Lsi05G021400 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G021400
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionORM1-like protein 1
Locationchr05 : 28204421 .. 28211682 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTAAAAGAATTTAATTTTGAGAGATTTATTGAAATATACGGATTAAAATTGAAAAAAAGTTTAAAGAATAGGAAAGAAAAATGTAAGGAATAAATCCTCATAATTAGACCTAAAATTTATTTAATGAGTTGGGGCGGTGGATAAGTGTGGTTTATAGTGGTTTGATTATTATCATCAGAGCTTTGTTACCAATTTTAAGCTCTGTTTTTCGATCATTAGCCCAACCCCACGAAGAAACCATACCTAGAAAAGCTATCTGGGTTTCGTTTGTAATATTTGAACTACTGAGCACGCGATCAAACGCTGCAATCTGTTTCCAAAATTTGATCATTTTTCTTCTCAGTCAAATCCCAAAGGGAGGTCGGAATTAGTGTTTCCCAACAAAATCAGAATCTGGGTCGATGGCTAATCTCTATGTGAAGGCTGTACCTCCGGCGGATCTGAATAGGAACACAGAATGGTTTATGTATCCCGGTGTTTGGACAACCTATATTCTCATTCTCTTCTTCGCTTGGCTTCTCGTCCTCTCTGTATTTGGCTGCTCTCCTGGCATGGCTTGGACCGTCGTCAATCTATCTCATTTTGCTGTATGTGCATCCATATTTCTTCGTTTTTTCTGTCTTTTTTGATCTGGGTTTTTATTGCCTTCCTGTGATTTCATCATTGGGTGTGAGATTGTTGTTGACTTGTTCAATTCATTTATTGGGTTATTCTGCGGCTTGGTTTTGGTGTTTCTGTATTGATTTGTGCTGCTTTAGTCCCCTTCAATTTAATTTTTTTTGTGGATGCTGGGAGAGATTTCATTTGGTTGATTTTGTCTAAACAAAACAAAGACCGCCAACTGTTGTGGCTTTGTGATTTCGGTTTCCTATTTACGCTTGCTTTGGTAATTATATGCTTATTGAACTTGCATGTAATTAATTTTGTTACGAAAAGGATTCTTTTCTTATGCTCGATTTCTACTGTTTCAGATGTTCATCTTCGGATTCTTGTGTAGGTATGGTAGATAAATATTGCATTATCTTTTATTTCATAACCTTTTTCCATGATTGTTATATTTCAAGTCTCGAGCTATTGATACTCTTAGGCTGTTGTTTAGTTTAGTGGCACTAAAATTGTTTGCGAAAGGCAAATGGGTGAACTGCTATTAGAGATGTTTGAAAAGACAATATGCTTTTTGGCTTTATGTTTGATGTATTGCCATACATGGTTTTTATGTGTAAATGTGGATCTTTCTGGATTAAGAGGAAGTGAATTTTGTTTATCATTGGCTCGGACATACCTACTTCAATGCCTGGTTCCCTCTTCTTTTAAGATAGCCAGCAATGAGCTTAGAATGATTTAGAACGTTCTTTTGCTTCATTCTTTGAAGTTGATATGCTCGATGTCTTTATAAAAAATGACGGAAAGGAGCGTGTTTTACTTCAGGTCACTTACCACTTCTTCCACTGGAAGAAAGGGACACCATTTGCTGAAGACCAGGGGATCTACAACAGGCTGACGTGGTGGGAGCAGATCGATAATGGAAAGCAGCTTACGCGCAACAGAAAATTCTTGACCGTTGTTCCCGTGGTGTTGTAAGTTGTTTATTATATGATTCAACCTATGTGCTATTTAACTCGGAAATCACATTTCAAACTGCTTTTATTTGAATTGTTTTTGGTTGTTTTATTCTTCTGAACTTCTAAATTTGAGTGGCCTATTGGACTTCTTGCTCATACTTTGCATATCTTTGACGGTCAATGTTTTTCTATGTTCTATTCTACATTGCTGTCTGATTTTGATTTCAGCATTCATCTTCATAGGTCTTCTGATGATTGATTGGAGAATTCTGTTGACTAAATGGCCTTTTCAATCGAACTGAAAATCTCTAGGCTTGTAATTCTAGGGATTATTTTTTAAGCTTACAAATTTTCTTGTTGGCAAACTTTTGAGCTATGGCTTAGGTGGACACTGATCTTAACAGGCTTTGAATGCAAGAATTCTTGATTGATTTTTAGGGTCTCCATCACTTTTTCCAGAATGTGAGATTTGCTGTATAATTTTCTAATAATTGGTCCTCTCCAAACGATTACGACATATCCCACTTCATTAAAAAATTTGGATCCTGCTTCCTCCTATTCTTATCAAGTTATTTTCCATCTAATTTTTTCTCTTACTTTGGGAGGGTAGTGATAACTGATTAGAAGTTGGCTGGTGCTACTACCTTCTGAATGCTTCGGTATTGCATATCTTCATATTTTCATTAGAGAAGATAGTGGGGTAGATTGGTTCTCTTTAGTTGAAAACCAAACTGGGCCAGCAAAGTTGAACCAAACAAAGTGGGTTATGCTCCGTTTTTTATGGCTTGCGGGGTTGTATGCGATTATTTGGGCGTTGTGGGAAGAGAGGAATAGAAAGGTGTTTGGAAAAGGATCCTATGGAGATTTGGTCCTCGTTCGCTTTCATGTCTCTTTATGGGCTTCGATTTCGAAGACCTTTTGTAACTATTCTATAGGCACTATTTCGCAGACCCTTTTCTATAGAGGGTGCTCCCTTTTTTGTGGGCTTGTTTTTTTTGTATGCCCATGTATTCTTTCATTTTTCTCAATGAAGGTCGTTTTCATTAAAGAAAAAAGGGTTATGCCCCATTTTGCTTCTTTGTCTATTTTAATCGTTCGGTGGGATTGAGATTTGAACTTGTAAACTTTTGATTGAGCATATGTGTCTTAACCAGTTAACTATGTTAAAGCTGGCAGTATTTTGACAATTATTGTCATGAGCTTGGCTTTATCAACTTATTGCCCATTAGTTACATTTTCTCCCAGATCCAATTCATAAAAAATCAATTCAGTTCTCCAACACTAAACTAGGGCCTTATAAAAGCTACAAGTTCCTTTAACCTAGTAAATCTTGGAAACTAGACATCTAACTTGTTGGAGTGCAGTAAGTCTTAGTTACAACATAGATTCGAAGTTTACAAGTGTAATCTAAAAGAACTATTGAACATGAATTTATGGAGAAATTGATAGGACCAAGAGTGACAAATGAATCAAATGATTAAGGAAAAAGATGAGGGACGAGAAGGATGGTGCTTGAGTGGTCGTACTACTACGCTTATGAACCACCTCTCCTCTCCTAACTTGAGACGACGTTTAACTTGCTACCTTATTTAAGGCAGTCTGAAAAGCCCAAGAGATTGGAAGGCAGAAGTGCATCGTATCAAAAATTACGTATGGAACGTTGTTTGTTGTTGACTAAAGGAGAGAGGGAAGGTGGTTCGTAAATAGTAAAATGGTGTTAGCTTTGGGCATCATGGGTGGGCTGATCATTCTAAGACATTCTTAAACCTCTAGCTCTTAAGACCTCTTCAATTGAAGATTGTTGTAAATTAGGAGGTGTGCGTGTGTGTGTTTAATTAAAAAAAGAGACAGAAAAACACTTAGCAAAGAAATAAAGTGGCCTAAAGAGAGACAACCTAAAGGGCAAGGGGACAGGAAGTCCCCTCTCTGAGGTGAAAGGTTACAAAAGCACCTTCCAATCTAAGTGAGAACATGGTGTAATACCAATTTCTAGAATTGAATCAAATGAATCTCTACCTCTAAATGAGGGGAGATGACCTTTATTTATAGGGAAAATGTGAGTACAAATGTAAAGAAATCTAACAAATCAAAATAACAAACAAACTATTTAACAACTAACTCACTTAACAACTAACAAACTAAAACTTACAAATGGTAGTTTTGTTACTACACCAGAACCCCTGGGGAAGTGTTGGATACATCTTTATTCAATGCTCTTTTTTGGTGTAAAAATATTCAACTGTTCTCAAGTTACAACTAAACTTTCCTTGTATCTATTTTGAGGAATCTTTTGTAATCCCATAATGGGCTCATTTTGTAACACTTTGAGTATTTCATTCATCAATGAAATTGTAACTTCTTTGATCGAAATTGGTGTCTTCCTATGGTGTTATCCATTGAAGCATAACGCCTAGTAACGAGAAGCAAAGGAACAATGAAGAAAAAGGTGACTCGAACCTTCAAAATGAGCCGAGCACATAATACACCATGAAGGTGAAAGCGATATATAAGTCATACATCTCTGAAGTCTATCTGATGTGTTAATAGCCAAGACTCAGCTCCCACAGAAAAATTTAATAAATAGCATAAATATTTGATATTTTATTTTTAACTTAGTTATTCTAAATTTTCAAAGAATATATCAAATTAGACATTAGTCAAACTTTAGATAATTTAGTTATCTCGTTACAGAAACAATTCTTCGCATGGAGCTATTTTGAAAAGGCACTCCAAAGAAGATTTAATTCTCGCCTTGAACTCTTGCTCTTGGGGGAATTGGTCCTACAGACATTATTTAAAGAAGGAATTGTCACTGCTGTACTTTACTACTTAACGCCTAGCTGTTGTTCTCTGTCTTAGAGATTTGGAATCTCAAGATTACCTTTTCTTGCATTTCCCTTACGATAGTGCATTTTGGACACATTCATTGTTCATTGGTGTGCTCCTCCTCTTTCAACTCTTCTAGGCTTTACTTTCTTCATTAATCAATGAAATATTTCTTTTAATAATTTTTTTGGTTAATTATGATTTATTTCTTCTTTTTTTTTTCCTAATATAAATTATGATTTTTTTTCTATCAACACGATTTGGAAGTTTTTTTTCTTCCTATAACCTAGTTGGTTCCGGGTGGGTTGACATCCAGTTACTTTTCTGTTGCAAGCCTTCTTCCCTTTTGATGAAAGTCGAGTTCATGGTTATCCAGCCTTCAGTCGACGTGTCCCTATTTCTATTATTTCCTTTCCCCCTTGCTATGATACGTTACGATACTCAAATCTTACACAGGCCTTTTAATTTTAATTCATATTGTGCTTGGATTTGGTTATATTAAGTATAGATCCATGTTCTTTCATTCAGCATAGCTCAGGATCTCAACCAAATGATTGAGGTTCCACGCCCATATGTTATTAAATTAAAAAAAAAAAAAACCCTCTTCTAATGTTCGTTGGATTGTTCTACTCTGCTTCCAACCAGTCAAAAAGCATTACAAAATTTCATACTGAATTTATAAAGATGATAAAATTTGAACTTTTCTTCAAGCCCTGTTTCTCGTAATGTATGTATTTGGATCTCTTTTTGATAGGAAATGAATTTCATTACCATGTATGAAACTACAGACAAAAAAACCTCGAAGAGGACAGGGGATTTAAAAAAGGCTGCCAGTTTGCCAAACTATGCTCAATGAGTTATCACGAAAGGATTTGGCCTGACTCCCACTCTATTTGAGTATTTTCCACCAAATACTCTATTTGGTCCCTAGCTAGGTTCTATGTTTCTCTCTGGGCATTAGTGTCAAATACTTTTGTAATTATACTTTAGCCTTTAGGTCTTGTTTTACTTGACTAGATTTCCTTTCTATAGTGGGATTCTCCTGGGTGCTTGGTTTTTGTTTGGATGCCCTTTTATTCTGTCATTACATCTCATTGAAAGTGTGGTTCATCATTAGGGGAAAAAAAAGCAAAAGGAATCCTGGGTGAGTATTAGTAGCAATGATATGAAATTCAATTTTCCAATTGTTTTGGAGCAAGATAAGATTTTATCTGATGATGCTAATGACGGGTCCTTGCTAAAACTCTTGAGAAGATTCTCTCTCTCCTCCAAAGAGTTTGTTGGATGATAAAAAGTCATTTGCTTCCTTTATAAAGGTTTGTGGCCTTGAGGTTTAAGAGATAAAGGCCTAGGACGTCTATGAAGTTTTTGCCCTTGGGATTTCAAAGTTTTTTTGGCAGTCCTTCCGTGTGGATTTTTCTTGCGGCTTGTTTGTGGAAAGAGATCTTTTGGTGGTTTTTCCATGCTTGGCATTTTTTTGGCTCAATGTGTTTTCAGATTCGTGGTAGTTTTTTCTTTTTGAAAAGAAAAGGCAAAAGGATTTGGCCTTGAGAAGAGAAAAACAGCTTCCAACTACTCTTCTGCATTTCTTTTGGAATAGTTGAAGATTCTAATGTTCCTTCTAACCTTGACTCCCACGAAACTGTACAAAAACCATTGAAATTGTGGCCATAGAAACATTAGAACAAAAACAACAGTCTGTACCTTGGAAGAAGTTATGTTTACTGATCCACGCATGGGAACAAGAGAGACCATTGGGGTCGAGTCTGTTCTCTTGATGAGGAGAATAAGTGAGATTATTTGTATAATTTAGTTAATAATAGTTTAGATGTTAATTTAGATTAATTAGTTAATTGGTCTTATTTCCTTATAAGGTTATAGATAGCCACATCAAGGGATGAATTTCTCTTGTTTGACTATGGACTTGGTCTAATACCTTACTATTGTATCACCTTACTTTCGAAGACTATACCAGGGTCTTCCTATTTTCGTCTTGAGTGTTCATACCACCCAAACTCAGTGACCATATAACAAGTTTGCACCTTTTAGATATCAAAATTTTCTAAAGGAGATCTTGCTATATGAGGCTACAAGCCTACAAATACGAAACTCTTGTCAGGAAATAGAAGTGTTTCAATCTGAATGATTGGCCTAAACCTTTGAAATCTTTTTTCCTTCGGCACCTTTACAGTTTTACTATGTTCATGTTTAAAGATGCAAAATCGAGTATGTTTCTTTCTTTGAATGCGTCGGTGAACAAGTGTGTACTTACGTTCCTCAGTGTAATCAGCTTTCAAGCTATTACACATACCAAGAATACTTTGCTAACTATATTGACTTAGTCACAAAATCATCAAAAAGAAAACTTCGCTCAATTTGTTTTTTCTTATTCCACAGGTACTTGATAGCCTCGCACACAACTGACTATCAACATCCAATGTTATTTCTCAACACTCTTGCAGTAATTGTACTAGTTATTGCAAAGTTTCCCCATATGCACAAGGTACGTATCTTTGGAATCAATGCTGACAAGTGAAGCTCACATCATGAGATTTTCGGTTCGACTCGCCAAAAAGCTTCTCGTCCTTCTCTCAATCTGGTAAAATGATATATCTCTGTATAGTAGTTGGGACCGGAAGGATACTGAAAAATTTGTAGTTTTTTTTCCTTTTTCTTTTTTGTACCGACTGCTTGTTCCGCCTGTTGCTTAATGAATAAGTAAATGCAATTATCTTTTATACAGTAGAGAAATGTGATGCATTCGAGTTTCACTGTCCTTATAAAGTATTTTTTGGGACAACACACTTCATAATTCTTACATGTTATTTCTCCATCTTGTGTTGCTATAGTTGATTACTTCTACAGACAAAAAC

mRNA sequence

GGTAAAAGAATTTAATTTTGAGAGATTTATTGAAATATACGGATTAAAATTGAAAAAAAGTTTAAAGAATAGGAAAGAAAAATGTAAGGAATAAATCCTCATAATTAGACCTAAAATTTATTTAATGAGTTGGGGCGGTGGATAAGTGTGGTTTATAGTGGTTTGATTATTATCATCAGAGCTTTGTTACCAATTTTAAGCTCTGTTTTTCGATCATTAGCCCAACCCCACGAAGAAACCATACCTAGAAAAGCTATCTGGGTTTCGTTTGTAATATTTGAACTACTGAGCACGCGATCAAACGCTGCAATCTGTTTCCAAAATTTGATCATTTTTCTTCTCAGTCAAATCCCAAAGGGAGGTCGGAATTAGTGTTTCCCAACAAAATCAGAATCTGGGTCGATGGCTAATCTCTATGTGAAGGCTGTACCTCCGGCGGATCTGAATAGGAACACAGAATGGTTTATGTATCCCGGTGTTTGGACAACCTATATTCTCATTCTCTTCTTCGCTTGGCTTCTCGTCCTCTCTGTATTTGGCTGCTCTCCTGGCATGGCTTGGACCGTCGTCAATCTATCTCATTTTGCTGTCACTTACCACTTCTTCCACTGGAAGAAAGGGACACCATTTGCTGAAGACCAGGGGATCTACAACAGGCTGACGTGGTGGGAGCAGATCGATAATGGAAAGCAGCTTACGCGCAACAGAAAATTCTTGACCGTTGTTCCCGTGGTGTTGTACTTGATAGCCTCGCACACAACTGACTATCAACATCCAATGTTATTTCTCAACACTCTTGCAGTAATTGTACTAGTTATTGCAAAGTTTCCCCATATGCACAAGGTACGTATCTTTGGAATCAATGCTGACAAGTGAAGCTCACATCATGAGATTTTCGGTTCGACTCGCCAAAAAGCTTCTCGTCCTTCTCTCAATCTGGTAAAATGATATATCTCTGTATAGTAGTTGGGACCGGAAGGATACTGAAAAATTTGTAGTTTTTTTTCCTTTTTCTTTTTTGTACCGACTGCTTGTTCCGCCTGTTGCTTAATGAATAAGTAAATGCAATTATCTTTTATACAGTAGAGAAATGTGATGCATTCGAGTTTCACTGTCCTTATAAAGTATTTTTTGGGACAACACACTTCATAATTCTTACATGTTATTTCTCCATCTTGTGTTGCTATAGTTGATTACTTCTACAGACAAAAAC

Coding sequence (CDS)

ATGGCTAATCTCTATGTGAAGGCTGTACCTCCGGCGGATCTGAATAGGAACACAGAATGGTTTATGTATCCCGGTGTTTGGACAACCTATATTCTCATTCTCTTCTTCGCTTGGCTTCTCGTCCTCTCTGTATTTGGCTGCTCTCCTGGCATGGCTTGGACCGTCGTCAATCTATCTCATTTTGCTGTCACTTACCACTTCTTCCACTGGAAGAAAGGGACACCATTTGCTGAAGACCAGGGGATCTACAACAGGCTGACGTGGTGGGAGCAGATCGATAATGGAAAGCAGCTTACGCGCAACAGAAAATTCTTGACCGTTGTTCCCGTGGTGTTGTACTTGATAGCCTCGCACACAACTGACTATCAACATCCAATGTTATTTCTCAACACTCTTGCAGTAATTGTACTAGTTATTGCAAAGTTTCCCCATATGCACAAGGTACGTATCTTTGGAATCAATGCTGACAAGTGA

Protein sequence

MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK
Homology
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BLAST of Lsi05G021400 vs. Swiss-Prot
Match: YBA9_SCHPO (Uncharacterized protein C119.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC119.09c PE=2 SV=3)

