CmoCh04G027900 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G027900
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionZinc finger CONSTANS-LIKE 7-like protein
LocationCmo_Chr04 : 20083651 .. 20085563 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCGCTTTTTCCCCAAAGTGGGTCCGTCTCTTATTGCCTCCATGGCTTCGCTTTTTCTTCCCCCTTTTTTAAACCTATTTTGATTACCCAAAAGAGCTAAATTTGTTTGTCCATCAGTTTTTTGGACTCAGGAGGCTCAGAAATGTGCATCACCAACACAATCAACAACGAAAACACCCACGATTCTGTAATCCAACGCCCAATTCGTAAATCCAGAACCAAGACAAGACGACCCAAATTTCTCAGCCTTCGATCGGAGCTTATTTCGCCCAGAATTTCCCAAATTTCCCCGATGACACACGACCCATCAGCGCCGCCGCCGCAGAAACAGCTTACTCTGTTTCCCCTGCATCCGGAGAATTTGGTGGAGGACAGAGAGGAGAACGTGGCGTTGATGTTCGAGAACGACGTCGTGAGCAGCTGCTGCAGCTTAGGGAGTTTCCTTCCGACTTACCACAACGACATGTCGTCAGAGGAAGAGTCGCGTAATTTAGCAGAGGAGGCGGCGCTTGTACGGACGGCGATGAGGAGTCGGGAGAGGGAAGCAGGGGCAGAGGAGAAGTGGGTTTGTTATTCGGAGGTAGTGGAGAAGAAGGAGGAGCCGTCATGGACGGCAGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGTAGAGGAAGTGACGAGCACGGCGACAAAGAAGAAGAAGAAGAAGAAGAAGGTGGAGATGAGGGGGAAACAGCTGAGGTTGAAGCTTGATTACGAGGGGATTTTGAACGCTTGGTCGGATAAAGCTCCGCTTTTTATCAATGGAGAATCGCCGCAGACTGTGCCGAATCTTCACGATGATGGGAGTGCTTGGGAGGAGAATCGGAGATCAAAAATGGGGAGCGAAGGAGGAGGGAATGTGTGGAAAGTGCCGGAGATTGGATGGAAGGTGGGTGGCAGAGAGGCAAGTGTCTTGAGATACAAAGAGAAAAGGCAGAGCAGGCTGTTCTCCAAGCGCATTCGGTATCAAGTTAGAAAACTCAATGCTGAAAAACGTCCAAGAATGAAGGTACTTTCAACTCATATCATATACACATTATTGCATCATTTCCATCTATCTAATTCAAACCAAATATTACATTGAATTCATTAAGGTGTATACCTTTAATAAAATGATTAGGTGTTTGAATTTATCAATCTTATATCCGTTTATATCAATGTCAGTTATATCGATTCACAACAAATAGTTTAGTAGCTAGAATCGGGTGGTTTGTGGATTAATTTTGAAATTTTTTATAGGTTAAAATGGGTGCAATTCATTAGTTGGTTTTCTAGCATTTTCCAATTTGATTATTAAGAATGTATATGAATGAACCAAGATCACATTAGAACGAGAGTGATCTTGAACATAGAATGACTAAAAAAAACTTACAAAATTGATGATCAAGTTGCACGTTCCTTTTTAATGCCTTAAAACGATGTTGGAATGACTCGTATTGATCTGTGGAGGATAATTTTCTCTCTTAAAAGTGAAAAGTATATAAAGCAACTGAGATGTCACTAAGTATTAGATTTTGAATTCTGATCCAAATTTGAATGGTTACCAAAAAGATATTAATTAAATTTTTTTATTTACTGATTTGTTATTATTTCTTTTTTTTATATATATTTGATTAAAAACTGATTCCTTTTATCGAAGTATGAATGGACGTTCCTCTCCCTCTCTCTTGCAGGGTCGCTTTGTGAAAAGAAACTGAGAAGGTTTAGAGACATTATTTGGAGATAAGGGCATTCAGGGAAATGTCTTCTCTTTTCTTTATTTTCCACAATTTCAATGTCTTTTTTCCCCCTCTTAAAGATCATGTTGCTTTAAGAAAATATAATTAATGTTAAATAAAAATGTTTATCAAGAAAAAGTATCAACTAGAAATGAATATCCGTACAC

mRNA sequence

TTTCGCTTTTTCCCCAAAGTGGGTCCGTCTCTTATTGCCTCCATGGCTTCGCTTTTTCTTCCCCCTTTTTTAAACCTATTTTGATTACCCAAAAGAGCTAAATTTGTTTGTCCATCAGTTTTTTGGACTCAGGAGGCTCAGAAATGTGCATCACCAACACAATCAACAACGAAAACACCCACGATTCTGTAATCCAACGCCCAATTCGTAAATCCAGAACCAAGACAAGACGACCCAAATTTCTCAGCCTTCGATCGGAGCTTATTTCGCCCAGAATTTCCCAAATTTCCCCGATGACACACGACCCATCAGCGCCGCCGCCGCAGAAACAGCTTACTCTGTTTCCCCTGCATCCGGAGAATTTGGTGGAGGACAGAGAGGAGAACGTGGCGTTGATGTTCGAGAACGACGTCGTGAGCAGCTGCTGCAGCTTAGGGAGTTTCCTTCCGACTTACCACAACGACATGTCGTCAGAGGAAGAGTCGCGTAATTTAGCAGAGGAGGCGGCGCTTGTACGGACGGCGATGAGGAGTCGGGAGAGGGAAGCAGGGGCAGAGGAGAAGTGGGTTTGTTATTCGGAGGTAGTGGAGAAGAAGGAGGAGCCGTCATGGACGGCAGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGTAGAGGAAGTGACGAGCACGGCGACAAAGAAGAAGAAGAAGAAGAAGAAGGTGGAGATGAGGGGGAAACAGCTGAGGTTGAAGCTTGATTACGAGGGGATTTTGAACGCTTGGTCGGATAAAGCTCCGCTTTTTATCAATGGAGAATCGCCGCAGACTGTGCCGAATCTTCACGATGATGGGAGTGCTTGGGAGGAGAATCGGAGATCAAAAATGGGGAGCGAAGGAGGAGGGAATGTGTGGAAAGTGCCGGAGATTGGATGGAAGGTGGGTGGCAGAGAGGCAAGTGTCTTGAGATACAAAGAGAAAAGGCAGAGCAGGCTGTTCTCCAAGCGCATTCGGTATCAAGTTAGAAAACTCAATGCTGAAAAACGTCCAAGAATGAAGGGTCGCTTTGTGAAAAGAAACTGAGAAGGTTTAGAGACATTATTTGGAGATAAGGGCATTCAGGGAAATGTCTTCTCTTTTCTTTATTTTCCACAATTTCAATGTCTTTTTTCCCCCTCTTAAAGATCATGTTGCTTTAAGAAAATATAATTAATGTTAAATAAAAATGTTTATCAAGAAAAAGTATCAACTAGAAATGAATATCCGTACAC

Coding sequence (CDS)

ATGTGCATCACCAACACAATCAACAACGAAAACACCCACGATTCTGTAATCCAACGCCCAATTCGTAAATCCAGAACCAAGACAAGACGACCCAAATTTCTCAGCCTTCGATCGGAGCTTATTTCGCCCAGAATTTCCCAAATTTCCCCGATGACACACGACCCATCAGCGCCGCCGCCGCAGAAACAGCTTACTCTGTTTCCCCTGCATCCGGAGAATTTGGTGGAGGACAGAGAGGAGAACGTGGCGTTGATGTTCGAGAACGACGTCGTGAGCAGCTGCTGCAGCTTAGGGAGTTTCCTTCCGACTTACCACAACGACATGTCGTCAGAGGAAGAGTCGCGTAATTTAGCAGAGGAGGCGGCGCTTGTACGGACGGCGATGAGGAGTCGGGAGAGGGAAGCAGGGGCAGAGGAGAAGTGGGTTTGTTATTCGGAGGTAGTGGAGAAGAAGGAGGAGCCGTCATGGACGGCAGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGTAGAGGAAGTGACGAGCACGGCGACAAAGAAGAAGAAGAAGAAGAAGAAGGTGGAGATGAGGGGGAAACAGCTGAGGTTGAAGCTTGATTACGAGGGGATTTTGAACGCTTGGTCGGATAAAGCTCCGCTTTTTATCAATGGAGAATCGCCGCAGACTGTGCCGAATCTTCACGATGATGGGAGTGCTTGGGAGGAGAATCGGAGATCAAAAATGGGGAGCGAAGGAGGAGGGAATGTGTGGAAAGTGCCGGAGATTGGATGGAAGGTGGGTGGCAGAGAGGCAAGTGTCTTGAGATACAAAGAGAAAAGGCAGAGCAGGCTGTTCTCCAAGCGCATTCGGTATCAAGTTAGAAAACTCAATGCTGAAAAACGTCCAAGAATGAAGGGTCGCTTTGTGAAAAGAAACTGA
Homology
[Close]
BLAST of CmoCh04G027900 vs. Swiss-Prot
Match: COL16_ARATH (Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana GN=COL16 PE=2 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 3.2e-15
Identity = 64/156 (41.03%), Postives = 90/156 (57.69%), Query Frame = 1 

Query: 153 EPSWTAAAAAAEEEEEEVEEVTSTATKKKKKKKKVEMRGKQLRLKLDYEGILNAWSDKAP 212
           E S+   ++    EEE ++ V S+     K K+  E     L L+L+Y+ +++ W  + P
Sbjct: 254 ELSFDYESSHKTSEEEVMKNVESSGECVVKVKE--EEHKNVLMLRLNYDSVISTWGGQGP 313

Query: 213 LFINGESPQTVPNLHDDGSAWEENRRSKMGSEGGGNVWKV----PEIGWKVGGREASVLR 272
            + +GE P+   ++    S W      + G E       V    P  G+  GGREA V R
Sbjct: 314 PWSSGEPPERDMDI----SGWPAFSMVENGGESTHQKQYVGGCLPSSGFGDGGREARVSR 373

Query: 273 YKEKRQSRLFSKRIRYQVRKLNAEKRPRMKGRFVKR 305
           Y+EKR++RLFSK+IRY+VRKLNAEKRPRMKGRFVKR
Sbjct: 374 YREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 403

[Close]
BLAST of CmoCh04G027900 vs. Swiss-Prot
Match: CIA2_ARATH (Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana GN=CIA2 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.0e-13
Identity = 75/202 (37.13%), Postives = 101/202 (50.00%), Query Frame = 1 

Query: 128 MRSREREAGAEEKW----VCYSEVVEKKEEPSWTAAAAAAEEEEEEVEEVTSTATKKKKK 187
           +RS  RE    + W    V + ++  + +      A +  +EE+ + ++V  +  K  KK
Sbjct: 244 LRSALRENDDTKLWKIHTVDFEQISPRIQTVKTETAISTVDEEKSDGKKVVISGEKSNKK 303

Query: 188 KKKVEM--------RGKQLR-------------LKLDYEGILNAWSDKAPLFINGESPQT 247
           KKK +M          K L              LKLDY+G+L AWSDK   F        
Sbjct: 304 KKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKLDYDGVLEAWSDKTSPF-------- 363

Query: 248 VPNLHDDGSAWEENRRSKMGSEGGGNVWKVPEIGWKVGGREASVLRYKEKRQSRLFSKRI 305
            P+      A + N R       G +           G REASVLRYKEKR++RLFSK+I
Sbjct: 364 -PDEIQGSEAVDVNARLAQIDLFGDS-----------GMREASVLRYKEKRRTRLFSKKI 423

