACGHVLSAKALKEVKSSSCLV 240
           N SMIPGTESRGN ISE R+QCP+TGLEFNGKYKFFALR CGHVLSAKALKEVKSSSCLV
Sbjct: 181 NFSMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEE--KTKAKEKKTKKVRTGEVGMNGDVSVDLA 300
           CHAEF +RDKFVINGSEEEV  MRERMEEE  K+K+KEKKTKKVR GEVGMNGDVSVDLA
Sbjct: 241 CHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLA 300

Query: 301 SSRLSGKKHGIEGKALGKISAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKE 360
            SRLSGKKH IE K+L K+SAKPE+ ER D G QVK A SNGAVKRFKAADM PANATKE
Sbjct: 301 ISRLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLGQN 387
           VYASIFTSSRKSDFKETYSCRSLPLG+N
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CmaCh11G004740 vs. TrEMBL
Match: M5VW12_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007127mg PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 2.6e-133
Identity = 253/387 (65.37%), Postives = 296/387 (76.49%), Query Frame = 1


Query: 1   MYPKNQHRLQFFVRSPDLQIQSKIVNLAQTSAQSLADLKLSLLLNAPASRLASSFYFTLN 60
           M+PK  H  Q F++SPDLQI ++ + LA T   +L  LKLS+      S    S YFTLN
Sbjct: 1   MHPK-LHNFQIFLQSPDLQIPTQTITLAPTQTPTLRHLKLSIF-----SHTLPSLYFTLN 60

Query: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120
           GKPL DS  +  S + PLSTL+LR R  GGGGDGGATGAESRDCYLKMYAEKKPDKVDPN
Sbjct: 61  GKPLNDSTPLLDSQITPLSTLVLRIRACGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNC+LSNEPL+EPCV+D+LGN+FNKE LV ALL KK+PK FGHIKGLKDMI +
Sbjct: 121 EQRLSKWLNCSLSNEPLKEPCVVDFLGNVFNKEPLVEALLGKKVPKAFGHIKGLKDMITV 180

Query: 181 NLSMIPGTES-RGNEISEARFQCPITGLEFNGKYKFFALRACGHVLSAKALKEVKSSSCL 240
           + S IPGTES R +  +  RFQCPI+G+EFNGK KF AL+ CGHVLSAKALKEVKSS+CL
Sbjct: 181 HFSPIPGTESNRRSSAAGPRFQCPISGVEFNGKCKFLALKTCGHVLSAKALKEVKSSTCL 240

Query: 241 VCHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKAKEKKTKKVRTGEVGMNGDVSVDLAS 300
           VCHA F + DK VING+EEEV  +R+RME EK K + KK KK + G+  +NG+  +   +
Sbjct: 241 VCHAGFSEADKIVINGNEEEVAALRDRMEAEKAKGRVKKMKKTKNGDATLNGEEGMGFEA 300

Query: 301 SRLSGKKHGIEGKALGKISAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEV 360
           SRLSG KHGI+ KA+ K SA  E H +  +G       SNGA KRFKA D+AP NATKEV
Sbjct: 301 SRLSGTKHGIDVKAVEKASANVEVHGKVVNGGDNVKGVSNGAAKRFKAVDIAPPNATKEV 360

Query: 361 YASIFTSSRKSDFKETYSCRSLPLGQN 387
           YASIFTSSRKS+FKETYSCRSLPLG+N
Sbjct: 361 YASIFTSSRKSEFKETYSCRSLPLGRN 381

[Close]

BLAST of CmaCh11G004740 vs. TrEMBL
Match: W9QY07_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003302 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 1.9e-131
Identity = 259/389 (66.58%), Postives = 300/389 (77.12%), Query Frame = 1


Query: 8   RLQFFVRSPDLQIQSKIVNLAQTSAQSLADLKLSLLLNAPASRLASSFYFTLNGKPLLDS 67
           R+Q FV SPDLQ  +K + L  T +Q+L  LKL L      S + SS YFTLNGK L D 
Sbjct: 7   RMQIFVESPDLQTPTKTLTLTPTKSQTLRSLKLFLF----PSEILSSCYFTLNGKRLDDD 66

