CmoCh01G013600 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G013600
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SAUR-like auxin-responsive protein family
Location	Cmo_Chr01 : 10727520 .. 10728150 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGATAAACTCTCTATTGAGGAAATGCAAGACCCTTTCAAGGCAATTGGGAAGCTTCAGATCCAAATCCAAATCCACAACAGAACATCTCTGGGTTTCTCAAACAAAAATGGAAGAAGAACATCAAGAACATCAAGAACAACATCAAGAACATCAAGAACATGAAAGGCTTCAAAAGGTGAGTAGCAACAATGTAATTATATATGTTGGAAGCACAAGGAAGAGATACTCATTAACTTCAAACCACTTGACCCATCCTTTGTTAACTGCTTTGATCCACAAATCCAAAGCCAATGAAGATTGTGAGACTCATACTCATAACAATAATGCCATTTCATTGAGATGTGAAGTTGTTCTCTTTGATCATCTCTTGTGGATGTTGGAAAACTCTGATCCAAATCTCACTTTTGATTCAAATTTGGAAGAGTTAGCTGAGCTTTATGTGTTTTGATGGTGGGAATTTGAAGCGTTTTTTACCTTGTTCGGGTTAGATATCGAGTATAAAGTGCTCAGATGAAGGGTTTTTTTCCTTTGTTCGGGTTAGGTATCGAGTATAAAGTGCTTATTTGAAGCGTTCTTTTTTTTTTTTTTGTTCGGATTAGGTATCGTATAAATTGTTTATTTGA

mRNA sequence

ATGAAGAAGATAAACTCTCTATTGAGGAAATGCAAGACCCTTTCAAGGCAATTGGGAAGCTTCAGATCCAAATCCAAATCCACAACAGAACATCTCTGGGTTTCTCAAACAAAAATGGAAGAAGAACATCAAGAACATCAAGAACAACATCAAGAACATCAAGAACATGAAAGGCTTCAAAAGGTGAGTAGCAACAATGTAATTATATATGTTGGAAGCACAAGGAAGAGATACTCATTAACTTCAAACCACTTGACCCATCCTTTGTTAACTGCTTTGATCCACAAATCCAAAGCCAATGAAGATTGTGAGACTCATACTCATAACAATAATGCCATTTCATTGAGATGTGAAGTTGTTCTCTTTGATCATCTCTTGTGGATGTTGGAAAACTCTGATCCAAATCTCACTTTTGATTCAAATTTGGAAGAGTTAGCTGAGCTTTATGTATCGTATAAATTGTTTATTTGA

Coding sequence (CDS)

ATGAAGAAGATAAACTCTCTATTGAGGAAATGCAAGACCCTTTCAAGGCAATTGGGAAGCTTCAGATCCAAATCCAAATCCACAACAGAACATCTCTGGGTTTCTCAAACAAAAATGGAAGAAGAACATCAAGAACATCAAGAACAACATCAAGAACATCAAGAACATGAAAGGCTTCAAAAGGTGAGTAGCAACAATGTAATTATATATGTTGGAAGCACAAGGAAGAGATACTCATTAACTTCAAACCACTTGACCCATCCTTTGTTAACTGCTTTGATCCACAAATCCAAAGCCAATGAAGATTGTGAGACTCATACTCATAACAATAATGCCATTTCATTGAGATGTGAAGTTGTTCTCTTTGATCATCTCTTGTGGATGTTGGAAAACTCTGATCCAAATCTCACTTTTGATTCAAATTTGGAAGAGTTAGCTGAGCTTTATGTATCGTATAAATTGTTTATTTGA

Homology

[Close]

BLAST of CmoCh01G013600 vs. TrEMBL
Match: B9RI47_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1576420 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.5e-26
Identity = 80/154 (51.95%), Postives = 100/154 (64.94%), Query Frame = 1


Query: 1   MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEH 60
           MKKIN +LRKCK+LSRQLG   S    +SKST E LW           +H+E+ +EHQ  
Sbjct: 1   MKKINLILRKCKSLSRQLGRSSSYSSLRSKSTREELW----------GDHKEEDEEHQS- 60

Query: 61  ERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLR 120
                       ++VGSTRKRY ++S +L+HPL+ ALI KSK  +  E        + ++
Sbjct: 61  -----------TLFVGSTRKRYVISSKYLSHPLVNALIQKSKQRQGEEI-------LVVK 120

Query: 121 CEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV 151
           CEVVLFDHLLWMLEN+DPNL+FDS LEELAELYV
Sbjct: 121 CEVVLFDHLLWMLENADPNLSFDS-LEELAELYV 124

