CsGy1G017700 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G017700
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	protein RTF2 homolog
Location	Chr1 : 15863817 .. 15864977 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATCCGAAAAATCAACACCGTTTTCAGATCTTCCTTCAGTCTCCCGACCTACAGATTGAATCCAAAATCGTAAACCTACCACAAACACCGGCCAAAACCCTAGAGGACCTGAAGTTCTCTCTTCTCACTGAAATACTCGCTTCACGGATTGCATCATCTTTCTACTTTACCCTCAATGGGAAACCCCTTCTCGATTCCACTACGATTTCTCTAATTCCCCCTTTGTCCACCTTAATCTTAAGAACCAGGGTCCTTGGAGGTGGTGGCGATGGCGGTGCAACGGGGGCTGAGTCGCGTGACTGCTACCTTAATATGTACGCGGAGAAGAAACCCGATAAGGTCGATCCTAACGAGCAGAGGCTGTCCAAGTGGTTGAATTGCGCTCTTTCTAACGAGCCTTTGAGGGAACCTTGTGTGATTGATTGGCTTGGAAATGTCTTCAATAAGGAATCGCTTGTGCAGGCTTTGCTAGAGAAGAAGTTGCCAAAAGGATTCGGGCATATCAAGGGTCTGAAGGATATGATCAAGATAAATTTTTCGATGATTCCCGGTACAGAATCGCGTGGGAATGCTATTTCAGAGCCGCGGTACCAATGTCCAGTTACTGGTCTTGAGTTCAATGGTAAGTACAAGTTTTTCGCTCTGAGAACTTGTGGACATGTGTTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCTTCTTCCTGCCTTGTTTGTCATGCTGAGTTTGCGGAAAGAGATAAATTTGTGATTAATGGGAGCGAGGAGGAGGTAGAAGAAATGAGGGAGAGAATGGAGGAAGAGAAGTCTAAGTCGAAATCAAAGGAGAAGAAGACAAAGAAAGTAAGGAATGGGGAAGTGGGTATGAATGGAGATGTGAGTGTGGATTTGGCAATATCTCGTTTGTCTGGTAAAAAGCATGCTATTGAAGTTAAGTCTTTGGAGAAGGTTTCTGCTAAGCCTGAAAGGCAAGAGCGGCTAGATGGTGGAGCTCAGGTAAAGGATGCAACTAGTAATGGTGCCGTAAAGCGTTTTAAAGCAGCAGACATGGTCCCTGCCAATGCTACCAAAGAAGTTTATGCTTCAATATTCACCTCATCTAGGAAGTCAGATTTCAAGGAAACATATTCTTGTAGATCTCTTCCACTCGGTCGAAACTAA

mRNA sequence

ATGCATCCGAAAAATCAACACCGTTTTCAGATCTTCCTTCAGTCTCCCGACCTACAGATTGAATCCAAAATCGTAAACCTACCACAAACACCGGCCAAAACCCTAGAGGACCTGAAGTTCTCTCTTCTCACTGAAATACTCGCTTCACGGATTGCATCATCTTTCTACTTTACCCTCAATGGGAAACCCCTTCTCGATTCCACTACGATTTCTCTAATTCCCCCTTTGTCCACCTTAATCTTAAGAACCAGGGTCCTTGGAGGTGGTGGCGATGGCGGTGCAACGGGGGCTGAGTCGCGTGACTGCTACCTTAATATGTACGCGGAGAAGAAACCCGATAAGGTCGATCCTAACGAGCAGAGGCTGTCCAAGTGGTTGAATTGCGCTCTTTCTAACGAGCCTTTGAGGGAACCTTGTGTGATTGATTGGCTTGGAAATGTCTTCAATAAGGAATCGCTTGTGCAGGCTTTGCTAGAGAAGAAGTTGCCAAAAGGATTCGGGCATATCAAGGGTCTGAAGGATATGATCAAGATAAATTTTTCGATGATTCCCGGTACAGAATCGCGTGGGAATGCTATTTCAGAGCCGCGGTACCAATGTCCAGTTACTGGTCTTGAGTTCAATGGTAAGTACAAGTTTTTCGCTCTGAGAACTTGTGGACATGTGTTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCTTCTTCCTGCCTTGTTTGTCATGCTGAGTTTGCGGAAAGAGATAAATTTGTGATTAATGGGAGCGAGGAGGAGGTAGAAGAAATGAGGGAGAGAATGGAGGAAGAGAAGTCTAAGTCGAAATCAAAGGAGAAGAAGACAAAGAAAGTAAGGAATGGGGAAGTGGGTATGAATGGAGATGTGAGTGTGGATTTGGCAATATCTCGTTTGTCTGGTAAAAAGCATGCTATTGAAGTTAAGTCTTTGGAGAAGGTTTCTGCTAAGCCTGAAAGGCAAGAGCGGCTAGATGGTGGAGCTCAGGTAAAGGATGCAACTAGTAATGGTGCCGTAAAGCGTTTTAAAGCAGCAGACATGGTCCCTGCCAATGCTACCAAAGAAGTTTATGCTTCAATATTCACCTCATCTAGGAAGTCAGATTTCAAGGAAACATATTCTTGTAGATCTCTTCCACTCGGTCGAAACTAA

Coding sequence (CDS)

ATGCATCCGAAAAATCAACACCGTTTTCAGATCTTCCTTCAGTCTCCCGACCTACAGATTGAATCCAAAATCGTAAACCTACCACAAACACCGGCCAAAACCCTAGAGGACCTGAAGTTCTCTCTTCTCACTGAAATACTCGCTTCACGGATTGCATCATCTTTCTACTTTACCCTCAATGGGAAACCCCTTCTCGATTCCACTACGATTTCTCTAATTCCCCCTTTGTCCACCTTAATCTTAAGAACCAGGGTCCTTGGAGGTGGTGGCGATGGCGGTGCAACGGGGGCTGAGTCGCGTGACTGCTACCTTAATATGTACGCGGAGAAGAAACCCGATAAGGTCGATCCTAACGAGCAGAGGCTGTCCAAGTGGTTGAATTGCGCTCTTTCTAACGAGCCTTTGAGGGAACCTTGTGTGATTGATTGGCTTGGAAATGTCTTCAATAAGGAATCGCTTGTGCAGGCTTTGCTAGAGAAGAAGTTGCCAAAAGGATTCGGGCATATCAAGGGTCTGAAGGATATGATCAAGATAAATTTTTCGATGATTCCCGGTACAGAATCGCGTGGGAATGCTATTTCAGAGCCGCGGTACCAATGTCCAGTTACTGGTCTTGAGTTCAATGGTAAGTACAAGTTTTTCGCTCTGAGAACTTGTGGACATGTGTTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCTTCTTCCTGCCTTGTTTGTCATGCTGAGTTTGCGGAAAGAGATAAATTTGTGATTAATGGGAGCGAGGAGGAGGTAGAAGAAATGAGGGAGAGAATGGAGGAAGAGAAGTCTAAGTCGAAATCAAAGGAGAAGAAGACAAAGAAAGTAAGGAATGGGGAAGTGGGTATGAATGGAGATGTGAGTGTGGATTTGGCAATATCTCGTTTGTCTGGTAAAAAGCATGCTATTGAAGTTAAGTCTTTGGAGAAGGTTTCTGCTAAGCCTGAAAGGCAAGAGCGGCTAGATGGTGGAGCTCAGGTAAAGGATGCAACTAGTAATGGTGCCGTAAAGCGTTTTAAAGCAGCAGACATGGTCCCTGCCAATGCTACCAAAGAAGTTTATGCTTCAATATTCACCTCATCTAGGAAGTCAGATTTCAAGGAAACATATTCTTGTAGATCTCTTCCACTCGGTCGAAACTAA

Protein sequence

MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLNGKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINFSMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLAISRLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKEVYASIFTSSRKSDFKETYSCRSLPLGRN

Homology

[Close]

BLAST of CsGy1G017700 vs. NCBI nr
Match: XP_011655923.1 (PREDICTED: protein RTF2 homolog [Cucumis sativus] >KGN65240.1 hypothetical protein Csa_1G269330 [Cucumis sativus])

HSP 1 Score: 712.2 bits (1837), Expect = 9.4e-202
Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 0


Query: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60
           MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN
Sbjct: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60

Query: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120
           GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ
Sbjct: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120

Query: 121 RLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180
           RLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF
Sbjct: 121 RLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180

Query: 181 SMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240
           SMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH
Sbjct: 181 SMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240

Query: 241 AEFAERDKFVINGSEEEVXXXXXXXXXXXXXXXXXXXXXXXVRNGEVGMNGDVSVDLAIS 300
           AEFAERDKFVINGSEEEVXXXXXXXXXXXXXXXXXXXXXXXVRNGEVGMNGDVSVDLAIS
Sbjct: 241 AEFAERDKFVINGSEEEVXXXXXXXXXXXXXXXXXXXXXXXVRNGEVGMNGDVSVDLAIS 300

Query: 301 RLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKEVY 360
           RLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKEVY
Sbjct: 301 RLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CsGy1G017700 vs. NCBI nr
Match: XP_008444038.1 (PREDICTED: protein RTF2 homolog [Cucumis melo])

HSP 1 Score: 671.4 bits (1731), Expect = 1.8e-189
Identity = 362/386 (93.78%), Postives = 373/386 (96.63%), Query Frame = 0


Query: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60
           MHPKNQHR QIFL SPDLQI+SKIV+LPQT AKTLEDLKFSLL+E LASR+ASS YFTLN
Sbjct: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60

Query: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120
           GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ
Sbjct: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120

Query: 121 RLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180
           RLSKWLNCALSNEPL EPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF
Sbjct: 121 RLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180