Query: 68  ATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPNEQRLSKW 127
           ++I SS + PLSTLILR+R  GGGGDGGATGAESRDCYL MYAEKKPDKVDPNEQRLSKW
Sbjct: 67  SSILSSQIAPLSTLILRSRARGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKW 126

Query: 128 LNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFGHIKGLKDMIKINLSMIPG 187
           LNCALSNEPL+EPCV+DWLGN+FNKE+LV ALL K +PK FGH+KGLKDMIKI LS+IPG
Sbjct: 127 LNCALSNEPLKEPCVVDWLGNVFNKEALVQALLGKNIPKAFGHVKGLKDMIKIQLSVIPG 186

Query: 188 TESRGNEIS--EARFQCPITGLEFNGKYKFFALRACGHVLSAKALKEVKSSSCLVCHAEF 247
            E  G+  S   ARFQCPITGLEFNGKYKFF+LR CGHVLSAKALKEVK+SSCLVCH EF
Sbjct: 187 VEEDGDRDSGARARFQCPITGLEFNGKYKFFSLRKCGHVLSAKALKEVKTSSCLVCHVEF 246

Query: 248 MDRDKFVINGSEEEVVRMRERMEEEKTKAKEKKTKKVRTGEVGMNGDVSVDLASSRLSGK 307
            + DK VINGS+EEV+ +RERME EK K KEKK KKV+ G  G++ D      S+RLSG 
Sbjct: 247 SESDKIVINGSDEEVMVLRERMEMEKGKLKEKKGKKVKNGGDGLDSD------SARLSGT 306

Query: 308 KHGI------EGKALGKISAKPEKHERPDSGVQV--KVAASNGAVKRFKAADMAPANATK 367
           KHGI      + KAL K+ A   K  +  S V++  K +++  A KRFKA D+APANA K
Sbjct: 307 KHGIGDGVKADWKALSKVEA-DGKVGKAASNVRIPFKSSSNGNAAKRFKATDIAPANANK 366

Query: 368 EVYASIFTSSRKSDFKETYSCRSLPLGQN 387
           EVYASIFTSS+KSDFKET++CRSLPLG+N
Sbjct: 367 EVYASIFTSSKKSDFKETFTCRSLPLGRN 384

[Close]

BLAST of CmaCh11G004740 vs. TrEMBL
Match: F6HYI7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00090 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 6.3e-127
Identity = 252/387 (65.12%), Postives = 297/387 (76.74%), Query Frame = 1


Query: 1   MYPKNQHRLQFFVRSPDLQIQSKIVNLAQTSAQSLADLKLSLLLNAPASRLASSFYFTLN 60
           M+   Q ++Q  ++SPDL I ++ + L   S  +L +LKLSLL   P   L  SF+FTL+
Sbjct: 1   MHTPKQSQIQILIQSPDLPIATRALTLNPNS--TLRNLKLSLL---PPQTL-DSFFFTLH 60

Query: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120
           GK L DS+T+  S + PLSTL+LR R+ GGGGDGGATGAESRDCYL MYA KKPDKVDPN
Sbjct: 61  GKALHDSSTLQKSGINPLSTLVLRFRLPGGGGDGGATGAESRDCYLNMYAVKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKW  C+LS EPLR PCV+D LGN+FNKE+LV  LL KKLPK FGHI+GLKDM+ I
Sbjct: 121 EQRLSKWTTCSLSFEPLRHPCVVDRLGNVFNKEALVEGLLGKKLPKAFGHIRGLKDMVPI 180

Query: 181 NLSMIPGTESRGNEISE-ARFQCPITGLEFNGKYKFFALRACGHVLSAKALKEVKSSSCL 240
            LS+IPG ES    +S  AR+QCPITGLEFNGKY+FFAL+ CGHVLSAKALKEVKSS+CL
Sbjct: 181 ELSVIPGLESDNGGVSAGARYQCPITGLEFNGKYRFFALKTCGHVLSAKALKEVKSSACL 240

Query: 241 VCHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKAKEKKTKKVRTGEVGMNGDVSVDLAS 300
           VCH  F + DK  INGSEEEV  +RERMEEE+ K +EKK KKV+ GEVG+NGD  V L  
Sbjct: 241 VCHEGFKEEDKIPINGSEEEVAALRERMEEERAKLREKKAKKVKNGEVGVNGDEDVYL-D 300

