CmaCh00G005600 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAATCTCTATGTCAAGGCTATGCCTCCGGCGGATCTGAATAGGAACACGGAATGGTTTCTTTATCCTGGTGTTTGGACGACATATATTCTCATTTTGTTCTTCACTTGGCTTCTCGTTCTCTCTGTATTTGGCTGCTCTCCTGGAATGGCCTGGACCATCGTCAATCTATCTCATTTTGCTGTATGTGCATCGATTTTCTTTTTGATCTGGGTGTTGTTTCCTTCCCTTGATATCATCATTGGACGTTGGATTGTTGTTGACTTGTGGAATTCATTTTCGATTCTAGTGTGTGTTTTGTTTATGCTGCTTTAAGCCTCTTCAATTTGATCTTTCTGCGATTTCGTTTTCGTTGATTTTGTGAAAATGAATGAAGGATGGATAGCCCAACTGTTCTGGCTTTGTGTATTTCGTTTTCGTTGATTTTGTGAAAATGAATGAAGGATGGATAGCCCAACTGTTCTGGCTTTGTGTATTTGATTTTGGATTCATGCTTGGTTTGGTAATTATATGCTTATTGTACTTGCATGTAAGTAATTTTGATACGAAAGAGATTCTTTCTGTTCGAATTTTACTGTTTCATATGTTCATCTTTGGATTCTTGGTGCGGAGGGGTATTGTAGTAGATAAACATTCTAGTATCTTTGATTTCATAACCCTTTTCCGTGTTGTTTTATTTCAAGCCTCGAACCATTCATAGTCTTAGGCTGTTGTTTAATTTAATGGCACTAAAAGTTGTTTTATTTCAAGCCTCGAACCATTCATAGTCTTAGGCTGTTGTTTAATTTAATGGCACTAAAATTGTTTCTGGAAGACAAATGGGTGAAATATGATTAGAAATGGTTGAAAAGACCATAATTTTTTCAGCCTATGTTTGATGTATTGCCATACATGTTTTTATGTGTAAATGTGAATCTTTCTGGGTTAAGAGTCAGTGAACCGCGTTTGTAATTTTCTCGATGTGTGGTCCTAGCGATCAGCTTAGAATGATTTAGAACGTTCTTATGCTCCGTTATTTGAAGTTGATACGCGCTATGTCTTTGTATAAAATGATAGAAATGTGTGTGTCTTTTACTTCAGGTCACTTACCACTGCTTCCATTGGAAGAAAGGGACACCATTTGCTGAAGACCAAGGGATCTACAACAGATTGACATGGTGGGAGCAGATTGACAATGGAAAGCAGCTTACCCGCAACCGAAAATTCTTGACTGTTGTTCCTGTGGTGCTGTAA ATGGCTAATCTCTATGTCAAGGCTATGCCTCCGGCGGATCTGAATAGGAACACGGAATGGTTTCTTTATCCTGGTGTTTGGACGACATATATTCTCATTTTGTTCTTCACTTGGCTTCTCGTTCTCTCTGTATTTGGCTGCTCTCCTGGAATGGCCTGGACCATCGTCAATCTATCTCATTTTGCTGTCACTTACCACTGCTTCCATTGGAAGAAAGGGACACCATTTGCTGAAGACCAAGGGATCTACAACAGATTGACATGGTGGGAGCAGATTGACAATGGAAAGCAGCTTACCCGCAACCGAAAATTCTTGACTGTTGTTCCTGTGGTGCTGTAA ATGGCTAATCTCTATGTCAAGGCTATGCCTCCGGCGGATCTGAATAGGAACACGGAATGGTTTCTTTATCCTGGTGTTTGGACGACATATATTCTCATTTTGTTCTTCACTTGGCTTCTCGTTCTCTCTGTATTTGGCTGCTCTCCTGGAATGGCCTGGACCATCGTCAATCTATCTCATTTTGCTGTCACTTACCACTGCTTCCATTGGAAGAAAGGGACACCATTTGCTGAAGACCAAGGGATCTACAACAGATTGACATGGTGGGAGCAGATTGACAATGGAAAGCAGCTTACCCGCAACCGAAAATTCTTGACTGTTGTTCCTGTGGTGCTGTAA MANLYVKAMPPADLNRNTEWFLYPGVWTTYILILFFTWLLVLSVFGCSPGMAWTIVNLSHFAVTYHCFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVL
BLAST of CmaCh00G005600 vs. Swiss-Prot
Match: YBA9_SCHPO (Uncharacterized protein C119.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC119.09c PE=2 SV=3) HSP 1 Score: 90.1 bits (222), Expect = 1.6e-17 Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 1
BLAST of CmaCh00G005600 vs. Swiss-Prot
Match: ORML3_AILME (ORM1-like protein 3 OS=Ailuropoda melanoleuca GN=ORMDL3 PE=3 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 3.8e-14 Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = 1
BLAST of CmaCh00G005600 vs. Swiss-Prot
Match: ORML3_HUMAN (ORM1-like protein 3 OS=Homo sapiens GN=ORMDL3 PE=1 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 3.8e-14 Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = 1
BLAST of CmaCh00G005600 vs. Swiss-Prot
Match: ORML3_RAT (ORM1-like protein 3 OS=Rattus norvegicus GN=Ormdl3 PE=2 SV=2) HSP 1 Score: 78.6 bits (192), Expect = 4.9e-14 Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = 1
BLAST of CmaCh00G005600 vs. Swiss-Prot
Match: ORML3_PONAB (ORM1-like protein 3 OS=Pongo abelii GN=ORMDL3 PE=2 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 4.9e-14 Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = 1
BLAST of CmaCh00G005600 vs. TrEMBL
Match: A0A0A0L3T2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119410 PE=4 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 3.5e-59 Identity = 106/112 (94.64%), Postives = 109/112 (97.32%), Query Frame = 1
BLAST of CmaCh00G005600 vs. TrEMBL
Match: A0A061DTH4_THECC (ORMDL family protein OS=Theobroma cacao GN=TCM_005108 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 2.3e-58 Identity = 105/112 (93.75%), Postives = 109/112 (97.32%), Query Frame = 1
BLAST of CmaCh00G005600 vs. TrEMBL
Match: A0A0B0MEV4_GOSAR (ORM1-like protein 1 OS=Gossypium arboreum GN=F383_12486 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 3.9e-58 Identity = 104/112 (92.86%), Postives = 109/112 (97.32%), Query Frame = 1
BLAST of CmaCh00G005600 vs. TrEMBL
Match: A0A0S3SZF2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G175400 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 5.1e-58 Identity = 103/112 (91.96%), Postives = 110/112 (98.21%), Query Frame = 1
BLAST of CmaCh00G005600 vs. TrEMBL
Match: A0A151SIV3_CAJCA (ORM1-like protein 1 OS=Cajanus cajan GN=KK1_000856 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 5.1e-58 Identity = 103/112 (91.96%), Postives = 110/112 (98.21%), Query Frame = 1
BLAST of CmaCh00G005600 vs. TAIR10
Match: AT1G01230.1 (AT1G01230.1 ORMDL family protein) HSP 1 Score: 215.7 bits (548), Expect = 1.5e-56 Identity = 94/112 (83.93%), Postives = 105/112 (93.75%), Query Frame = 1
BLAST of CmaCh00G005600 vs. TAIR10
Match: AT5G42000.1 (AT5G42000.1 ORMDL family protein) HSP 1 Score: 211.1 bits (536), Expect = 3.6e-55 Identity = 92/109 (84.40%), Postives = 102/109 (93.58%), Query Frame = 1
BLAST of CmaCh00G005600 vs. NCBI nr
Match: gi|659074917|ref|XP_008437865.1| (PREDICTED: ORM1-like protein 3 [Cucumis melo]) HSP 1 Score: 236.9 bits (603), Expect = 1.7e-59 Identity = 107/112 (95.54%), Postives = 110/112 (98.21%), Query Frame = 1
BLAST of CmaCh00G005600 vs. NCBI nr
Match: gi|449432032|ref|XP_004133804.1| (PREDICTED: ORM1-like protein 3 [Cucumis sativus]) HSP 1 Score: 235.3 bits (599), Expect = 5.0e-59 Identity = 106/112 (94.64%), Postives = 109/112 (97.32%), Query Frame = 1
BLAST of CmaCh00G005600 vs. NCBI nr
Match: gi|590721036|ref|XP_007051495.1| (ORMDL family protein [Theobroma cacao]) HSP 1 Score: 232.6 bits (592), Expect = 3.3e-58 Identity = 105/112 (93.75%), Postives = 109/112 (97.32%), Query Frame = 1
BLAST of CmaCh00G005600 vs. NCBI nr
Match: gi|728807250|gb|KHF97455.1| (ORM1-like protein 1 [Gossypium arboreum]) HSP 1 Score: 231.9 bits (590), Expect = 5.6e-58 Identity = 104/112 (92.86%), Postives = 109/112 (97.32%), Query Frame = 1
BLAST of CmaCh00G005600 vs. NCBI nr
Match: gi|951067053|ref|XP_014524117.1| (PREDICTED: ORM1-like protein 3 [Vigna radiata var. radiata]) HSP 1 Score: 231.5 bits (589), Expect = 7.3e-58 Identity = 103/112 (91.96%), Postives = 110/112 (98.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |