CmoCh06G010280 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTGGGTAAGGGTTAGTGCTTTCTTATTATTATCATCAGAGCTTGATTCCCAATTTTAAGCTCTGTTCTTCGATCATTGCCCAACCCCACGAACGAAAGAAACCATACCTAGATAAAAGCCATCTGGGTTTCCTTTCTAATATTTGAACTATTAACCACGCCATCAATCGCTGCGATTTGATTTGCAAATTCCGTTCTTTTTCTTAGTTGATTCCGTAGGAGAGGTTGGATTTTTTCGCATCACCGGTGTTTCGGAGCAAAATCAGAATCTGGGTTGATGGCTAATCTCTATGTCAAGGCTATGCCTCCGGCGGATCTGAATAGGAACACGGAATGGTTTCTTTATCCTGGTGTTTGGACGACTTATATTCTCATTTTGTTCTTCACTTGGCTTCTCGTTCTCTCTGTATTTGGCTGCTCTCCTGGAATGGCCTGGACCATCGTCAATCTATCTCATTTTGCTGTATGTGCATCGATTTTGTTTTTTCTTTTCTTTTTGATCTGGGTGTTGTTTCCTTCCCTTGATATCATCATGGACGTTGGATTGTTGTTGACTTGTATGCTGCTTTAATCCTCTTCAATTTAATCTTACTGTGATTTCGTTTTCGTTGATTTTGTGAAAATGAAACAAGGATGGATAGCCCAACTGTTCTGGCTTTGTGAATTTGATTTTGGATTCATGCTTGGTTTGGTAATTATATGCTTATTGTACTTGCATGTAAGTAATTTTGATAGAAAGAGATTCATTTCTTCTGTTCGATTTTTACTGTTTCAGATGTTCATCTTTGGATTCTTGGTGCGGAGGGATATTGTAGTAGATAAACATTCTAGTATCTTTGATTTCATAACCCTTTTCCGTGTTGTTTTATTTCAAGCCTCGAGCCATTGATAGTCTTAGGCTGTTGTTTAGTTTAATGGCACTAAGTTTGTTTGTGGAAGCCAAACGGGTGAAATGTGATTAGAAATGGTTGAAAAGACCATAATTGTTTCAGCCTGTGTTTGATGTATTGCCATACATGTTTTTATGTGTAAATGTGAATCTTTCTGGGTTAAGAGTCAGTGAACTCCGTTCGTAATTTTCTCGATGTGTGGTCCTAGCGATCAGCTTAGAATGATTTAGAACGTTCTTATGCTCCGTGTATAAAATGATAGAAATCTGTGTCTTTTACTTCAGGTCACTTACCACTGCTTCCATTGGAAGAAAGGGACACCATTTGCTGAAGACCAAGGGATCTACAACAGATTGACATGGTGGGAGCAGATTGATAACGGAAAGCAGCTTACCCGCAACCGAAAATTCTTGACTGTTGTTCCTGTGGTGCTGTAAGTTATCTATTATATTACGAAACCTAAGTACTAAATAATTCTGAATCAAATTTTAGACTGCTTTTATTTGAGTTGTTTTTTGTTGTTTTATTTTCCTGAACTCATGAATTTGAGTGAGAGTTTTAAGGATGTCTTACTCATACTTTACGTGTTTTTGACAGCCAATGTTTTCTATGTTCTCTTCTATATTGTTGTGTGATATTTCTCTGATATGTATAAATCATCTTCATAGTTCTTCTGATGATTGATTGGAGAGTTCTGTTGACTCAATGACCTCTTTTTTCTAACTCAAAATCTCCAGGCTTGTGATTCTAGGGATTATTACCTAAACTTACAAATTTTTTAGTTGGCGAACTTGAGAGCTATGGCGGTAGACACTGATCTTAAGAGCCTCTAAATGATAAGATGATGGTTGTTGCTGCAAAATTTTGAATACGATGACATTGGCAAATCGTCGTATTTTCCTAGTGGCGGTGGAAAACCAAACTAGGCCAACAAAGCTGAACCGAACGAAATGGGCTGTGTTTTTTGTGTTTTGTTTTGTTGGGCATTTTAACAGTTCTTCTCATGAACTTGGCCTTCGTCGGATTTTTGCTTACTAATTTCATTTTTTGTCCCAGATCCAATCCATAAGTACGGATCCAGGGCCTTATAAATGTGTACCCTAGAACTTGAACATCAAACTTGTTGGAGTTTAATCAGTCTTAGCTACAGCATAAATTCGAAGTCTTACAAGTGGTAACTGGAAAGAACTATTGAACATGAACTTAGGGACAGACTGAGAGGATTGAGAGATGACAATTGAATTGTGATCAAGGGAAAAGATGAGGGATGATAAGGATAGTGCTTGGGTTGTACTACTTCGCTTATGAGTTTCATGGCGATCAATGTATGTATCTCATTATCCTAACTTGACACGATGTTCAACTTGCTACCATATGTAAGGCACCCTGAAAAGCCTGAGAGTATTGGGAGGGAGAGTTGCATCGTACCGTGGGTGGGCTCTATGAGGGAGAGTTTCTCGACTTCTAATTAGAAATGAAAAAAAAACGTCGGGCACCATGGGTGGACTCTAGACTCTCTGCTTAGAGTAGTGTTCTCGAGACATTTATAGATCTCTAGTTCCAAAGACCTCTAAAGTTTAGAATTGTTGGAATCAGGAGAGATATATCTGAATTTTCAATTTTTCTGGAACACGTTTGGATCGAAAGATGTACGAGTGGAATATTCGAGGTTTCTTTCATAACCAATAGGAGGATAAATTGGTGTGCATCTAGACTTGTCTAATGCTACATCTCACAACAGAAACATTCTTAATAGTTCTTTTGAATTCTTGCTCTTGAGGACATTGGTTGTACAGACATTATCCAAAGAAGGAAATGTCATTACTGTACTTTACGTAATTGTCGTTGTCTGTATTAGAGACTCGGAATCTCGAGATCTACTTTTCTTGCATGTTTCTTGACTTAAATCCTTACTGGGGTTCCTTTTGGACACATTTTCATTGCTCATTGGTGTGCCCCTCTTTCAGCTCTTTCAGGATTAGCTCAGTTCTTATTGTTTAATACTGGTTCTATTTGAGTAACTCTATTATCTTTGAGTTTTCATTTTCGCTTCAGATTCATGGTTGCTCTTTTATACTGGTTTGACATTGCTAAAGCCGTACGCATATATGTTCTTTTTTTATAAGAGTCTATGATCTATGATGCTTACAAACGACCTTCCCAATTTACCACGAGAGAGGTATGGCTATAGGAAGCAAAAATATTAGATAATTTACTGGTAAACAACATTGTACCTAGGATGAGTCTGTGTTTTCTTCGTGAGTACTCTTTTGACCATAATGAGGATTGTCCGTGGCCAAACTTTTGCATTCTTTAAAGAGTGGTACGTTAAGACTATATCCAATAACTCCTTTACCTCTCTACAAAACCAATTGCCTATACGGCGGATAAATATGTCCATTGATCCACTCATAGGAGAGAGAGATCACCGGGGTCTTCGAGGCCATTCTTACAAAGACCATGTCAACTAGACTAAGATCATCAGGGTCTTTGAGGCCATTCGTACAAAGACCAACTAGACTAAGATCATCAGGGTCTTCGAGGCCATACGTATAAAGACCAACTAGACTAAGATCATGAGGGTCTTTGAGTTGATTTGTACAAAGACCATGTCAACTAGACTAAGATCATGAGGGTCTTTGAGTTCATTCGTACAAGGACCATGTCAACTAGACTAAGATCATGAGGGTCTTTGAGTTGATTCGTACAAGGACCATGTCAACTAGACTAAGATCATGAGGGTCTTTGAGTTGATTCGTACAAGGACCATGTCAACTAGACTAAGATCATGAGGGTCTTTGAGTTGATTCGTACAAGGACCATGTCAACTAGACTAAGATCATGAGGGTCTTTGAGTTGATTCGTACAAGGACCATGTCAACTAGACTAAGATCATGAGGGTCTTTGAGTTGATTCGTACAAGGACCATGTCAACTAGACTAAGATCATGAGGGTCTTTGAGTTGATTCGTACAAGGACCATGTCAACTAGACTAAGATCATGAGGGTCTTTGAGTTGATTCGTACAAGGACCATGTCAACTAGACTAAGATCATGAGGGTCTTTGAGTTGATTCGTACAAGGACCATGTCAACTAGACTAAGATCATGAGGGTCTTTGAGTTGATTCGTACAAGGACCATGTCAACTAGACTAAGATCATGAGGGTCTTTGAGTTGATTCGTGCAAGGACCATGTCAACTAGACTAAGATCATGAGGATCTTTGAGTTCATTCGTACAAGGACCATGTCAACTAGACTAAGATCATGAGGGTCTTTGAGTTCATTCGTACAAGGACCATGTCAACTAGACTAAGATCATGAGGGTCTTTGAGTTCATTCGTACAAGGACCATGTCAACTAGACTAAGATCATGAGGGTCTTTGAGTTGATTCGTACAAGGACCATGTCAACTAGACTAAGATCATGAGGGTCTTTGAGTTCATTCGTACAAGGACCATGTCAACTAGACTAAGATCATGAGGGTCTTTGAGTTGATTCGTACAAAGACCATGTCAACTAGACTAAGATCATGAGGGTCTTTGAGTTCATTCGTACAAAAACCATGTCAACTAGACTAAGATCATCGGGTCTTCGAGGTCATTCGTACGAAGACCATGTCAACTAGACTAAGGGAAGGCATAGGGTCCTCCATGTTAATACCACCCGAACTCAGCGACCCTATAACAAGTTTGCACCTTTTAGAGATTGAGATTTTCCGAAGGTTCTTGCTATATTGAACTTCTTATTGTCTTCGCTCCTTTCCCGGCAAACAAATTACATAGGTAAGAGGAAGGACAACTAAGAGTTGATAACTATTGCATATTCTTGTAACGTAACAACTTATTTATCGTTAAAAGAGAAGAAATGTATGAAATCCGGAACCTTTGGCTCTACTCTATTATCCGACCTTCCCTTGTGATTTGAAATGAACAAAAAGAAAACTTCATTAACTTGTTCTTCTTATTGTACAGGTACTTGATAGCCTCACACACAACTGACTATCAACATCCAATGTTATTTCTCAACACCCTAGCAGTAATCGTACTAGTTATTGCCAAGTTCCCTCATATGCACAAGGTACGCATCTTCGGGATCAACGCAGACAAGTGAAGGTCTCACATGAAGAGATTTTCGGTTTGACTTGCCCAAAACGCTTCTGGTTCGTCTCTCAACCTGGTAAAACGTTATACCTTTGTATAGTAGTTGGGACAGGAAGGATACTGAAAAATTCGTAGTTTTCTTTTTTTGTACCGACTGCTCGCTCCCTCCGCTTGTTGCTCAATGAATTTAAGTAAATCCAATTATCTTTTCTACAGTGGAGAAATGTTGATGCATTTGAGTTTCACTGTTGTTATTATAAAGTAATTTTTAGGACTACACACTTGAATGGTTCTTGGGTTGGTTCTTCTGCACACAAGAACTCCACCTGCTGGGGACTCACATTCTTACTCTGTTCTTATACATCTCTCATAAATATGAACCTTGATTTTCAGCTCTCA GGTGGGTAAGGGTTAGTGCTTTCTTATTATTATCATCAGAGCTTGATTCCCAATTTTAAGCTCTGTTCTTCGATCATTGCCCAACCCCACGAACGAAAGAAACCATACCTAGATAAAAGCCATCTGGGTTTCCTTTCTAATATTTGAACTATTAACCACGCCATCAATCGCTGCGATTTGATTTGCAAATTCCGTTCTTTTTCTTAGTTGATTCCGTAGGAGAGGTTGGATTTTTTCGCATCACCGGTGTTTCGGAGCAAAATCAGAATCTGGGTTGATGGCTAATCTCTATGTCAAGGCTATGCCTCCGGCGGATCTGAATAGGAACACGGAATGGTTTCTTTATCCTGGTGTTTGGACGACTTATATTCTCATTTTGTTCTTCACTTGGCTTCTCGTTCTCTCTGTATTTGGCTGCTCTCCTGGAATGGCCTGGACCATCGTCAATCTATCTCATTTTGCTGTCACTTACCACTGCTTCCATTGGAAGAAAGGGACACCATTTGCTGAAGACCAAGGGATCTACAACAGATTGACATGGTGGGAGCAGATTGATAACGGAAAGCAGCTTACCCGCAACCGAAAATTCTTGACTGTTGTTCCTGTGGTGCTGTACTTGATAGCCTCACACACAACTGACTATCAACATCCAATGTTATTTCTCAACACCCTAGCAGTAATCGTACTAGTTATTGCCAAGTTCCCTCATATGCACAAGGTACGCATCTTCGGGATCAACGCAGACAAGTGAAGGTCTCACATGAAGAGATTTTCGGTTTGACTTGCCCAAAACGCTTCTGGTTCGTCTCTCAACCTGGTAAAACGTTATACCTTTGTATAGTAGTTGGGACAGGAAGGATACTGAAAAATTCGTAGTTTTCTTTTTTTGTACCGACTGCTCGCTCCCTCCGCTTGTTGCTCAATGAATTTAAGTAAATCCAATTATCTTTTCTACAGTGGAGAAATGTTGATGCATTTGAGTTTCACTGTTGTTATTATAAAGTAATTTTTAGGACTACACACTTGAATGGTTCTTGGGTTGGTTCTTCTGCACACAAGAACTCCACCTGCTGGGGACTCACATTCTTACTCTGTTCTTATACATCTCTCATAAATATGAACCTTGATTTTCAGCTCTCA ATGGCTAATCTCTATGTCAAGGCTATGCCTCCGGCGGATCTGAATAGGAACACGGAATGGTTTCTTTATCCTGGTGTTTGGACGACTTATATTCTCATTTTGTTCTTCACTTGGCTTCTCGTTCTCTCTGTATTTGGCTGCTCTCCTGGAATGGCCTGGACCATCGTCAATCTATCTCATTTTGCTGTCACTTACCACTGCTTCCATTGGAAGAAAGGGACACCATTTGCTGAAGACCAAGGGATCTACAACAGATTGACATGGTGGGAGCAGATTGATAACGGAAAGCAGCTTACCCGCAACCGAAAATTCTTGACTGTTGTTCCTGTGGTGCTGTACTTGATAGCCTCACACACAACTGACTATCAACATCCAATGTTATTTCTCAACACCCTAGCAGTAATCGTACTAGTTATTGCCAAGTTCCCTCATATGCACAAGGTACGCATCTTCGGGATCAACGCAGACAAGTGA