Query: 301 SRLSGKKHGIEGKALGKISAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEV 360
           SRLSGKKHGI+ KA+G++ AK EK+ +  +G  V V      VKR KAA + P NATKEV
Sbjct: 301 SRLSGKKHGIDAKAVGRVDAKMEKNGKAVNG-GVVVKGEISGVKRLKAAQV-PPNATKEV 360

Query: 361 YASIFTSSRKSDFKETYSCRSLPLGQN 387
           YASIFTSSRKS+FKETY CRSLPLG+N
Sbjct: 361 YASIFTSSRKSEFKETYMCRSLPLGRN 378

[Close]

BLAST of CmaCh11G004740 vs. TrEMBL
Match: K7K9Q4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G202400 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 2.0e-125
Identity = 250/382 (65.45%), Postives = 287/382 (75.13%), Query Frame = 1


Query: 5   NQHRLQFFVRSPDLQIQSKIVNLAQTSAQSLADLKLSLLLNAPASRLASSFYFTLNGKPL 64
           N   LQ  V SPDL I  +    + T+ ++L+DLK SL    P S    SFYFT NGKPL
Sbjct: 2   NTKSLQILVHSPDLGISLQ----STTNHETLSDLKNSLF---PQSH--QSFYFTFNGKPL 61

Query: 65  LDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPNEQRL 124
            D   +S    PPLSTL LR+R+LGGGGDGGATGAESRDCYL MYA+KKPDKVDPNEQRL
Sbjct: 62  PDKTPLSQ--FPPLSTLSLRSRLLGGGGDGGATGAESRDCYLNMYADKKPDKVDPNEQRL 121

Query: 125 SKWLNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFGHIKGLKDMIKINLSM 184
           SKW NCALSNEPLREPCVID LGNIFNKE+LV ALL KKLPK FGHIKGLKDMI + LS 
Sbjct: 122 SKWHNCALSNEPLREPCVIDKLGNIFNKEALVEALLGKKLPKEFGHIKGLKDMINVQLSA 181

Query: 185 IPGTESRGNEISEARFQCPITGLEFNGKYKFFALRACGHVLSAKALKEVKSSSCLVCHAE 244
           IPG +        A+FQCP+ GLEFNGKY+FFALR CGHVLSAKAL+EVKSSSCLVCH E
Sbjct: 182 IPGAD------DGAKFQCPVAGLEFNGKYRFFALRNCGHVLSAKALREVKSSSCLVCHKE 241

Query: 245 FMDRDKFVINGSEEEVVRMRERMEEEKTKAKEKKTKKVRTGEVGMNGDVSVDLASSRLSG 304
           + D DK V+NGS+EEV  +RERMEEEK K +EKK+KKV+        D  V L  +RLSG
Sbjct: 242 YADVDKVVLNGSDEEVAVLRERMEEEKAKIREKKSKKVKNN----GNDDGVSLEGTRLSG 301

Query: 305 KKHGIEGKALGKISAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVYASIF 364
            KHG++GK + K SAK E++ +  +G       +  A KRFKA D+APANATK+VYASIF
Sbjct: 302 TKHGVDGKGVEKASAKVERNGKVGNGNVGVNGGAAAAAKRFKAVDLAPANATKDVYASIF 361

Query: 365 TSSRKSDFKETYSCRSLPLGQN 387
           TSSRKS+FKETYSCRSLPLG+N
Sbjct: 362 TSSRKSEFKETYSCRSLPLGRN 362

[Close]

BLAST of CmaCh11G004740 vs. TAIR10
Match: AT5G58020.1 (AT5G58020.1 unknown protein)

HSP 1 Score: 392.1 bits (1006), Expect = 4.1e-109
Identity = 225/384 (58.59%), Postives = 262/384 (68.23%), Query Frame = 1


Query: 8   RLQFFVRSPDLQIQSKIVNLAQTSAQSLADLK-LSLLLNAPASRLASSFYFTLNGKPLLD 67
           R Q FV+SPD Q   K+V L    AQSL  L  ++ LL +      S+   TL+GK L  
Sbjct: 4   RRQIFVKSPDCQ---KVVALQLDPAQSLLTLSGITSLLESSQRISFSACSITLDGKLLNG 63

