ClCG05G000680 (gene) Watermelon (Charleston Gray)

Overview
NameClCG05G000680
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionORM1-like protein 2
LocationCG_Chr05 : 776378 .. 783523 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCTCTGTTTTTCGATCATTGGCCCAACCCCACGAAGAAACCATACCTAGAAAAGCTATCTGGGTTTCGTTTGTAATTTTTGAACTACTGAGCACGCGATCAATCGCTGCAATCTGTTTCCAAAATTTGATCATTTTTCTTCTCACTCAAATCCCAAAGGAGGGTTGGAAATTTGGAATTAGTGTATCCCAACAAAATCAGAATCTGGGTCGATGGCTAATCTCTATGTCAAGGCTGTACCTCCGGCGGATCTGAATAGGAACACAGAATGGTTTATGTATCCCGGTGTTTGGACAACCTATATTCTCATTCTCTTCTTCGCTTGGCTTCTCGTCCTCTCTGTATTTGGCTGCTCTCCTGGCATGGCTTGGACCGTCGTCAATCTATCTCATTTCGCTGTATGTGCATCCATATTTCTTCGTTTTTTCTGTCTTTTTTGATCTGGGTTTTTATTGCCTTCCTATGATTTCATCATTTTGTGTGAGATTGTTGTTGACTTGTGCAATTCATTTATTTGGTTTTTCTGCGGCTTGGTTTTGGTGTTCTGTATTGTTTTGTGCTGCTTTAGTCTTCTTCAATTTAATCTTTTTGTGGATGCTGGGAGAGATTGCATTTGGTTGATTTTGTCTAAACAAAACAAAGACAGCCAAGCCAACTGTTGTGGCTTTGTGATTTCGGTTTCGTATTTATGCTTGCTTTGATAATTATATGCTTATTGAACTTGCATGTAAGTAATTTTGTAACGGAAGAGATTCTTTTCTTATGTTCGATTTCTACTGTTTCAGATGTTCATCTTCGGATTCTTGTGTAGGTATGGTAGATAGATATTCCATTATCTTTGATTTCATAACCTTTTTCCATGATTGTTATATTTCAAGCCTCGAGCTATTGATCCTCTTAGGCTGTTCCTTAGTTTAGTGGCACTAAAATTGTTTGCGGAAGAAATGGGTGAAATGCTATTAGAGATGTTTGAAAAGATCATATGCTTTTCGGTTTTATGTTTGATGTATTGCCAAACGTGTTGTTTATGTGTAAATGTGGATCTTTCTGGACTAAGTGGCAGTGAACTCTGTTTACTATTGGCTCGGACATGCCTACTTTAAATATAGCCAGTGATGAGCTTAGAATGATTTGAAACGTTCTTTTGCTTCATTCTTTGAAGTTGATATGCTCTATGAAAGATATAAAATGATGGAAAGGAGCTTGTCTTTTACTTCAGGTCACTTACCACTTCTTCCATTGGAAGAAAGGCACGCCATTTGCTGAAGACCAGGGGATCTACAACAGGTTGACGTGGTGGGAGCAGATTGATAATGGAAAGCAGCTTACCCGCAACAGAAAATTCTTGACCGTTGTTCCCGTGGTGCTGTAAGTTGTTTATTATACAAGCCAACCTATGTACTATTATTTAACAAATCATATTTCAAAACTGCTTTTATATGAGTTGTTCTTTGTTGTTTTATTTTACTGAACTCCTAAATTTGAGTGGCCTATAGGACATCCTGCTCATACATTGCATATCTTTCACAGTCAATATTTTTCTATGTTCTATTCTATGTTGCTGTGTGATTTTGTTTTTCAGCGTTCATCTTCATAGGTCTTCTGATGATGGATTGGAGAATTCTGTTGAAGCCTTTTGAATTGAACTCAAAATCTTTAGGCTTGTAATTCTAGGGATTATTTCCTAAGCTTACAAATTTTCTTGTTGGCGAACTTCTGAGATATGGCTTAGGTGGACACTGTTCTTATTTCTTAACAGGCTTTGAATGCAAGAATTCTTGATTGATTTTTAGGGTCTCCATTTCTTTTTCCAGTATGTGAGATTTGCTGTATAATTTTCTAATTGGTCCTCTTAAAGCGACTATGATATATTTCACTTCATTAAAAAATTTGGATCCTGCTTCCCTATTCTTATCTTTCATTGTAATTTTTACTATTACTTTGGGAGGATAGTGATAACTGATAAGAAGATGGCTGGTGCTATAAACTTTTGAATGCTTCGGTATTTGCATATCTTCATATTTTCATTAGAGAATGTAGTGGGGGAGATTGGTTCGCTTTTTAGTTGGAAACCAAACTGGGCCAGCAAAGTTGAACTAAACAAAGTGGGTTATGCTCTGTTTTTTATGGCTTGTGGGGTTGTGTGCGATTAGTTGGGCTTTGTGGGAAGAGAAGAAAGGAGGGTGTTTAGAGGTTTGGGATCCTATAGAGACTTGGTCCCTCATTCGCTTTCATCCCTCTTTGTGGGTTTCGATTTCGATGACCTTTTGTAACTATTCTATAGGTACTATTTTGCATAGTCGGAGCCCTTTTCTATAGAGGGTGCTTCCTTTTATGTGGGTTTCTTTTATGCCCATGTCTTCTTTCATTTTTCTCAATGAAAGTTGTTTTCATTAAAAAAAAAAAAAAAAAAAAGTGGGTTATGCCATTTTGTTTCATTGTGTATTTTAACCGTTCAATGGGATTGAGATTTGAACTTCTAACCTTTTGGTTGAGAATATGTGTCCTAACCAGATAATTATGTTCGGGTTGGCAGTATTTTAAGAATTATTGTCATGAGCTTGGCTTTATCAATTTATTGCCCATTAGTTACATTTTCTCCCAGATCCAATCCCTAAAAAATCAATTCAGTTCTCCAACTCTAAACTAGGGCCTAATAAATGCTACAATTTCCTTTAACCTAGTAAATCTTGGAAACTAGACATCTTACTTGTTGGAGTGCAGTAAGTCCTAGTTACAACATAGATTCGAAGTTTACAAGTGTAATCTGAAAGAACTGTTGAACATGAATTTATGGAGAAATTGATAGGACCGAGATTGACAAGTGAATCAAATGATTAAGGAAAAGGATGGGGGGCGTGAAGGATAATAATGCTTGAGTGGTTGTACTACTTCGCTTATGAGCCACCTCTCCTCTCCTAACTTGAGACGACGTTCAACTTACTACCTTATTTAAGGCAGTTTGAAAAGCCCAAGAGTCAATTGGAAGGCTGAAGTGCATCGTACCAAAAATTACTTACGGAACCTTGTTTGTTGTTGACTAAACGAGAGGGGAAGGTGCTAAATAGTAAAATGTGTTAGCTTTGGGCATCATTGGCGGGCTCTACACCTTGTGCTAAGAAGTGATTCTCCTAAGACATTTTTAAACCTCTAGCTCTTAAGACCTCTTCAATTGAGGATTGTTGTAAATTAGGAGAGGTATGGGTGTGTGTTTTTAAATTTCTTTTTTTCAATAGAAAAATTTAATATTCATAGAAAAATTTAATAAATAGCATAAATATTTAATATTTTATTTTTAACTTAGTTTTTAAATCTTCAAATAATATATTTTATTTTAAAATTAGACATTAGTCGAGCTTTAGATAACTTAGTTATCTCGTTACACAAACAATTCTTTGCAGGGAGCTATTTTGAAAAGGCACTCCAAAGAAGATTTAATTCTTCCCTTGAACTCTTGCTCTTGGGGGAATTGGTCCTACAGACATTATTTAAAGAAGGAATCGTCACTGCTATACATTGCTACTTAACAGCTAACTGTTGTTCTTTGTCTTAGAGATTCAGAATCTCAAGATTATCTTTTCTTACATTTCCCTTATGATGGTGCATTTTGGACACATTCATTGTTCGGTGTGCTCCTCCTATTTCCCTCTTCTAGGCCTTACTCAATTTTGTTTGTCCGGAATTTCAAACAAAAAGGGAAGGTGCTATGAACTTTTTCCATTGAAAATCTTCTTTGGGAAATTTGGATGTAAAGAAACAATTTAAATTTCAAAACGTTTGTAGAGGGTTCTAGAGGTGTGGTAGCTGACTCAATTTAGAGCCTGCTTCTGCTGTCCTTTTAATAATTTTTTTTTTTGTTAGTTATGATTTTTTTCCTAATATAAGTTTATGATTCTTTCTCTATCAACTTGTGTTGGAAGTGCTTTTTTTTCCCTATAACCTAGTTGGTTCCAGGTGGGTTGACATCTAGTTACTTCTGTTACAAGCCTTCTTCCTTTGGATGAAAGTCATTGCTGTGTCCCTATATTTATTATTTCCTTTCCTTTCCTCTTCCCCCTCCCATACGTTCTTCAAATGATACTCAAATCTTACAGAGGCCTTTCTTGGGTATTCTATATGTTCAATGTTGATAGTTCTTATTATTTTAACTAGTTTTTTTCAGGTTTCATATAAAAAGAAAAAAGAAAAAAAGAAAAAAATATTTTATACTGGTTCCATTCAAGTAACTTTTATTCTGAGATTTTATTCTTGATGGCTCTTTTATACTGGTTTGACTTTGCTAAACGCATACACATATTGACGATGTGCAACAAATTTTTCTGCTTGTTGGGAGGGCATTGGCAGGACAATCTGGTGTTTTCTTATTTTTAAATCAGAGTGTGCTTGGGGTTGGTGATATTAAGTAGATCCATCTTCTTTCATTCTTTCAATGCTTGTTATCAACTTGAGAATATCTCTGGATCTCAACCCAAAGGATTGAGGTTCCACACCCATATGTTATTAAATACGAGGAAAAAATAAATAAATAAATAACCCCTCTTCTAATGCTCGTTGGATTGTCCTACTCCGCTTCAACCAGTCAAAAAACATTACAAAATTTCATACTGAATTTATAAAGATGATAAAATATGAACTTTTCTTCAAGCCCTGTTTCTCATAATGTATGTATTTGGATCTCCTTTTGATAGGAAACGAATTCCATTACCATGTATGAAATTACGGACAAAAAGCCTCAAATAGGCTGGGGATTTAAAAACGGCCGCCAGCTTACCAAACTATGCTCAATGAGTTATCACGAAAGGACTTTACCGGACTCCCACTTTATTTGAGTATTTCCCACCAAATACTCTATTTGGTCCCTAACTAGGTTCTATGTTTCTCTCTAGGCGTTAGTGTCAAATACTTTTGTAATTATATTTAGGTCTTTATGTTACTTGATTTCCTGTTTGGATGCCTTGTGTTCAGTCATTACATCTTGTTGAAAGTGTGGTTCATCATAGGAAAAAAAAGAAAAAGCATGCCTTGTGTTCAGTCATTACCTCTTGTTGAAAGTGTGGTTCATCATAGGAAAAAAAAGAAAAAGCAAAAGGAATTTGTTAGGAACCAAGGTAGTATGGGCTACCTTTGTCCCACATCGGTTAGAATGAGATGACCAATGTGGTACTTTAGTGGCTTGGCTCTCTCACCTTAATAGCTGGCTTTTGGGGTGTAGTTCTCCATGGTGCTTAAGTACCTTAAAATGGTATCAAAGTCGGTTGTCAACCTTCTAGGGAGGAGCACTAGCGGAGGTTTTGATTGGGTGTTTCCGAGTGAAGTACCATTAGTTTAGCCGCTAAGACGTCAACTTTCTAGGGATGGGGTATTGTTAGGAACCAAGGTAGTATGGGCTACTTTTGTCGCACGTCGGTTAGAATGGGATGACCATTGTGGTATTTAAGTGGCTTGGCTTTCTCACCCAATAGCTAGCTTTTAGGATGTGGTTCTCTAAGGTGCTTAAGTACCTAACAGAATCCTTGGTGAGTGTTAGTAAATATGATGTGGAATTCAATTTTCGGATTGTTTTGGAGCAAGATAAAATTTTATCTGTTGATGCTATTGACGGGTCCTTACTAAGCCTCTTAAAAAGATTCTCTCTCTTCTTCAAAGAGTTTGTTGGATGATAAAAAGTCATTTTCTTTCTTTATAAAGGTTTGTGGCCTTGAGGTTTAAGAGATAAAAGCCTAGGACGTCTTTGAAGTTTTTGCCCTTGGGATTTCAAAGTTTCTTTTGGCAGTCCTTCCGTGTGGATTTTTCTTGCGGCTTGTTTGTGGAAAGAGATCTTTTGGTGGTTCTTCCATGCTTGGCATTTTTTTGGCTCAATGTGCTTTCAGATTCGTGGTAGTATTTTCTTTTTAAAAAGAAATGGCAAAGGATTTGGCCATGGGAAGAGAAAAACAGCTTCCAACAACTTTTCTGCATTTCTTTTGGAATAGTTGAAAATTCTATTGCTCCTCTCTAACCTCGATGCCCACGAAACTGTACAAAAACCATTAAAATTGTGGCCATAGAAACATTAGAACAAAAACAACAGCCTGTACCTTGGAGAAGTTATGTTTACTGATCCACGCATGGGAACAAGAGAGACCATTAGGGTGGAGTCTGTTCTCTTGATGAGGAAAATACGCAAGATTATTTGTATAGTTTAGGTGTTAATTTAGATTAATTAGTTAATTCTCTTATTTTCTTGTAAGGTTATAGATAGCCACATCAAGGGATGAATTTCTCTTGTTTGGCCATGGACTTGGCTTAATACCTTGAACTGTTGCATCATCCTACTTCTGAGGACCATACCAACTAGACTTGGGAAAGATATAGGGTCTTCCAATTTTCGTCTCGACTCTTGAGTGTCCATGCGGCCCAAACTCAGCAACTATATAACAAATTTGCACCTTTTAGATATCAAAATTTTCTAGAGGAGATCTTGCTATATGGAGGCTACAGATATGAAACTCATGTCAGGAAATAGAAGTGTTTCAATCCGAATGACTGGCCTGAACCTTTGAAATCTCTTTTCCTTCGGTACTTTTAATATGTTCATGCTTAAAGATGCAAAATCGAGTATGTTTGTTTCTTTGAATGCTTCGGTGAATAAGTGTGTACTTGCGTTCCTCAGTGTAATCAGAGCTTTCAAGCTATTACACATACCAAGAATGCTTTGCTAACTATATCTACTTTAGTCACAAAATCATCAAAAAGAAAACTTCACTCAATTTGTTTTTGCTTATTCTACAGGTACTTGATAGCCTCACACACAACTGACTATCAACACCCAATGTTATTTCTTAACACTCTTGCAGTAATTGTACTAGTTATTGCGAAGTTTCCCCATATGCACAAGGTACGTATCTTCGGAATCAATGCTGACAAGTGAAGCTCACATCAGGAGATTTTCGGTTTGACTTGCCAAAAAGCTTCTCGTCCTTCTCTCAATCTGGTAAAATGTTATATCTCTGTATAGTAGTTGGGACCGGAAGGATACTGAAAAATTTGTAGTTTTTTTTCTTTCTTTTTTTTCTTTTTTTCTTTTCCTTTTTTGTACCGACTGCTTGTTCCACCTGTTGCTTAATGAATAAGTAAATGCAATTATCTTTTATACAGTAGAGAAA

mRNA sequence

AAGCTCTGTTTTTCGATCATTGGCCCAACCCCACGAAGAAACCATACCTAGAAAAGCTATCTGGGTTTCGTTTGTAATTTTTGAACTACTGAGCACGCGATCAATCGCTGCAATCTGTTTCCAAAATTTGATCATTTTTCTTCTCACTCAAATCCCAAAGGAGGGTTGGAAATTTGGAATTAGTGTATCCCAACAAAATCAGAATCTGGGTCGATGGCTAATCTCTATGTCAAGGCTGTACCTCCGGCGGATCTGAATAGGAACACAGAATGGTTTATGTATCCCGGTGTTTGGACAACCTATATTCTCATTCTCTTCTTCGCTTGGCTTCTCGTCCTCTCTGTATTTGGCTGCTCTCCTGGCATGGCTTGGACCGTCGTCAATCTATCTCATTTCGCTGTCACTTACCACTTCTTCCATTGGAAGAAAGGCACGCCATTTGCTGAAGACCAGGGGATCTACAACAGGTTGACGTGGTGGGAGCAGATTGATAATGGAAAGCAGCTTACCCGCAACAGAAAATTCTTGACCGTTGTTCCCGTGGTGCTGTACTTGATAGCCTCACACACAACTGACTATCAACACCCAATGTTATTTCTTAACACTCTTGCAGTAATTGTACTAGTTATTGCGAAGTTTCCCCATATGCACAAGGTACGTATCTTCGGAATCAATGCTGACAAGTGAAGCTCACATCAGGAGATTTTCGGTTTGACTTGCCAAAAAGCTTCTCGTCCTTCTCTCAATCTGGTAAAATGTTATATCTCTGTATAGTAGTTGGGACCGGAAGGATACTGAAAAATTTGTAGTTTTTTTTCTTTCTTTTTTTTCTTTTTTTCTTTTCCTTTTTTGTACCGACTGCTTGTTCCACCTGTTGCTTAATGAATAAGTAAATGCAATTATCTTTTATACAGTAGAGAAA

Coding sequence (CDS)

ATGGCTAATCTCTATGTCAAGGCTGTACCTCCGGCGGATCTGAATAGGAACACAGAATGGTTTATGTATCCCGGTGTTTGGACAACCTATATTCTCATTCTCTTCTTCGCTTGGCTTCTCGTCCTCTCTGTATTTGGCTGCTCTCCTGGCATGGCTTGGACCGTCGTCAATCTATCTCATTTCGCTGTCACTTACCACTTCTTCCATTGGAAGAAAGGCACGCCATTTGCTGAAGACCAGGGGATCTACAACAGGTTGACGTGGTGGGAGCAGATTGATAATGGAAAGCAGCTTACCCGCAACAGAAAATTCTTGACCGTTGTTCCCGTGGTGCTGTACTTGATAGCCTCACACACAACTGACTATCAACACCCAATGTTATTTCTTAACACTCTTGCAGTAATTGTACTAGTTATTGCGAAGTTTCCCCATATGCACAAGGTACGTATCTTCGGAATCAATGCTGACAAGTGA

Protein sequence

MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK
Homology
[Close]
BLAST of ClCG05G000680 vs. Swiss-Prot
Match: YBA9_SCHPO (Uncharacterized protein C119.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC119.09c PE=2 SV=3)

HSP 1 Score: 125.2 bits (313), Expect = 6.4e-28
Identity = 56/139 (40.29%), Postives = 86/139 (61.87%), Query Frame = 1 

Query: 15  NRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSHFAVTYHFFHWKKGT 74
           N N+ W  Y G W  +I+++    L+  ++   S  +AWT+ NL++ A ++  FHW  GT
Sbjct: 33  NYNSNWVNYKGAWVIHIVLIAALRLIFHAIPSVSRELAWTLTNLTYMAGSFIMFHWVTGT 92

Query: 75  PFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFLNTLAV 134
           PF  + G Y+RLT WEQ+D G Q T  RK+L V+P++L+L+++H T Y   M  +N  A+
Sbjct: 93  PFEFNGGAYDRLTMWEQLDEGNQYTPARKYLLVLPIILFLMSTHYTHYNGWMFLVNIWAL 152

Query: 135 IVLVIAKFPHMHKVRIFGI 154
            +++I K P +H+ RIFGI
Sbjct: 153 FMVLIPKLPAVHRKRIFGI 171

[Close]
BLAST of ClCG05G000680 vs. Swiss-Prot
Match: ORML1_MOUSE (ORM1-like protein 1 OS=Mus musculus GN=Ormdl1 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.6e-26
Identity = 63/147 (42.86%), Postives = 85/147 (57.82%), Query Frame = 1 

Query: 9   VPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSHFAVTYHFF 68
           V  +++N NT      G+W TY L +    +++LS+  CS  +AWT+ N+ H    Y F 
Sbjct: 5   VAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFCSVPVAWTLTNIIHNLGMYVFL 64

Query: 69  HWKKGTPF-AEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQHPML 128
           H  KGTPF   DQG    LT WEQ+D G Q T +RKF T+ P++LY +AS  T Y     
Sbjct: 65  HAVKGTPFETPDQGRARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYDPTHF 124

Query: 129 FLNTLAVIVLVIAKFPHMHKVRIFGIN 155
            LNT +++ ++I K P +H VRIFGIN
Sbjct: 125 ILNTASLLSVLIPKMPQLHGVRIFGIN 151

[Close]
BLAST of ClCG05G000680 vs. Swiss-Prot
Match: ORML3_MOUSE (ORM1-like protein 3 OS=Mus musculus GN=Ormdl3 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.1e-26
Identity = 61/144 (42.36%), Postives = 84/144 (58.33%), Query Frame = 1 

Query: 12  ADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSHFAVTYHFFHWK 71
           +++N NT      G+W +Y+L +    +++LS+   S  + WT+ NL H    Y F H  
Sbjct: 8   SEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNLGMYIFLHTV 67

Query: 72  KGTPF-AEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFLN 131
           KGTPF   DQG    LT WEQ+D G Q T +RKFLT+ P+VLY + S  T Y      LN
Sbjct: 68  KGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYDQVHFILN 127

Query: 132 TLAVIVLVIAKFPHMHKVRIFGIN 155
           T++++ ++I K P +H VRIFGIN
Sbjct: 128 TVSLMTVLIPKLPQLHGVRIFGIN 151

[Close]
BLAST of ClCG05G000680 vs. Swiss-Prot
Match: ORML3_RAT (ORM1-like protein 3 OS=Rattus norvegicus GN=Ormdl3 PE=2 SV=2)

HSP 1 Score: 119.4 bits (298), Expect = 3.5e-26
Identity = 61/144 (42.36%), Postives = 84/144 (58.33%), Query Frame = 1 

Query: 12  ADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSHFAVTYHFFHWK 71
           +++N NT      G+W +Y+L +    +++LS+   S  + WT+ NL H    Y F H  
Sbjct: 8   SEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNLGMYIFLHTV 67

Query: 72  KGTPF-AEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFLN 131
           KGTPF   DQG    LT WEQ+D G Q T +RKFLT+ P+VLY + S  T Y      LN
Sbjct: 68  KGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYDQVHFILN 127

Query: 132 TLAVIVLVIAKFPHMHKVRIFGIN 155
           T++++ ++I K P +H VRIFGIN
Sbjct: 128 TVSLMSVLIPKLPQLHGVRIFGIN 151

[Close]
BLAST of ClCG05G000680 vs. Swiss-Prot
Match: ORML3_BOVIN (ORM1-like protein 3 OS=Bos taurus GN=ORMDL3 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.6e-26
Identity = 61/144 (42.36%), Postives = 84/144 (58.33%), Query Frame = 1 

Query: 12  ADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSHFAVTYHFFHWK 71
           +++N NT      G+W +Y+L +    +++LS+   S  + WT+ NL H    Y F H  
Sbjct: 8   SEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGMYIFLHTV 67

Query: 72  KGTPF-AEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFLN 131
           KGTPF   DQG    LT WEQ+D G Q T +RKFLT+ P+VLY + S  T Y      LN
Sbjct: 68  KGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYDQIHFILN 127

Query: 132 TLAVIVLVIAKFPHMHKVRIFGIN 155
           T++++ ++I K P +H VRIFGIN
Sbjct: 128 TVSLMSVLIPKLPQLHGVRIFGIN 151

[Close]
BLAST of ClCG05G000680 vs. TrEMBL
Match: A0A0A0L3T2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119410 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.3e-88
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPP DLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH
Sbjct: 1   MANLYVKAVPPTDLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK
Sbjct: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 157