Query: 181 SMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240
           SMIPGTESRGNAISEPR+QCP+TGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH
Sbjct: 181 SMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240

Query: 241 AEFAERDKFVINGSEEEVXXXXXXXXXXXXXXXXXXXXXXXVRNGEVGMNGDVSVDLAIS 300
            EF ERDKFVINGSEEEVXXXXXXXXXXXXXXXXXXXXXXXVRNGEVGMNGDV++DLA S
Sbjct: 241 TEFTERDKFVINGSEEEVXXXXXXXXXXXXXXXXXXXXXXXVRNGEVGMNGDVTMDLATS 300

Query: 301 RLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKEVY 360
           RLSGKKH IE+++LEKVSAKPER ERLDGGAQVK A SNGAVKRFKAADMVPANATKEVY
Sbjct: 301 RLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CsGy1G017700 vs. NCBI nr
Match: XP_022933589.1 (protein RTF2 homolog [Cucurbita moschata])

HSP 1 Score: 619.4 bits (1596), Expect = 8.3e-174
Identity = 332/388 (85.57%), Postives = 347/388 (89.43%), Query Frame = 0


Query: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60
           M+PKNQHR Q F+ SPDLQI+SKIVNL QT A++L DLK SL+    ASR+ASSFYFTLN
Sbjct: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60

Query: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLLDS TI  SL+PPLSTLILRTRVLGGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGN+FNKE LV ALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NFSMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N SM+PGTESRGNAISE R+QCP+TGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFAERDKFVINGSEEEVXXXXXXXXXXXXXXXXXXXXXXXVRNGEVGMNGDVSVDLA 300
           CHAEF +RDKFVINGSEEEV         XXXXXXXXXXXXXXVR GEVGMNGDVSVDLA
Sbjct: 241 CHAEFMDRDKFVINGSEEEV--VRMRERMXXXXXXXXXXXXXXVRTGEVGMNGDVSVDLA 300

Query: 301 ISRLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKE 360
            SRLSGKKH IE K+L KVSAKPE+ ER D G QVK A SNGAVKRFKAADM PANATKE
Sbjct: 301 SSRLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 387
           VYASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CsGy1G017700 vs. NCBI nr
Match: XP_023005959.1 (protein RTF2 homolog isoform X1 [Cucurbita maxima] >XP_023005964.1 protein RTF2 homolog isoform X2 [Cucurbita maxima] >XP_023005967.1 protein RTF2 homolog isoform X3 [Cucurbita maxima])

HSP 1 Score: 618.6 bits (1594), Expect = 1.4e-173
Identity = 329/388 (84.79%), Postives = 344/388 (88.66%), Query Frame = 0


Query: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60
           M+PKNQHR Q F++SPDLQI+SKIVNL QT A++L DLK SLL    ASR+ASSFYFTLN
Sbjct: 1   MYPKNQHRLQFFVRSPDLQIQSKIVNLAQTSAQSLADLKLSLLLNAPASRLASSFYFTLN 60

Query: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLLDS TI  SL+PPLSTLILRTRVLGGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGN+FNKESLV ALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NFSMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N SMIPGTESRGN ISE R+QCP+TGLEFNGKYKFFALR CGHVLSAKALKEVKSSSCLV
Sbjct: 181 NLSMIPGTESRGNEISEARFQCPITGLEFNGKYKFFALRACGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFAERDKFVINGSEEEVXXXXXXXXXXXXXXXXXXXXXXXVRNGEVGMNGDVSVDLA 300
           CHAEF +RDKFVINGSEEEV           XXXXXXXXXXX VR GEVGMNGDVSVDLA
Sbjct: 241 CHAEFMDRDKFVINGSEEEV--VRMRERMEEXXXXXXXXXXXKVRTGEVGMNGDVSVDLA 300

Query: 301 ISRLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKE 360
            SRLSGKKH IE K+L K+SAKPE+ ER D G QVK A SNGAVKRFKAADM PANATKE
Sbjct: 301 SSRLSGKKHGIEGKALGKISAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 387
           VYASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CsGy1G017700 vs. NCBI nr
Match: XP_022135450.1 (protein RTF2 homolog [Momordica charantia])

HSP 1 Score: 614.0 bits (1582), Expect = 3.5e-172
Identity = 323/388 (83.25%), Postives = 338/388 (87.11%), Query Frame = 0


Query: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60
           MHPKNQ R QIF+ SPDLQI+SKI+NL +T A+TLEDLKFSLL + LA R ASSFYFTLN
Sbjct: 1   MHPKNQQRLQIFVHSPDLQIQSKILNLARTSAQTLEDLKFSLLPQTLAPRSASSFYFTLN 60

Query: 61  GKPLLDST--TISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLLDST  T SLI PLSTLILRTR+ GGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTPVTSSLISPLSTLILRTRIHGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGH+KGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHVKGLKDMIKI 180