Query: 68  SATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPNEQRLSK 127
           S  I  S +P +S L L  R+ GGGGDGGATGAESRDCYL MYAEKKPDKVDPNEQRLSK
Sbjct: 64  STRIQVSKLPSVSMLTLFPRLRGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSK 123

Query: 128 WLNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFGHIKGLKDMIKINLSMIP 187
           WLNCALSNEPL EPCVID LGN+FNKE LVHALL K+LPK F +IKGLKDM+ I L+ + 
Sbjct: 124 WLNCALSNEPLAEPCVIDLLGNLFNKEVLVHALLSKRLPKQFSYIKGLKDMVNIKLTPVA 183

Query: 188 GTESRGNEISEARFQCPITGLEFNGKYKFFALRACGHVLSAKALKEVKSSSCLVCHAEFM 247
           G++    + + A+FQCP++GLEFNGKYKFFALR CGHV+SAKALKEVKSSSCLVCHA+  
Sbjct: 184 GSDGSSQDTTSAQFQCPVSGLEFNGKYKFFALRGCGHVMSAKALKEVKSSSCLVCHADVK 243

Query: 248 DRDKFVINGSEEEVVRMRERMEEEKTKAKEKK--TKKVRTGEVGMNGDVSVDLASSRLSG 307
           D DK VING+EEEV  +RERMEEEK K +EKK  +KK + G                   
Sbjct: 244 DSDKIVINGTEEEVDLLRERMEEEKAKLREKKGVSKKSKNGAA----------------- 303

Query: 308 KKHGIEGKALGKISAKPEKHERPDSGVQVKVAASNG-AVKRFKAADMAPANATKEVYASI 367
                    +    AK  K +  D  V       NG  VK+FKAAD  P NATKEVYAS+
Sbjct: 304 --------VVADTGAKVAKRQIEDGNVN-----GNGITVKKFKAADKVPVNATKEVYASL 354

Query: 368 FTSS-RKSDFKETYSCRSLPLGQN 387
           FTSS +KSDF+ETYSCRSLPLG+N
Sbjct: 364 FTSSKKKSDFRETYSCRSLPLGRN 354

[Close]

BLAST of CmaCh11G004740 vs. NCBI nr
Match: gi|659086633|ref|XP_008444038.1| (PREDICTED: protein RTF2 homolog [Cucumis melo])

HSP 1 Score: 650.2 bits (1676), Expect = 2.3e-183
Identity = 336/388 (86.60%), Postives = 354/388 (91.24%), Query Frame = 1


Query: 1   MYPKNQHRLQFFVRSPDLQIQSKIVNLAQTSAQSLADLKLSLLLNAPASRLASSFYFTLN 60
           M+PKNQHRLQ F+ SPDLQIQSKIV+L QTSA++L DLK SLL    ASR+ASS YFTLN
Sbjct: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60

Query: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120
           GKPLLDS TIS  L+PPLSTLILRTRVLGGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTTIS--LIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPL EPCVIDWLGN+FNKESLV ALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSMIPGTESRGNEISEARFQCPITGLEFNGKYKFFALRACGHVLSAKALKEVKSSSCLV 240
           N SMIPGTESRGN ISE RFQCPITGLEFNGKYKFFALR CGHVLSAKALKEVKSSSCLV
Sbjct: 181 NFSMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEE--KTKAKEKKTKKVRTGEVGMNGDVSVDLA 300
           CH EF +RDKFVINGSEEEV  MRERMEEE  K+K+KEKKTKKVR GEVGMNGDV++DLA
Sbjct: 241 CHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLA 300

Query: 301 SSRLSGKKHGIEGKALGKISAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKE 360
           +SRLSGKKHGIE + L K+SAKPE+HER D G QVKVAASNGAVKRFKAADM PANATKE
Sbjct: 301 TSRLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLGQN 387
           VYASIFTSSRKSDFKETYSCRSLPLG+N
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CmaCh11G004740 vs. NCBI nr
Match: gi|778660265|ref|XP_011655923.1| (PREDICTED: protein RTF2 homolog [Cucumis sativus])

HSP 1 Score: 646.7 bits (1667), Expect = 2.6e-182
Identity = 334/388 (86.08%), Postives = 352/388 (90.72%), Query Frame = 1


