Csa1G269330 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G269330
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionProtein RTF2 homolog; contains IPR006735 (Protein of unknown function DUF602)
LocationChr1 : 13032846 .. 13034589 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGTTTTCTCCCAATTCATTTTGTAACGTTCGTCGCTGAGGCATTCGCTTCCACCGCACGTCCGCCCGGTCTGCTCGGCGCTTCGATCATCTTGCAGTCGCAAAATTCTCCTACTGGTTTTGTTCGAAACCCTATTTACAGATTTCAGCAGTAATCGTCGTTATTTTGATCTCGCAAAACTGTACCCACTGAATTTCGTCATCCCTTTTCGATTCTCGAAACCCTAAGTAATGCATCCGAAAAATCAACACCGTTTTCAGATCTTCCTTCAGTCTCCCGACCTACAGATTGAATCCAAAATCGTAAACCTACCACAAACACCGGCCAAAACCCTAGAGGACCTGAAGTTCTCTCTTCTCACTGAAATACTCGCTTCACGGATTGCATCATCTTTCTACTTTACCCTCAATGGGAAACCCCTTCTCGATTCCACTACGATTTCTCTAATTCCCCCTTTGTCCACCTTAATCTTAAGAACCAGGGTCCTTGGAGGTGGTGGCGATGGCGGTGCAACGGGGGCTGAGTCGCGTGACTGCTACCTTAATATGTACGCGGAGAAGAAACCCGATAAGGTCGATCCTAACGAGCAGAGGCTGTCCAAGTGGTTGAATTGCGCTCTTTCTAACGAGCCTTTGAGGGAACCTTGTGTGATTGATTGGCTTGGAAATGTCTTCAATAAGGAATCGCTTGTGCAGGCTTTGCTAGAGAAGAAGTTGCCAAAAGGATTCGGGCATATCAAGGGTCTGAAGGATATGATCAAGATAAATTTTTCGATGATTCCCGGTACAGAATCGCGTGGGAATGCTATTTCAGAGCCGCGGTACCAATGTCCAGTTACTGGTCTTGAGTTCAATGGTAAGTACAAGTTTTTCGCTCTGAGAACTTGTGGACATGTGTTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCTTCTTCCTGCCTTGTTTGTCATGCTGAGTTTGCGGAAAGAGATAAATTTGTGATTAATGGGAGCGAGGAGGAGGTAGAAGAAATGAGGGAGAGAATGGAGGAAGAGAAGTCTAAGTCGAAATCAAAGGAGAAGAAGACAAAGAAAGTAAGGAATGGGGAAGTGGGTATGAATGGAGATGTGAGTGTGGATTTGGCAATATCTCGTTTGTCTGGTAAAAAGCATGCTATTGAAGTTAAGTCTTTGGAGAAGGTTTCTGCTAAGCCTGAAAGGCAAGAGCGGCTAGATGGTGGAGCTCAGGTAAAGGATGCAACTAGTAATGGTGCCGTAAAGCGTTTTAAAGCAGCAGACATGGTCCCTGCCAATGCTACCAAAGAAGTTTATGCTTCAATATTCACCTCATCTAGGAAGTCAGATTTCAAGGAAACATATTCTTGTAGATCTCTTCCACTCGGTCGAAACTAATTGGTGATAAGAACTGCTTACATGGGTTTGTGGCAATTCTTCTATTATTGTTTGTATTCAAACCTTCATTTTCAGAGTCCTTCTGTGTTTATTGATTCATGTTTCATAGTTTCTTATTAATGTAATATGTTAGTTTACACTTTACAGTCACCAACTGCTTTTACTCTGTTGTGCTGTTTTACATTTGTAGATGAGTTAATATTGATGAAACTCCTGTGCTGATCTAATCCATTAGCCTCTAACAGTACAACGTTTTGAGTCCATGTTTGTGGTTTTGAAAAAGAAACCCCTGATGAAGTGCCTAATTTTCATATTTTGACCTTGGATGAAGATTCTGGAGAGTGAAATTTCTT