Query: 181 NFSMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           + S IPGTES  NAIS PR+QCP+TGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 SLSAIPGTESGSNAISGPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFAERDKFVINGSEEEVXXXXXXXXXXXXXXXXXXXXXXXVRNGEVGMNGDVSVDLA 300
           CHAEF +RDK VINGSEEEV              XXXXX    V+NGEVGMNGDVSVDLA
Sbjct: 241 CHAEFKDRDKLVINGSEEEV--AVLRERMEEEKSXXXXXRLKKVKNGEVGMNGDVSVDLA 300

Query: 301 ISRLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKE 360
            SRLSGKKH IEVK+ EKVSAK ER ER DGG QVK A +NGAVKRFKAADM P NATKE
Sbjct: 301 SSRLSGKKHGIEVKASEKVSAKLERNERPDGGIQVKVAANNGAVKRFKAADMAPPNATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 387
           VYASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CsGy1G017700 vs. TAIR10
Match: AT5G58020.1 (unknown protein)

HSP 1 Score: 370.5 bits (950), Expect = 1.2e-102
Identity = 218/393 (55.47%), Postives = 255/393 (64.89%), Query Frame = 0


Query: 8   RFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSF---YFTLNGKPL 67
           R QIF++SPD Q   K+V L   PA++L  L  S +T +L S    SF     TL+GK L
Sbjct: 4   RRQIFVKSPDCQ---KVVALQLDPAQSL--LTLSGITSLLESSQRISFSACSITLDGKLL 63

Query: 68  LDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRL 127
             ST I  S +P +S L L  R+ GGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRL
Sbjct: 64  NGSTRIQVSKLPSVSMLTLFPRLRGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRL 123

Query: 128 SKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINFSM 187
           SKWLNCALSNEPL EPCVID LGN+FNKE LV ALL K+LPK F +IKGLKDM+ I  + 
Sbjct: 124 SKWLNCALSNEPLAEPCVIDLLGNLFNKEVLVHALLSKRLPKQFSYIKGLKDMVNIKLTP 183

Query: 188 IPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHAE 247
           + G++      +  ++QCPV+GLEFNGKYKFFALR CGHV+SAKALKEVKSSSCLVCHA+
Sbjct: 184 VAGSDGSSQDTTSAQFQCPVSGLEFNGKYKFFALRGCGHVMSAKALKEVKSSSCLVCHAD 243

Query: 248 FAERDKFVINGSEEEVXXXXXXXXXXXXXXXXXXXXXXXVRNGEVGMNGDVSVDLAISRL 307
             + DK VING+EEE                                     VDL   R+
Sbjct: 244 VKDSDKIVINGTEEE-------------------------------------VDLLRERM 303

Query: 308 SGKKHAIEVKSLEKVSAKPERQERLDGGA-----QVKDATSNG---AVKRFKAADMVPAN 367
             +K  +  K      +K       D GA     Q++D   NG    VK+FKAAD VP N
Sbjct: 304 EEEKAKLREKKGVSKKSKNGAAVVADTGAKVAKRQIEDGNVNGNGITVKKFKAADKVPVN 354

Query: 368 ATKEVYASIFTSS-RKSDFKETYSCRSLPLGRN 387
           ATKEVYAS+FTSS +KSDF+ETYSCRSLPLGRN
Sbjct: 364 ATKEVYASLFTSSKKKSDFRETYSCRSLPLGRN 354

[Close]

BLAST of CsGy1G017700 vs. Swiss-Prot
Match: sp|Q5R9P9|RTF2_PONAB (Protein RTF2 homolog OS=Pongo abelii OX=9601 GN=RTFDC1 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 6.1e-27
Identity = 64/161 (39.75%), Postives = 96/161 (59.63%), Query Frame = 0


Query: 110 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 169
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 170 --HIKGLKDMIKINFSMIPGTE-SRGNA-------ISEPRYQCPVTGLEFNGKYKFFALR 229
             HIK +K++ ++  S  P  E  +GN        +   R+ CPV GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 230 TCGHVLSAKALKEVKSSSCLVCHAEFAERDKFVINGSEEEV 259
            CG V S +ALKE+K+  C  C A F E D  V+NG++E+V
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDV 179

[Close]

BLAST of CsGy1G017700 vs. Swiss-Prot
Match: sp|Q0VCR1|RTF2_BOVIN (Protein RTF2 homolog OS=Bos taurus OX=9913 GN=RTFDC1 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 8.0e-27
Identity = 64/161 (39.75%), Postives = 96/161 (59.63%), Query Frame = 0


Query: 110 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 169
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSSEKALGKA 78

Query: 170 --HIKGLKDMIKINFSMIPGTE-SRGNA-------ISEPRYQCPVTGLEFNGKYKFFALR 229
             HIK +K++ ++  S  P  E  +GN        +   R+ CPV GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELRLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 230 TCGHVLSAKALKEVKSSSCLVCHAEFAERDKFVINGSEEEV 259
            CG V S +ALKE+K+  C  C A F E D  V+NG++E+V
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDV 179

