CsGy5G017630 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCAGGAACGACTCATTAATCAAACACCCAATTCGTAAATCTCGAACCAAAACCAGACGACCCAAATTCCTCAGTCTTCGATTACAGTTAACTTCTCCCAAATCACCACCGATGATCCACCACCCACCACTGCCACCGCCACCTCCTCCGCCTCAGAAACAGCTAACTCTGTTTCCCCTGCATCCGGAGAATCTACAAGTAGAAGACAGAGAAGACGACGTCGCCTTCATCTTCGAAAACGACGATGTCGTAAGTAGCAGCTGCTGCAGCTTACAAAGCTTTCTCCCATGTTACCAAAACGAGATGTCATCGGAGGAAGAGTCTCGGAATTTGGTGGAGGAGGCAGAGCTTGTACGGACGGCGATGAGGAACAGAGAAAGGGAAACGGGGGTGGAGGAGAAATGGGTTTGTTATTCGGAAGTGGTGGAGAAGAAGGAGGAGGAAGTGACGAGTACGGCGGCGGATGAGTGGGTTAAGAAGGTTAAGATGATGAAGAAGAAGAAGAAGAAGAAGAAGATTAAGATGGAGATGATTGGGAAACAGTTATGGTTGAAGCTTGATTATGAAGGGATATTGAACGCTTGGCCTGATAAAGCTCCTCTGTTCATCAATGGAGAATCACCTCAGACCGTTCCTGATCTTCATGATGATCCATATCTCTGCTCTGATTCTCTTCTTAGTGTAAGATCTCTTCTCTTCTTTTCCCATTTATTAGCTTAATGTTTGATAATGTAATACATAAAATTAGAGTCTATAGATTTAGATTTAGTTTAGAAAAGTGTATTTCCTGTCTATTAATCATTCTAAATTACTTTAATGTTTAGTTTTAGACTTTCAAAACCTAACTTTCATCCACTCTTTTTAATCATTTCAAACTCCCTTCTAAACATTTTCACAAAAATCATTCAATTCAGCTTGATTTTGAAATGATTAATATCCTTTTGAAATATGATCTTAGAAATTTCAAAAACACTATCAATATATTAGTATCTCTCATTGATTAAAAGCACTTTTGTATACTTTCACATTGTCATTAGACACCAGAACTATATTCATAAATCATAATCATCACAAACAAGTAAAGTAATTTATTTTAATGATTTCAAACTAACTTCTAAATATACTTGTTAATAGTTAAGAGAGACACGAATTTGTGTGTCTTACGTGAACACTCTTATAATCTATATAAGCAATTTTAGGAGAGTGATATACCAGAATAAGTTCTTTTTCTGAAAAGCAATGTTTATTTAAAAATTTTATAAGTATTTAAACCCTATTTTCTTATGATTTCATTTCGACCGTTTCAAATTCATCTTTTAACATGGGTACTAATTGTCACACATTGAATTTTGTAAATCAAATAAATCAAAACCAAAAAGCAGATAAGAGAAAAAAAAAAGAGTTAGAAATATAAGCTTTTTGTATTCTAATCATAGTTTTGGTATTCAGAGAGGGAAGTGAATTCAGTGTTTGGGCTATGAGGTGCAGTCCAATCCTATAAATACCAATACTTGTGGGGACAAAAAGGATATACTTCAAATTTAAAAGGGGTAGATGTGAAAACTAATTTATCAGCTTTCCAAAAGTAGAAAATAGTTTTTCATTCATATACATACCTTTCTGAATTCCTTGATTTTAAAGCTTATTTGATACTTTTTTTTTGTTTTTTAAATTTTGTTTCAATATCTTTCATGACATATCCTTTTCTATATATATATAAATATATGTTTTGTTTTATGGCTACATTGTTTTTGTTACTATTTTAAAAATAATACAAAAAAAACCTATAACAAGATTATTAAATAAATCTTTAATATTTGAATAAATCTATTGAGGGACTAAACTAATGAGAGTAAGAGGAAAATTAAACAATTGAAAATATAGAAAGTAAAATGAAACAAACATTGAAATATGAGAACCAAAATGATAACTTTTTTAAAGATTAAATGTTATATATGAACAAGTATGTATATAGGAATGATATAGAAGCAGAATGTTATATGTTATATTGAATTGAAGATTATATTTGTGTTTGTATACAGAGAAATGTGATGGATGGAATAGGAAGTGAAGGGCATAATAGCAGTAACAATACTAATAACAATAGCAGCAGTAATGTGTGGAAAGTCCCAGAAATTGGAATAATGAAGAAAGAAGAATTGATATTAGAAGGAAAAGAAGGATGGAAAATGGGCCAGAGAGAGGCGAGTGTTTTGAGATACAAAGAAAAAAGGCAAAGCCGTCTTTTCTCCAAACGTATTCGCTATGAAGTCAGAAAACTCAATGCTGAAAAGCGTCCCAGAATGAAGGTATACTCCCACCCCTTTCATTACAATTTTCATTTTACTAATTCATTTTATCGTTTCATTACAATATTAGTAGATATAATACAACCTAAAAGAATTTGTAAATAAAATACATTTTAGATTTAACTCTCACAATCTGTAAATGTGTATATTGTTTTAGAAGTCTACCGCTCATACGTACATCTTGTCATATTTACAATTCTTTGTAAAGTTATTGTTCACTTAGGACGTGTTTTATGAGTTATATTGAAGTGGGTATGTATGGTAATGCAGTCCAAAACTAACTTTTAGATTTGATTTGTAAAATTCATTTCCATTTTATCTTTAACTACTCACTCGTATCAACGATACTCTCTAATCTAAATTGTTGGCTGTAAAAGCACTCTTTATTATAATTACATTGTGAAATTGAATAGAATAATTTGGTTTGAATTGAGTTTGATGTTGGTTTTGCAGGGTCGTTTTGTGAAAAGAAGTTGAGAAAGTGAAGAAACATATCATTTTGGACATAAAGGGCATTCCAGGAAATGCAGCAATGTAGTGTTCTCTTTTCTTCTTTTAAAATAATTTCATTGTTTTTTTTTTCTCTCTACTTTCATAGATAATATGTTGTAATAATAAAATATGATAAATGTTAAATAAAAAACATTGGTTTAGGGAAAAAAAAAAA ATGTGCAGGAACGACTCATTAATCAAACACCCAATTCGTAAATCTCGAACCAAAACCAGACGACCCAAATTCCTCAGTCTTCGATTACAGTTAACTTCTCCCAAATCACCACCGATGATCCACCACCCACCACTGCCACCGCCACCTCCTCCGCCTCAGAAACAGCTAACTCTGTTTCCCCTGCATCCGGAGAATCTACAAGTAGAAGACAGAGAAGACGACGTCGCCTTCATCTTCGAAAACGACGATGTCGTAAGTAGCAGCTGCTGCAGCTTACAAAGCTTTCTCCCATGTTACCAAAACGAGATGTCATCGGAGGAAGAGTCTCGGAATTTGGTGGAGGAGGCAGAGCTTGTACGGACGGCGATGAGGAACAGAGAAAGGGAAACGGGGGTGGAGGAGAAATGGGTTTGTTATTCGGAAGTGGTGGAGAAGAAGGAGGAGGAAGTGACGAGTACGGCGGCGGATGAGTGGGTTAAGAAGGTTAAGATGATGAAGAAGAAGAAGAAGAAGAAGAAGATTAAGATGGAGATGATTGGGAAACAGTTATGGTTGAAGCTTGATTATGAAGGGATATTGAACGCTTGGCCTGATAAAGCTCCTCTGTTCATCAATGGAGAATCACCTCAGACCGTTCCTGATCTTCATGATGATCCATATCTCTGCTCTGATTCTCTTCTTAGTAGAAATGTGATGGATGGAATAGGAAGTGAAGGGCATAATAGCAGTAACAATACTAATAACAATAGCAGCAGTAATGTGTGGAAAGTCCCAGAAATTGGAATAATGAAGAAAGAAGAATTGATATTAGAAGGAAAAGAAGGATGGAAAATGGGCCAGAGAGAGGCGAGTGTTTTGAGATACAAAGAAAAAAGGCAAAGCCGTCTTTTCTCCAAACGTATTCGCTATGAAGTCAGAAAACTCAATGCTGAAAAGCGTCCCAGAATGAAGGGTCGTTTTGTGAAAAGAAGTTGAGAAAGTGAAGAAACATATCATTTTGGACATAAAGGGCATTCCAGGAAATGCAGCAATGTAGTGTTCTCTTTTCTTCTTTTAAAATAATTTCATTGTTTTTTTTTTCTCTCTACTTTCATAGATAATATGTTGTAATAATAAAATATGATAAATGTTAAATAAAAAACATTGGTTTAGGGAAAAAAAAAAA ATGTGCAGGAACGACTCATTAATCAAACACCCAATTCGTAAATCTCGAACCAAAACCAGACGACCCAAATTCCTCAGTCTTCGATTACAGTTAACTTCTCCCAAATCACCACCGATGATCCACCACCCACCACTGCCACCGCCACCTCCTCCGCCTCAGAAACAGCTAACTCTGTTTCCCCTGCATCCGGAGAATCTACAAGTAGAAGACAGAGAAGACGACGTCGCCTTCATCTTCGAAAACGACGATGTCGTAAGTAGCAGCTGCTGCAGCTTACAAAGCTTTCTCCCATGTTACCAAAACGAGATGTCATCGGAGGAAGAGTCTCGGAATTTGGTGGAGGAGGCAGAGCTTGTACGGACGGCGATGAGGAACAGAGAAAGGGAAACGGGGGTGGAGGAGAAATGGGTTTGTTATTCGGAAGTGGTGGAGAAGAAGGAGGAGGAAGTGACGAGTACGGCGGCGGATGAGTGGGTTAAGAAGGTTAAGATGATGAAGAAGAAGAAGAAGAAGAAGAAGATTAAGATGGAGATGATTGGGAAACAGTTATGGTTGAAGCTTGATTATGAAGGGATATTGAACGCTTGGCCTGATAAAGCTCCTCTGTTCATCAATGGAGAATCACCTCAGACCGTTCCTGATCTTCATGATGATCCATATCTCTGCTCTGATTCTCTTCTTAGTAGAAATGTGATGGATGGAATAGGAAGTGAAGGGCATAATAGCAGTAACAATACTAATAACAATAGCAGCAGTAATGTGTGGAAAGTCCCAGAAATTGGAATAATGAAGAAAGAAGAATTGATATTAGAAGGAAAAGAAGGATGGAAAATGGGCCAGAGAGAGGCGAGTGTTTTGAGATACAAAGAAAAAAGGCAAAGCCGTCTTTTCTCCAAACGTATTCGCTATGAAGTCAGAAAACTCAATGCTGAAAAGCGTCCCAGAATGAAGGGTCGTTTTGTGAAAAGAAGTTGA MCRNDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKSPPMIHHPPLPPPPPPPQKQLTLFPLHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEESRNLVEEAELVRTAMRNRERETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKKVKMMKKKKKKKKIKMEMIGKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDGIGSEGHNSSNNTNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMGQREASVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRS
BLAST of CsGy5G017630 vs. NCBI nr
Match: XP_004142772.2 (PREDICTED: zinc finger protein CONSTANS-LIKE 6 [Cucumis sativus] >KGN51334.1 hypothetical protein Csa_5G517810 [Cucumis sativus]) HSP 1 Score: 497.3 bits (1279), Expect = 4.0e-137 Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0
BLAST of CsGy5G017630 vs. NCBI nr
Match: XP_008458850.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 6 [Cucumis melo]) HSP 1 Score: 464.2 bits (1193), Expect = 3.7e-127 Identity = 304/327 (92.97%), Postives = 306/327 (93.58%), Query Frame = 0
BLAST of CsGy5G017630 vs. NCBI nr
Match: XP_022991153.1 (zinc finger protein CONSTANS-LIKE 6-like [Cucurbita maxima]) HSP 1 Score: 311.2 bits (796), Expect = 4.1e-81 Identity = 223/323 (69.04%), Postives = 239/323 (73.99%), Query Frame = 0
BLAST of CsGy5G017630 vs. NCBI nr
Match: XP_023526082.1 (protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 310.8 bits (795), Expect = 5.3e-81 Identity = 227/325 (69.85%), Postives = 244/325 (75.08%), Query Frame = 0
BLAST of CsGy5G017630 vs. NCBI nr
Match: XP_022922270.1 (protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita moschata]) HSP 1 Score: 307.0 bits (785), Expect = 7.7e-80 Identity = 222/327 (67.89%), Postives = 237/327 (72.48%), Query Frame = 0
BLAST of CsGy5G017630 vs. TAIR10
Match: AT5G14370.1 (CCT motif family protein) HSP 1 Score: 115.2 bits (287), Expect = 7.8e-26 Identity = 72/141 (51.06%), Postives = 82/141 (58.16%), Query Frame = 0
BLAST of CsGy5G017630 vs. TAIR10
Match: AT1G25440.1 (B-box type zinc finger protein with CCT domain) HSP 1 Score: 80.1 bits (196), Expect = 2.8e-15 Identity = 54/151 (35.76%), Postives = 77/151 (50.99%), Query Frame = 0
BLAST of CsGy5G017630 vs. TAIR10
Match: AT1G68520.1 (B-box type zinc finger protein with CCT domain) HSP 1 Score: 77.0 bits (188), Expect = 2.3e-14 Identity = 63/153 (41.18%), Postives = 78/153 (50.98%), Query Frame = 0
BLAST of CsGy5G017630 vs. TAIR10
Match: AT1G07050.1 (CCT motif family protein) HSP 1 Score: 74.3 bits (181), Expect = 1.5e-13 Identity = 42/62 (67.74%), Postives = 50/62 (80.65%), Query Frame = 0
BLAST of CsGy5G017630 vs. TAIR10
Match: AT1G73870.1 (B-box type zinc finger protein with CCT domain) HSP 1 Score: 74.3 bits (181), Expect = 1.5e-13 Identity = 39/50 (78.00%), Postives = 46/50 (92.00%), Query Frame = 0
BLAST of CsGy5G017630 vs. Swiss-Prot
Match: sp|Q8RWD0|COL16_ARATH (Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE=1 SV=2) HSP 1 Score: 80.1 bits (196), Expect = 5.0e-14 Identity = 54/151 (35.76%), Postives = 77/151 (50.99%), Query Frame = 0
BLAST of CsGy5G017630 vs. Swiss-Prot
Match: sp|Q8LG76|COL6_ARATH (Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2 SV=2) HSP 1 Score: 77.0 bits (188), Expect = 4.2e-13 Identity = 63/153 (41.18%), Postives = 78/153 (50.98%), Query Frame = 0
BLAST of CsGy5G017630 vs. Swiss-Prot
Match: sp|Q9C9A9|COL7_ARATH (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.7e-12 Identity = 39/50 (78.00%), Postives = 46/50 (92.00%), Query Frame = 0
BLAST of CsGy5G017630 vs. Swiss-Prot
Match: sp|Q9LU68|CIA2_ARATH (Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 8.0e-12 Identity = 37/45 (82.22%), Postives = 44/45 (97.78%), Query Frame = 0
BLAST of CsGy5G017630 vs. Swiss-Prot
Match: sp|Q9M9B3|COL8_ARATH (Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1 SV=2) HSP 1 Score: 66.2 bits (160), Expect = 7.4e-10 Identity = 33/45 (73.33%), Postives = 42/45 (93.33%), Query Frame = 0
BLAST of CsGy5G017630 vs. TrEMBL
Match: tr|A0A0A0KR00|A0A0A0KR00_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517810 PE=4 SV=1) HSP 1 Score: 497.3 bits (1279), Expect = 2.6e-137 Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0
BLAST of CsGy5G017630 vs. TrEMBL
Match: tr|A0A1S3C8T7|A0A1S3C8T7_CUCME (zinc finger protein CONSTANS-LIKE 6 OS=Cucumis melo OX=3656 GN=LOC103498130 PE=4 SV=1) HSP 1 Score: 464.2 bits (1193), Expect = 2.5e-127 Identity = 304/327 (92.97%), Postives = 306/327 (93.58%), Query Frame = 0
BLAST of CsGy5G017630 vs. TrEMBL
Match: tr|A0A2R6RJI6|A0A2R6RJI6_ACTCH (Zinc finger protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc05619 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 1.4e-45 Identity = 155/337 (45.99%), Postives = 189/337 (56.08%), Query Frame = 0
BLAST of CsGy5G017630 vs. TrEMBL
Match: tr|A0A2I4GPG5|A0A2I4GPG5_9ROSI (uncharacterized protein LOC109009665 OS=Juglans regia OX=51240 GN=LOC109009665 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 1.5e-44 Identity = 139/300 (46.33%), Postives = 166/300 (55.33%), Query Frame = 0
BLAST of CsGy5G017630 vs. TrEMBL
Match: tr|F6GX66|F6GX66_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0219g00220 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 2.0e-44 Identity = 152/335 (45.37%), Postives = 172/335 (51.34%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |