Carg04481 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04481
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	zinc finger protein CONSTANS-LIKE 6
Location	Cucurbita_argyrosperma_scaffold_032 : 634689 .. 636421 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCATCACCAACACAATCAACAACGAAAACACCCACGATTCTGTAATCCAACGCCCAATTCGTAAATCCAGAACCAAGACAAGACGACCCAAATTTCTCAGCCTTCGATCGGAGCTTATTTCGCCCAGAATTTCCCAAATTTCCCCGATGACACACGACCCATCAGCGCCGCCGCCGCAGAAACAGCTTACTCTGTTTCCCCTGCATCCGGAGAATTTGGTGGAGGACAGAGAGGAGAACGTGGCGTTGATGTTCGAGAACGACGTCGTGAGCAGCTGCTGCAGCTTAGGGAGTTTCCTTCCGACTTACCACAACGACATGTCGTCAGAGGAAGAGTCGCGTAATTTAGCAGAGGAGGCGGCGCTTGTACGGACGGCGATGAGGAGTCGGGAGAGGGAAGCAGGGGCAGAGGAGAAGTGGGTTTGTTATTCGGAGGTAGTGGAGAAGAAGGAGGAGCCGTCATGGACGGCAGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGTAGAGGAAGTGACGAGCACGGCAACAAAGAAGAAGAAGAAGAAGAAGAAGGTGGAGATGAGGGGGAAACAGCTGAGGTTGAAGCTTGATTACGAGGGGATTTTGAACGCTTGGTCGGATAAAGCTCCGCTTTTTATCAATGGAGAATCGCCGCAGACTGTGCCGAATCTTCACGATGATGGGAGTGCTTGGGAGGAGAATCGGAGATCAAAAATGGGGAGCGAAGGAGGAGGGAATGTGTGGAAAGTGCCGGAGATTGGATGGAAGGTGGGTGGCAGAGAGGCAAGTGTCTTGAGATACAAAGAGAAAAGGCAGAGCAGGCTGTTCTCCAAGCGCATTCGGTATCAAGTTAGAAAACTCAATGCTGAAAAACGTCCAAGAATGAAGGTACTTTCAACTCATATCATATACACATTATTGCATCATTTCCATCTATCTAATTCAAACCAAATATTACATTGAATTCATTAAGGTGTATACCTTTAATAAAATGATTAGGTGTTTGAATTTATCAATCTTATATCCGTTTATATCAATGTCAGTTATATCGATTCACAACAAATAGTTTAGTAGCTAGAATCGGGTGGTTTGTGGATTAATTTTGAAATTTTTTATAGGTTAAAATGGGTGCAATTCATTAGTTGGTTTTCTAGCATTTTCCAATTTGATTATTAAGAATGTATATGAATGAACCAAGATCACATTAGAACGAGAGTGATCTTGAACATAGAATGACTAAAAAAAACTTACAAAATTGATGATCAAGTTGCACGTTCCTTTTTAATGCCTTAAAACGATGTTGGAATGACTCGTATTGATCTGTGGAGGATAATTTTCTCTCTTAAAAGTGAAAAGTATATAAAGCAACTGAGATGTCACTAAGTATTAGATTTTGAATTCTGATCCAAATTTGAATGGTTACCAAAAAGATATTAATTAAATTTTTTTATTTACTGATTTGTTATTATTTCTTTTTTATATATATATTTGATTAAAAACTGATTCCTTTTATCCAAGTATGAATTGACGTTCCTCTCCCTCTCTCTTGCAGGGTCGCTTTGTGAAAAGAAACTGAGAAGGTTTAGAGACATTATTTGGAGATAAGGGCATTCAGGGAAATGTCTTCTCTTTTCTTTATTTTCCACAATTTCAATGTCTTTTTTCCCCCTCTTAAAGATCATGTTGCTTTAAGAAAATATAATTAATGTTAAATAAAAATGTTTATC

mRNA sequence

ATGTGCATCACCAACACAATCAACAACGAAAACACCCACGATTCTGTAATCCAACGCCCAATTCGTAAATCCAGAACCAAGACAAGACGACCCAAATTTCTCAGCCTTCGATCGGAGCTTATTTCGCCCAGAATTTCCCAAATTTCCCCGATGACACACGACCCATCAGCGCCGCCGCCGCAGAAACAGCTTACTCTGTTTCCCCTGCATCCGGAGAATTTGGTGGAGGACAGAGAGGAGAACGTGGCGTTGATGTTCGAGAACGACGTCGTGAGCAGCTGCTGCAGCTTAGGGAGTTTCCTTCCGACTTACCACAACGACATGTCGTCAGAGGAAGAGTCGCGTAATTTAGCAGAGGAGGCGGCGCTTGTACGGACGGCGATGAGGAGTCGGGAGAGGGAAGCAGGGGCAGAGGAGAAGTGGGTTTGTTATTCGGAGGTAGTGGAGAAGAAGGAGGAGCCGTCATGGACGGCAGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGTAGAGGAAGTGACGAGCACGGCAACAAAGAAGAAGAAGAAGAAGAAGAAGGTGGAGATGAGGGGGAAACAGCTGAGGTTGAAGCTTGATTACGAGGGGATTTTGAACGCTTGGTCGGATAAAGCTCCGCTTTTTATCAATGGAGAATCGCCGCAGACTGTGCCGAATCTTCACGATGATGGGAGTGCTTGGGAGGAGAATCGGAGATCAAAAATGGGGAGCGAAGGAGGAGGGAATGTGTGGAAAGTGCCGGAGATTGGATGGAAGGTGGGTGGCAGAGAGGCAAGTGTCTTGAGATACAAAGAGAAAAGGCAGAGCAGGCTGTTCTCCAAGCGCATTCGGTATCAAGTTAGAAAACTCAATGCTGAAAAACGTCCAAGAATGAAGGGTCGCTTTGTGAAAAGAAACTGAGAAGGTTTAGAGACATTATTTGGAGATAAGGGCATTCAGGGAAATGTCTTCTCTTTTCTTTATTTTCCACAATTTCAATGTCTTTTTTCCCCCTCTTAAAGATCATGTTGCTTTAAGAAAATATAATTAATGTTAAATAAAAATGTTTATC

Coding sequence (CDS)

ATGTGCATCACCAACACAATCAACAACGAAAACACCCACGATTCTGTAATCCAACGCCCAATTCGTAAATCCAGAACCAAGACAAGACGACCCAAATTTCTCAGCCTTCGATCGGAGCTTATTTCGCCCAGAATTTCCCAAATTTCCCCGATGACACACGACCCATCAGCGCCGCCGCCGCAGAAACAGCTTACTCTGTTTCCCCTGCATCCGGAGAATTTGGTGGAGGACAGAGAGGAGAACGTGGCGTTGATGTTCGAGAACGACGTCGTGAGCAGCTGCTGCAGCTTAGGGAGTTTCCTTCCGACTTACCACAACGACATGTCGTCAGAGGAAGAGTCGCGTAATTTAGCAGAGGAGGCGGCGCTTGTACGGACGGCGATGAGGAGTCGGGAGAGGGAAGCAGGGGCAGAGGAGAAGTGGGTTTGTTATTCGGAGGTAGTGGAGAAGAAGGAGGAGCCGTCATGGACGGCAGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGTAGAGGAAGTGACGAGCACGGCAACAAAGAAGAAGAAGAAGAAGAAGAAGGTGGAGATGAGGGGGAAACAGCTGAGGTTGAAGCTTGATTACGAGGGGATTTTGAACGCTTGGTCGGATAAAGCTCCGCTTTTTATCAATGGAGAATCGCCGCAGACTGTGCCGAATCTTCACGATGATGGGAGTGCTTGGGAGGAGAATCGGAGATCAAAAATGGGGAGCGAAGGAGGAGGGAATGTGTGGAAAGTGCCGGAGATTGGATGGAAGGTGGGTGGCAGAGAGGCAAGTGTCTTGAGATACAAAGAGAAAAGGCAGAGCAGGCTGTTCTCCAAGCGCATTCGGTATCAAGTTAGAAAACTCAATGCTGAAAAACGTCCAAGAATGAAGGGTCGCTTTGTGAAAAGAAACTGA

Protein sequence

MCITNTINNENTHDSVIQRPIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDPSAPPPQKQLTLFPLHPENLVEDREENVALMFENDVVSSCCSLGSFLPTYHNDMSSEEESRNLAEEAALVRTAMRSREREAGAEEKWVCYSEVVEKKEEPSWTAAAAAAEEEEEEVEEVTSTATKKKKKKKKVEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSAWEENRRSKMGSEGGGNVWKVPEIGWKVGGREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKGRFVKRN

Homology

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BLAST of Carg04481 vs. NCBI nr
Match: XP_022922270.1 (protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita moschata])

HSP 1 Score: 507.3 bits (1305), Expect = 3.6e-140
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 1   MCITNTINNENTHDSVIQRPIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDPSAPPP 60
           MCITNTINNENTHDSVIQRPIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDPSAPPP
Sbjct: 1   MCITNTINNENTHDSVIQRPIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDPSAPPP 60

Query: 61  QKQLTLFPLHPENLVEDREENVALMFENDVVSSCCSLGSFLPTYHNDMSSEEESRNLAEE 120
           QKQLTLFPLHPENLVEDREENVALMFENDVVSSCCSLGSFLPTYHNDMSSEEESRNLAEE
Sbjct: 61  QKQLTLFPLHPENLVEDREENVALMFENDVVSSCCSLGSFLPTYHNDMSSEEESRNLAEE 120

Query: 121 AALVRTAMRSREREAGAEEKWVCYSEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           AALVRTAMRSREREAGAEEKWVCYSEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 AALVRTAMRSREREAGAEEKWVCYSEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSAWEENRRSK 240
           XXXXXXXEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSAWEENRRSK
Sbjct: 181 XXXXXXXEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSAWEENRRSK 240

Query: 241 MGSEGGGNVWKVPEIGWKVGGREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKGR 300
           MGSEGGGNVWKVPEIGWKVGGREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKGR
Sbjct: 241 MGSEGGGNVWKVPEIGWKVGGREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKGR 300

Query: 301 FVKRN 306
           FVKRN
Sbjct: 301 FVKRN 305

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BLAST of Carg04481 vs. NCBI nr
Match: XP_022991153.1 (zinc finger protein CONSTANS-LIKE 6-like [Cucurbita maxima])

HSP 1 Score: 499.2 bits (1284), Expect = 9.9e-138
Identity = 297/305 (97.38%), Postives = 299/305 (98.03%), Query Frame = 0


Query: 1   MCITNTINNENTHDSVIQRPIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDPSAPPP 60
           MCITNTINN+NTHDSVIQRPIRKSRTKTRRPKFLSLRSELISP+ISQISPMTHDPSAPPP
Sbjct: 1   MCITNTINNQNTHDSVIQRPIRKSRTKTRRPKFLSLRSELISPKISQISPMTHDPSAPPP 60

Query: 61  QKQLTLFPLHPENLVEDREENVALMFENDVVSSCCSLGSFLPTYHNDMSSEEESRNLAEE 120
           QKQLTLFPLHPENLVEDREENVALMFENDVVSSCCSLGSFLPTYHNDMSSEEESRNLAEE
Sbjct: 61  QKQLTLFPLHPENLVEDREENVALMFENDVVSSCCSLGSFLPTYHNDMSSEEESRNLAEE 120

Query: 121 AALVRTAMRSREREAGAEEKWVCYSEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           AALVRTAMRSREREAGAEEKWVCYSEV    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 AALVRTAMRSREREAGAEEKWVCYSEV----XXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSAWEENRRSK 240
           XXXXXX EMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGS WEENRRSK
Sbjct: 181 XXXXXXVEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSVWEENRRSK 240

Query: 241 MGSEGGGNVWKVPEIGWKVGGREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKGR 300
           MGSEGGGNVWKVPEIGWKVGGREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKGR
Sbjct: 241 MGSEGGGNVWKVPEIGWKVGGREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKGR 300

Query: 301 FVKRN 306
           FVKRN
Sbjct: 301 FVKRN 301

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BLAST of Carg04481 vs. NCBI nr
Match: XP_023526082.1 (protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 487.3 bits (1253), Expect = 3.9e-134
Identity = 297/307 (96.74%), Postives = 298/307 (97.07%), Query Frame = 0


Query: 1   MCITNTINNENTHDSVIQRPIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDPSAP-- 60
           MCITNTINNENTHDSVIQRPIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDPSAP  
Sbjct: 1   MCITNTINNENTHDSVIQRPIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDPSAPXX 60

Query: 61  PPQKQLTLFPLHPENLVEDREENVALMFENDVVSSCCSLGSFLPTYHNDMSSEEESRNLA 120
             QKQLTLFPLHPENLVEDREENVALMFENDVVSSCCSLGSFLPTYHND+SSEEESRNLA
Sbjct: 61  XXQKQLTLFPLHPENLVEDREENVALMFENDVVSSCCSLGSFLPTYHNDVSSEEESRNLA 120

Query: 121 EEAALVRTAMRSREREAGAEEKWVCYSEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           EEAALVRTAMRSRERE GAEEKWVCYSEV   XXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 EEAALVRTAMRSRERETGAEEKWVCYSEV---XXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSAWEENRR 240
           XXXXXXXXXEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGS WEENRR
Sbjct: 181 XXXXXXXXXEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSVWEENRR 240

Query: 241 SKMGSEGGGNVWKVPEIGWKVGGREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMK 300
           SKMGSEGGGNVWKVPEIGWKVGGREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMK
Sbjct: 241 SKMGSEGGGNVWKVPEIGWKVGGREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMK 300

Query: 301 GRFVKRN 306
           GRFVKRN
Sbjct: 301 GRFVKRN 304

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BLAST of Carg04481 vs. NCBI nr
Match: XP_022133666.1 (zinc finger protein CONSTANS-LIKE 6 [Momordica charantia])

HSP 1 Score: 308.1 bits (788), Expect = 3.2e-80
Identity = 204/335 (60.90%), Postives = 221/335 (65.97%), Query Frame = 0


Query: 1   MCITNTINN----ENTHDSVIQRPIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDPS 60
           MCI N   +     NT++SVI+ PIRK RTKTRRPKFLSL  EL  PR S  +PM+  P 
Sbjct: 1   MCIRNRAQDLGSASNTNNSVIKHPIRKIRTKTRRPKFLSLLLELTPPRNS--TPMSPRPK 60

Query: 61  APPPQK----QLTLFPLHPENLVEDR----EENVALMFENDVVSSCCSLG--SFLPTYHN 120
            P  Q+    QLTLFPLHPEN+VEDR    +ENVALMF +DVVSSCCSL   SFLP+Y N
Sbjct: 61  PPALQEXXXXQLTLFPLHPENMVEDRDSMHDENVALMFNSDVVSSCCSLQSLSFLPSYQN 120

Query: 121 DMSS-EEESRNL-----AEEAA-LVRTAMRSREREAGAEEKWVCYSEVXXXXXXXXXXXX 180
           DMSS EEESRNL     AE  + LVR AMRSREREA  EEKWVCYSEV            
Sbjct: 121 DMSSTEEESRNLVGGREAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTSTA 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXEMRGKQLRLKLDYEGILNAWSDKAPLFINGES 240
                                         + KQ RLKLDYEGILNAWSDKAPL+INGES
Sbjct: 181 ADEWVEKKYINKKKNKMEIIG---------KQKQPRLKLDYEGILNAWSDKAPLYINGES 240

Query: 241 PQTVPNLHDD---GSAWEENRRSKMGSEG-----GGNVWKVPEI-GWKVGGREASVLRYK 300
           PQTVPNLHDD    S    NR   MGSEG        VWKVPE+ GWK+G REASVLRYK
Sbjct: 241 PQTVPNLHDDQIFSSDSLPNRCCGMGSEGXXXXXXXXVWKVPEMEGWKMGQREASVLRYK 300

Query: 301 EKRQSRLFSKRIRYQVRKLNAEKRPRMKGRFVKRN 306
           EKRQSRLFSKRIRYQVRKLNAEKRPRMKGRFVKR+
Sbjct: 301 EKRQSRLFSKRIRYQVRKLNAEKRPRMKGRFVKRS 324

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BLAST of Carg04481 vs. NCBI nr
Match: XP_004142772.2 (PREDICTED: zinc finger protein CONSTANS-LIKE 6 [Cucumis sativus] >KGN51334.1 hypothetical protein Csa_5G517810 [Cucumis sativus])

HSP 1 Score: 303.5 bits (776), Expect = 8.0e-79
Identity = 222/327 (67.89%), Postives = 237/327 (72.48%), Query Frame = 0


Query: 13  HDSVIQRPIRKSRTKTRRPKFLSLRSELISPR-ISQISPMTHDPSAPPPQKQLTLFPLHP 72
           +DS+I+ PIRKSRTKTRRPKFLSLR +L SP+                    LTLFPLHP
Sbjct: 4   NDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKSXXXXXXXXXXXXXXXXXXXLTLFPLHP 63

Query: 73  ENL-VEDREENVALMFEND--VVSSCCSLGSFLPTYHNDMSSEEESRNLAEEAALVRTAM 132
           ENL VEDRE++VA +FEND  V SSCCSL SFLP Y N+MSSEEESRNL EEA LVRTAM
Sbjct: 64  ENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEESRNLVEEAELVRTAM 123

Query: 133 RSREREAGAEEKWVCYSEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 192
           R+RERE G EEKWVCYSEV      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   E
Sbjct: 124 RNRERETGVEEKWVCYSEV------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKME 183

Query: 193 MRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDD-----GSAWEENRRSKMGS 252
           M GKQL LKLDYEGILNAW DKAPLFINGESPQTVP+LHDD      S    N    +GS
Sbjct: 184 MIGKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDGIGS 243

Query: 253 EG-----------GGNVWKVPEI--------------GWKVGGREASVLRYKEKRQSRLF 306
           EG              VWKVPEI              GWK+G REASVLRYKEKRQSRLF
Sbjct: 244 EGHNXXXXXXXXXXXXVWKVPEIGIMKKEELILEGKEGWKMGQREASVLRYKEKRQSRLF 303

[Close]

BLAST of Carg04481 vs. TAIR10
Match: AT5G14370.1 (CCT motif family protein)

HSP 1 Score: 129.0 bits (323), Expect = 4.9e-30
Identity = 73/116 (62.93%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 194 LRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSAWEENRRSKMGSEGGGNVWKVP 253
           L LKLDYE I+ AWSDK  L+++GE PQTVP+LH     + +      G E  GN+W VP
Sbjct: 229 LALKLDYEQIMEAWSDKGTLYVDGEPPQTVPDLHASADGFND------GGE-AGNLWAVP 288

Query: 254 EIG-----WKVGGREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKGRFVKR 305
           E+      W+ G REAS+LRYKEKRQ+RLFSKRIRYQVRKLNAEKRPR+KGRFVKR
Sbjct: 289 EMETTERLWR-GHREASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKR 336

[Close]

BLAST of Carg04481 vs. TAIR10
Match: AT1G25440.1 (B-box type zinc finger protein with CCT domain)

HSP 1 Score: 90.9 bits (224), Expect = 1.5e-18
Identity = 55/115 (47.83%), Postives = 72/115 (62.61%), Query Frame = 0


Query: 194 LRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSAWEENRRSKMGSEGGGNVWKV- 253
           L L+L+Y+ +++ W  + P + +GE P+       D S W      + G E       V 
Sbjct: 293 LMLRLNYDSVISTWGGQGPPWSSGEPPER----DMDISGWPAFSMVENGGESTHQKQYVG 352

Query: 254 ---PEIGWKVGGREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKGRFVKR 305
              P  G+  GGREA V RY+EKR++RLFSK+IRY+VRKLNAEKRPRMKGRFVKR
Sbjct: 353 GCLPSSGFGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 403

[Close]

BLAST of Carg04481 vs. TAIR10
Match: AT5G57180.2 (chloroplast import apparatus 2)

HSP 1 Score: 85.9 bits (211), Expect = 4.7e-17
Identity = 56/109 (51.38%), Postives = 67/109 (61.47%), Query Frame = 0


Query: 196 LKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSAWEENRRSKMGSEGGGNVWKVPEI 255
           LKLDY+G+L AWSDK   F         P+      A + N R       G +       
Sbjct: 337 LKLDYDGVLEAWSDKTSPF---------PDEIQGSEAVDVNARLAQIDLFGDS------- 396

Query: 256 GWKVGGREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKGRFVKR 305
               G REASVLRYKEKR++RLFSK+IRYQVRKLNA++RPRMKGRFV+R
Sbjct: 397 ----GMREASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRR 425

[Close]

BLAST of Carg04481 vs. TAIR10
Match: AT1G73870.1 (B-box type zinc finger protein with CCT domain)

HSP 1 Score: 80.9 bits (198), Expect = 1.5e-15
Identity = 51/115 (44.35%), Postives = 69/115 (60.00%), Query Frame = 0


Query: 190 RGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSAWEENRRSKMGSEGGGNV 249
           R   L L+LDY  +++AW +    +  G  P+ +   +             M S+G    
Sbjct: 273 RKTSLFLRLDYGAVISAWDNHGSPWKTGIKPECMLGGNTCLPHVVGGYEKLMSSDGSVTR 332

Query: 250 WKVPEIGWKVGGREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKGRFVKR 305
            +  + G   G REA VLRYKEKR++RLFSK+IRY+VRKLNAE+RPR+KGRFVKR
Sbjct: 333 QQGRDGGGSDGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKR 387

[Close]

BLAST of Carg04481 vs. TAIR10
Match: AT1G07050.1 (CCT motif family protein)

HSP 1 Score: 79.7 bits (195), Expect = 3.4e-15
Identity = 54/114 (47.37%), Postives = 69/114 (60.53%), Query Frame = 0


Query: 194 LRLKLDYEGILNAWSD-KAPLFINGESPQTVPN--LHDDGSAWEENRRSKMGSEGGGNVW 253
           L+L L+++ +++AWSD + PL+ +     T+ N     +    EE R  +          
Sbjct: 104 LKLNLNHQEVIDAWSDHQKPLWTD---TSTLDNSVYRGEVPVIEEKRNMR---------- 163

Query: 254 KVPEIGWKVGGREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKGRFVKR 305
                      REASVLRYKEKRQSRLFSK+IRYQVRKLNA+KRPR KGRFVKR
Sbjct: 164 -----------REASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFVKR 193

[Close]

BLAST of Carg04481 vs. Swiss-Prot
Match: sp|Q8RWD0|COL16_ARATH (Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE=1 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 2.7e-17
Identity = 55/115 (47.83%), Postives = 72/115 (62.61%), Query Frame = 0


Query: 194 LRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSAWEENRRSKMGSEGGGNVWKV- 253
           L L+L+Y+ +++ W  + P + +GE P+       D S W      + G E       V 
Sbjct: 293 LMLRLNYDSVISTWGGQGPPWSSGEPPER----DMDISGWPAFSMVENGGESTHQKQYVG 352

Query: 254 ---PEIGWKVGGREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKGRFVKR 305
              P  G+  GGREA V RY+EKR++RLFSK+IRY+VRKLNAEKRPRMKGRFVKR
Sbjct: 353 GCLPSSGFGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 403

[Close]

BLAST of Carg04481 vs. Swiss-Prot
Match: sp|Q9LU68|CIA2_ARATH (Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 8.5e-16
Identity = 56/109 (51.38%), Postives = 67/109 (61.47%), Query Frame = 0


Query: 196 LKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSAWEENRRSKMGSEGGGNVWKVPEI 255
           LKLDY+G+L AWSDK   F         P+      A + N R       G +       
Sbjct: 337 LKLDYDGVLEAWSDKTSPF---------PDEIQGSEAVDVNARLAQIDLFGDS------- 396

Query: 256 GWKVGGREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKGRFVKR 305
               G REASVLRYKEKR++RLFSK+IRYQVRKLNA++RPRMKGRFV+R
Sbjct: 397 ----GMREASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRR 425

[Close]

BLAST of Carg04481 vs. Swiss-Prot
Match: sp|Q9C9A9|COL7_ARATH (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.7e-14
Identity = 51/115 (44.35%), Postives = 69/115 (60.00%), Query Frame = 0


Query: 190 RGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSAWEENRRSKMGSEGGGNV 249
           R   L L+LDY  +++AW +    +  G  P+ +   +             M S+G    
Sbjct: 273 RKTSLFLRLDYGAVISAWDNHGSPWKTGIKPECMLGGNTCLPHVVGGYEKLMSSDGSVTR 332

Query: 250 WKVPEIGWKVGGREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKGRFVKR 305
            +  + G   G REA VLRYKEKR++RLFSK+IRY+VRKLNAE+RPR+KGRFVKR
Sbjct: 333 QQGRDGGGSDGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKR 387

[Close]

BLAST of Carg04481 vs. Swiss-Prot
Match: sp|Q8LG76|COL6_ARATH (Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 1.4e-13
Identity = 57/127 (44.88%), Postives = 76/127 (59.84%), Query Frame = 0


Query: 188 EMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQT--VPNLHD-DGSAWEENRRSKMGSE 247
           E + K L L+LDYE +++ W  +         P T  VP+  D D   +  +   + G+E
Sbjct: 283 EKKEKALMLRLDYESVISTWGGQG-------IPWTARVPSEIDLDMVCFPTHTMGESGAE 342

Query: 248 G------GGNVWKVPEIGWKVGGREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMK 306
                   G    + + G   GGREA V RY+EKR++RLFSK+IRY+VRKLNAEKRPRMK
Sbjct: 343 AHHHNHFRGLGLHLGDAG--DGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMK 400

[Close]

BLAST of Carg04481 vs. Swiss-Prot
Match: sp|Q9M9B3|COL8_ARATH (Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 2.7e-09
Identity = 31/44 (70.45%), Postives = 41/44 (93.18%), Query Frame = 0


Query: 262 REASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKGRFVKRN 306
           REA V RY++KR++RLF K+IRY+VRK+NA+KRPRMKGRFV+R+
Sbjct: 271 REARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRS 314

[Close]

BLAST of Carg04481 vs. TrEMBL
Match: tr|A0A0A0KR00|A0A0A0KR00_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517810 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.3e-79
Identity = 222/327 (67.89%), Postives = 237/327 (72.48%), Query Frame = 0


Query: 13  HDSVIQRPIRKSRTKTRRPKFLSLRSELISPR-ISQISPMTHDPSAPPPQKQLTLFPLHP 72
           +DS+I+ PIRKSRTKTRRPKFLSLR +L SP+                    LTLFPLHP
Sbjct: 4   NDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKSXXXXXXXXXXXXXXXXXXXLTLFPLHP 63

Query: 73  ENL-VEDREENVALMFEND--VVSSCCSLGSFLPTYHNDMSSEEESRNLAEEAALVRTAM 132
           ENL VEDRE++VA +FEND  V SSCCSL SFLP Y N+MSSEEESRNL EEA LVRTAM
Sbjct: 64  ENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEESRNLVEEAELVRTAM 123

Query: 133 RSREREAGAEEKWVCYSEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 192
           R+RERE G EEKWVCYSEV      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   E
Sbjct: 124 RNRERETGVEEKWVCYSEV------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKME 183

Query: 193 MRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDD-----GSAWEENRRSKMGS 252
           M GKQL LKLDYEGILNAW DKAPLFINGESPQTVP+LHDD      S    N    +GS
Sbjct: 184 MIGKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDGIGS 243

Query: 253 EG-----------GGNVWKVPEI--------------GWKVGGREASVLRYKEKRQSRLF 306
           EG              VWKVPEI              GWK+G REASVLRYKEKRQSRLF
Sbjct: 244 EGHNXXXXXXXXXXXXVWKVPEIGIMKKEELILEGKEGWKMGQREASVLRYKEKRQSRLF 303

[Close]

BLAST of Carg04481 vs. TrEMBL
Match: tr|A0A1S3C8T7|A0A1S3C8T7_CUCME (zinc finger protein CONSTANS-LIKE 6 OS=Cucumis melo OX=3656 GN=LOC103498130 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.0e-78
Identity = 214/330 (64.85%), Postives = 231/330 (70.00%), Query Frame = 0


Query: 13  HDSVIQRPIRKSRTKTRRPKFLSLRSELISPRI-SQISPMTHDPSAPPPQKQLTLFPLHP 72
           +DS+I+ PIRKSRTKTRRPKFLSLR +L SP++                   LTLFPLHP
Sbjct: 4   NDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKLPXXXXXXXXXXXXXXXXXXLTLFPLHP 63

Query: 73  ENL-VEDREENVALMFEND--VVSSCCSLGSFLPTYHNDMSSEEESRNLAEEAALVRTAM 132
           ENL VEDRE++VA +FEND  V SSCCSL SFLP+Y N+MSSEEESRNLAEEA LVRTAM
Sbjct: 64  ENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPSYQNEMSSEEESRNLAEEAELVRTAM 123

Query: 133 RSRER-EAGAEEKWVCYSEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 192
           R+RER E G EEKWVCYSEV            XXXXXXXX    XXXXXXXXXXXXXX  
Sbjct: 124 RNRERPETGVEEKWVCYSEV-------VEKKEXXXXXXXXDEWVXXXXXXXXXXXXXXKM 183

Query: 193 EMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDD-----GSAWEENRRSKMG 252
           EM GKQL LKLDYEGILNAW DKAPLFINGESPQTVP+LHDD      S    N    +G
Sbjct: 184 EMIGKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDGIG 243

Query: 253 SEG-------------GGNVWKVPEI--------------GWKVGGREASVLRYKEKRQS 306
           SEG                VWKVPEI              GWK+G REASVLRYKEKRQS
Sbjct: 244 SEGHXXXXXXXXXXXXXXXVWKVPEIGILKKEGLMLEGKEGWKMGQREASVLRYKEKRQS 303

[Close]

BLAST of Carg04481 vs. TrEMBL
Match: tr|A0A2R6P935|A0A2R6P935_ACTCH (Zinc finger protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc30580 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.0e-45
Identity = 136/318 (42.77%), Postives = 167/318 (52.52%), Query Frame = 0


Query: 20  PIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDPSAPP----PQKQLTLFPLHPENLV 79
           P RKSR KTR+PKF+SLR +L   +  +   MT  P +       Q+QL LF LHPENLV
Sbjct: 10  PPRKSRPKTRKPKFISLRQQLSPKKNKRSGHMTISPPSAAHXXRHQEQLNLFTLHPENLV 69

Query: 80  EDREENVALMFENDVVSSCCSLGSFLPTYHNDMSSEEESRNLAEEA-------ALVRTAM 139
           +  E+ V   FE                     ++   S   A +A       ALVRTA+
Sbjct: 70  DTHEDIVVRFFEAADXXXXXXXXXXXXXXXXXXNAPSSSLTYAYDAEDSGEGDALVRTAL 129

Query: 140 RSREREAGAEEKWVCYSEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 199
           RS+ER+A ++EKWVCYSEV                                         
Sbjct: 130 RSKERDA-SDEKWVCYSEV---------------------------VEEVTSCAVDLRDT 189

Query: 200 MRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSAWEENRRSKMGSEGGGN 259
           +R + L LKLDY+ ++NAWSDK PL+I+ ESPQTVP+ HD  +  ++      GS GG  
Sbjct: 190 LRTRGLSLKLDYQEVMNAWSDKGPLYIHVESPQTVPDFHDPSNGLQDG----WGSNGG-- 249

Query: 260 VWKVPE---------------------IGWKVGGREASVLRYKEKRQSRLFSKRIRYQVR 306
           +W VPE                       WKVG REASVLRYKEKRQSRLFSKRIRY+VR
Sbjct: 250 LWTVPENIITSGNIKVKEEEILLPNGGEEWKVGAREASVLRYKEKRQSRLFSKRIRYEVR 293

[Close]

BLAST of Carg04481 vs. TrEMBL
Match: tr|F6GX66|F6GX66_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0219g00220 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 9.4e-44
Identity = 143/322 (44.41%), Postives = 169/322 (52.48%), Query Frame = 0


Query: 19  RPIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDPSAPPPQKQLTLFPLHPENLVEDR 78
           +P RK RTKTR+PKFLSLR EL S      S  + +        QL LFPLHPENLVED+
Sbjct: 31  KPARKIRTKTRKPKFLSLRLELSSDN----SQESGETMTRNHHHQLNLFPLHPENLVEDK 90

Query: 79  ---EENVALMF----------------ENDVVSSCCSLGSFLPTYHNDMSSEEESRNLAE 138
              +EN+A  F                    V S  SL   L   +    SEE +     
Sbjct: 91  DMHDENMAYFFAASDGGANLNGLLGGDTGAAVPSGDSLSPSLTYAYGGQDSEEGA----- 150

Query: 139 EAALVRTAMRSREREAGAEEKWVCYSEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 198
            + LVR A+R+RER+A +EEKWV YSEV                                
Sbjct: 151 -STLVRAALRNRERDA-SEEKWVSYSEV-----------------------VEKKEEEVT 210

Query: 199 XXXXXXXXEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSAWEENRRS 258
                   +   ++L LKLDY+ ILNAWS K PLFI GESPQTVP+L  D +       +
Sbjct: 211 SCAADLWYKNHTQRLSLKLDYQEILNAWSGKGPLFIEGESPQTVPDLAHDAA-------N 270

Query: 259 KMGSEGGGNVWKVPEIGW----------------KVGGREASVLRYKEKRQSRLFSKRIR 306
            MG +G   VWKVPE+G                 K G R+ASVLRYKEKRQSRLFSKRIR
Sbjct: 271 AMG-DGWSGVWKVPEMGGSRSSMKMEEVGGGEGSKKGQRQASVLRYKEKRQSRLFSKRIR 310

[Close]

BLAST of Carg04481 vs. TrEMBL
Match: tr|A5ADZ4|A5ADZ4_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_028190 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 3.6e-43
Identity = 142/322 (44.10%), Postives = 168/322 (52.17%), Query Frame = 0


Query: 19  RPIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDPSAPPPQKQLTLFPLHPENLVEDR 78
           +P RK RTKTR+PKFLSLR EL S      S  + +        QL LFPLHPENLVED+
Sbjct: 31  KPARKIRTKTRKPKFLSLRLELSSDN----SQESGETMTRNHHHQLNLFPLHPENLVEDK 90

Query: 79  ---EENVALMF----------------ENDVVSSCCSLGSFLPTYHNDMSSEEESRNLAE 138
              +EN+A  F                    V S  SL   L   +    SEE +     
Sbjct: 91  DMHDENMAYFFAASDGGANLNGLLGGDTGAAVPSGDSLSPSLTYAYGGQDSEEGA----- 150

Query: 139 EAALVRTAMRSREREAGAEEKWVCYSEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 198
            + LVR A+R+RER+A +EEKWV YSEV                                
Sbjct: 151 -STLVRAALRNRERDA-SEEKWVSYSEV-----------------------VEKKEEEVT 210

Query: 199 XXXXXXXXEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDDGSAWEENRRS 258
                   +   ++L LKLDY+ ILNAWS K PLFI GESPQTVP+L  D +       +
Sbjct: 211 SCAADLWYKNHTQRLSLKLDYQEILNAWSGKGPLFIEGESPQTVPDLAHDAA-------N 270

Query: 259 KMGSEGGGNVWKVPEIGW----------------KVGGREASVLRYKEKRQSRLFSKRIR 306
            MG +G   VWKVPE+G                 K G R+ASVLRYKEKRQ RLFSKRIR
Sbjct: 271 AMG-DGWSGVWKVPEMGGSRSSMKMEEVGGGEGSKKGQRQASVLRYKEKRQXRLFSKRIR 310

The following BLAST results are available for this feature:

BLAST of Carg04481 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922270.1	3.6e-140	100.00	protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita moschata]	[more]
XP_022991153.1	9.9e-138	97.38	zinc finger protein CONSTANS-LIKE 6-like [Cucurbita maxima]	[more]
XP_023526082.1	3.9e-134	96.74	protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022133666.1	3.2e-80	60.90	zinc finger protein CONSTANS-LIKE 6 [Momordica charantia]	[more]
XP_004142772.2	8.0e-79	67.89	PREDICTED: zinc finger protein CONSTANS-LIKE 6 [Cucumis sativus] >KGN51334.1 hyp...	[more]

BLAST of Carg04481 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G14370.1	4.9e-30	62.93	CCT motif family protein	[more]
AT1G25440.1	1.5e-18	47.83	B-box type zinc finger protein with CCT domain	[more]
AT5G57180.2	4.7e-17	51.38	chloroplast import apparatus 2	[more]
AT1G73870.1	1.5e-15	44.35	B-box type zinc finger protein with CCT domain	[more]
AT1G07050.1	3.4e-15	47.37	CCT motif family protein	[more]

BLAST of Carg04481 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8RWD0\|COL16_ARATH	2.7e-17	47.83	Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE...	[more]
sp\|Q9LU68\|CIA2_ARATH	8.5e-16	51.38	Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 P...	[more]
sp\|Q9C9A9\|COL7_ARATH	2.7e-14	44.35	Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2...	[more]
sp\|Q8LG76\|COL6_ARATH	1.4e-13	44.88	Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2...	[more]
sp\|Q9M9B3\|COL8_ARATH	2.7e-09	70.45	Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1...	[more]

BLAST of Carg04481 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KR00\|A0A0A0KR00_CUCSA	5.3e-79	67.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517810 PE=4 SV=1	[more]
tr\|A0A1S3C8T7\|A0A1S3C8T7_CUCME	2.0e-78	64.85	zinc finger protein CONSTANS-LIKE 6 OS=Cucumis melo OX=3656 GN=LOC103498130 PE=4...	[more]
tr\|A0A2R6P935\|A0A2R6P935_ACTCH	1.0e-45	42.77	Zinc finger protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY...	[more]
tr\|F6GX66\|F6GX66_VITVI	9.4e-44	44.41	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0219g00220 PE=4 SV=...	[more]
tr\|A5ADZ4\|A5ADZ4_VITVI	3.6e-43	44.10	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_028190 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR010402	CCT_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04481-RA	Carg04481-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 163..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..184
None	No IPR available	PANTHER	PTHR31874	FAMILY NOT NAMED	coord: 7..305
None	No IPR available	PANTHER	PTHR31874:SF18	CCT MOTIF FAMILY PROTEIN	coord: 7..305
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 262..304 e-value: 2.5E-18 score: 65.7
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 262..304 score: 15.715

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg04481	Cla004643	Watermelon (97103) v1	carwmB0679
Carg04481	Csa5G517810	Cucumber (Chinese Long) v2	carcuB0707
Carg04481	MELO3C021608	Melon (DHL92) v3.5.1	carmeB0682
Carg04481	ClCG09G019520	Watermelon (Charleston Gray)	carwcgB0657
Carg04481	CSPI05G17950	Wild cucumber (PI 183967)	carcpiB0721
Carg04481	Cucsa.011020	Cucumber (Gy14) v1	carcgyB0766
Carg04481	CmaCh04G026630	Cucurbita maxima (Rimu)	carcmaB0967
Carg04481	CmaCh15G003740	Cucurbita maxima (Rimu)	carcmaB0961
Carg04481	CmoCh04G027900	Cucurbita moschata (Rifu)	carcmoB0940
Carg04481	CmoCh15G003850	Cucurbita moschata (Rifu)	carcmoB0936
Carg04481	Lsi02G016150	Bottle gourd (USVL1VR-Ls)	carlsiB623
Carg04481	Cp4.1LG13g09080	Cucurbita pepo (Zucchini)	carcpeB0962
Carg04481	Cp4.1LG01g23670	Cucurbita pepo (Zucchini)	carcpeB0965
Carg04481	CsGy5G017630	Cucumber (Gy14) v2	carcgybB0685
Carg04481	MELO3C021608.2	Melon (DHL92) v3.6.1	carmedB0694
Carg04481	CsaV3_5G026860	Cucumber (Chinese Long) v3	carcucB0724
Carg04481	Cla97C09G180960	Watermelon (97103) v2	carwmbB0714
Carg04481	Bhi06G000505	Wax gourd	carwgoB0801

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg04481	Carg02336	Silver-seed gourd	carcarB306

The following block(s) are covering this gene:


Gene	Organism	Block
Carg04481	Silver-seed gourd	carcarB444
Carg04481	Cucurbita maxima (Rimu)	carcmaB0958
Carg04481	Cucurbita maxima (Rimu)	carcmaB0960
Carg04481	Cucurbita moschata (Rifu)	carcmoB0934
Carg04481	Cucurbita moschata (Rifu)	carcmoB0935
Carg04481	Cucurbita pepo (Zucchini)	carcpeB0967
Carg04481	Cucurbita pepo (Zucchini)	carcpeB0969