[Close]

BLAST of CsGy1G017700 vs. Swiss-Prot
Match: sp|Q4R594|RTF2_MACFA (Protein RTF2 homolog OS=Macaca fascicularis OX=9541 GN=RTFDC1 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 8.0e-27
Identity = 64/161 (39.75%), Postives = 95/161 (59.01%), Query Frame = 0


Query: 110 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 169
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 170 --HIKGLKDMIKINFSMIPGTE-SRGNA-------ISEPRYQCPVTGLEFNGKYKFFALR 229
             HIK +K++ ++  S  P  E  +GN        +   R+ CPV GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 230 TCGHVLSAKALKEVKSSSCLVCHAEFAERDKFVINGSEEEV 259
            CG V S +ALKE+K+  C  C A F E D  V+NG+ E+V
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTNEDV 179

[Close]

BLAST of CsGy1G017700 vs. Swiss-Prot
Match: sp|Q9BY42|RTF2_HUMAN (Protein RTF2 homolog OS=Homo sapiens OX=9606 GN=RTFDC1 PE=1 SV=3)

HSP 1 Score: 122.1 bits (305), Expect = 1.4e-26
Identity = 63/161 (39.13%), Postives = 96/161 (59.63%), Query Frame = 0


Query: 110 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 169
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 170 --HIKGLKDMIKINFSMIPGTE-SRGNA-------ISEPRYQCPVTGLEFNGKYKFFALR 229
             HIK +K++ ++  S  P  E  +GN        +   R+ CPV GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 230 TCGHVLSAKALKEVKSSSCLVCHAEFAERDKFVINGSEEEV 259
            CG V S +ALKE+K+  C  C A F E D  ++NG++E+V
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIMLNGTKEDV 179

[Close]

BLAST of CsGy1G017700 vs. Swiss-Prot
Match: sp|A5GFW7|RTF2_PIG (Protein RTF2 homolog OS=Sus scrofa OX=9823 GN=RTFDC1 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.3e-26
Identity = 62/161 (38.51%), Postives = 95/161 (59.01%), Query Frame = 0


Query: 110 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 169
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSSEKALGKA 78

Query: 170 --HIKGLKDMIKINFSMIPGTE--------SRGNAISEPRYQCPVTGLEFNGKYKFFALR 229
             HIK +K++ ++  S  P  E         + + +   R+ CPV GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELRLSDNPAWEGDKGSTKGDKHDDLQRARFICPVVGLEMNGRHRFCYLR 138

Query: 230 TCGHVLSAKALKEVKSSSCLVCHAEFAERDKFVINGSEEEV 259
            CG V S +ALKE+K+  C  C A F E D  V+NG++E+V
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDV 179

[Close]

BLAST of CsGy1G017700 vs. TrEMBL
Match: tr|A0A0A0LTI5|A0A0A0LTI5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G269330 PE=4 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 6.2e-202
Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 0


Query: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60
           MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN
Sbjct: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60

Query: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120
           GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ
Sbjct: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120

Query: 121 RLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180
           RLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF
Sbjct: 121 RLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180

Query: 181 SMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240
           SMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH
Sbjct: 181 SMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240

Query: 241 AEFAERDKFVINGSEEEVXXXXXXXXXXXXXXXXXXXXXXXVRNGEVGMNGDVSVDLAIS 300
           AEFAERDKFVINGSEEEVXXXXXXXXXXXXXXXXXXXXXXXVRNGEVGMNGDVSVDLAIS
Sbjct: 241 AEFAERDKFVINGSEEEVXXXXXXXXXXXXXXXXXXXXXXXVRNGEVGMNGDVSVDLAIS 300

Query: 301 RLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKEVY 360
           RLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKEVY
Sbjct: 301 RLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CsGy1G017700 vs. TrEMBL
Match: tr|A0A1S3B9F3|A0A1S3B9F3_CUCME (protein RTF2 homolog OS=Cucumis melo OX=3656 GN=LOC103487489 PE=4 SV=1)

HSP 1 Score: 671.4 bits (1731), Expect = 1.2e-189
Identity = 362/386 (93.78%), Postives = 373/386 (96.63%), Query Frame = 0


Query: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60
           MHPKNQHR QIFL SPDLQI+SKIV+LPQT AKTLEDLKFSLL+E LASR+ASS YFTLN
Sbjct: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60

Query: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120
           GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ
Sbjct: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120

Query: 121 RLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180
           RLSKWLNCALSNEPL EPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF
Sbjct: 121 RLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180

Query: 181 SMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240
           SMIPGTESRGNAISEPR+QCP+TGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH
Sbjct: 181 SMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240

Query: 241 AEFAERDKFVINGSEEEVXXXXXXXXXXXXXXXXXXXXXXXVRNGEVGMNGDVSVDLAIS 300
            EF ERDKFVINGSEEEVXXXXXXXXXXXXXXXXXXXXXXXVRNGEVGMNGDV++DLA S
Sbjct: 241 TEFTERDKFVINGSEEEVXXXXXXXXXXXXXXXXXXXXXXXVRNGEVGMNGDVTMDLATS 300

Query: 301 RLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKEVY 360
           RLSGKKH IE+++LEKVSAKPER ERLDGGAQVK A SNGAVKRFKAADMVPANATKEVY
Sbjct: 301 RLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CsGy1G017700 vs. TrEMBL
Match: tr|M5VW12|M5VW12_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G260500 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 9.8e-131
Identity = 250/389 (64.27%), Postives = 288/389 (74.04%), Query Frame = 0


Query: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60
           MHPK  H FQIFLQSPDLQI ++ + L  T   TL  LK S+ +  L      S YFTLN
Sbjct: 1   MHPK-LHNFQIFLQSPDLQIPTQTITLAPTQTPTLRHLKLSIFSHTL-----PSLYFTLN 60

Query: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPL DST +  S I PLSTL+LR R  GGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLNDSTPLLDSQITPLSTLVLRIRACGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNC+LSNEPL+EPCV+D+LGNVFNKE LV+ALL KK+PK FGHIKGLKDMI +
Sbjct: 121 EQRLSKWLNCSLSNEPLKEPCVVDFLGNVFNKEPLVEALLGKKVPKAFGHIKGLKDMITV 180

Query: 181 NFSMIPGTES-RGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCL 240
           +FS IPGTES R ++ + PR+QCP++G+EFNGK KF AL+TCGHVLSAKALKEVKSS+CL
Sbjct: 181 HFSPIPGTESNRRSSAAGPRFQCPISGVEFNGKCKFLALKTCGHVLSAKALKEVKSSTCL 240

Query: 241 VCHAEFAERDKFVINGSEEEVXXXXXXXXXXXXXXXXXXXXXXXVRNGEVGMNGDVSVDL 300
           VCHA F+E DK VING+EEEV                        +NG+  +NG+  +  
Sbjct: 241 VCHAGFSEADKIVINGNEEEV--AALRDRMEAEKAKGRVKKMKKTKNGDATLNGEEGMGF 300

Query: 301 AISRLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATK 360
             SRLSG KH I+VK++EK SA  E   ++  G       SNGA KRFKA D+ P NATK
Sbjct: 301 EASRLSGTKHGIDVKAVEKASANVEVHGKVVNGGDNVKGVSNGAAKRFKAVDIAPPNATK 360

Query: 361 EVYASIFTSSRKSDFKETYSCRSLPLGRN 387
           EVYASIFTSSRKS+FKETYSCRSLPLGRN
Sbjct: 361 EVYASIFTSSRKSEFKETYSCRSLPLGRN 381

[Close]

BLAST of CsGy1G017700 vs. TrEMBL
Match: tr|A0A2P4JZ66|A0A2P4JZ66_QUESU (Protein rtf2 like OS=Quercus suber OX=58331 GN=CFP56_02414 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 2.9e-130
Identity = 258/379 (68.07%), Postives = 288/379 (75.99%), Query Frame = 0


Query: 10  QIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLNGKPLLDSTT 69
           QIF+QS D QI +K + L  TP +TL  LK SL    L+++  SSFYFTLNGK L DST 
Sbjct: 4   QIFVQSLDPQIPTKTLTLTPTPNQTLHHLKLSL----LSTQSLSSFYFTLNGKTLPDSTP 63

Query: 70  ISL--IPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKWLN 129
           + +  I PLSTLIL  R+ GGGGDGGATGAESRDCYL+MY EKKPDKVDPNEQRLSKW N
Sbjct: 64  LQVPQIAPLSTLILHPRLPGGGGDGGATGAESRDCYLHMYDEKKPDKVDPNEQRLSKWSN 123

Query: 130 CALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINFSMIPGTE 189
           CALSNEPLREPCVID LGNVFNKE+LV+ALL KKLPK FGH+KGLKDMI +  SMIPG E
Sbjct: 124 CALSNEPLREPCVIDKLGNVFNKEALVEALLGKKLPKAFGHVKGLKDMITVKLSMIPGAE 183

Query: 190 SRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHAEFAERD 249
              N     R++CP+TGL FNGKYKFFALR CGHVLSAKALKEVKSSSCLVCH EF E D
Sbjct: 184 LDENVHDGTRFECPITGLAFNGKYKFFALRNCGHVLSAKALKEVKSSSCLVCHEEFKESD 243

Query: 250 KFVINGSEEEVXXXXXXXXXXXXXXXXXXXXXXXVRNGEVGMNGDVSVDLAISRLSGKKH 309
           K VINGSEEEV                XXXXXX V+NGE+G+NG+  + L   RLSGKKH
Sbjct: 244 KLVINGSEEEV--AVLRERMEEEKTKMXXXXXXKVKNGEMGVNGEEGIGLEAPRLSGKKH 303

Query: 310 AIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKEVYASIFTSS 369
            I+VK++EKVS K E   ++  G        NGAVKRFKA D+ PANATKEVYASIFTSS
Sbjct: 304 GIDVKAVEKVSGKVEGNGKVVNGEVGVKGVGNGAVKRFKAVDLAPANATKEVYASIFTSS 363

Query: 370 RKSDFKETYSCRSLPLGRN 387
           RKS+FKETYSCRSLPLGRN
Sbjct: 364 RKSNFKETYSCRSLPLGRN 376

[Close]

BLAST of CsGy1G017700 vs. TrEMBL
Match: tr|A0A2P5F3C9|A0A2P5F3C9_9ROSA (Zinc finger, RING/FYVE/PHD-type domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_119320 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 5.4e-129
Identity = 254/393 (64.63%), Postives = 287/393 (73.03%), Query Frame = 0


Query: 4   KNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLNGKP 63
           +   R Q+ +Q PDLQI SK + L  + ++TL  LK SL  E  +S   SSFYFTLNGKP
Sbjct: 5   RESRRLQVIVQFPDLQIPSKTLILTPSESQTLHHLKRSLFAEPFSSEALSSFYFTLNGKP 64

Query: 64  LLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQR 123
           L DS+ I  S I PLSTLILR+R  GGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQR
Sbjct: 65  LDDSSPILSSRIAPLSTLILRSRARGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQR 124

Query: 124 LSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINFS 183
           LSKWLNCALSNEPL+EPCV+DWLGNVFNKE+LV+ALL KK+PK FGHIKGLKDMIKI  S
Sbjct: 125 LSKWLNCALSNEPLKEPCVVDWLGNVFNKEALVEALLGKKIPKAFGHIKGLKDMIKIELS 184

Query: 184 MIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHA 243
            IPGTE  G+  S  R+QCP+TGLEFNGKYKFFAL+ CGHVLSAKALKEVKSSSCLVCHA
Sbjct: 185 SIPGTEGDGDLRSGARFQCPITGLEFNGKYKFFALKNCGHVLSAKALKEVKSSSCLVCHA 244

Query: 244 EFAERDKFVINGSEEEVXXXXXXXXXXXXXXXXXXXXXXXVRNGEV--GMNGDVSVDLA- 303
           EF E DK VING++EEV                       V+NG+V    NG+V V    
Sbjct: 245 EFTETDKIVINGNDEEV--LVLRERMEAEKGKLREKRAKKVKNGDVAAAANGEVGVGSGS 304

Query: 304 -ISRLSGKKHAI-EVKSLEKVSAKPER---QERLDGGAQVKDATSNGAVKRFKAADMVPA 363
             +RLSG KH I +VK+  KVS+       +   +G    K  ++N A KRFKA D+ P 
Sbjct: 305 DSARLSGTKHGISDVKAELKVSSNGNGKAVKAASNGAVSAKSLSNNAAAKRFKATDIAPP 364

Query: 364 NATKEVYASIFTSSRKSDFKETYSCRSLPLGRN 387
           NA KEVYASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 365 NANKEVYASIFTSSRKSDFKETYSCRSLPLGRN 395

The following BLAST results are available for this feature:

BLAST of CsGy1G017700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655923.1	9.4e-202	100.00	PREDICTED: protein RTF2 homolog [Cucumis sativus] >KGN65240.1 hypothetical prote...	[more]
XP_008444038.1	1.8e-189	93.78	PREDICTED: protein RTF2 homolog [Cucumis melo]	[more]
XP_022933589.1	8.3e-174	85.57	protein RTF2 homolog [Cucurbita moschata]	[more]
XP_023005959.1	1.4e-173	84.79	protein RTF2 homolog isoform X1 [Cucurbita maxima] >XP_023005964.1 protein RTF2 ...	[more]
XP_022135450.1	3.5e-172	83.25	protein RTF2 homolog [Momordica charantia]	[more]

BLAST of CsGy1G017700 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58020.1	1.2e-102	55.47	unknown protein	[more]

BLAST of CsGy1G017700 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5R9P9\|RTF2_PONAB	6.1e-27	39.75	Protein RTF2 homolog OS=Pongo abelii OX=9601 GN=RTFDC1 PE=2 SV=1	[more]
sp\|Q0VCR1\|RTF2_BOVIN	8.0e-27	39.75	Protein RTF2 homolog OS=Bos taurus OX=9913 GN=RTFDC1 PE=2 SV=1	[more]
sp\|Q4R594\|RTF2_MACFA	8.0e-27	39.75	Protein RTF2 homolog OS=Macaca fascicularis OX=9541 GN=RTFDC1 PE=2 SV=1	[more]
sp\|Q9BY42\|RTF2_HUMAN	1.4e-26	39.13	Protein RTF2 homolog OS=Homo sapiens OX=9606 GN=RTFDC1 PE=1 SV=3	[more]
sp\|A5GFW7\|RTF2_PIG	2.3e-26	38.51	Protein RTF2 homolog OS=Sus scrofa OX=9823 GN=RTFDC1 PE=3 SV=1	[more]