[Close]

BLAST of CmoCh01G013600 vs. TrEMBL
Match: W9S1R7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002133 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.9e-24
Identity = 75/162 (46.30%), Postives = 101/162 (62.35%), Query Frame = 1


Query: 1   MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEH 60
           MKKINS+LRKCK+LSRQL    S    +SKS+ +  WVS         +H +Q Q+    
Sbjct: 1   MKKINSILRKCKSLSRQLARSSSYSNLRSKSSRQDFWVST-------HDHCDQQQD---- 60

Query: 61  ERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKA------NEDCETH--TH 120
            +L +    +  I+VGS +KRY +++ HL+HPLL ALI KS+       N + + H   +
Sbjct: 61  -QLDEYDQKSATIFVGSAKKRYVISTKHLSHPLLEALIDKSRQKGSSGDNNNIQDHINNN 120

Query: 121 NNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV 151
           NNN + ++CEVVLFDHLLWMLEN+DP      +LEELA LYV
Sbjct: 121 NNNVLVVKCEVVLFDHLLWMLENADPVSLGSESLEELAALYV 150

[Close]

BLAST of CmoCh01G013600 vs. TrEMBL
Match: V4TRE9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023709mg PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-23
Identity = 77/153 (50.33%), Postives = 89/153 (58.17%), Query Frame = 1


Query: 1   MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEH 60
           MKKIN LLRKCK+LSRQLG   S    +SKST + +W  Q  M+    E           
Sbjct: 1   MKKINLLLRKCKSLSRQLGRSSSYSSLRSKSTRDEIWGDQQIMKHAGDE----------- 60

Query: 61  ERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLR 120
                   N   I+VGS RKRY + S +L HPLL ALI KSK         H    I ++
Sbjct: 61  --------NYATIFVGSRRKRYVINSKYLNHPLLNALIEKSKQK-------HGGEFILVK 120

Query: 121 CEVVLFDHLLWMLENSDPNLTFDSNLEELAELY 150
           CEVVLFDHLLWMLEN+DPNL  DS LEELA+LY
Sbjct: 121 CEVVLFDHLLWMLENADPNLILDS-LEELADLY 126

[Close]

BLAST of CmoCh01G013600 vs. TrEMBL
Match: A0A067DWD4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041846mg PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-23
Identity = 77/153 (50.33%), Postives = 89/153 (58.17%), Query Frame = 1


Query: 1   MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEH 60
           MKKI  LLRKCK+LSRQLG   S    +SKST + +W  Q  M+    E           
Sbjct: 1   MKKITLLLRKCKSLSRQLGRSSSYSSLRSKSTRDEIWGDQQIMKHAGDE----------- 60

Query: 61  ERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLR 120
                   N   I+VGSTRKRY + S +L HPLL ALI KSK         H    I ++
Sbjct: 61  --------NYATIFVGSTRKRYVINSKYLNHPLLNALIEKSKQK-------HGGEFILVK 120

Query: 121 CEVVLFDHLLWMLENSDPNLTFDSNLEELAELY 150
           CEVVLFDHLLWMLEN+DPNL  DS LEELA+LY
Sbjct: 121 CEVVLFDHLLWMLENADPNLILDS-LEELADLY 126

[Close]

BLAST of CmoCh01G013600 vs. TrEMBL
Match: B9I0J2_POPTR (Auxin-responsive family protein OS=Populus trichocarpa GN=POPTR_0011s14660g PE=4 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 2.5e-23
Identity = 74/154 (48.05%), Postives = 96/154 (62.34%), Query Frame = 1


Query: 1   MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEH 60
           MKKIN +LRKCK+LSRQLG   S    +SKST E LW        +H++  E H+     
Sbjct: 1   MKKINLILRKCKSLSRQLGRSSSYSSLRSKSTREDLW-------GDHKQEDENHE----- 60

Query: 61  ERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLR 120
                       I+VGSTRKRY ++S +L+HPL+ ALI KS+           +N + ++
Sbjct: 61  -----------TIFVGSTRKRYVISSKYLSHPLVNALIEKSRQKPG------EDNILVVK 120

Query: 121 CEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV 151
           CEVV FDHLLWMLEN+DPN +FDS LEELA+LY+
Sbjct: 121 CEVVFFDHLLWMLENADPNASFDS-LEELADLYM 124

[Close]

BLAST of CmoCh01G013600 vs. TAIR10
Match: AT3G12955.1 (AT3G12955.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11
Identity = 51/149 (34.23%), Postives = 82/149 (55.03%), Query Frame = 1


Query: 3   KINSLLRKCKTLSRQLGSFRSKSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQKV 62
           ++  +LR+CK++S QLG    +S S T     S  +  ++H +  +Q      ++     
Sbjct: 6   RLMMMLRRCKSVSTQLG----RSYSYTSLRSKSARRDPQDHLQDVDQSPTPSMYQT---- 65

Query: 63  SSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLRCEVVLF 122
                 + VG T+K Y ++  HL HPLL AL+ K +  E+ + +   +  I+++CEVVLF
Sbjct: 66  ------VLVGRTKKPYLISKKHLKHPLLNALVEKQQRYEE-DDNEDGSCIITVKCEVVLF 125

Query: 123 DHLLWMLENSDPNLTFDSNLEELAELYVS 152
           DHLLWMLE  D     +S L++ A LY+S
Sbjct: 126 DHLLWMLEYGDEVHILES-LDDFAHLYLS 138

[Close]

BLAST of CmoCh01G013600 vs. TAIR10
Match: AT1G17345.1 (AT1G17345.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 63.9 bits (154), Expect = 9.9e-11
Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 1


Query: 68  IIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLRCEVVLFDHLLW 127
           ++YVG +R+ Y L+S+ + HPL   L+ +S    +     H+   + + CEVVLF+HLLW
Sbjct: 46  VVYVGKSRRPYMLSSHVIAHPLFQELLDRSSRFIE---ERHDQETVLVACEVVLFEHLLW 105

Query: 128 MLENS-----DPNLTFDSNLEELAELY 150
           ML+NS     D +     ++EELAE Y
Sbjct: 106 MLKNSSSDHGDEDDRERGSVEELAEFY 129

[Close]

BLAST of CmoCh01G013600 vs. TAIR10
Match: AT1G72430.1 (AT1G72430.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09
Identity = 32/86 (37.21%), Postives = 49/86 (56.98%), Query Frame = 1


Query: 64  SNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLRCEVVLFD 123
           +N  ++YVG TR+ Y L  + ++HPL   L+ +S +          +  I + CEVVLF+
Sbjct: 41  NNLHVVYVGQTRRPYMLRPDIISHPLFQELVDRSSSRS-----IEQDREIVVACEVVLFE 100

Query: 124 HLLWMLENSDPNLTFDSNLEELAELY 150
           HLLWML++         ++EELAE Y
Sbjct: 101 HLLWMLKSGQEG----GSVEELAEFY 117

[Close]

BLAST of CmoCh01G013600 vs. TAIR10
Match: AT5G20820.1 (AT5G20820.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 56.6 bits (135), Expect = 1.6e-08
Identity = 47/153 (30.72%), Postives = 74/153 (48.37%), Query Frame = 1


Query: 1   MKKINSLLRKCKTLSRQLGSFRSKSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQ 60
           M K  + L K K++ ++L SF +K                        Q      H R  
Sbjct: 1   MAKGGNKLMKLKSVLKKLNSFNTKPN----------------------QPPAQTNHSRSS 60

Query: 61  KVSS----NNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLR 120
            VS+    +   +YVG TR+ Y ++S+ ++HPL   L   +  +  C +    + +IS+ 
Sbjct: 61  AVSAFPSEDLQTVYVGRTRRTYHVSSDVVSHPLFQQL---AAVDGGCGSE---DGSISVS 120

Query: 121 CEVVLFDHLLWMLENSDPNLTFDSNLEELAELY 150
           CEVVLF+HLLWMLEN+D + +   ++ EL E Y
Sbjct: 121 CEVVLFEHLLWMLENADADESRPESVYELVEFY 125

[Close]

BLAST of CmoCh01G013600 vs. NCBI nr
Match: gi|778695308|ref|XP_011653970.1| (PREDICTED: uncharacterized protein LOC105435277 [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 4.9e-36
Identity = 95/161 (59.01%), Postives = 115/161 (71.43%), Query Frame = 1


Query: 1   MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEH 60
           MKKINSLLRKCK+LSRQLG   S    +SKST E LWV + K EE+ ++  EQ       
Sbjct: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCE-KQEEDFEQQIEQ------- 60

Query: 61  ERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKA-------NEDCETHTHN 120
               KVS +NVI+YVGSTRK+Y++ S +L+HPLL ALI KSK+       ++D + H  +
Sbjct: 61  ----KVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDD 120

Query: 121 NNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV 151
              I +RCEVVLFDHLLWMLENSDPN+TFDSNLEELAELYV
Sbjct: 121 EECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYV 149

[Close]

BLAST of CmoCh01G013600 vs. NCBI nr
Match: gi|659087142|ref|XP_008444291.1| (PREDICTED: uncharacterized protein LOC103487659 [Cucumis melo])

HSP 1 Score: 151.8 bits (382), Expect = 1.0e-33
Identity = 94/164 (57.32%), Postives = 114/164 (69.51%), Query Frame = 1


Query: 1   MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEH 60
           MKKINSLLRKCK+LSRQLG   S    +SKST E LWV + + E+  Q+           
Sbjct: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQFD--------- 60

Query: 61  ERLQKVS-SNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANE-----DCETHTHNN 120
              QKVS +NNV++YVGSTRK+Y++ S +L HPLL ALI KSK+ +     D E   H++
Sbjct: 61  ---QKVSGNNNVVLYVGSTRKKYAINSKYLGHPLLNALIDKSKSKKLVDDHDDEHEEHDD 120

Query: 121 ----NAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV 151
               + I +RCEVVLFDHLLWMLENSDPN+TFDSNLEELAELYV
Sbjct: 121 GDDEDCILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYV 152

[Close]

BLAST of CmoCh01G013600 vs. NCBI nr
Match: gi|255544710|ref|XP_002513416.1| (PREDICTED: uncharacterized protein LOC8272635 [Ricinus communis])

HSP 1 Score: 125.6 bits (314), Expect = 7.8e-26
Identity = 80/154 (51.95%), Postives = 100/154 (64.94%), Query Frame = 1


Query: 1   MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEH 60
           MKKIN +LRKCK+LSRQLG   S    +SKST E LW           +H+E+ +EHQ  
Sbjct: 1   MKKINLILRKCKSLSRQLGRSSSYSSLRSKSTREELW----------GDHKEEDEEHQS- 60

Query: 61  ERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLR 120
                       ++VGSTRKRY ++S +L+HPL+ ALI KSK  +  E        + ++
Sbjct: 61  -----------TLFVGSTRKRYVISSKYLSHPLVNALIQKSKQRQGEEI-------LVVK 120

Query: 121 CEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV 151
           CEVVLFDHLLWMLEN+DPNL+FDS LEELAELYV
Sbjct: 121 CEVVLFDHLLWMLENADPNLSFDS-LEELAELYV 124

[Close]

BLAST of CmoCh01G013600 vs. NCBI nr
Match: gi|703147907|ref|XP_010109210.1| (hypothetical protein L484_002133 [Morus notabilis])

HSP 1 Score: 119.4 bits (298), Expect = 5.6e-24
Identity = 75/162 (46.30%), Postives = 101/162 (62.35%), Query Frame = 1


Query: 1   MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEH 60
           MKKINS+LRKCK+LSRQL    S    +SKS+ +  WVS         +H +Q Q+    
Sbjct: 1   MKKINSILRKCKSLSRQLARSSSYSNLRSKSSRQDFWVST-------HDHCDQQQD---- 60

Query: 61  ERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKA------NEDCETH--TH 120
            +L +    +  I+VGS +KRY +++ HL+HPLL ALI KS+       N + + H   +
Sbjct: 61  -QLDEYDQKSATIFVGSAKKRYVISTKHLSHPLLEALIDKSRQKGSSGDNNNIQDHINNN 120

Query: 121 NNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV 151
           NNN + ++CEVVLFDHLLWMLEN+DP      +LEELA LYV
Sbjct: 121 NNNVLVVKCEVVLFDHLLWMLENADPVSLGSESLEELAALYV 150

[Close]

BLAST of CmoCh01G013600 vs. NCBI nr
Match: gi|951072992|ref|XP_014491988.1| (PREDICTED: uncharacterized protein LOC106754486 [Vigna radiata var. radiata])

HSP 1 Score: 117.9 bits (294), Expect = 1.6e-23
Identity = 75/154 (48.70%), Postives = 92/154 (59.74%), Query Frame = 1


Query: 1   MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEH 60
           MKKIN LLRKCK+LSRQLG   S    +SKST E +WV     E+EH E           
Sbjct: 1   MKKINLLLRKCKSLSRQLGRSSSYSSLRSKSTKEDIWVGHGMQEDEHCE----------- 60

Query: 61  ERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLR 120
                       ++VGSTRKRY ++  +L HPLL  LI+KSK        T  ++ + + 
Sbjct: 61  -----------TVFVGSTRKRYVISKKYLNHPLLNELINKSKPKG-----TDESSVLVVN 120

Query: 121 CEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV 151
           CEVVLFDHLLWMLEN+DP  + +S LEELAELYV
Sbjct: 121 CEVVLFDHLLWMLENADPKFSSES-LEELAELYV 126

The following BLAST results are available for this feature:

BLAST of CmoCh01G013600 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh01G013600 vs. TrEMBL


Match Name	E-value	Identity	Description
B9RI47_RICCO	5.5e-26	51.95	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1576420 PE=4 SV=1	[more]
W9S1R7_9ROSA	3.9e-24	46.30	Uncharacterized protein OS=Morus notabilis GN=L484_002133 PE=4 SV=1	[more]
V4TRE9_9ROSI	1.5e-23	50.33	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023709mg PE=4 SV=1	[more]
A0A067DWD4_CITSI	1.5e-23	50.33	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041846mg PE=4 SV=1	[more]
B9I0J2_POPTR	2.5e-23	48.05	Auxin-responsive family protein OS=Populus trichocarpa GN=POPTR_0011s14660g PE=4...	[more]

BLAST of CmoCh01G013600 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12955.1	1.2e-11	34.23	SAUR-like auxin-responsive protein family	[more]
AT1G17345.1	9.9e-11	39.08	SAUR-like auxin-responsive protein family	[more]
AT1G72430.1	1.1e-09	37.21	SAUR-like auxin-responsive protein family	[more]
AT5G20820.1	1.6e-08	30.72	SAUR-like auxin-responsive protein family	[more]

BLAST of CmoCh01G013600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778695308\|ref\|XP_011653970.1\|	4.9e-36	59.01	PREDICTED: uncharacterized protein LOC105435277 [Cucumis sativus]	[more]
gi\|659087142\|ref\|XP_008444291.1\|	1.0e-33	57.32	PREDICTED: uncharacterized protein LOC103487659 [Cucumis melo]	[more]
gi\|255544710\|ref\|XP_002513416.1\|	7.8e-26	51.95	PREDICTED: uncharacterized protein LOC8272635 [Ricinus communis]	[more]
gi\|703147907\|ref\|XP_010109210.1\|	5.6e-24	46.30	hypothetical protein L484_002133 [Morus notabilis]	[more]
gi\|951072992\|ref\|XP_014491988.1\|	1.6e-23	48.70	PREDICTED: uncharacterized protein LOC106754486 [Vigna radiata var. radiata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G013600.1	CmoCh01G013600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 43..129 score: 1.0
None	No IPR available	unknown	Coil	Coil	coord: 36..59 scor
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 1..156 score: 4.0
None	No IPR available	PANTHER	PTHR31374:SF46	SUBFAMILY NOT NAMED	coord: 1..156 score: 4.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G013600	Cucsa.058940	Cucumber (Gy14) v1	cgycmoB0074
CmoCh01G013600	CmaCh09G007380	Cucurbita maxima (Rimu)	cmacmoB051
CmoCh01G013600	Csa4G607030	Cucumber (Chinese Long) v2	cmocuB455
CmoCh01G013600	MELO3C010571	Melon (DHL92) v3.5.1	cmomeB439
CmoCh01G013600	ClCG11G016410	Watermelon (Charleston Gray)	cmowcgB387
CmoCh01G013600	CSPI04G21540	Wild cucumber (PI 183967)	cmocpiB459
CmoCh01G013600	Lsi04G018770	Bottle gourd (USVL1VR-Ls)	cmolsiB415
CmoCh01G013600	Cp4.1LG06g05830	Cucurbita pepo (Zucchini)	cmocpeB469
CmoCh01G013600	Cp4.1LG02g02440	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G013600	MELO3C010571.2	Melon (DHL92) v3.6.1	cmomedB503
CmoCh01G013600	CsaV3_4G031860	Cucumber (Chinese Long) v3	cmocucB0543
CmoCh01G013600	Bhi09G003017	Wax gourd	cmowgoB0620
CmoCh01G013600	Carg14777	Silver-seed gourd	carcmoB0430
CmoCh01G013600	Carg20054	Silver-seed gourd	carcmoB1401

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh01G013600	CmoCh09G007300	Cucurbita moschata (Rifu)	cmocmoB022

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G013600	Watermelon (97103) v2	cmowmbB430
CmoCh01G013600	Cucurbita moschata (Rifu)	cmocmoB013
CmoCh01G013600	Cucurbita maxima (Rimu)	cmacmoB041
CmoCh01G013600	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G013600	Watermelon (97103) v1	cmowmB453
CmoCh01G013600	Cucurbita pepo (Zucchini)	cmocpeB461
CmoCh01G013600	Cucumber (Gy14) v2	cgybcmoB477