Query: 1   MYPKNQHRLQFFVRSPDLQIQSKIVNLAQTSAQSLADLKLSLLLNAPASRLASSFYFTLN 60
           M+PKNQHR Q F++SPDLQI+SKIVNL QT A++L DLK SLL    ASR+ASSFYFTLN
Sbjct: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60

Query: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120
           GKPLLDS TIS  L+PPLSTLILRTRVLGGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTTIS--LIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGN+FNKESLV ALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSMIPGTESRGNEISEARFQCPITGLEFNGKYKFFALRACGHVLSAKALKEVKSSSCLV 240
           N SMIPGTESRGN ISE R+QCP+TGLEFNGKYKFFALR CGHVLSAKALKEVKSSSCLV
Sbjct: 181 NFSMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEE--KTKAKEKKTKKVRTGEVGMNGDVSVDLA 300
           CHAEF +RDKFVINGSEEEV  MRERMEEE  K+K+KEKKTKKVR GEVGMNGDVSVDLA
Sbjct: 241 CHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLA 300

Query: 301 SSRLSGKKHGIEGKALGKISAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKE 360
            SRLSGKKH IE K+L K+SAKPE+ ER D G QVK A SNGAVKRFKAADM PANATKE
Sbjct: 301 ISRLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLGQN 387
           VYASIFTSSRKSDFKETYSCRSLPLG+N
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CmaCh11G004740 vs. NCBI nr
Match: gi|1009109846|ref|XP_015892443.1| (PREDICTED: protein RTF2 homolog [Ziziphus jujuba])

HSP 1 Score: 493.4 bits (1269), Expect = 3.7e-136
Identity = 271/391 (69.31%), Postives = 309/391 (79.03%), Query Frame = 1


Query: 1   MYPKNQHRLQFFVRSPDLQIQSKIVNLAQTSAQSLADLKLSLLLNAPASRLASSFYFTLN 60
           MY     R Q FV+S DL+I ++ ++L  T +Q++ DLKLSL  N   SR  SS YFTLN
Sbjct: 1   MYRNPFDRFQIFVQSLDLEISTRTLSLTPTESQTIRDLKLSLFPNHLPSRSPSSLYFTLN 60

Query: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120
           GKPL DS+ I  S + PLSTLILRTR  GGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLDDSSRILGSQIAPLSTLILRTRARGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKW NCALS+EPL+EPCV+D+LGN+FNK SLV ALL KK+PK FGHIKGLKDMI I
Sbjct: 121 EQRLSKWQNCALSSEPLKEPCVVDFLGNVFNKVSLVEALLGKKMPKEFGHIKGLKDMINI 180

Query: 181 NLSMIPGTESRGNEISE-ARFQCPITGLEFNGKYKFFALRACGHVLSAKALKEVKSSSCL 240
            LS IPG +  G+  S  ARFQCPITGLEFNGKYKFFALR CGHVLSAKAL+EVKSSSCL
Sbjct: 181 QLSAIPGIDRDGDGFSAGARFQCPITGLEFNGKYKFFALRTCGHVLSAKALREVKSSSCL 240

Query: 241 VCHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKAKEKKTKKVRT-GEVG-MNGDVSVDL 300
           VCH EF + DK VINGS+EEV  +R+ ME EK K +EKK+KKVR  GEV  +NGD  V +
Sbjct: 241 VCHKEFTETDKIVINGSDEEVKVLRDMMEAEKAKLREKKSKKVRNGGEVEVVNGDKGVAV 300

Query: 301 ASSRLSGKKHGIEGKALGKISAKPEKHERPDSGV-QVKVAAS-NGAVKRFKAADMAPANA 360
            SSRLSGKKHGI+ KA  K  AK E + +  +G   +K AA+ NGAVKRFKAAD+AP NA
Sbjct: 301 DSSRLSGKKHGIDNKAGEKAVAKVEGNGKVANGANSLKGAANGNGAVKRFKAADIAPPNA 360

Query: 361 TKEVYASIFTSSRKSDFKETYSCRSLPLGQN 387
            KEVYASIFTSS+KSDFKET+SCRSLPLG+N
Sbjct: 361 NKEVYASIFTSSKKSDFKETFSCRSLPLGRN 391

[Close]

BLAST of CmaCh11G004740 vs. NCBI nr
Match: gi|1021473603|ref|XP_016200126.1| (PREDICTED: protein RTF2 homolog [Arachis ipaensis])

HSP 1 Score: 489.6 bits (1259), Expect = 5.3e-135
Identity = 273/391 (69.82%), Postives = 308/391 (78.77%), Query Frame = 1


Query: 1   MYPKNQHRLQFFVRSPDLQIQSKIVNLAQTSAQ----SLADLKLSLLLNAPASRLASSFY 60
           M+PK+    QFFV+SP+LQI S+ V ++  +      SL+ LK SLL   P S+ +S FY
Sbjct: 1   MHPKSH---QFFVQSPELQISSQSVTVSSATTHNEIHSLSHLKRSLL---PKSQYSSFFY 60

Query: 61  FTLNGKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDK 120
           FTLNGK L D   +SSS +PP S L+LR+R+LGGGGDGGATGAESRDCYL MYA KKPDK
Sbjct: 61  FTLNGKTLPDETLLSSSQIPPFSHLLLRSRLLGGGGDGGATGAESRDCYLNMYAVKKPDK 120

Query: 121 VDPNEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFGHIKGLKD 180
           VDPNEQRLSKWLNCALSNEPL EPCVID LGNIFNKESLV AL+ KKLPK FGHIKGLKD
Sbjct: 121 VDPNEQRLSKWLNCALSNEPLTEPCVIDKLGNIFNKESLVEALIGKKLPKEFGHIKGLKD 180

Query: 181 MIKINLSMIPGTESRGNEISEARFQCPITGLEFNGKYKFFALRACGHVLSAKALKEVKSS 240
           MIK++LS+IPG    GN  S ARFQCPI GLEFNGKYKFFALR CGHVLSAKALKEVKSS
Sbjct: 181 MIKVHLSLIPGV---GNMGSGARFQCPIAGLEFNGKYKFFALRNCGHVLSAKALKEVKSS 240

Query: 241 SCLVCHAEFMDRDKFVINGSEEEVVRMRERMEEEKTK-AKEKKTKKVRTGEVGMNGDVSV 300
           SCLVCH+EF + DK  INGSEEEV  +RE+MEEEK K  KEKK+KKV+ G  G+NGD   
Sbjct: 241 SCLVCHSEFREGDKIPINGSEEEVAVLREKMEEEKAKTTKEKKSKKVKNGG-GVNGD--- 300

Query: 301 DLASSRLSGKKHGIEGKALGKISAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANA 360
           DL  SRLSG KHGI+ KA+ K SAK E +      ++    AS  A KRFKA+D+APANA
Sbjct: 301 DLEGSRLSGTKHGIDVKAVEKASAKVEANNNGKVSLKGVNDASAAAAKRFKASDLAPANA 360

Query: 361 TKEVYASIFTSSRKSDFKETYSCRSLPLGQN 387
           TKEVYASIFTSSRKSDFKETYSCRSLPLG+N
Sbjct: 361 TKEVYASIFTSSRKSDFKETYSCRSLPLGRN 378

[Close]

BLAST of CmaCh11G004740 vs. NCBI nr
Match: gi|1012001716|ref|XP_015932787.1| (PREDICTED: protein RTF2 homolog [Arachis duranensis])

HSP 1 Score: 485.0 bits (1247), Expect = 1.3e-133
Identity = 269/391 (68.80%), Postives = 307/391 (78.52%), Query Frame = 1


Query: 1   MYPKNQHRLQFFVRSPDLQIQSKIVNLAQTSAQ----SLADLKLSLLLNAPASRLASSFY 60
           M+PK+    QFFV+ P+LQI S+ V ++  +      SL+ LK SLL   P S+ +S FY
Sbjct: 1   MHPKSH---QFFVQLPELQIPSQSVTVSSAATHNEIHSLSHLKRSLL---PKSQYSSFFY 60

Query: 61  FTLNGKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDK 120
           FTLNGK L D   +SSS +PP S L+LR+R+LGGGGDGGATGAESRDCYL MYA KKPDK
Sbjct: 61  FTLNGKTLPDETLLSSSQIPPFSNLLLRSRLLGGGGDGGATGAESRDCYLNMYAVKKPDK 120