HSP 1 Score: 121.7 bits (304), Expect = 7.1e-27
Identity = 56/139 (40.29%), Postives = 88/139 (63.31%), Query Frame = 1 

Query: 15  NRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSHFAVTYHFFHWKKGT 74
           N N+ W  Y G W  +I+++    L+  ++   S  +AWT+ NL++ A ++  FHW  GT
Sbjct: 33  NYNSNWVNYKGAWVIHIVLIAALRLIFHAIPSVSRELAWTLTNLTYMAGSFIMFHWVTGT 92

Query: 75  PFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFLNTLAV 134
           PF  + G Y+RLT WEQ+D G Q T  RK+L V+P++L+L+++H T Y   M  +N  A+
Sbjct: 93  PFEFNGGAYDRLTMWEQLDEGNQYTPARKYLLVLPIILFLMSTHYTHYNGWMFLVNIWAL 152

Query: 135 IVLVIAKFPHMHKVRIFGI 154
            +++I K P +H+ RIFGI
Sbjct: 153 FMVLIPKLPAVHRKRIFGI 171

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BLAST of Lsi05G021400 vs. Swiss-Prot
Match: ORML1_MOUSE (ORM1-like protein 1 OS=Mus musculus GN=Ormdl1 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-25
Identity = 63/147 (42.86%), Postives = 87/147 (59.18%), Query Frame = 1 

Query: 9   VPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSHFAVTYHFF 68
           V  +++N NT      G+W TY L +    +++LS+  CS  +AWT+ N+ H    Y F 
Sbjct: 5   VAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFCSVPVAWTLTNIIHNLGMYVFL 64

Query: 69  HWKKGTPF-AEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQHPML 128
           H  KGTPF   DQG    LT WEQ+D G Q T +RKF T+ P++LY +AS  T Y     
Sbjct: 65  HAVKGTPFETPDQGRARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYDPTHF 124

Query: 129 FLNTLAVIVLVIAKFPHMHKVRIFGIN 155
            LNT +++ ++I K P +H VRIFGIN
Sbjct: 125 ILNTASLLSVLIPKMPQLHGVRIFGIN 151

[Close]
BLAST of Lsi05G021400 vs. Swiss-Prot
Match: ORML3_MOUSE (ORM1-like protein 3 OS=Mus musculus GN=Ormdl3 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-25
Identity = 61/144 (42.36%), Postives = 86/144 (59.72%), Query Frame = 1 

Query: 12  ADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSHFAVTYHFFHWK 71
           +++N NT      G+W +Y+L +    +++LS+   S  + WT+ NL H    Y F H  
Sbjct: 8   SEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNLGMYIFLHTV 67

Query: 72  KGTPF-AEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFLN 131
           KGTPF   DQG    LT WEQ+D G Q T +RKFLT+ P+VLY + S  T Y      LN
Sbjct: 68  KGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYDQVHFILN 127

Query: 132 TLAVIVLVIAKFPHMHKVRIFGIN 155
           T++++ ++I K P +H VRIFGIN
Sbjct: 128 TVSLMTVLIPKLPQLHGVRIFGIN 151

[Close]
BLAST of Lsi05G021400 vs. Swiss-Prot
Match: ORML3_RAT (ORM1-like protein 3 OS=Rattus norvegicus GN=Ormdl3 PE=2 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 2.3e-25
Identity = 61/144 (42.36%), Postives = 86/144 (59.72%), Query Frame = 1 

Query: 12  ADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSHFAVTYHFFHWK 71
           +++N NT      G+W +Y+L +    +++LS+   S  + WT+ NL H    Y F H  
Sbjct: 8   SEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNLGMYIFLHTV 67

Query: 72  KGTPF-AEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFLN 131
           KGTPF   DQG    LT WEQ+D G Q T +RKFLT+ P+VLY + S  T Y      LN
Sbjct: 68  KGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYDQVHFILN 127

Query: 132 TLAVIVLVIAKFPHMHKVRIFGIN 155
           T++++ ++I K P +H VRIFGIN
Sbjct: 128 TVSLMSVLIPKLPQLHGVRIFGIN 151

[Close]
BLAST of Lsi05G021400 vs. Swiss-Prot
Match: ORML3_AILME (ORM1-like protein 3 OS=Ailuropoda melanoleuca GN=ORMDL3 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.0e-25
Identity = 61/144 (42.36%), Postives = 86/144 (59.72%), Query Frame = 1 

Query: 12  ADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSHFAVTYHFFHWK 71
           +++N NT      G+W +Y+L +    +++LS+   S  + WT+ NL H    Y F H  
Sbjct: 8   SEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNTGMYIFLHTV 67

Query: 72  KGTPF-AEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFLN 131
           KGTPF   DQG    LT WEQ+D G Q T +RKFLT+ P+VLY + S  T Y      LN
Sbjct: 68  KGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYDQIHFVLN 127

Query: 132 TLAVIVLVIAKFPHMHKVRIFGIN 155
           T++++ ++I K P +H VRIFGIN
Sbjct: 128 TVSLMSVLIPKLPQLHGVRIFGIN 151

[Close]
BLAST of Lsi05G021400 vs. TrEMBL
Match: A0A0A0L3T2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119410 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 3.9e-88
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPP DLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH
Sbjct: 1   MANLYVKAVPPTDLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK
Sbjct: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 157

[Close]
BLAST of Lsi05G021400 vs. TrEMBL
Match: A0A061DTH4_THECC (ORMDL family protein OS=Theobroma cacao GN=TCM_005108 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 1.4e-85
Identity = 150/157 (95.54%), Postives = 155/157 (98.73%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFF+WLLVLS+FGCSPGMAWT+VNLSH
Sbjct: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFSWLLVLSIFGCSPGMAWTIVNLSH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           F VTYHFFHWKKGTPFAEDQGIYN LTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FLVTYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DYQHPMLFLNTLAV+VLVIAKFP+MHKVRIFGINADK
Sbjct: 121 DYQHPMLFLNTLAVLVLVIAKFPNMHKVRIFGINADK 157

[Close]
BLAST of Lsi05G021400 vs. TrEMBL
Match: A0A0D2QQY6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G153200 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 6.8e-85
Identity = 149/157 (94.90%), Postives = 154/157 (98.09%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFF+WLLVLS+FGCSPGMAWTVVNL+H
Sbjct: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFSWLLVLSIFGCSPGMAWTVVNLAH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           F VTYHFFHWKKGTPFAEDQGIYN LTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FLVTYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DYQHPMLF NTLAV+VLVIAKFP+MHKVRIFGINADK
Sbjct: 121 DYQHPMLFFNTLAVLVLVIAKFPNMHKVRIFGINADK 157

[Close]
BLAST of Lsi05G021400 vs. TrEMBL
Match: A0A0B0MEV4_GOSAR (ORM1-like protein 1 OS=Gossypium arboreum GN=F383_12486 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 1.5e-84
Identity = 148/157 (94.27%), Postives = 154/157 (98.09%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPPADLNRNTEWF+YPGVWTTYILILFF+WLLVLS+FGCSPGMAWTVVNL+H
Sbjct: 1   MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFSWLLVLSIFGCSPGMAWTVVNLAH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           F VTYHFFHWKKGTPFAEDQGIYN LTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FLVTYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DYQHPMLF NTLAV+VLVIAKFP+MHKVRIFGINADK
Sbjct: 121 DYQHPMLFFNTLAVLVLVIAKFPNMHKVRIFGINADK 157

[Close]
BLAST of Lsi05G021400 vs. TrEMBL
Match: A0A0D2SZN0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G126900 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.0e-84
Identity = 146/157 (92.99%), Postives = 154/157 (98.09%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPPADLNRNTEWFMYPGVWTTYIL LFF+WLLVLS+FGCSPGMAWT+VNL+H
Sbjct: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILFLFFSWLLVLSIFGCSPGMAWTIVNLAH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           F VTYHFFHWKKGTPFA+DQGIYN LTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FLVTYHFFHWKKGTPFADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DYQHPMLFLNTLAVI+LV+AKFP+MHKVRIFGINADK
Sbjct: 121 DYQHPMLFLNTLAVIILVVAKFPNMHKVRIFGINADK 157

[Close]
BLAST of Lsi05G021400 vs. TAIR10
Match: AT1G01230.1 (AT1G01230.1 ORMDL family protein)

HSP 1 Score: 298.5 bits (763), Expect = 2.4e-81
Identity = 136/157 (86.62%), Postives = 148/157 (94.27%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPP D+NRNTEWFMYPGVWTTY+LILFF WL+VLSV GCSPGMAWTVVNL+H
Sbjct: 1   MANLYVKAVPPPDMNRNTEWFMYPGVWTTYMLILFFGWLVVLSVSGCSPGMAWTVVNLAH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           F VTYH FHW KGTPFA+DQGIYN LTWWEQ+DNG+QLTRNRKFLT+VPVVLYLIASHTT
Sbjct: 61  FVVTYHSFHWMKGTPFADDQGIYNGLTWWEQMDNGQQLTRNRKFLTLVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DY+HP LFLNTLAV+VLV+AKFP+MHKVRIFGIN DK
Sbjct: 121 DYRHPWLFLNTLAVMVLVVAKFPNMHKVRIFGINGDK 157

[Close]
BLAST of Lsi05G021400 vs. TAIR10
Match: AT5G42000.1 (AT5G42000.1 ORMDL family protein)

HSP 1 Score: 293.5 bits (750), Expect = 7.7e-80
Identity = 131/154 (85.06%), Postives = 145/154 (94.16%), Query Frame = 1 

Query: 4   LYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSHFAV 63
           +YV+A+P  D+NRNTEWF YPGVWTTYILILFF+WLLVLSVF CSPG+AWT+V+L+HF V
Sbjct: 1   MYVRALPTTDVNRNTEWFTYPGVWTTYILILFFSWLLVLSVFHCSPGIAWTIVHLAHFTV 60

Query: 64  TYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQ 123
           TYH FHWKKGTPF +DQG+YNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQ
Sbjct: 61  TYHSFHWKKGTPFGDDQGVYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQ 120

Query: 124 HPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           HPMLFLNTLAV V+V+AKFPHMHKVRIFGIN D+
Sbjct: 121 HPMLFLNTLAVFVMVVAKFPHMHKVRIFGINGDQ 154

[Close]
BLAST of Lsi05G021400 vs. NCBI nr
Match: gi|659074917|ref|XP_008437865.1| (PREDICTED: ORM1-like protein 3 [Cucumis melo])

HSP 1 Score: 333.6 bits (854), Expect = 1.9e-88
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH
Sbjct: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK
Sbjct: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 157

[Close]
BLAST of Lsi05G021400 vs. NCBI nr
Match: gi|449432032|ref|XP_004133804.1| (PREDICTED: ORM1-like protein 3 [Cucumis sativus])

HSP 1 Score: 332.0 bits (850), Expect = 5.5e-88
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPP DLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH
Sbjct: 1   MANLYVKAVPPTDLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK
Sbjct: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 157

[Close]
BLAST of Lsi05G021400 vs. NCBI nr
Match: gi|590721036|ref|XP_007051495.1| (ORMDL family protein [Theobroma cacao])

HSP 1 Score: 323.6 bits (828), Expect = 2.0e-85
Identity = 150/157 (95.54%), Postives = 155/157 (98.73%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFF+WLLVLS+FGCSPGMAWT+VNLSH
Sbjct: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFSWLLVLSIFGCSPGMAWTIVNLSH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           F VTYHFFHWKKGTPFAEDQGIYN LTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FLVTYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DYQHPMLFLNTLAV+VLVIAKFP+MHKVRIFGINADK
Sbjct: 121 DYQHPMLFLNTLAVLVLVIAKFPNMHKVRIFGINADK 157

[Close]
BLAST of Lsi05G021400 vs. NCBI nr
Match: gi|823124597|ref|XP_012480902.1| (PREDICTED: ORM1-like protein 2 [Gossypium raimondii])

HSP 1 Score: 321.2 bits (822), Expect = 9.8e-85
Identity = 149/157 (94.90%), Postives = 154/157 (98.09%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFF+WLLVLS+FGCSPGMAWTVVNL+H
Sbjct: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFSWLLVLSIFGCSPGMAWTVVNLAH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           F VTYHFFHWKKGTPFAEDQGIYN LTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FLVTYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DYQHPMLF NTLAV+VLVIAKFP+MHKVRIFGINADK
Sbjct: 121 DYQHPMLFFNTLAVLVLVIAKFPNMHKVRIFGINADK 157

[Close]
BLAST of Lsi05G021400 vs. NCBI nr
Match: gi|728807250|gb|KHF97455.1| (ORM1-like protein 1 [Gossypium arboreum])

HSP 1 Score: 320.1 bits (819), Expect = 2.2e-84
Identity = 148/157 (94.27%), Postives = 154/157 (98.09%), Query Frame = 1 

Query: 1   MANLYVKAVPPADLNRNTEWFMYPGVWTTYILILFFAWLLVLSVFGCSPGMAWTVVNLSH 60
           MANLYVKAVPPADLNRNTEWF+YPGVWTTYILILFF+WLLVLS+FGCSPGMAWTVVNL+H
Sbjct: 1   MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFSWLLVLSIFGCSPGMAWTVVNLAH 60

Query: 61  FAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120
           F VTYHFFHWKKGTPFAEDQGIYN LTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FLVTYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 121 DYQHPMLFLNTLAVIVLVIAKFPHMHKVRIFGINADK 158
           DYQHPMLF NTLAV+VLVIAKFP+MHKVRIFGINADK
Sbjct: 121 DYQHPMLFFNTLAVLVLVIAKFPNMHKVRIFGINADK 157

The following BLAST results are available for this feature:
BLAST of Lsi05G021400 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YBA9_SCHPO7.1e-2740.29Uncharacterized protein C119.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC... [more]
ORML1_MOUSE1.0e-2542.86ORM1-like protein 1 OS=Mus musculus GN=Ormdl1 PE=2 SV=1[more]
ORML3_MOUSE1.3e-2542.36ORM1-like protein 3 OS=Mus musculus GN=Ormdl3 PE=2 SV=1[more]
ORML3_RAT2.3e-2542.36ORM1-like protein 3 OS=Rattus norvegicus GN=Ormdl3 PE=2 SV=2[more]
ORML3_AILME3.0e-2542.36ORM1-like protein 3 OS=Ailuropoda melanoleuca GN=ORMDL3 PE=3 SV=1[more]
BLAST of Lsi05G021400 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3T2_CUCSA3.9e-8899.36Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119410 PE=4 SV=1[more]
A0A061DTH4_THECC1.4e-8595.54ORMDL family protein OS=Theobroma cacao GN=TCM_005108 PE=4 SV=1[more]
A0A0D2QQY6_GOSRA6.8e-8594.90Uncharacterized protein OS=Gossypium raimondii GN=B456_001G153200 PE=4 SV=1[more]
A0A0B0MEV4_GOSAR1.5e-8494.27ORM1-like protein 1 OS=Gossypium arboreum GN=F383_12486 PE=4 SV=1[more]
A0A0D2SZN0_GOSRA2.0e-8492.99Uncharacterized protein OS=Gossypium raimondii GN=B456_008G126900 PE=4 SV=1[more]
BLAST of Lsi05G021400 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G01230.12.4e-8186.62 ORMDL family protein[more]
AT5G42000.17.7e-8085.06 ORMDL family protein[more]
BLAST of Lsi05G021400 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074917|ref|XP_008437865.1|1.9e-88100.00PREDICTED: ORM1-like protein 3 [Cucumis melo][more]
gi|449432032|ref|XP_004133804.1|5.5e-8899.36PREDICTED: ORM1-like protein 3 [Cucumis sativus][more]
gi|590721036|ref|XP_007051495.1|2.0e-8595.54ORMDL family protein [Theobroma cacao][more]
gi|823124597|ref|XP_012480902.1|9.8e-8594.90PREDICTED: ORM1-like protein 2 [Gossypium raimondii][more]
gi|728807250|gb|KHF97455.1|2.2e-8494.27ORM1-like protein 1 [Gossypium arboreum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0005789endoplasmic reticulum membrane
Vocabulary: INTERPRO
TermDefinition
IPR007203ORMDL
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0010286 heat acclimation
biological_process GO:0006661 phosphatidylinositol biosynthetic process
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G021400.1Lsi05G021400.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007203ORMDL familyPIRPIRSF018147ORM1coord: 3..157
score: 3.9
IPR007203ORMDL familyPANTHERPTHR12665ORMDL PROTEINScoord: 1..157
score: 8.7E
IPR007203ORMDL familyPFAMPF04061ORMDLcoord: 15..149
score: 5.7
NoneNo IPR availablePANTHERPTHR12665:SF14SUBFAMILY NOT NAMEDcoord: 1..157
score: 8.7E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi05G021400Csa3G119410Cucumber (Chinese Long) v2culsiB209
Lsi05G021400CSPI03G07770Wild cucumber (PI 183967)cpilsiB207
Lsi05G021400Cucsa.259390Cucumber (Gy14) v1cgylsiB415
Lsi05G021400CmaCh14G021200Cucurbita maxima (Rimu)cmalsiB245
Lsi05G021400CmaCh06G009760Cucurbita maxima (Rimu)cmalsiB760
Lsi05G021400CmoCh06G010280Cucurbita moschata (Rifu)cmolsiB758
Lsi05G021400CmoCh14G021820Cucurbita moschata (Rifu)cmolsiB233
Lsi05G021400Cla021139Watermelon (97103) v1lsiwmB365
Lsi05G021400MELO3C006007Melon (DHL92) v3.5.1lsimeB378
Lsi05G021400ClCG05G000680Watermelon (Charleston Gray)lsiwcgB335
Lsi05G021400MELO3C006007.2Melon (DHL92) v3.6.1lsimedB396
Lsi05G021400Cla97C05G080780Watermelon (97103) v2lsiwmbB333
Lsi05G021400Bhi01G000372Wax gourdlsiwgoB433
Lsi05G021400Cp4.1LG08g00740Cucurbita pepo (Zucchini)cpelsiB714
Lsi05G021400Cp4.1LG03g15830Cucurbita pepo (Zucchini)cpelsiB506
Lsi05G021400CsGy3G007900Cucumber (Gy14) v2cgyblsiB196
Lsi05G021400Carg25706Silver-seed gourdcarlsiB110
Lsi05G021400Carg20906Silver-seed gourdcarlsiB907
Lsi05G021400CsaV3_3G007890Cucumber (Chinese Long) v3cuclsiB228
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G021400Cucumber (Chinese Long) v3cuclsiB402
Lsi05G021400Watermelon (97103) v2lsiwmbB319
Lsi05G021400Wax gourdlsiwgoB419
Lsi05G021400Bottle gourd (USVL1VR-Ls)lsilsiB014
Lsi05G021400Cucumber (Gy14) v1cgylsiB349
Lsi05G021400Cucurbita maxima (Rimu)cmalsiB770
Lsi05G021400Cucurbita moschata (Rifu)cmolsiB557
Lsi05G021400Cucurbita pepo (Zucchini)cpelsiB626
Lsi05G021400Wild cucumber (PI 183967)cpilsiB382
Lsi05G021400Cucumber (Chinese Long) v2culsiB378
Lsi05G021400Melon (DHL92) v3.5.1lsimeB336
Lsi05G021400Watermelon (Charleston Gray)lsiwcgB325
Lsi05G021400Watermelon (97103) v1lsiwmB375
Lsi05G021400Cucumber (Gy14) v2cgyblsiB345
Lsi05G021400Melon (DHL92) v3.6.1lsimedB353