mRNA sequence

ATGCATCCGAAAAATCAACACCGTTTTCAGATCTTCCTTCAGTCTCCCGACCTACAGATTGAATCCAAAATCGTAAACCTACCACAAACACCGGCCAAAACCCTAGAGGACCTGAAGTTCTCTCTTCTCACTGAAATACTCGCTTCACGGATTGCATCATCTTTCTACTTTACCCTCAATGGGAAACCCCTTCTCGATTCCACTACGATTTCTCTAATTCCCCCTTTGTCCACCTTAATCTTAAGAACCAGGGTCCTTGGAGGTGGTGGCGATGGCGGTGCAACGGGGGCTGAGTCGCGTGACTGCTACCTTAATATGTACGCGGAGAAGAAACCCGATAAGGTCGATCCTAACGAGCAGAGGCTGTCCAAGTGGTTGAATTGCGCTCTTTCTAACGAGCCTTTGAGGGAACCTTGTGTGATTGATTGGCTTGGAAATGTCTTCAATAAGGAATCGCTTGTGCAGGCTTTGCTAGAGAAGAAGTTGCCAAAAGGATTCGGGCATATCAAGGGTCTGAAGGATATGATCAAGATAAATTTTTCGATGATTCCCGGTACAGAATCGCGTGGGAATGCTATTTCAGAGCCGCGGTACCAATGTCCAGTTACTGGTCTTGAGTTCAATGGTAAGTACAAGTTTTTCGCTCTGAGAACTTGTGGACATGTGTTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCTTCTTCCTGCCTTGTTTGTCATGCTGAGTTTGCGGAAAGAGATAAATTTGTGATTAATGGGAGCGAGGAGGAGGTAGAAGAAATGAGGGAGAGAATGGAGGAAGAGAAGTCTAAGTCGAAATCAAAGGAGAAGAAGACAAAGAAAGTAAGGAATGGGGAAGTGGGTATGAATGGAGATGTGAGTGTGGATTTGGCAATATCTCGTTTGTCTGGTAAAAAGCATGCTATTGAAGTTAAGTCTTTGGAGAAGGTTTCTGCTAAGCCTGAAAGGCAAGAGCGGCTAGATGGTGGAGCTCAGGTAAAGGATGCAACTAGTAATGGTGCCGTAAAGCGTTTTAAAGCAGCAGACATGGTCCCTGCCAATGCTACCAAAGAAGTTTATGCTTCAATATTCACCTCATCTAGGAAGTCAGATTTCAAGGAAACATATTCTTGTAGATCTCTTCCACTCGGTCGAAACTAA

Coding sequence (CDS)

ATGCATCCGAAAAATCAACACCGTTTTCAGATCTTCCTTCAGTCTCCCGACCTACAGATTGAATCCAAAATCGTAAACCTACCACAAACACCGGCCAAAACCCTAGAGGACCTGAAGTTCTCTCTTCTCACTGAAATACTCGCTTCACGGATTGCATCATCTTTCTACTTTACCCTCAATGGGAAACCCCTTCTCGATTCCACTACGATTTCTCTAATTCCCCCTTTGTCCACCTTAATCTTAAGAACCAGGGTCCTTGGAGGTGGTGGCGATGGCGGTGCAACGGGGGCTGAGTCGCGTGACTGCTACCTTAATATGTACGCGGAGAAGAAACCCGATAAGGTCGATCCTAACGAGCAGAGGCTGTCCAAGTGGTTGAATTGCGCTCTTTCTAACGAGCCTTTGAGGGAACCTTGTGTGATTGATTGGCTTGGAAATGTCTTCAATAAGGAATCGCTTGTGCAGGCTTTGCTAGAGAAGAAGTTGCCAAAAGGATTCGGGCATATCAAGGGTCTGAAGGATATGATCAAGATAAATTTTTCGATGATTCCCGGTACAGAATCGCGTGGGAATGCTATTTCAGAGCCGCGGTACCAATGTCCAGTTACTGGTCTTGAGTTCAATGGTAAGTACAAGTTTTTCGCTCTGAGAACTTGTGGACATGTGTTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCTTCTTCCTGCCTTGTTTGTCATGCTGAGTTTGCGGAAAGAGATAAATTTGTGATTAATGGGAGCGAGGAGGAGGTAGAAGAAATGAGGGAGAGAATGGAGGAAGAGAAGTCTAAGTCGAAATCAAAGGAGAAGAAGACAAAGAAAGTAAGGAATGGGGAAGTGGGTATGAATGGAGATGTGAGTGTGGATTTGGCAATATCTCGTTTGTCTGGTAAAAAGCATGCTATTGAAGTTAAGTCTTTGGAGAAGGTTTCTGCTAAGCCTGAAAGGCAAGAGCGGCTAGATGGTGGAGCTCAGGTAAAGGATGCAACTAGTAATGGTGCCGTAAAGCGTTTTAAAGCAGCAGACATGGTCCCTGCCAATGCTACCAAAGAAGTTTATGCTTCAATATTCACCTCATCTAGGAAGTCAGATTTCAAGGAAACATATTCTTGTAGATCTCTTCCACTCGGTCGAAACTAA

Protein sequence

MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLNGKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINFSMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLAISRLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKEVYASIFTSSRKSDFKETYSCRSLPLGRN*
Homology
[Close]
BLAST of Csa1G269330 vs. Swiss-Prot
Match: RTF2_RAT (Protein RTF2 homolog OS=Rattus norvegicus GN=Rtfdc1 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.4e-36
Identity = 99/272 (36.40%), Postives = 144/272 (52.94%), Query Frame = 1 

Query: 110 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 169
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEVLRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 170 --HIKGLKDMIKINFSMIPGTES-RGNA-------ISEPRYQCPVTGLEFNGKYKFFALR 229
             HI+ +K++ ++  S  P  E  +GN        +   R+ CPV GLE NG+++F  LR
Sbjct: 79  TSHIRSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 230 TCGHVLSAKALKEVKSSSCLVCHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEK 289
            CG V S +ALKE+K+  C  C A F E D  V+NG++E+VE ++ RMEE + ++K  EK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKRRMEERRLRAK-LEK 198

Query: 290 KTKKVRNGEVGMNGDVSVDLA--ISRLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVK- 349
           KTKK +  E      +S D A      +GK    +    EK S+   R    +G A  K 
Sbjct: 199 KTKKPKTAESASKLGISQDSAGPSKAKAGKSEEADPDPREKKSSLAPRGTASNGSASGKV 258