[Close]
BLAST of ClCG05G000680 vs. TrEMBL
Match: A0A061DTH4_THECC (ORMDL family protein OS=Theobroma cacao GN=TCM_005108 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 4.7e-86
Identity = 150/157 (95.54%), Postives = 155/157 (98.73%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFF+WLLVLS+FGCSPGMAWT+VNLSH
Sbjct: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFSWLLVLSIFGCSPGMAWTIVNLSH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           F VTYHFFHWKKGTPFAEDQGIYN LTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FLVTYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DYQHPMLFLNTLAV+VLVIAKFP+MHKVRIFGINADK
Sbjct: 121 DYQHPMLFLNTLAVLVLVIAKFPNMHKVRIFGINADK 157

[Close]
BLAST of ClCG05G000680 vs. TrEMBL
Match: A0A0D2QQY6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G153200 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 2.3e-85
Identity = 149/157 (94.90%), Postives = 154/157 (98.09%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFF+WLLVLS+FGCSPGMAWTVVNL+H
Sbjct: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFSWLLVLSIFGCSPGMAWTVVNLAH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           F VTYHFFHWKKGTPFAEDQGIYN LTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FLVTYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DYQHPMLF NTLAV+VLVIAKFP+MHKVRIFGINADK
Sbjct: 121 DYQHPMLFFNTLAVLVLVIAKFPNMHKVRIFGINADK 157

[Close]
BLAST of ClCG05G000680 vs. TrEMBL
Match: A0A0B0MEV4_GOSAR (ORM1-like protein 1 OS=Gossypium arboreum GN=F383_12486 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 5.2e-85
Identity = 148/157 (94.27%), Postives = 154/157 (98.09%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPPADLNRNTEWF+YPGVWTTYILILFF+WLLVLS+FGCSPGMAWTVVNL+H
Sbjct: 1   MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFSWLLVLSIFGCSPGMAWTVVNLAH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           F VTYHFFHWKKGTPFAEDQGIYN LTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FLVTYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DYQHPMLF NTLAV+VLVIAKFP+MHKVRIFGINADK
Sbjct: 121 DYQHPMLFFNTLAVLVLVIAKFPNMHKVRIFGINADK 157

[Close]
BLAST of ClCG05G000680 vs. TrEMBL
Match: A0A0D2SZN0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G126900 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 6.8e-85
Identity = 146/157 (92.99%), Postives = 154/157 (98.09%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPPADLNRNTEWFMYPGVWTTYIL LFF+WLLVLS+FGCSPGMAWT+VNL+H
Sbjct: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILFLFFSWLLVLSIFGCSPGMAWTIVNLAH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           F VTYHFFHWKKGTPFA+DQGIYN LTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FLVTYHFFHWKKGTPFADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DYQHPMLFLNTLAVI+LV+AKFP+MHKVRIFGINADK
Sbjct: 121 DYQHPMLFLNTLAVIILVVAKFPNMHKVRIFGINADK 157

[Close]
BLAST of ClCG05G000680 vs. TAIR10
Match: AT1G01230.1 (AT1G01230.1 ORMDL family protein)

HSP 1 Score: 300.1 bits (767), Expect = 8.2e-82
Identity = 136/157 (86.62%), Postives = 146/157 (92.99%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPP D+NRNTEWFMYPGVWTTY+LILFF WL+VLSV GCSPGMAWTVVNL+H
Sbjct: 1   MANLYVKAVPPPDMNRNTEWFMYPGVWTTYMLILFFGWLVVLSVSGCSPGMAWTVVNLAH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           F VTYH FHW KGTPFA+DQGIYN LTWWEQ+DNG+QLTRNRKFLT+VPVVLYLIASHTT
Sbjct: 61  FVVTYHSFHWMKGTPFADDQGIYNGLTWWEQMDNGQQLTRNRKFLTLVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DY+HP LFLNTLAV+VLV+AKFP+MHKVRIFGIN DK
Sbjct: 121 DYRHPWLFLNTLAVMVLVVAKFPNMHKVRIFGINGDK 157

[Close]
BLAST of ClCG05G000680 vs. TAIR10
Match: AT5G42000.1 (AT5G42000.1 ORMDL family protein)

HSP 1 Score: 295.4 bits (755), Expect = 2.0e-80
Identity = 131/154 (85.06%), Postives = 143/154 (92.86%), Query Frame = 1 

Query: 4   LYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSHFAV 63
           +YV+A+P  D+NRNTEWF YPGVWTTYILILFF+WLLVLSVF CSPG+AWT+V+L+HF V
Sbjct: 1   MYVRALPTTDVNRNTEWFTYPGVWTTYILILFFSWLLVLSVFHCSPGIAWTIVHLAHFTV 60

Query: 64  TYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQ 123
           TYH FHWKKGTPF +DQG+YNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQ
Sbjct: 61  TYHSFHWKKGTPFGDDQGVYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQ 120

Query: 124 HPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           HPMLFLNTLAV V+V+AKFPHMHKVRIFGIN D+
Sbjct: 121 HPMLFLNTLAVFVMVVAKFPHMHKVRIFGINGDQ 154

[Close]
BLAST of ClCG05G000680 vs. NCBI nr
Match: gi|659074917|ref|XP_008437865.1| (PREDICTED: ORM1-like protein 3 [Cucumis melo])

HSP 1 Score: 335.1 bits (858), Expect = 6.5e-89
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH
Sbjct: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK
Sbjct: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 157

[Close]
BLAST of ClCG05G000680 vs. NCBI nr
Match: gi|449432032|ref|XP_004133804.1| (PREDICTED: ORM1-like protein 3 [Cucumis sativus])

HSP 1 Score: 333.6 bits (854), Expect = 1.9e-88
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPP DLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH
Sbjct: 1   MANLYVKAVPPTDLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK
Sbjct: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 157

[Close]
BLAST of ClCG05G000680 vs. NCBI nr
Match: gi|590721036|ref|XP_007051495.1| (ORMDL family protein [Theobroma cacao])

HSP 1 Score: 325.1 bits (832), Expect = 6.8e-86
Identity = 150/157 (95.54%), Postives = 155/157 (98.73%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFF+WLLVLS+FGCSPGMAWT+VNLSH
Sbjct: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFSWLLVLSIFGCSPGMAWTIVNLSH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           F VTYHFFHWKKGTPFAEDQGIYN LTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FLVTYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DYQHPMLFLNTLAV+VLVIAKFP+MHKVRIFGINADK
Sbjct: 121 DYQHPMLFLNTLAVLVLVIAKFPNMHKVRIFGINADK 157

[Close]
BLAST of ClCG05G000680 vs. NCBI nr
Match: gi|823124597|ref|XP_012480902.1| (PREDICTED: ORM1-like protein 2 [Gossypium raimondii])

HSP 1 Score: 322.8 bits (826), Expect = 3.4e-85
Identity = 149/157 (94.90%), Postives = 154/157 (98.09%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFF+WLLVLS+FGCSPGMAWTVVNL+H
Sbjct: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFSWLLVLSIFGCSPGMAWTVVNLAH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           F VTYHFFHWKKGTPFAEDQGIYN LTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FLVTYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DYQHPMLF NTLAV+VLVIAKFP+MHKVRIFGINADK
Sbjct: 121 DYQHPMLFFNTLAVLVLVIAKFPNMHKVRIFGINADK 157

[Close]
BLAST of ClCG05G000680 vs. NCBI nr
Match: gi|728807250|gb|KHF97455.1| (ORM1-like protein 1 [Gossypium arboreum])

HSP 1 Score: 321.6 bits (823), Expect = 7.5e-85
Identity = 148/157 (94.27%), Postives = 154/157 (98.09%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPPADLNRNTEWF+YPGVWTTYILILFF+WLLVLS+FGCSPGMAWTVVNL+H
Sbjct: 1   MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFSWLLVLSIFGCSPGMAWTVVNLAH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           F VTYHFFHWKKGTPFAEDQGIYN LTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FLVTYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DYQHPMLF NTLAV+VLVIAKFP+MHKVRIFGINADK
Sbjct: 121 DYQHPMLFFNTLAVLVLVIAKFPNMHKVRIFGINADK 157

The following BLAST results are available for this feature:
BLAST of ClCG05G000680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YBA9_SCHPO6.4e-2840.29Uncharacterized protein C119.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC... [more]
ORML1_MOUSE1.6e-2642.86ORM1-like protein 1 OS=Mus musculus GN=Ormdl1 PE=2 SV=1[more]
ORML3_MOUSE2.1e-2642.36ORM1-like protein 3 OS=Mus musculus GN=Ormdl3 PE=2 SV=1[more]
ORML3_RAT3.5e-2642.36ORM1-like protein 3 OS=Rattus norvegicus GN=Ormdl3 PE=2 SV=2[more]
ORML3_BOVIN4.6e-2642.36ORM1-like protein 3 OS=Bos taurus GN=ORMDL3 PE=2 SV=1[more]
BLAST of ClCG05G000680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3T2_CUCSA1.3e-8899.36Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119410 PE=4 SV=1[more]
A0A061DTH4_THECC4.7e-8695.54ORMDL family protein OS=Theobroma cacao GN=TCM_005108 PE=4 SV=1[more]
A0A0D2QQY6_GOSRA2.3e-8594.90Uncharacterized protein OS=Gossypium raimondii GN=B456_001G153200 PE=4 SV=1[more]
A0A0B0MEV4_GOSAR5.2e-8594.27ORM1-like protein 1 OS=Gossypium arboreum GN=F383_12486 PE=4 SV=1[more]
A0A0D2SZN0_GOSRA6.8e-8592.99Uncharacterized protein OS=Gossypium raimondii GN=B456_008G126900 PE=4 SV=1[more]
BLAST of ClCG05G000680 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G01230.18.2e-8286.62 ORMDL family protein[more]
AT5G42000.12.0e-8085.06 ORMDL family protein[more]
BLAST of ClCG05G000680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074917|ref|XP_008437865.1|6.5e-89100.00PREDICTED: ORM1-like protein 3 [Cucumis melo][more]
gi|449432032|ref|XP_004133804.1|1.9e-8899.36PREDICTED: ORM1-like protein 3 [Cucumis sativus][more]
gi|590721036|ref|XP_007051495.1|6.8e-8695.54ORMDL family protein [Theobroma cacao][more]
gi|823124597|ref|XP_012480902.1|3.4e-8594.90PREDICTED: ORM1-like protein 2 [Gossypium raimondii][more]
gi|728807250|gb|KHF97455.1|7.5e-8594.27ORM1-like protein 1 [Gossypium arboreum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007203ORMDL
Vocabulary: Cellular Component
TermDefinition
GO:0005789endoplasmic reticulum membrane
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010286 heat acclimation
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G000680.1ClCG05G000680.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007203ORMDL familyPIRPIRSF018147ORM1coord: 3..157
score: 3.9
IPR007203ORMDL familyPANTHERPTHR12665ORMDL PROTEINScoord: 1..157
score: 8.7E
IPR007203ORMDL familyPFAMPF04061ORMDLcoord: 15..149
score: 5.7
NoneNo IPR availablePANTHERPTHR12665:SF14SUBFAMILY NOT NAMEDcoord: 1..157
score: 8.7E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG05G000680Csa3G119410Cucumber (Chinese Long) v2cuwcgB222
ClCG05G000680MELO3C006007Melon (DHL92) v3.5.1mewcgB427
ClCG05G000680Cla021139Watermelon (97103) v1wcgwmB286
ClCG05G000680Cla97C05G080780Watermelon (97103) v2wcgwmbB229
ClCG05G000680Bhi01G000372Wax gourdwcgwgoB439
ClCG05G000680CSPI03G07770Wild cucumber (PI 183967)cpiwcgB226
ClCG05G000680Cucsa.259390Cucumber (Gy14) v1cgywcgB451
ClCG05G000680CmaCh00G005600Cucurbita maxima (Rimu)cmawcgB006
ClCG05G000680CmaCh06G009760Cucurbita maxima (Rimu)cmawcgB742
ClCG05G000680CmaCh14G021200Cucurbita maxima (Rimu)cmawcgB233
ClCG05G000680CmoCh06G010280Cucurbita moschata (Rifu)cmowcgB743
ClCG05G000680CmoCh14G021820Cucurbita moschata (Rifu)cmowcgB219
ClCG05G000680Lsi05G021400Bottle gourd (USVL1VR-Ls)lsiwcgB335
ClCG05G000680Cp4.1LG03g15830Cucurbita pepo (Zucchini)cpewcgB559
ClCG05G000680Cp4.1LG08g00740Cucurbita pepo (Zucchini)cpewcgB787
ClCG05G000680CsGy3G007900Cucumber (Gy14) v2cgybwcgB203
ClCG05G000680MELO3C006007.2Melon (DHL92) v3.6.1medwcgB416
ClCG05G000680Carg25706Silver-seed gourdcarwcgB0122
ClCG05G000680Carg20906Silver-seed gourdcarwcgB0968
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG05G000680Wax gourdwcgwgoB420
ClCG05G000680Watermelon (Charleston Gray)wcgwcgB094
ClCG05G000680Cucumber (Gy14) v1cgywcgB377
ClCG05G000680Cucurbita maxima (Rimu)cmawcgB295
ClCG05G000680Cucurbita maxima (Rimu)cmawcgB563
ClCG05G000680Cucurbita maxima (Rimu)cmawcgB738
ClCG05G000680Cucurbita moschata (Rifu)cmowcgB560
ClCG05G000680Wild cucumber (PI 183967)cpiwcgB410
ClCG05G000680Cucumber (Chinese Long) v2cuwcgB392
ClCG05G000680Melon (DHL92) v3.5.1mewcgB030
ClCG05G000680Watermelon (97103) v1wcgwmB295
ClCG05G000680Cucurbita pepo (Zucchini)cpewcgB677
ClCG05G000680Bottle gourd (USVL1VR-Ls)lsiwcgB018
ClCG05G000680Cucumber (Gy14) v2cgybwcgB357
ClCG05G000680Melon (DHL92) v3.6.1medwcgB028
ClCG05G000680Silver-seed gourdcarwcgB0964
ClCG05G000680Cucumber (Chinese Long) v3cucwcgB225
ClCG05G000680Cucumber (Chinese Long) v3cucwcgB413
ClCG05G000680Watermelon (97103) v2wcgwmbB210