[Close]
BLAST of CmoCh04G027900 vs. Swiss-Prot
Match: COL7_ARATH (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana GN=COL7 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 8.7e-13
Identity = 56/141 (39.72%), Postives = 80/141 (56.74%), Query Frame = 1 

Query: 164 EEEEEEVEEVTSTATKKKKKKKKVEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTV 223
           +EEEEE +     +    ++    + R   L L+LDY  +++AW +    +  G  P+ +
Sbjct: 247 DEEEEEAKCENGGSKDSDREASNDKDRKTSLFLRLDYGAVISAWDNHGSPWKTGIKPECM 306

Query: 224 PNLHDDGSAWEENRRSKMGSEGGGNVWKVPEIGWKVGGREASVLRYKEKRQSRLFSKRIR 283
              +             M S+G     +  + G   G REA VLRYKEKR++RLFSK+IR
Sbjct: 307 LGGNTCLPHVVGGYEKLMSSDGSVTRQQGRDGGGSDGEREARVLRYKEKRRTRLFSKKIR 366

Query: 284 YQVRKLNAEKRPRMKGRFVKR 305
           Y+VRKLNAE+RPR+KGRFVKR
Sbjct: 367 YEVRKLNAEQRPRIKGRFVKR 387

[Close]
BLAST of CmoCh04G027900 vs. Swiss-Prot
Match: COL6_ARATH (Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana GN=COL6 PE=2 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 9.0e-10
Identity = 83/269 (30.86%), Postives = 124/269 (46.10%), Query Frame = 1 

Query: 61  QKQLTLFPLHPENLVEDREENVALMFENDVVSSCCSLGSFLPTYHNDMSSEEESRNLAEE 120
           Q +  + PL  ++  E+ ++N      N +  +   L  F       +   +   +  EE
Sbjct: 145 QNEFPMMPLSFKSSDEEDDDNAESCL-NGLFPTDMELAQFTADVETLLGGGDREFHSIEE 204

Query: 121 AALVRTAMRSREREAGAEEKWVCYSEVVEKKE-----------EPSWTAAAAAAEEEEEE 180
             L       +E     EE+ V   EV ++ E           +  +T      E EE+E
Sbjct: 205 LGLGEMLKIEKEE---VEEEGVVTREVHDQDEGDETSPFEISFDYEYTHKTTFDEGEEDE 264

Query: 181 VEEVTSTATKKKKKKK----KVEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQT--V 240
            E+V     +    +     K E + K L L+LDYE +++ W  +         P T  V
Sbjct: 265 KEDVMKNVMEMGVNEMSGGIKEEKKEKALMLRLDYESVISTWGGQG-------IPWTARV 324

Query: 241 PNLHD-DGSAWEENRRSKMGSEGG------GNVWKVPEIGWKVGGREASVLRYKEKRQSR 300
           P+  D D   +  +   + G+E        G    + + G   GGREA V RY+EKR++R
Sbjct: 325 PSEIDLDMVCFPTHTMGESGAEAHHHNHFRGLGLHLGDAG--DGGREARVSRYREKRRTR 384

Query: 301 LFSKRIRYQVRKLNAEKRPRMKGRFVKRN 306
           LFSK+IRY+VRKLNAEKRPRMKGRFVKR+
Sbjct: 385 LFSKKIRYEVRKLNAEKRPRMKGRFVKRS 400

[Close]
BLAST of CmoCh04G027900 vs. Swiss-Prot
Match: HD1_ORYSJ (Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.1e-06
Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 1 

Query: 262 REASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKGRFVKRN 306
           REA VLRY+EK+++R F K IRY+ RK  AE RPR+KGRF KR+
Sbjct: 326 REARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRS 369

[Close]
BLAST of CmoCh04G027900 vs. TrEMBL
Match: A0A0A0KR00_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517810 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.3e-95
Identity = 220/330 (66.67%), Postives = 240/330 (72.73%), Query Frame = 1 

Query: 13  HDSVIQRPIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDPSAPPP----QKQLTLFP 72
           +DS+I+ PIRKSRTKTRRPKFLSLR +L SP+     PM H P  PPP    QKQLTLFP
Sbjct: 4   NDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKSP---PMIHHPPLPPPPPPPQKQLTLFP 63

Query: 73  LHPENL-VEDREENVALMFEND--VVSSCCSLGSFLPTYHNDMSSEEESRNLAEEAALVR 132
           LHPENL VEDRE++VA +FEND  V SSCCSL SFLP Y N+MSSEEESRNL EEA LVR
Sbjct: 64  LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEESRNLVEEAELVR 123

Query: 133 TAMRSREREAGAEEKWVCYSEVVEKKEEPSWTAAAAAAEEEEEEVEEVTSTATKKKKKKK 192
           TAMR+RERE G EEKWVCYSEVVEKKEE   + AA      +E V++V     KKKKKK 
Sbjct: 124 TAMRNRERETGVEEKWVCYSEVVEKKEEEVTSTAA------DEWVKKVKMMKKKKKKKKI 183

Query: 193 KVEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDD-----GSAWEENRRSK 252
           K+EM GKQL LKLDYEGILNAW DKAPLFINGESPQTVP+LHDD      S    N    
Sbjct: 184 KMEMIGKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDG 243

Query: 253 MGSEG-----------GGNVWKVPEI--------------GWKVGGREASVLRYKEKRQS 306
           +GSEG             NVWKVPEI              GWK+G REASVLRYKEKRQS
Sbjct: 244 IGSEGHNSSNNTNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMGQREASVLRYKEKRQS 303

[Close]
BLAST of CmoCh04G027900 vs. TrEMBL
Match: W9SWY4_9ROSA (Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Morus notabilis GN=L484_017689 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.8e-49
Identity = 162/363 (44.63%), Postives = 198/363 (54.55%), Query Frame = 1 

Query: 1   MCITNTINNENTHDSVIQ----------RPIRKSRTKTRRPKFLSLRSEL---ISPR-IS 60
           MC  NT+ + + H               +P RKSRTKTR+PKFLSL  E+    +P+  S
Sbjct: 1   MCNKNTLRSPDHHHHHHHHRRRRHHNQLKPARKSRTKTRKPKFLSLSKEIKPQTTPKPTS 60

Query: 61  QISPMTHDPSAPPPQKQLTLFPLHPENLV-EDR-EENVALMFEND-------VVSSCCSL 120
           +I+ MT          QL LFPLHPENLV +DR +E+ AL+F +D         S    L
Sbjct: 61  EITEMTRH------HHQLNLFPLHPENLVCDDRADEDAALLFHSDGGGGGGGAASLSTLL 120

Query: 121 GSFLPTYHNDMSSEEESRNLA-----------------EEAALVRTAMRSREREAGAEEK 180
            +   T +N MSSEE+S + A                 E   LV+TAMR+RER+  +EEK
Sbjct: 121 HTTTTTTNNTMSSEEDSLSYAYEEEELLSYKCGGGGRVEAETLVKTAMRNRERDL-SEEK 180

Query: 181 WVCYSEVVEKKEEPSWTAAAAAAEEEEEEVEEVTSTATKKKKKKKKVEMRGKQLRLKLDY 240
           WVCYSEVVEKKE                E EEVTS++       +   M    L LKLDY
Sbjct: 181 WVCYSEVVEKKEVV--------------EAEEVTSSS-------ETTAMNKGNLSLKLDY 240

Query: 241 EGILNAWSDKAPLFING---ESPQTVPNLHDD-----GSAWEENRRSKMGSEGGGNVWKV 299
           +GILNAWSDK  L+I G   +SPQTVP+LHD       S +        G    GN+WKV
Sbjct: 241 QGILNAWSDKGSLYIQGSDRQSPQTVPDLHDHHDHFFASDYNTANGLMEGWRNAGNLWKV 300

[Close]
BLAST of CmoCh04G027900 vs. TrEMBL
Match: F6GX66_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0219g00220 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 5.8e-48
Identity = 158/322 (49.07%), Postives = 182/322 (56.52%), Query Frame = 1 

Query: 19  RPIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDPSAPPPQKQLTLFPLHPENLVEDR 78
           +P RK RTKTR+PKFLSLR EL S   SQ S  T   +      QL LFPLHPENLVED+
Sbjct: 31  KPARKIRTKTRKPKFLSLRLELSSDN-SQESGETMTRNH---HHQLNLFPLHPENLVEDK 90

Query: 79  E---ENVALMFEND----------------VVSSCCSLGSFLPTYHNDMSSEEESRNLAE 138
           +   EN+A  F                    V S  SL   L   +    SEE +     
Sbjct: 91  DMHDENMAYFFAASDGGANLNGLLGGDTGAAVPSGDSLSPSLTYAYGGQDSEEGA----- 150

Query: 139 EAALVRTAMRSREREAGAEEKWVCYSEVVEKKEEPSWTAAAAAAEEEEEEVEEVTSTATK 198
            + LVR A+R+RER+A +EEKWV YSEVVEKKE                  EEVTS A  
Sbjct: 151 -STLVRAALRNRERDA-SEEKWVSYSEVVEKKE------------------EEVTSCAAD 210

Query: 199 KKKKKKKVEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSAWEENRRS 258
              K        ++L LKLDY+ ILNAWS K PLFI GESPQTVP+L  D +       +
Sbjct: 211 LWYKN-----HTQRLSLKLDYQEILNAWSGKGPLFIEGESPQTVPDLAHDAA-------N 270

Query: 259 KMGSEGGGNVWKVPEIGW----------------KVGGREASVLRYKEKRQSRLFSKRIR 306
            MG +G   VWKVPE+G                 K G R+ASVLRYKEKRQSRLFSKRIR
Sbjct: 271 AMG-DGWSGVWKVPEMGGSRSSMKMEEVGGGEGSKKGQRQASVLRYKEKRQSRLFSKRIR 310

[Close]
BLAST of CmoCh04G027900 vs. TrEMBL
Match: A5ADZ4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028190 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.2e-47
Identity = 157/322 (48.76%), Postives = 181/322 (56.21%), Query Frame = 1 

Query: 19  RPIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDPSAPPPQKQLTLFPLHPENLVEDR 78
           +P RK RTKTR+PKFLSLR EL S   SQ S  T   +      QL LFPLHPENLVED+
Sbjct: 31  KPARKIRTKTRKPKFLSLRLELSSDN-SQESGETMTRNH---HHQLNLFPLHPENLVEDK 90

Query: 79  E---ENVALMFEND----------------VVSSCCSLGSFLPTYHNDMSSEEESRNLAE 138
           +   EN+A  F                    V S  SL   L   +    SEE +     
Sbjct: 91  DMHDENMAYFFAASDGGANLNGLLGGDTGAAVPSGDSLSPSLTYAYGGQDSEEGA----- 150

Query: 139 EAALVRTAMRSREREAGAEEKWVCYSEVVEKKEEPSWTAAAAAAEEEEEEVEEVTSTATK 198
            + LVR A+R+RER+A +EEKWV YSEVVEKKE                  EEVTS A  
Sbjct: 151 -STLVRAALRNRERDA-SEEKWVSYSEVVEKKE------------------EEVTSCAAD 210

Query: 199 KKKKKKKVEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSAWEENRRS 258
              K        ++L LKLDY+ ILNAWS K PLFI GESPQTVP+L  D +       +
Sbjct: 211 LWYKN-----HTQRLSLKLDYQEILNAWSGKGPLFIEGESPQTVPDLAHDAA-------N 270

Query: 259 KMGSEGGGNVWKVPEIGW----------------KVGGREASVLRYKEKRQSRLFSKRIR 306
            MG +G   VWKVPE+G                 K G R+ASVLRYKEKRQ RLFSKRIR
Sbjct: 271 AMG-DGWSGVWKVPEMGGSRSSMKMEEVGGGEGSKKGQRQASVLRYKEKRQXRLFSKRIR 310

[Close]
BLAST of CmoCh04G027900 vs. TrEMBL
Match: A0A067LD08_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10206 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 9.3e-46
Identity = 149/347 (42.94%), Postives = 191/347 (55.04%), Query Frame = 1 

Query: 19  RPIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDPSAPPPQKQ-LTLFPLHPENLVED 78
           +P RKSRT+TR+PK+LSL+ +L SP    +S  T  P+   P KQ L LFPLHPENLV++
Sbjct: 18  KPARKSRTRTRKPKYLSLKLQLSSP----LSKKTQKPTISMPLKQQLNLFPLHPENLVQE 77

Query: 79  REEN--------------VALMFENDVVSSCCSLGSFLP-----------TYHNDMSS-- 138
              N              VA +FE    SS  SL   L            T   D S+  
Sbjct: 78  HNNNNIKEITNDDQVSDHVAFLFETAADSST-SLNGILDSTATTTTTTTTTTEEDGSAPP 137

Query: 139 ---------------EEESRNLAEEAALVRTAMRSREREAGAEEKWVCYSEVVEKKEEPS 198
                          E E R     ++LV+TAM+ +ER+A +EE+WVCY E+VEKK    
Sbjct: 138 RLPLSPSLTYVYIGKESEDRCGDVSSSLVKTAMKCKERDA-SEERWVCYWELVEKKLV-- 197

Query: 199 WTAAAAAAEEEEEEVEEVTSTATKKKKKKKKVEMRGKQ----LRLKLDYEGILNAWSDKA 258
                     E+EEV      A    +K  + + +G      + LKLDY+ ILNAWSDK 
Sbjct: 198 ----------EQEEVSSCCYAAADALEKMVQTQAKGDDKIGLVGLKLDYQQILNAWSDKG 257

Query: 259 PLFINGESPQTVPNLHDDGSAWEENRRSKMGSEGGGNVWKVPEI-------------GWK 306
           PL+I G+SPQ VP++    +A           +G GN+W+VPE+             GWK
Sbjct: 258 PLYIKGDSPQIVPDVLHAHTA---------SMDGWGNLWRVPEMESIKMKDKGEEKEGWK 317

[Close]
BLAST of CmoCh04G027900 vs. TAIR10
Match: AT5G14370.1 (AT5G14370.1 CCT motif family protein)

HSP 1 Score: 147.1 bits (370), Expect = 1.7e-35
Identity = 124/320 (38.75%), Postives = 167/320 (52.19%), Query Frame = 1 

Query: 22  RKSRTKTRRPKFLSLRSELIS-------PRISQISPMTHDPSAPPPQKQLTLFPLHPENL 81
           RK RTKT++PKFLSL+ EL +       PR S+ S   ++      +K+    P   +  
Sbjct: 47  RKIRTKTKKPKFLSLKLELNTSHEINENPR-SKKSKKKNNNKKQSKKKEPDTTPFKEKKR 106

Query: 82  VE--------DREEN-----VALMFENDVVSSCCSLGSFLPTY----------HNDMSSE 141
            E        ++EE       A +F +   S+  S+   LP+            N++S  
Sbjct: 107 AETTTTLGGGEKEEEQYDTVAAYLFNSATDSTISSIHDLLPSSAATDVDCGGERNNLSPY 166

Query: 142 EESRNLAEEAALVRTAMR--SREREAGAEEKWVCYSEVVEKKEEPSWTAAAAAAEEEEEE 201
           +   + +  ++L+RTAMR  + E E   EE+WV YSEVVE+    S T       +  + 
Sbjct: 167 DRQDHGSSSSSLLRTAMRKGASEEEETTEERWVSYSEVVEEVMSRSGTPRCCGGGDGNDG 226

Query: 202 VEEVTSTATKKKKKKKKVEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDD 261
                                   L LKLDYE I+ AWSDK  L+++GE PQTVP+LH  
Sbjct: 227 ---------------------RPSLALKLDYEQIMEAWSDKGTLYVDGEPPQTVPDLHAS 286

Query: 262 GSAWEENRRSKMGSEGGGNVWKVPEIG-----WKVGGREASVLRYKEKRQSRLFSKRIRY 305
              + +      G E G N+W VPE+      W+ G REAS+LRYKEKRQ+RLFSKRIRY
Sbjct: 287 ADGFND------GGEAG-NLWAVPEMETTERLWR-GHREASLLRYKEKRQNRLFSKRIRY 336

[Close]
BLAST of CmoCh04G027900 vs. TAIR10
Match: AT1G25440.1 (AT1G25440.1 B-box type zinc finger protein with CCT domain)

HSP 1 Score: 84.0 bits (206), Expect = 1.8e-16
Identity = 64/156 (41.03%), Postives = 90/156 (57.69%), Query Frame = 1 

Query: 153 EPSWTAAAAAAEEEEEEVEEVTSTATKKKKKKKKVEMRGKQLRLKLDYEGILNAWSDKAP 212
           E S+   ++    EEE ++ V S+     K K+  E     L L+L+Y+ +++ W  + P
Sbjct: 254 ELSFDYESSHKTSEEEVMKNVESSGECVVKVKE--EEHKNVLMLRLNYDSVISTWGGQGP 313

Query: 213 LFINGESPQTVPNLHDDGSAWEENRRSKMGSEGGGNVWKV----PEIGWKVGGREASVLR 272
            + +GE P+   ++    S W      + G E       V    P  G+  GGREA V R
Sbjct: 314 PWSSGEPPERDMDI----SGWPAFSMVENGGESTHQKQYVGGCLPSSGFGDGGREARVSR 373

Query: 273 YKEKRQSRLFSKRIRYQVRKLNAEKRPRMKGRFVKR 305
           Y+EKR++RLFSK+IRY+VRKLNAEKRPRMKGRFVKR
Sbjct: 374 YREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 403

[Close]
BLAST of CmoCh04G027900 vs. TAIR10
Match: AT5G57180.2 (AT5G57180.2 chloroplast import apparatus 2)

HSP 1 Score: 79.0 bits (193), Expect = 5.8e-15
Identity = 75/202 (37.13%), Postives = 101/202 (50.00%), Query Frame = 1 

Query: 128 MRSREREAGAEEKW----VCYSEVVEKKEEPSWTAAAAAAEEEEEEVEEVTSTATKKKKK 187
           +RS  RE    + W    V + ++  + +      A +  +EE+ + ++V  +  K  KK
Sbjct: 244 LRSALRENDDTKLWKIHTVDFEQISPRIQTVKTETAISTVDEEKSDGKKVVISGEKSNKK 303

Query: 188 KKKVEM--------RGKQLR-------------LKLDYEGILNAWSDKAPLFINGESPQT 247
           KKK +M          K L              LKLDY+G+L AWSDK   F        
Sbjct: 304 KKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKLDYDGVLEAWSDKTSPF-------- 363

Query: 248 VPNLHDDGSAWEENRRSKMGSEGGGNVWKVPEIGWKVGGREASVLRYKEKRQSRLFSKRI 305
            P+      A + N R       G +           G REASVLRYKEKR++RLFSK+I
Sbjct: 364 -PDEIQGSEAVDVNARLAQIDLFGDS-----------GMREASVLRYKEKRRTRLFSKKI 423

[Close]
BLAST of CmoCh04G027900 vs. TAIR10
Match: AT1G73870.1 (AT1G73870.1 B-box type zinc finger protein with CCT domain)

HSP 1 Score: 75.9 bits (185), Expect = 4.9e-14
Identity = 56/141 (39.72%), Postives = 80/141 (56.74%), Query Frame = 1 

Query: 164 EEEEEEVEEVTSTATKKKKKKKKVEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTV 223
           +EEEEE +     +    ++    + R   L L+LDY  +++AW +    +  G  P+ +
Sbjct: 247 DEEEEEAKCENGGSKDSDREASNDKDRKTSLFLRLDYGAVISAWDNHGSPWKTGIKPECM 306

Query: 224 PNLHDDGSAWEENRRSKMGSEGGGNVWKVPEIGWKVGGREASVLRYKEKRQSRLFSKRIR 283
              +             M S+G     +  + G   G REA VLRYKEKR++RLFSK+IR
Sbjct: 307 LGGNTCLPHVVGGYEKLMSSDGSVTRQQGRDGGGSDGEREARVLRYKEKRRTRLFSKKIR 366

Query: 284 YQVRKLNAEKRPRMKGRFVKR 305
           Y+VRKLNAE+RPR+KGRFVKR
Sbjct: 367 YEVRKLNAEQRPRIKGRFVKR 387

[Close]
BLAST of CmoCh04G027900 vs. TAIR10
Match: AT1G07050.1 (AT1G07050.1 CCT motif family protein)

HSP 1 Score: 72.0 bits (175), Expect = 7.1e-13
Identity = 64/153 (41.83%), Postives = 86/153 (56.21%), Query Frame = 1 

Query: 164 EEEEEEV-EEVTSTATKKK--------KKKKKVEMRGKQLRLKLDYEGILNAWSD-KAPL 223
           E+E+E+V EE   ++T ++         K    E +   L+L L+++ +++AWSD + PL
Sbjct: 65  EDEDEDVGEEEKRSSTDQEGSSFGFWENKPTDYEDKDLGLKLNLNHQEVIDAWSDHQKPL 124

Query: 224 FINGESPQTVPNLHDDGSA--WEENRRSKMGSEGGGNVWKVPEIGWKVGGREASVLRYKE 283
           + +     T+ N    G     EE R  +                     REASVLRYKE
Sbjct: 125 WTD---TSTLDNSVYRGEVPVIEEKRNMR---------------------REASVLRYKE 184

Query: 284 KRQSRLFSKRIRYQVRKLNAEKRPRMKGRFVKR 305
           KRQSRLFSK+IRYQVRKLNA+KRPR KGRFVKR
Sbjct: 185 KRQSRLFSKKIRYQVRKLNADKRPRFKGRFVKR 193

[Close]
BLAST of CmoCh04G027900 vs. NCBI nr
Match: gi|778703514|ref|XP_004142772.2| (PREDICTED: zinc finger protein CONSTANS-LIKE 6 [Cucumis sativus])

HSP 1 Score: 357.8 bits (917), Expect = 1.8e-95
Identity = 220/330 (66.67%), Postives = 240/330 (72.73%), Query Frame = 1 

Query: 13  HDSVIQRPIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDPSAPPP----QKQLTLFP 72
           +DS+I+ PIRKSRTKTRRPKFLSLR +L SP+     PM H P  PPP    QKQLTLFP
Sbjct: 4   NDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKSP---PMIHHPPLPPPPPPPQKQLTLFP 63

Query: 73  LHPENL-VEDREENVALMFEND--VVSSCCSLGSFLPTYHNDMSSEEESRNLAEEAALVR 132
           LHPENL VEDRE++VA +FEND  V SSCCSL SFLP Y N+MSSEEESRNL EEA LVR
Sbjct: 64  LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEESRNLVEEAELVR 123

Query: 133 TAMRSREREAGAEEKWVCYSEVVEKKEEPSWTAAAAAAEEEEEEVEEVTSTATKKKKKKK 192
           TAMR+RERE G EEKWVCYSEVVEKKEE   + AA      +E V++V     KKKKKK 
Sbjct: 124 TAMRNRERETGVEEKWVCYSEVVEKKEEEVTSTAA------DEWVKKVKMMKKKKKKKKI 183

Query: 193 KVEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDD-----GSAWEENRRSK 252
           K+EM GKQL LKLDYEGILNAW DKAPLFINGESPQTVP+LHDD      S    N    
Sbjct: 184 KMEMIGKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDG 243