BLAST of CsGy1G017700 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LTI5\|A0A0A0LTI5_CUCSA	6.2e-202	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G269330 PE=4 SV=1	[more]
tr\|A0A1S3B9F3\|A0A1S3B9F3_CUCME	1.2e-189	93.78	protein RTF2 homolog OS=Cucumis melo OX=3656 GN=LOC103487489 PE=4 SV=1	[more]
tr\|M5VW12\|M5VW12_PRUPE	9.8e-131	64.27	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G260500 PE=4 SV=1	[more]
tr\|A0A2P4JZ66\|A0A2P4JZ66_QUESU	2.9e-130	68.07	Protein rtf2 like OS=Quercus suber OX=58331 GN=CFP56_02414 PE=4 SV=1	[more]
tr\|A0A2P5F3C9\|A0A2P5F3C9_9ROSA	5.4e-129	64.63	Zinc finger, RING/FYVE/PHD-type domain containing protein OS=Trema orientalis OX...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:1902979	mitotic DNA replication termination

Vocabulary: **INTERPRO**
Term	Definition
IPR006735	Rtf2
IPR027799	Rtf2_RING-finger

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902979	mitotic DNA replication termination
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G017700.1	CsGy1G017700.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 251..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..339
None	No IPR available	CDD	cd16653	RING-like_Rtf2	coord: 198..243 e-value: 4.08952E-26 score: 98.0819
IPR027799	Replication termination factor 2, RING-finger	PFAM	PF04641	Rtf2	coord: 88..370 e-value: 1.0E-73 score: 247.8
IPR006735	Replication termination factor 2	PANTHER	PTHR12775	PROTEIN C20ORF43 HOMOLOG	coord: 87..385

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G017700	Cla018721	Watermelon (97103) v1	cgybwmB079
CsGy1G017700	Csa1G269330	Cucumber (Chinese Long) v2	cgybcuB003
CsGy1G017700	MELO3C010238	Melon (DHL92) v3.5.1	cgybmeB049
CsGy1G017700	ClCG06G012260	Watermelon (Charleston Gray)	cgybwcgB063
CsGy1G017700	CSPI01G17510	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G017700	CmaCh11G004740	Cucurbita maxima (Rimu)	cgybcmaB039
CsGy1G017700	CmoCh10G005120	Cucurbita moschata (Rifu)	cgybcmoB014
CsGy1G017700	CmoCh11G004710	Cucurbita moschata (Rifu)	cgybcmoB037
CsGy1G017700	Cp4.1LG18g05470	Cucurbita pepo (Zucchini)	cgybcpeB040
CsGy1G017700	Cp4.1LG04g08840	Cucurbita pepo (Zucchini)	cgybcpeB109
CsGy1G017700	MELO3C010238.2	Melon (DHL92) v3.6.1	cgybmedB045
CsGy1G017700	CsaV3_1G028770	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G017700	Bhi02G000707	Wax gourd	cgybwgoB093
CsGy1G017700	Carg09983	Silver-seed gourd	carcgybB0132
CsGy1G017700	Carg14097	Silver-seed gourd	carcgybB0508

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G017700	Cucumber (Gy14) v2	cgybcgybB026
CsGy1G017700	Cucurbita maxima (Rimu)	cgybcmaB003
CsGy1G017700	Cucurbita maxima (Rimu)	cgybcmaB014
CsGy1G017700	Cucurbita maxima (Rimu)	cgybcmaB109
CsGy1G017700	Cucurbita moschata (Rifu)	cgybcmoB004
CsGy1G017700	Cucurbita pepo (Zucchini)	cgybcpeB104
CsGy1G017700	Cucurbita pepo (Zucchini)	cgybcpeB141
CsGy1G017700	Cucumber (Chinese Long) v2	cgybcuB030
CsGy1G017700	Bottle gourd (USVL1VR-Ls)	cgyblsiB051
CsGy1G017700	Bottle gourd (USVL1VR-Ls)	cgyblsiB060
CsGy1G017700	Bottle gourd (USVL1VR-Ls)	cgyblsiB071
CsGy1G017700	Melon (DHL92) v3.5.1	cgybmeB072
CsGy1G017700	Melon (DHL92) v3.6.1	cgybmedB068
CsGy1G017700	Watermelon (Charleston Gray)	cgybwcgB061
CsGy1G017700	Watermelon (97103) v1	cgybwmB039
CsGy1G017700	Wild cucumber (PI 183967)	cgybcpiB027
CsGy1G017700	Cucumber (Chinese Long) v3	cgybcucB035
CsGy1G017700	Watermelon (97103) v2	cgybwmbB060
CsGy1G017700	Watermelon (97103) v2	cgybwmbB063
CsGy1G017700	Wax gourd	cgybwgoB072