Query: 350 DATSNGAVKRFKAADMVPANATKEVYASIFTS 367
                GA+KR      +  +   E Y SIFTS
Sbjct: 259 GKPPCGALKR-----SIADSEESETYKSIFTS 284

[Close]
BLAST of Csa1G269330 vs. Swiss-Prot
Match: RTF2_MOUSE (Protein RTF2 homolog OS=Mus musculus GN=Rtfdc1 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.8e-34
Identity = 98/273 (35.90%), Postives = 143/273 (52.38%), Query Frame = 1 

Query: 110 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 169
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 170 --HIKGLKDMIKINFSMIPGTES-RGNA-------ISEPRYQCPVTGLEFNGKYKFFALR 229
             HI+ +K++ ++  S  P  E  +GN        +   R+ CPV GLE NG+++F  LR
Sbjct: 79  ASHIRSIKNVTELRLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 230 TCGHVLSAKALKEVKSSSCLVCHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEK 289
            CG V S +ALKE+K+  C  C A F E D  V+NG++E+VE +++RMEE + ++K  EK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKKRMEERRLRAK-LEK 198

Query: 290 KTKKVRNGE--VGMNGDVSVDLAISRL-SGKKHAIEVKSLEKVSAKPERQERLDGGAQVK 349
           KTKK +         G        S++ SGK    +    EK S    R    +G A  K
Sbjct: 199 KTKKPKTATECASKPGTTQDSAGPSKVKSGKPEEADPDPREKKSTPAPRGAATNGSASGK 258

Query: 350 -DATSNGAVKRFKAADMVPANATKEVYASIFTS 367
                 GA+KR      +  +   E Y SIFTS
Sbjct: 259 VGKPPCGALKR-----SIADSEESETYKSIFTS 285

[Close]
BLAST of Csa1G269330 vs. Swiss-Prot
Match: RTF2_PONAB (Protein RTF2 homolog OS=Pongo abelii GN=RTFDC1 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.1e-33
Identity = 99/283 (34.98%), Postives = 150/283 (53.00%), Query Frame = 1 

Query: 110 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 169
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 170 --HIKGLKDMIKINFSMIPGTES-RGNA-------ISEPRYQCPVTGLEFNGKYKFFALR 229
             HIK +K++ ++  S  P  E  +GN        +   R+ CPV GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 230 TCGHVLSAKALKEVKSSSCLVCHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEK 289
            CG V S +ALKE+K+  C  C A F E D  V+NG++E+V+ ++ RMEE + ++K  EK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVDVLKTRMEERRLRAK-LEK 198

Query: 290 KTKKVRNGEVGMNGDVSVDL-AISRL-SGKKHAIEVKSLE-KVSAKPERQERLDGGAQVK 349
           KTKK +  E     DVS +    S++ +GK     + S E K +  P+     +  +   
Sbjct: 199 KTKKPKAAESVSKPDVSEEAPGPSKVKTGKPEEASLDSREKKTNLAPKSTATNESSSGKA 258

Query: 350 DATSNGAVKRFKAADMVPANATKEVYASIFT--SSRKSDFKET 376
                GA KR      +  +   E Y S+FT  SS K   +E+
Sbjct: 259 GKPPCGATKR-----SIADSEESEAYKSLFTTHSSAKRSKEES 295

[Close]
BLAST of Csa1G269330 vs. Swiss-Prot
Match: RTF2_HUMAN (Protein RTF2 homolog OS=Homo sapiens GN=RTFDC1 PE=1 SV=3)

HSP 1 Score: 144.4 bits (363), Expect = 2.5e-33
Identity = 98/283 (34.63%), Postives = 150/283 (53.00%), Query Frame = 1 

Query: 110 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 169
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 170 --HIKGLKDMIKINFSMIPGTES-RGNA-------ISEPRYQCPVTGLEFNGKYKFFALR 229
             HIK +K++ ++  S  P  E  +GN        +   R+ CPV GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 230 TCGHVLSAKALKEVKSSSCLVCHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEK 289
            CG V S +ALKE+K+  C  C A F E D  ++NG++E+V+ ++ RMEE + ++K  EK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIMLNGTKEDVDVLKTRMEERRLRAK-LEK 198

Query: 290 KTKKVRNGEVGMNGDVSVDL-AISRL-SGKKHAIEVKSLE-KVSAKPERQERLDGGAQVK 349
           KTKK +  E     DVS +    S++ +GK     + S E K +  P+     +  +   
Sbjct: 199 KTKKPKAAESVSKPDVSEEAPGPSKVKTGKPEEASLDSREKKTNLAPKSTAMNESSSGKA 258

Query: 350 DATSNGAVKRFKAADMVPANATKEVYASIFT--SSRKSDFKET 376
                GA KR      +  +   E Y S+FT  SS K   +E+
Sbjct: 259 GKPPCGATKR-----SIADSEESEAYKSLFTTHSSAKRSKEES 295

[Close]
BLAST of Csa1G269330 vs. Swiss-Prot
Match: RTF2_PIG (Protein RTF2 homolog OS=Sus scrofa GN=RTFDC1 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.3e-33
Identity = 96/283 (33.92%), Postives = 145/283 (51.24%), Query Frame = 1 

Query: 110 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 169
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSSEKALGKA 78

Query: 170 --HIKGLKDMIKINFSMIPGTES--------RGNAISEPRYQCPVTGLEFNGKYKFFALR 229
             HIK +K++ ++  S  P  E         + + +   R+ CPV GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELRLSDNPAWEGDKGSTKGDKHDDLQRARFICPVVGLEMNGRHRFCYLR 138

Query: 230 TCGHVLSAKALKEVKSSSCLVCHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEK 289
            CG V S +ALKE+K+  C  C A F E D  V+NG++E+V  ++ RMEE + ++K   K
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVAMLQTRMEERRLRAK-LGK 198

Query: 290 KTKKVRNGEVGMNGDVSVDL--AISRLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKD 349
           KTKK +  E     D+S +        +GK     + S EK ++   R     G +  K 
Sbjct: 199 KTKKPKAAESVSKSDISEEAPGPSKMKAGKPEETSLDSREKKTSSAPRSAAAHGSSSGKA 258

Query: 350 ATS-NGAVKRFKAADMVPANATKEVYASIFT--SSRKSDFKET 376
                GA KR      +  +   E Y S+FT  SS K   +E+
Sbjct: 259 GKPVCGAPKR-----SIADSGESEAYKSLFTTHSSAKRSKEES 295

[Close]
BLAST of Csa1G269330 vs. TrEMBL
Match: A0A0A0LTI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G269330 PE=4 SV=1)

HSP 1 Score: 766.9 bits (1979), Expect = 1.2e-218
Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 1 

Query: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60
           MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN
Sbjct: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60

Query: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120
           GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ
Sbjct: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120

Query: 121 RLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180
           RLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF
Sbjct: 121 RLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180

Query: 181 SMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240
           SMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH
Sbjct: 181 SMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240

Query: 241 AEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLAIS 300
           AEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLAIS
Sbjct: 241 AEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLAIS 300

Query: 301 RLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKEVY 360
           RLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKEVY
Sbjct: 301 RLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]
BLAST of Csa1G269330 vs. TrEMBL
Match: M5VW12_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007127mg PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 9.7e-141
Identity = 261/389 (67.10%), Postives = 303/389 (77.89%), Query Frame = 1 

Query: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60
           MHPK  H FQIFLQSPDLQI ++ + L  T   TL  LK S+ +  L S      YFTLN
Sbjct: 1   MHPK-LHNFQIFLQSPDLQIPTQTITLAPTQTPTLRHLKLSIFSHTLPS-----LYFTLN 60

Query: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPL DST +  S I PLSTL+LR R  GGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLNDSTPLLDSQITPLSTLVLRIRACGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNC+LSNEPL+EPCV+D+LGNVFNKE LV+ALL KK+PK FGHIKGLKDMI +
Sbjct: 121 EQRLSKWLNCSLSNEPLKEPCVVDFLGNVFNKEPLVEALLGKKVPKAFGHIKGLKDMITV 180

Query: 181 NFSMIPGTES-RGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCL 240
           +FS IPGTES R ++ + PR+QCP++G+EFNGK KF AL+TCGHVLSAKALKEVKSS+CL
Sbjct: 181 HFSPIPGTESNRRSSAAGPRFQCPISGVEFNGKCKFLALKTCGHVLSAKALKEVKSSTCL 240

Query: 241 VCHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDL 300
           VCHA F+E DK VING+EEEV  +R+RME E  K+K + KK KK +NG+  +NG+  +  
Sbjct: 241 VCHAGFSEADKIVINGNEEEVAALRDRMEAE--KAKGRVKKMKKTKNGDATLNGEEGMGF 300

Query: 301 AISRLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATK 360
             SRLSG KH I+VK++EK SA  E   ++  G       SNGA KRFKA D+ P NATK
Sbjct: 301 EASRLSGTKHGIDVKAVEKASANVEVHGKVVNGGDNVKGVSNGAAKRFKAVDIAPPNATK 360

Query: 361 EVYASIFTSSRKSDFKETYSCRSLPLGRN 387
           EVYASIFTSSRKS+FKETYSCRSLPLGRN
Sbjct: 361 EVYASIFTSSRKSEFKETYSCRSLPLGRN 381

[Close]
BLAST of Csa1G269330 vs. TrEMBL
Match: W9QY07_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003302 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 4.1e-131
Identity = 256/390 (65.64%), Postives = 294/390 (75.38%), Query Frame = 1 

Query: 8   RFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLNGKPLLDS 67
           R QIF++SPDLQ  +K + L  T ++TL  LK  L      S I SS YFTLNGK L D 
Sbjct: 7   RMQIFVESPDLQTPTKTLTLTPTKSQTLRSLKLFLFP----SEILSSCYFTLNGKRLDDD 66

Query: 68  TTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKW 127
           ++I  S I PLSTLILR+R  GGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKW
Sbjct: 67  SSILSSQIAPLSTLILRSRARGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKW 126

Query: 128 LNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINFSMIPG 187
           LNCALSNEPL+EPCV+DWLGNVFNKE+LVQALL K +PK FGH+KGLKDMIKI  S+IPG
Sbjct: 127 LNCALSNEPLKEPCVVDWLGNVFNKEALVQALLGKNIPKAFGHVKGLKDMIKIQLSVIPG 186