BLAST of CmoCh06G010280 vs. Swiss-Prot
Match: YBA9_SCHPO (Uncharacterized protein C119.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC119.09c PE=2 SV=3) HSP 1 Score: 121.3 bits (303), Expect = 9.3e-27 Identity = 56/139 (40.29%), Postives = 88/139 (63.31%), Query Frame = 1
BLAST of CmoCh06G010280 vs. Swiss-Prot
Match: ORML1_MOUSE (ORM1-like protein 1 OS=Mus musculus GN=Ormdl1 PE=2 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.5e-24 Identity = 61/144 (42.36%), Postives = 85/144 (59.03%), Query Frame = 1
BLAST of CmoCh06G010280 vs. Swiss-Prot
Match: ORML3_MOUSE (ORM1-like protein 3 OS=Mus musculus GN=Ormdl3 PE=2 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.5e-24 Identity = 60/144 (41.67%), Postives = 85/144 (59.03%), Query Frame = 1
BLAST of CmoCh06G010280 vs. Swiss-Prot
Match: ORML3_RAT (ORM1-like protein 3 OS=Rattus norvegicus GN=Ormdl3 PE=2 SV=2) HSP 1 Score: 113.2 bits (282), Expect = 2.5e-24 Identity = 60/144 (41.67%), Postives = 85/144 (59.03%), Query Frame = 1
BLAST of CmoCh06G010280 vs. Swiss-Prot
Match: ORML3_AILME (ORM1-like protein 3 OS=Ailuropoda melanoleuca GN=ORMDL3 PE=3 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 3.3e-24 Identity = 60/144 (41.67%), Postives = 85/144 (59.03%), Query Frame = 1
BLAST of CmoCh06G010280 vs. TrEMBL
Match: A0A0A0L3T2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119410 PE=4 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 6.2e-86 Identity = 151/157 (96.18%), Postives = 154/157 (98.09%), Query Frame = 1
BLAST of CmoCh06G010280 vs. TrEMBL
Match: A0A061DTH4_THECC (ORMDL family protein OS=Theobroma cacao GN=TCM_005108 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 4.4e-84 Identity = 148/157 (94.27%), Postives = 154/157 (98.09%), Query Frame = 1
BLAST of CmoCh06G010280 vs. TrEMBL
Match: A0A0B0MEV4_GOSAR (ORM1-like protein 1 OS=Gossypium arboreum GN=F383_12486 PE=4 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 2.2e-83 Identity = 146/157 (92.99%), Postives = 153/157 (97.45%), Query Frame = 1