Query: 253 MGSEG-----------GGNVWKVPEI--------------GWKVGGREASVLRYKEKRQS 306
           +GSEG             NVWKVPEI              GWK+G REASVLRYKEKRQS
Sbjct: 244 IGSEGHNSSNNTNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMGQREASVLRYKEKRQS 303

[Close]
BLAST of CmoCh04G027900 vs. NCBI nr
Match: gi|659117908|ref|XP_008458850.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 6 [Cucumis melo])

HSP 1 Score: 354.4 bits (908), Expect = 2.0e-94
Identity = 221/333 (66.37%), Postives = 244/333 (73.27%), Query Frame = 1 

Query: 13  HDSVIQRPIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDPSAPPP----QKQLTLFP 72
           +DS+I+ PIRKSRTKTRRPKFLSLR +L SP++    PM H P  PPP    QKQLTLFP
Sbjct: 4   NDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKLP---PMIHHPPPPPPPPPPQKQLTLFP 63

Query: 73  LHPENL-VEDREENVALMFEND--VVSSCCSLGSFLPTYHNDMSSEEESRNLAEEAALVR 132
           LHPENL VEDRE++VA +FEND  V SSCCSL SFLP+Y N+MSSEEESRNLAEEA LVR
Sbjct: 64  LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPSYQNEMSSEEESRNLAEEAELVR 123

Query: 133 TAMRSRER-EAGAEEKWVCYSEVVEKKEEPSWTAAAAAAEEEEEEVEEVTSTATKKKKKK 192
           TAMR+RER E G EEKWVCYSEVVEKKEE   + AA      +E V+++  T  KKKKKK
Sbjct: 124 TAMRNRERPETGVEEKWVCYSEVVEKKEEEVTSTAA------DEWVKKI-KTMKKKKKKK 183

Query: 193 KKVEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDD-----GSAWEENRRS 252
            K+EM GKQL LKLDYEGILNAW DKAPLFINGESPQTVP+LHDD      S    N   
Sbjct: 184 IKMEMIGKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMD 243

Query: 253 KMGSEG-------------GGNVWKVPEI--------------GWKVGGREASVLRYKEK 306
            +GSEG               NVWKVPEI              GWK+G REASVLRYKEK
Sbjct: 244 GIGSEGHNSSNNNYNNNSSSSNVWKVPEIGILKKEGLMLEGKEGWKMGQREASVLRYKEK 303

[Close]
BLAST of CmoCh04G027900 vs. NCBI nr
Match: gi|703157187|ref|XP_010111661.1| (Protein CHLOROPLAST IMPORT APPARATUS 2 [Morus notabilis])

HSP 1 Score: 204.5 bits (519), Expect = 2.6e-49
Identity = 162/363 (44.63%), Postives = 198/363 (54.55%), Query Frame = 1 

Query: 1   MCITNTINNENTHDSVIQ----------RPIRKSRTKTRRPKFLSLRSEL---ISPR-IS 60
           MC  NT+ + + H               +P RKSRTKTR+PKFLSL  E+    +P+  S
Sbjct: 1   MCNKNTLRSPDHHHHHHHHRRRRHHNQLKPARKSRTKTRKPKFLSLSKEIKPQTTPKPTS 60

Query: 61  QISPMTHDPSAPPPQKQLTLFPLHPENLV-EDR-EENVALMFEND-------VVSSCCSL 120
           +I+ MT          QL LFPLHPENLV +DR +E+ AL+F +D         S    L
Sbjct: 61  EITEMTRH------HHQLNLFPLHPENLVCDDRADEDAALLFHSDGGGGGGGAASLSTLL 120

Query: 121 GSFLPTYHNDMSSEEESRNLA-----------------EEAALVRTAMRSREREAGAEEK 180
            +   T +N MSSEE+S + A                 E   LV+TAMR+RER+  +EEK
Sbjct: 121 HTTTTTTNNTMSSEEDSLSYAYEEEELLSYKCGGGGRVEAETLVKTAMRNRERDL-SEEK 180

Query: 181 WVCYSEVVEKKEEPSWTAAAAAAEEEEEEVEEVTSTATKKKKKKKKVEMRGKQLRLKLDY 240
           WVCYSEVVEKKE                E EEVTS++       +   M    L LKLDY
Sbjct: 181 WVCYSEVVEKKEVV--------------EAEEVTSSS-------ETTAMNKGNLSLKLDY 240

Query: 241 EGILNAWSDKAPLFING---ESPQTVPNLHDD-----GSAWEENRRSKMGSEGGGNVWKV 299
           +GILNAWSDK  L+I G   +SPQTVP+LHD       S +        G    GN+WKV
Sbjct: 241 QGILNAWSDKGSLYIQGSDRQSPQTVPDLHDHHDHFFASDYNTANGLMEGWRNAGNLWKV 300

[Close]
BLAST of CmoCh04G027900 vs. NCBI nr
Match: gi|225452242|ref|XP_002268929.1| (PREDICTED: uncharacterized protein LOC100254358 [Vitis vinifera])

HSP 1 Score: 199.5 bits (506), Expect = 8.3e-48
Identity = 158/322 (49.07%), Postives = 182/322 (56.52%), Query Frame = 1 

Query: 19  RPIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDPSAPPPQKQLTLFPLHPENLVEDR 78
           +P RK RTKTR+PKFLSLR EL S   SQ S  T   +      QL LFPLHPENLVED+
Sbjct: 31  KPARKIRTKTRKPKFLSLRLELSSDN-SQESGETMTRNH---HHQLNLFPLHPENLVEDK 90

Query: 79  E---ENVALMFEND----------------VVSSCCSLGSFLPTYHNDMSSEEESRNLAE 138
           +   EN+A  F                    V S  SL   L   +    SEE +     
Sbjct: 91  DMHDENMAYFFAASDGGANLNGLLGGDTGAAVPSGDSLSPSLTYAYGGQDSEEGA----- 150

Query: 139 EAALVRTAMRSREREAGAEEKWVCYSEVVEKKEEPSWTAAAAAAEEEEEEVEEVTSTATK 198
            + LVR A+R+RER+A +EEKWV YSEVVEKKE                  EEVTS A  
Sbjct: 151 -STLVRAALRNRERDA-SEEKWVSYSEVVEKKE------------------EEVTSCAAD 210

Query: 199 KKKKKKKVEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSAWEENRRS 258
              K        ++L LKLDY+ ILNAWS K PLFI GESPQTVP+L  D +       +
Sbjct: 211 LWYKN-----HTQRLSLKLDYQEILNAWSGKGPLFIEGESPQTVPDLAHDAA-------N 270

Query: 259 KMGSEGGGNVWKVPEIGW----------------KVGGREASVLRYKEKRQSRLFSKRIR 306
            MG +G   VWKVPE+G                 K G R+ASVLRYKEKRQSRLFSKRIR
Sbjct: 271 AMG-DGWSGVWKVPEMGGSRSSMKMEEVGGGEGSKKGQRQASVLRYKEKRQSRLFSKRIR 310

[Close]
BLAST of CmoCh04G027900 vs. NCBI nr
Match: gi|296081330|emb|CBI17712.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 199.5 bits (506), Expect = 8.3e-48
Identity = 158/322 (49.07%), Postives = 182/322 (56.52%), Query Frame = 1 

Query: 19  RPIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDPSAPPPQKQLTLFPLHPENLVEDR 78
           +P RK RTKTR+PKFLSLR EL S   SQ S  T   +      QL LFPLHPENLVED+
Sbjct: 39  KPARKIRTKTRKPKFLSLRLELSSDN-SQESGETMTRNH---HHQLNLFPLHPENLVEDK 98

Query: 79  E---ENVALMFEND----------------VVSSCCSLGSFLPTYHNDMSSEEESRNLAE 138
           +   EN+A  F                    V S  SL   L   +    SEE +     
Sbjct: 99  DMHDENMAYFFAASDGGANLNGLLGGDTGAAVPSGDSLSPSLTYAYGGQDSEEGA----- 158

Query: 139 EAALVRTAMRSREREAGAEEKWVCYSEVVEKKEEPSWTAAAAAAEEEEEEVEEVTSTATK 198
            + LVR A+R+RER+A +EEKWV YSEVVEKKE                  EEVTS A  
Sbjct: 159 -STLVRAALRNRERDA-SEEKWVSYSEVVEKKE------------------EEVTSCAAD 218

Query: 199 KKKKKKKVEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSAWEENRRS 258
              K        ++L LKLDY+ ILNAWS K PLFI GESPQTVP+L  D +       +
Sbjct: 219 LWYKN-----HTQRLSLKLDYQEILNAWSGKGPLFIEGESPQTVPDLAHDAA-------N 278

Query: 259 KMGSEGGGNVWKVPEIGW----------------KVGGREASVLRYKEKRQSRLFSKRIR 306
            MG +G   VWKVPE+G                 K G R+ASVLRYKEKRQSRLFSKRIR
Sbjct: 279 AMG-DGWSGVWKVPEMGGSRSSMKMEEVGGGEGSKKGQRQASVLRYKEKRQSRLFSKRIR 318

The following BLAST results are available for this feature:
BLAST of CmoCh04G027900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
COL16_ARATH3.2e-1541.03Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana GN=COL16 PE=2 SV=2[more]
CIA2_ARATH1.0e-1337.13Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana GN=CIA2 PE=2 SV=1[more]
COL7_ARATH8.7e-1339.72Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana GN=COL7 PE=2 SV=1[more]
COL6_ARATH9.0e-1030.86Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana GN=COL6 PE=2 SV=2[more]
HD1_ORYSJ2.1e-0663.64Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2 SV=1[more]
BLAST of CmoCh04G027900 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KR00_CUCSA1.3e-9566.67Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517810 PE=4 SV=1[more]
W9SWY4_9ROSA1.8e-4944.63Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Morus notabilis GN=L484_017689 PE=4 SV... [more]
F6GX66_VITVI5.8e-4849.07Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0219g00220 PE=4 SV=... [more]
A5ADZ4_VITVI2.2e-4748.76Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028190 PE=4 SV=1[more]
A0A067LD08_JATCU9.3e-4642.94Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10206 PE=4 SV=1[more]
BLAST of CmoCh04G027900 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G14370.11.7e-3538.75 CCT motif family protein[more]
AT1G25440.11.8e-1641.03 B-box type zinc finger protein with CCT domain[more]
AT5G57180.25.8e-1537.13 chloroplast import apparatus 2[more]
AT1G73870.14.9e-1439.72 B-box type zinc finger protein with CCT domain[more]
AT1G07050.17.1e-1341.83 CCT motif family protein[more]
BLAST of CmoCh04G027900 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778703514|ref|XP_004142772.2|1.8e-9566.67PREDICTED: zinc finger protein CONSTANS-LIKE 6 [Cucumis sativus][more]
gi|659117908|ref|XP_008458850.1|2.0e-9466.37PREDICTED: zinc finger protein CONSTANS-LIKE 6 [Cucumis melo][more]
gi|703157187|ref|XP_010111661.1|2.6e-4944.63Protein CHLOROPLAST IMPORT APPARATUS 2 [Morus notabilis][more]
gi|225452242|ref|XP_002268929.1|8.3e-4849.07PREDICTED: uncharacterized protein LOC100254358 [Vitis vinifera][more]
gi|296081330|emb|CBI17712.3|8.3e-4849.07unnamed protein product [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010402CCT_domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G027900.1CmoCh04G027900.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010402CCT domainPFAMPF06203CCTcoord: 262..304
score: 2.4
IPR010402CCT domainPROFILEPS51017CCTcoord: 262..304
score: 15
NoneNo IPR availableunknownCoilCoilcoord: 163..183
scor
NoneNo IPR availablePANTHERPTHR31874FAMILY NOT NAMEDcoord: 194..305
score: 1.4

Synteny