Query: 188 TESRGNAIS--EPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHAEF 247
            E  G+  S    R+QCP+TGLEFNGKYKFF+LR CGHVLSAKALKEVK+SSCLVCH EF
Sbjct: 187 VEEDGDRDSGARARFQCPITGLEFNGKYKFFSLRKCGHVLSAKALKEVKTSSCLVCHVEF 246

Query: 248 AERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLAISRLS 307
           +E DK VINGS+EEV  +RERME E  K K KEKK KKV+NG  G++ D       +RLS
Sbjct: 247 SESDKIVINGSDEEVMVLRERMEME--KGKLKEKKGKKVKNGGDGLDSD------SARLS 306

Query: 308 GKKHAI--EVKSLEKVSAKPERQERLDGGAQ-----VKDATSNGAVKRFKAADMVPANAT 367
           G KH I   VK+  K  +K E   ++   A       K +++  A KRFKA D+ PANA 
Sbjct: 307 GTKHGIGDGVKADWKALSKVEADGKVGKAASNVRIPFKSSSNGNAAKRFKATDIAPANAN 366

Query: 368 KEVYASIFTSSRKSDFKETYSCRSLPLGRN 387
           KEVYASIFTSS+KSDFKET++CRSLPLGRN
Sbjct: 367 KEVYASIFTSSKKSDFKETFTCRSLPLGRN 384

[Close]
BLAST of Csa1G269330 vs. TrEMBL
Match: F6HYI7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00090 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 9.1e-131
Identity = 258/390 (66.15%), Postives = 298/390 (76.41%), Query Frame = 1 

Query: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60
           MH   Q + QI +QSPDL I ++ + L   P  TL +LK SLL      +   SF+FTL+
Sbjct: 1   MHTPKQSQIQILIQSPDLPIATRALTL--NPNSTLRNLKLSLLPP----QTLDSFFFTLH 60

Query: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GK L DS+T+  S I PLSTL+LR R+ GGGGDGGATGAESRDCYLNMYA KKPDKVDPN
Sbjct: 61  GKALHDSSTLQKSGINPLSTLVLRFRLPGGGGDGGATGAESRDCYLNMYAVKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKW  C+LS EPLR PCV+D LGNVFNKE+LV+ LL KKLPK FGHI+GLKDM+ I
Sbjct: 121 EQRLSKWTTCSLSFEPLRHPCVVDRLGNVFNKEALVEGLLGKKLPKAFGHIRGLKDMVPI 180

Query: 181 NFSMIPGTESRGNAISE-PRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCL 240
             S+IPG ES    +S   RYQCP+TGLEFNGKY+FFAL+TCGHVLSAKALKEVKSS+CL
Sbjct: 181 ELSVIPGLESDNGGVSAGARYQCPITGLEFNGKYRFFALKTCGHVLSAKALKEVKSSACL 240

Query: 241 VCHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDL 300
           VCH  F E DK  INGSEEEV  +RERMEEE  ++K +EKK KKV+NGEVG+NGD  V L
Sbjct: 241 VCHEGFKEEDKIPINGSEEEVAALRERMEEE--RAKLREKKAKKVKNGEVGVNGDEDVYL 300

Query: 301 AISRLSGKKHAIEVKSLEKVSAKPERQ-ERLDGGAQVKDATSNGAVKRFKAADMVPANAT 360
             SRLSGKKH I+ K++ +V AK E+  + ++GG  VK   S   VKR KAA  VP NAT
Sbjct: 301 D-SRLSGKKHGIDAKAVGRVDAKMEKNGKAVNGGVVVKGEIS--GVKRLKAA-QVPPNAT 360

Query: 361 KEVYASIFTSSRKSDFKETYSCRSLPLGRN 387
           KEVYASIFTSSRKS+FKETY CRSLPLGRN
Sbjct: 361 KEVYASIFTSSRKSEFKETYMCRSLPLGRN 378

[Close]
BLAST of Csa1G269330 vs. TrEMBL
Match: U5FKL5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s11830g PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 1.2e-130
Identity = 256/391 (65.47%), Postives = 302/391 (77.24%), Query Frame = 1 

Query: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60
           MH K+    QIF+QS + Q +++ + L  T   TL +LK SL+T+   ++  SSFYFTLN
Sbjct: 1   MHTKSH---QIFIQSQNPQFKTQTLTLDPTQTLTLYNLKLSLITD---NQNPSSFYFTLN 60

Query: 61  GKPLLDSTTIS--LIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPL DST +    I PL TLIL+ R+ GGGGDGGATGAESRDCYLNMYA+KKPDKVDP+
Sbjct: 61  GKPLKDSTCLPNPQITPLCTLILQVRLSGGGGDGGATGAESRDCYLNMYADKKPDKVDPH 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           E RLSKWLNC+LSNEPLR+PCVID LGN+FNKE+LV+AL+ KKLPK FG+IKGLKDMI I
Sbjct: 121 ELRLSKWLNCSLSNEPLRQPCVIDRLGNMFNKEALVEALIGKKLPKEFGYIKGLKDMIDI 180

Query: 181 NFSMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
              ++PG +  GNA    R+QCPVTGLEFNGKYKFFAL+ CGHVLSAKALKEVKSS CLV
Sbjct: 181 QLEVVPG-DGSGNA----RFQCPVTGLEFNGKYKFFALKNCGHVLSAKALKEVKSSECLV 240