BLAST of CmoCh06G010280 vs. TrEMBL
Match: A0A0D2QQY6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G153200 PE=4 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 3.7e-83 Identity = 145/157 (92.36%), Postives = 153/157 (97.45%), Query Frame = 1
BLAST of CmoCh06G010280 vs. TrEMBL
Match: A0A151SIV3_CAJCA (ORM1-like protein 1 OS=Cajanus cajan GN=KK1_000856 PE=4 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 4.9e-83 Identity = 144/157 (91.72%), Postives = 154/157 (98.09%), Query Frame = 1
BLAST of CmoCh06G010280 vs. TAIR10
Match: AT1G01230.1 (AT1G01230.1 ORMDL family protein) HSP 1 Score: 295.4 bits (755), Expect = 2.0e-80 Identity = 133/157 (84.71%), Postives = 148/157 (94.27%), Query Frame = 1
BLAST of CmoCh06G010280 vs. TAIR10
Match: AT5G42000.1 (AT5G42000.1 ORMDL family protein) HSP 1 Score: 294.7 bits (753), Expect = 3.5e-80 Identity = 132/154 (85.71%), Postives = 145/154 (94.16%), Query Frame = 1
BLAST of CmoCh06G010280 vs. NCBI nr
Match: gi|659074917|ref|XP_008437865.1| (PREDICTED: ORM1-like protein 3 [Cucumis melo]) HSP 1 Score: 326.2 bits (835), Expect = 3.0e-86 Identity = 152/157 (96.82%), Postives = 155/157 (98.73%), Query Frame = 1
BLAST of CmoCh06G010280 vs. NCBI nr
Match: gi|449432032|ref|XP_004133804.1| (PREDICTED: ORM1-like protein 3 [Cucumis sativus]) HSP 1 Score: 324.7 bits (831), Expect = 8.8e-86 Identity = 151/157 (96.18%), Postives = 154/157 (98.09%), Query Frame = 1
BLAST of CmoCh06G010280 vs. NCBI nr
Match: gi|590721036|ref|XP_007051495.1| (ORMDL family protein [Theobroma cacao]) HSP 1 Score: 318.5 bits (815), Expect = 6.3e-84 Identity = 148/157 (94.27%), Postives = 154/157 (98.09%), Query Frame = 1
BLAST of CmoCh06G010280 vs. NCBI nr
Match: gi|728807250|gb|KHF97455.1| (ORM1-like protein 1 [Gossypium arboreum]) HSP 1 Score: 316.2 bits (809), Expect = 3.1e-83 Identity = 146/157 (92.99%), Postives = 153/157 (97.45%), Query Frame = 1
BLAST of CmoCh06G010280 vs. NCBI nr
Match: gi|823124597|ref|XP_012480902.1| (PREDICTED: ORM1-like protein 2 [Gossypium raimondii]) HSP 1 Score: 315.5 bits (807), Expect = 5.4e-83 Identity = 145/157 (92.36%), Postives = 153/157 (97.45%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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