Query: 121 VDPNEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFGHIKGLKD 180
           VDPNEQRLSKWLNCALSNEPL EPCVID LGNIFNKESLV AL+ KKLPK FGHIKGLKD
Sbjct: 121 VDPNEQRLSKWLNCALSNEPLTEPCVIDKLGNIFNKESLVEALIGKKLPKEFGHIKGLKD 180

Query: 181 MIKINLSMIPGTESRGNEISEARFQCPITGLEFNGKYKFFALRACGHVLSAKALKEVKSS 240
           MIK++LS+IPG    GN  S ARFQCP+ GLEFNGKYKFFALR CGHVLSAKALKEVKSS
Sbjct: 181 MIKVHLSVIPGV---GNMGSGARFQCPVAGLEFNGKYKFFALRNCGHVLSAKALKEVKSS 240

Query: 241 SCLVCHAEFMDRDKFVINGSEEEVVRMRERMEEEKTK-AKEKKTKKVRTGEVGMNGDVSV 300
           +CLVCH+EF + DK  INGSEEEV  +RE+MEEEK K  KEKKTKKV+ G  G+NGD   
Sbjct: 241 TCLVCHSEFREGDKIPINGSEEEVAVLREKMEEEKAKTTKEKKTKKVKNGG-GVNGD--- 300

Query: 301 DLASSRLSGKKHGIEGKALGKISAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANA 360
           DL  SRLSG KHGI+ KA+ K SAK E +      ++    AS  A KRFKA+D+APANA
Sbjct: 301 DLEGSRLSGTKHGIDVKAVEKASAKVEANNNGKVSLKGVNDASAAAAKRFKASDLAPANA 360

Query: 361 TKEVYASIFTSSRKSDFKETYSCRSLPLGQN 387
           TKEVYASIFTSS+KSDFKETY+CRSLPLG+N
Sbjct: 361 TKEVYASIFTSSKKSDFKETYTCRSLPLGRN 378

The following BLAST results are available for this feature:

BLAST of CmaCh11G004740 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RTF2_RAT	3.1e-34	37.27	Protein RTF2 homolog OS=Rattus norvegicus GN=Rtfdc1 PE=2 SV=1	[more]
RTF2_MACFA	1.3e-32	41.33	Protein RTF2 homolog OS=Macaca fascicularis GN=RTFDC1 PE=2 SV=1	[more]
RTF2_MOUSE	1.7e-32	37.13	Protein RTF2 homolog OS=Mus musculus GN=Rtfdc1 PE=1 SV=1	[more]
RTF2_PONAB	8.4e-32	35.05	Protein RTF2 homolog OS=Pongo abelii GN=RTFDC1 PE=2 SV=1	[more]
RTF2_HUMAN	1.4e-31	34.71	Protein RTF2 homolog OS=Homo sapiens GN=RTFDC1 PE=1 SV=3	[more]

BLAST of CmaCh11G004740 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTI5_CUCSA	1.8e-182	86.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G269330 PE=4 SV=1	[more]
M5VW12_PRUPE	2.6e-133	65.37	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007127mg PE=4 SV=1	[more]
W9QY07_9ROSA	1.9e-131	66.58	Uncharacterized protein OS=Morus notabilis GN=L484_003302 PE=4 SV=1	[more]
F6HYI7_VITVI	6.3e-127	65.12	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00090 PE=4 SV=...	[more]
K7K9Q4_SOYBN	2.0e-125	65.45	Uncharacterized protein OS=Glycine max GN=GLYMA_02G202400 PE=4 SV=1	[more]

BLAST of CmaCh11G004740 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58020.1	4.1e-109	58.59	unknown protein	[more]

BLAST of CmaCh11G004740 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659086633\|ref\|XP_008444038.1\|	2.3e-183	86.60	PREDICTED: protein RTF2 homolog [Cucumis melo]	[more]
gi\|778660265\|ref\|XP_011655923.1\|	2.6e-182	86.08	PREDICTED: protein RTF2 homolog [Cucumis sativus]	[more]
gi\|1009109846\|ref\|XP_015892443.1\|	3.7e-136	69.31	PREDICTED: protein RTF2 homolog [Ziziphus jujuba]	[more]
gi\|1021473603\|ref\|XP_016200126.1\|	5.3e-135	69.82	PREDICTED: protein RTF2 homolog [Arachis ipaensis]	[more]
gi\|1012001716\|ref\|XP_015932787.1\|	1.3e-133	68.80	PREDICTED: protein RTF2 homolog [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000626	Ubiquitin_dom
IPR006735	Rtf2
IPR027799	Rtf2_RING-finger

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:1902979	mitotic DNA replication termination

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902979	mitotic DNA replication termination
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G004740.1	CmaCh11G004740.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin domain	PROFILE	PS50053	UBIQUITIN_2	coord: 9..90 score: 8
IPR006735	Replication termination factor 2	PANTHER	PTHR12775	PROTEIN C20ORF43 HOMOLOG	coord: 91..390 score: 1.3E
IPR027799	Replication termination factor 2, RING-finger	PFAM	PF04641	Rtf2	coord: 90..370 score: 9.3
None	No IPR available	unknown	Coil	Coil	coord: 253..284 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh11G004740	Cucsa.350920	Cucumber (Gy14) v1	cgycmaB0958
CmaCh11G004740	Cla018721	Watermelon (97103) v1	cmawmB143
CmaCh11G004740	Csa1G269330	Cucumber (Chinese Long) v2	cmacuB100
CmaCh11G004740	MELO3C010238	Melon (DHL92) v3.5.1	cmameB105
CmaCh11G004740	ClCG06G012260	Watermelon (Charleston Gray)	cmawcgB135
CmaCh11G004740	CSPI01G17510	Wild cucumber (PI 183967)	cmacpiB097
CmaCh11G004740	CmoCh11G004710	Cucurbita moschata (Rifu)	cmacmoB112
CmaCh11G004740	CmoCh10G005120	Cucurbita moschata (Rifu)	cmacmoB099
CmaCh11G004740	Cp4.1LG04g08840	Cucurbita pepo (Zucchini)	cmacpeB153
CmaCh11G004740	Cp4.1LG18g05470	Cucurbita pepo (Zucchini)	cmacpeB132
CmaCh11G004740	MELO3C010238.2	Melon (DHL92) v3.6.1	cmamedB112
CmaCh11G004740	CsaV3_1G028770	Cucumber (Chinese Long) v3	cmacucB0111
CmaCh11G004740	Cla97C06G121440	Watermelon (97103) v2	cmawmbB139
CmaCh11G004740	Bhi02G000707	Wax gourd	cmawgoB0150
CmaCh11G004740	CsGy1G017700	Cucumber (Gy14) v2	cgybcmaB039
CmaCh11G004740	Carg14097	Silver-seed gourd	carcmaB0710
CmaCh11G004740	Carg09983	Silver-seed gourd	carcmaB0169

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh11G004740	Cucurbita maxima (Rimu)	cmacmaB031
CmaCh11G004740	Cucurbita maxima (Rimu)	cmacmaB072
CmaCh11G004740	Cucurbita maxima (Rimu)	cmacmaB146
CmaCh11G004740	Cucumber (Gy14) v1	cgycmaB0753
CmaCh11G004740	Cucurbita moschata (Rifu)	cmacmoB097
CmaCh11G004740	Wild cucumber (PI 183967)	cmacpiB131
CmaCh11G004740	Cucumber (Chinese Long) v2	cmacuB134
CmaCh11G004740	Melon (DHL92) v3.5.1	cmameB143
CmaCh11G004740	Watermelon (Charleston Gray)	cmawcgB121
CmaCh11G004740	Watermelon (97103) v1	cmawmB108
CmaCh11G004740	Bottle gourd (USVL1VR-Ls)	cmalsiB120
CmaCh11G004740	Bottle gourd (USVL1VR-Ls)	cmalsiB131
CmaCh11G004740	Cucumber (Gy14) v2	cgybcmaB477
CmaCh11G004740	Melon (DHL92) v3.6.1	cmamedB155
CmaCh11G004740	Silver-seed gourd	carcmaB0891
CmaCh11G004740	Cucumber (Chinese Long) v3	cmacucB0152
CmaCh11G004740	Watermelon (97103) v2	cmawmbB124
CmaCh11G004740	Wax gourd	cmawgoB0148