Query: 241 CHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGD--VSVD 300
           C+ EF E DK VINGSEEEV  +RERMEEE  +SK KEKK KKV+NGEVG NG+      
Sbjct: 241 CYKEFEECDKIVINGSEEEVAVLRERMEEE--RSKMKEKKMKKVKNGEVGANGEEFSGQG 300

Query: 301 LAISRLSGKKHAI-EVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANA 360
             +S+LSGKKH I +VK ++KV  K +   +++    VK  +  G+VKRFKA DMVP NA
Sbjct: 301 AEVSQLSGKKHGIVDVKGVDKVVGKVKGNGKVE---NVKGVSHGGSVKRFKATDMVPTNA 360

Query: 361 TKEVYASIFTSSRKSDFKETYSCRSLPLGRN 387
           TKEVYASIFTSS+K  FKETYSCRSLPLGRN
Sbjct: 361 TKEVYASIFTSSKKQSFKETYSCRSLPLGRN 375

[Close]
BLAST of Csa1G269330 vs. TAIR10
Match: AT5G58020.1 (AT5G58020.1 unknown protein)

HSP 1 Score: 401.0 bits (1029), Expect = 8.4e-112
Identity = 226/388 (58.25%), Postives = 268/388 (69.07%), Query Frame = 1 

Query: 8   RFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFY---FTLNGKPL 67
           R QIF++SPD Q   K+V L   PA++L  L  S +T +L S    SF     TL+GK L
Sbjct: 4   RRQIFVKSPDCQ---KVVALQLDPAQSL--LTLSGITSLLESSQRISFSACSITLDGKLL 63

Query: 68  LDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRL 127
             ST I  S +P +S L L  R+ GGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRL
Sbjct: 64  NGSTRIQVSKLPSVSMLTLFPRLRGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRL 123

Query: 128 SKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINFSM 187
           SKWLNCALSNEPL EPCVID LGN+FNKE LV ALL K+LPK F +IKGLKDM+ I  + 
Sbjct: 124 SKWLNCALSNEPLAEPCVIDLLGNLFNKEVLVHALLSKRLPKQFSYIKGLKDMVNIKLTP 183

Query: 188 IPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHAE 247
           + G++      +  ++QCPV+GLEFNGKYKFFALR CGHV+SAKALKEVKSSSCLVCHA+
Sbjct: 184 VAGSDGSSQDTTSAQFQCPVSGLEFNGKYKFFALRGCGHVMSAKALKEVKSSSCLVCHAD 243

Query: 248 FAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLAISRL 307
             + DK VING+EEEV+ +RERMEEEK+K + K+  +KK +NG                 
Sbjct: 244 VKDSDKIVINGTEEEVDLLRERMEEEKAKLREKKGVSKKSKNGA---------------- 303

Query: 308 SGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNG---AVKRFKAADMVPANATKEV 367
                A+   +  KV+ +           Q++D   NG    VK+FKAAD VP NATKEV
Sbjct: 304 -----AVVADTGAKVAKR-----------QIEDGNVNGNGITVKKFKAADKVPVNATKEV 354

Query: 368 YASIFTSS-RKSDFKETYSCRSLPLGRN 387
           YAS+FTSS +KSDF+ETYSCRSLPLGRN
Sbjct: 364 YASLFTSSKKKSDFRETYSCRSLPLGRN 354

[Close]
BLAST of Csa1G269330 vs. NCBI nr
Match: gi|778660265|ref|XP_011655923.1| (PREDICTED: protein RTF2 homolog [Cucumis sativus])

HSP 1 Score: 766.9 bits (1979), Expect = 1.7e-218
Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 1 

Query: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60
           MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN
Sbjct: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60

Query: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120
           GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ
Sbjct: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120

Query: 121 RLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180
           RLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF
Sbjct: 121 RLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180

Query: 181 SMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240
           SMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH
Sbjct: 181 SMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240

Query: 241 AEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLAIS 300
           AEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLAIS
Sbjct: 241 AEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLAIS 300

Query: 301 RLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKEVY 360
           RLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKEVY
Sbjct: 301 RLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]
BLAST of Csa1G269330 vs. NCBI nr
Match: gi|659086633|ref|XP_008444038.1| (PREDICTED: protein RTF2 homolog [Cucumis melo])

HSP 1 Score: 726.1 bits (1873), Expect = 3.3e-206
Identity = 362/386 (93.78%), Postives = 373/386 (96.63%), Query Frame = 1 

Query: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60
           MHPKNQHR QIFL SPDLQI+SKIV+LPQT AKTLEDLKFSLL+E LASR+ASS YFTLN
Sbjct: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60

Query: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120
           GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ
Sbjct: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120

Query: 121 RLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180
           RLSKWLNCALSNEPL EPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF
Sbjct: 121 RLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180

Query: 181 SMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240
           SMIPGTESRGNAISEPR+QCP+TGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH
Sbjct: 181 SMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240

Query: 241 AEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLAIS 300
            EF ERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDV++DLA S
Sbjct: 241 TEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLATS 300

Query: 301 RLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKEVY 360
           RLSGKKH IE+++LEKVSAKPER ERLDGGAQVK A SNGAVKRFKAADMVPANATKEVY
Sbjct: 301 RLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]
BLAST of Csa1G269330 vs. NCBI nr
Match: gi|595818692|ref|XP_007204400.1| (hypothetical protein PRUPE_ppa007127mg [Prunus persica])

HSP 1 Score: 508.1 bits (1307), Expect = 1.4e-140
Identity = 261/389 (67.10%), Postives = 303/389 (77.89%), Query Frame = 1 

Query: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60
           MHPK  H FQIFLQSPDLQI ++ + L  T   TL  LK S+ +  L S      YFTLN
Sbjct: 1   MHPK-LHNFQIFLQSPDLQIPTQTITLAPTQTPTLRHLKLSIFSHTLPS-----LYFTLN 60

Query: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPL DST +  S I PLSTL+LR R  GGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLNDSTPLLDSQITPLSTLVLRIRACGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNC+LSNEPL+EPCV+D+LGNVFNKE LV+ALL KK+PK FGHIKGLKDMI +
Sbjct: 121 EQRLSKWLNCSLSNEPLKEPCVVDFLGNVFNKEPLVEALLGKKVPKAFGHIKGLKDMITV 180

Query: 181 NFSMIPGTES-RGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCL 240
           +FS IPGTES R ++ + PR+QCP++G+EFNGK KF AL+TCGHVLSAKALKEVKSS+CL
Sbjct: 181 HFSPIPGTESNRRSSAAGPRFQCPISGVEFNGKCKFLALKTCGHVLSAKALKEVKSSTCL 240

Query: 241 VCHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDL 300
           VCHA F+E DK VING+EEEV  +R+RME E  K+K + KK KK +NG+  +NG+  +  
Sbjct: 241 VCHAGFSEADKIVINGNEEEVAALRDRMEAE--KAKGRVKKMKKTKNGDATLNGEEGMGF 300

Query: 301 AISRLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATK 360
             SRLSG KH I+VK++EK SA  E   ++  G       SNGA KRFKA D+ P NATK
Sbjct: 301 EASRLSGTKHGIDVKAVEKASANVEVHGKVVNGGDNVKGVSNGAAKRFKAVDIAPPNATK 360

Query: 361 EVYASIFTSSRKSDFKETYSCRSLPLGRN 387
           EVYASIFTSSRKS+FKETYSCRSLPLGRN
Sbjct: 361 EVYASIFTSSRKSEFKETYSCRSLPLGRN 381

[Close]
BLAST of Csa1G269330 vs. NCBI nr
Match: gi|694354542|ref|XP_009358470.1| (PREDICTED: protein RTF2 homolog [Pyrus x bretschneideri])

HSP 1 Score: 504.2 bits (1297), Expect = 2.0e-139
Identity = 265/390 (67.95%), Postives = 306/390 (78.46%), Query Frame = 1 

Query: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60
           MHPK Q+ FQIFLQSPDLQI ++ + L      TL  LK S+      SR+  S YFTLN
Sbjct: 1   MHPKLQN-FQIFLQSPDLQIPTQTLTLSPIQTPTLRHLKLSIF-----SRVLPSLYFTLN 60

Query: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPL DST +  S I PLSTLILR R LGGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLNDSTPLFDSQITPLSTLILRIRALGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPL+EPCV+D+LGNVFNKE+LV+ALL KK+PK FGHIKGLKDMI I
Sbjct: 121 EQRLSKWLNCALSNEPLKEPCVMDFLGNVFNKEALVEALLGKKVPKAFGHIKGLKDMISI 180

Query: 181 NFSMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           + + I G E    +++ PR+QCP+TG+EFNGK KF  LRTCGHVLS+KALKE+KSS+CLV
Sbjct: 181 HLTPITGAEFNRQSVAGPRFQCPITGVEFNGKCKFVGLRTCGHVLSSKALKEIKSSTCLV 240

Query: 241 CHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNG-DVSVDL 300
           CH  F+E DK VING+EEEV E+RERME E  K+K + KK KK +NG  G+NG +  V L
Sbjct: 241 CHVGFSEADKIVINGNEEEVVELRERMEAE--KAKGRVKKVKKTKNGNAGVNGEEEGVGL 300

Query: 301 AISRLSGKKHAIEVKSLEKVSAKPERQER-LDGGAQVKDATSNGAVKRFKAADMVPANAT 360
             SRLSG KH I+ +++EKVSAK E   + ++ GA VK A SNG  KRFKA D+ PANAT
Sbjct: 301 EASRLSGTKHGIDARAVEKVSAKVEVNGKVVNVGADVKGA-SNGGAKRFKAVDIAPANAT 360

Query: 361 KEVYASIFTSSRKSDFKETYSCRSLPLGRN 387
           KEVYASIFTSSRK DFKET+SCRSLPLGRN
Sbjct: 361 KEVYASIFTSSRKKDFKETFSCRSLPLGRN 381

[Close]
BLAST of Csa1G269330 vs. NCBI nr
Match: gi|1009109846|ref|XP_015892443.1| (PREDICTED: protein RTF2 homolog [Ziziphus jujuba])

HSP 1 Score: 503.8 bits (1296), Expect = 2.6e-139
Identity = 269/386 (69.69%), Postives = 306/386 (79.27%), Query Frame = 1 

Query: 8   RFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLNGKPLLDS 67
           RFQIF+QS DL+I ++ ++L  T ++T+ DLK SL    L SR  SS YFTLNGKPL DS
Sbjct: 8   RFQIFVQSLDLEISTRTLSLTPTESQTIRDLKLSLFPNHLPSRSPSSLYFTLNGKPLDDS 67

Query: 68  TTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKW 127
           + I  S I PLSTLILRTR  GGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKW
Sbjct: 68  SRILGSQIAPLSTLILRTRARGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKW 127

Query: 128 LNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINFSMIPG 187
            NCALS+EPL+EPCV+D+LGNVFNK SLV+ALL KK+PK FGHIKGLKDMI I  S IPG
Sbjct: 128 QNCALSSEPLKEPCVVDFLGNVFNKVSLVEALLGKKMPKEFGHIKGLKDMINIQLSAIPG 187

Query: 188 TESRGNAISE-PRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHAEFA 247
            +  G+  S   R+QCP+TGLEFNGKYKFFALRTCGHVLSAKAL+EVKSSSCLVCH EF 
Sbjct: 188 IDRDGDGFSAGARFQCPITGLEFNGKYKFFALRTCGHVLSAKALREVKSSSCLVCHKEFT 247

Query: 248 ERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRN-GEVG-MNGDVSVDLAISRL 307
           E DK VINGS+EEV+ +R+ ME E  K+K +EKK+KKVRN GEV  +NGD  V +  SRL
Sbjct: 248 ETDKIVINGSDEEVKVLRDMMEAE--KAKLREKKSKKVRNGGEVEVVNGDKGVAVDSSRL 307

Query: 308 SGKKHAIEVKSLEKVSAKPERQERLDGGAQVKD--ATSNGAVKRFKAADMVPANATKEVY 367
           SGKKH I+ K+ EK  AK E   ++  GA      A  NGAVKRFKAAD+ P NA KEVY
Sbjct: 308 SGKKHGIDNKAGEKAVAKVEGNGKVANGANSLKGAANGNGAVKRFKAADIAPPNANKEVY 367

Query: 368 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSS+KSDFKET+SCRSLPLGRN
Sbjct: 368 ASIFTSSKKSDFKETFSCRSLPLGRN 391

The following BLAST results are available for this feature:
BLAST of Csa1G269330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RTF2_RAT5.4e-3636.40Protein RTF2 homolog OS=Rattus norvegicus GN=Rtfdc1 PE=2 SV=1[more]
RTF2_MOUSE1.8e-3435.90Protein RTF2 homolog OS=Mus musculus GN=Rtfdc1 PE=1 SV=1[more]
RTF2_PONAB1.1e-3334.98Protein RTF2 homolog OS=Pongo abelii GN=RTFDC1 PE=2 SV=1[more]
RTF2_HUMAN2.5e-3334.63Protein RTF2 homolog OS=Homo sapiens GN=RTFDC1 PE=1 SV=3[more]
RTF2_PIG4.3e-3333.92Protein RTF2 homolog OS=Sus scrofa GN=RTFDC1 PE=3 SV=1[more]
BLAST of Csa1G269330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTI5_CUCSA1.2e-218100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G269330 PE=4 SV=1[more]
M5VW12_PRUPE9.7e-14167.10Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007127mg PE=4 SV=1[more]
W9QY07_9ROSA4.1e-13165.64Uncharacterized protein OS=Morus notabilis GN=L484_003302 PE=4 SV=1[more]
F6HYI7_VITVI9.1e-13166.15Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00090 PE=4 SV=... [more]
U5FKL5_POPTR1.2e-13065.47Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s11830g PE=4 SV=1[more]
BLAST of Csa1G269330 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58020.18.4e-11258.25 unknown protein[more]
BLAST of Csa1G269330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778660265|ref|XP_011655923.1|1.7e-218100.00PREDICTED: protein RTF2 homolog [Cucumis sativus][more]
gi|659086633|ref|XP_008444038.1|3.3e-20693.78PREDICTED: protein RTF2 homolog [Cucumis melo][more]
gi|595818692|ref|XP_007204400.1|1.4e-14067.10hypothetical protein PRUPE_ppa007127mg [Prunus persica][more]
gi|694354542|ref|XP_009358470.1|2.0e-13967.95PREDICTED: protein RTF2 homolog [Pyrus x bretschneideri][more]
gi|1009109846|ref|XP_015892443.1|2.6e-13969.69PREDICTED: protein RTF2 homolog [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006735Rtf2
IPR013083Znf_RING/FYVE/PHD
IPR027799Rtf2_RING-finger
Vocabulary: Biological Process
TermDefinition
GO:1902979mitotic DNA replication termination
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1902979 mitotic DNA replication termination
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU094617cucumber EST collection version 3.0transcribed_cluster
CU105302cucumber EST collection version 3.0transcribed_cluster
CU135933cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G269330.1Csa1G269330.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU105302CU105302transcribed_cluster
CU094617CU094617transcribed_cluster
CU135933CU135933transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006735Replication termination factor 2PANTHERPTHR12775PROTEIN C20ORF43 HOMOLOGcoord: 89..386
score: 3.4E
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 120..138
score: 6.1E-4coord: 214..271
score: 6.
IPR027799Replication termination factor 2, RING-fingerPFAMPF04641Rtf2coord: 88..370
score: 8.1
NoneNo IPR availableunknownCoilCoilcoord: 251..278
scor