CmaCh19G006320 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCTACAGCCTCCGCTACCCTCTCGCCGGCCATATCCACCGCCGCCCCCATCGCCGCCGGCTCTAGGCGGCAGAGGAACACCAATGTCCATTACATCACTGGCCTCAACTCCTTTGGTGGCTTGAAAGCTCACAACAATATCTTCTCCTTGGGCCTTCCCGTTTGTGCCGATCAGTCATTTGCTAACATTGTGAGTTCTTTGAAATACCCATCAAAGGGAAAAGGCAAAAACGGCGGTGGGGCTCTCTCTTCTACCTGTAATGCCGCCGGTGAGATTTTCAGGATCGCCGCCATTATCAATGGGCTTGTTCTTGTTGGAGTGGCGGTGGGGTTTGTTCTTCTCAGGATTGAGGCATCTGTGGAGGAGGCAGAGTGA ATGGCGGCTACAGCCTCCGCTACCCTCTCGCCGGCCATATCCACCGCCGCCCCCATCGCCGCCGGCTCTAGGCGGCAGAGGAACACCAATGTCCATTACATCACTGGCCTCAACTCCTTTGGTGGCTTGAAAGCTCACAACAATATCTTCTCCTTGGGCCTTCCCGTTTGTGCCGATCAGTCATTTGCTAACATTGTGAGTTCTTTGAAATACCCATCAAAGGGAAAAGGCAAAAACGGCGGTGGGGCTCTCTCTTCTACCTGTAATGCCGCCGGTGAGATTTTCAGGATCGCCGCCATTATCAATGGGCTTGTTCTTGTTGGAGTGGCGGTGGGGTTTGTTCTTCTCAGGATTGAGGCATCTGTGGAGGAGGCAGAGTGA ATGGCGGCTACAGCCTCCGCTACCCTCTCGCCGGCCATATCCACCGCCGCCCCCATCGCCGCCGGCTCTAGGCGGCAGAGGAACACCAATGTCCATTACATCACTGGCCTCAACTCCTTTGGTGGCTTGAAAGCTCACAACAATATCTTCTCCTTGGGCCTTCCCGTTTGTGCCGATCAGTCATTTGCTAACATTGTGAGTTCTTTGAAATACCCATCAAAGGGAAAAGGCAAAAACGGCGGTGGGGCTCTCTCTTCTACCTGTAATGCCGCCGGTGAGATTTTCAGGATCGCCGCCATTATCAATGGGCTTGTTCTTGTTGGAGTGGCGGTGGGGTTTGTTCTTCTCAGGATTGAGGCATCTGTGGAGGAGGCAGAGTGA MAATASATLSPAISTAAPIAAGSRRQRNTNVHYITGLNSFGGLKAHNNIFSLGLPVCADQSFANIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLVGVAVGFVLLRIEASVEEAE
BLAST of CmaCh19G006320 vs. Swiss-Prot
Match: PETM_SPIOL (Cytochrome b6-f complex subunit 7 (Fragment) OS=Spinacia oleracea GN=petM PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 7.8e-08 Identity = 30/36 (83.33%), Postives = 34/36 (94.44%), Query Frame = 1
BLAST of CmaCh19G006320 vs. TrEMBL
Match: A0A0A0K4W4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G075020 PE=3 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 5.2e-51 Identity = 111/124 (89.52%), Postives = 118/124 (95.16%), Query Frame = 1
BLAST of CmaCh19G006320 vs. TrEMBL
Match: A0A0D2NR38_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G214600 PE=3 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 1.6e-39 Identity = 98/127 (77.17%), Postives = 109/127 (85.83%), Query Frame = 1
BLAST of CmaCh19G006320 vs. TrEMBL
Match: F6HQF8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g01460 PE=3 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 3.8e-38 Identity = 96/126 (76.19%), Postives = 108/126 (85.71%), Query Frame = 1
BLAST of CmaCh19G006320 vs. TrEMBL
Match: A0A0D2RLR3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G264100 PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 8.6e-38 Identity = 93/125 (74.40%), Postives = 105/125 (84.00%), Query Frame = 1
BLAST of CmaCh19G006320 vs. TrEMBL
Match: A0A061DXT9_THECC (Cytochrome P450 82C4, putative isoform 2 OS=Theobroma cacao GN=TCM_046710 PE=3 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 3.3e-37 Identity = 92/124 (74.19%), Postives = 104/124 (83.87%), Query Frame = 1
BLAST of CmaCh19G006320 vs. TAIR10
Match: AT2G26500.2 (AT2G26500.2 cytochrome b6f complex subunit (petM), putative) HSP 1 Score: 117.9 bits (294), Expect = 4.7e-27 Identity = 73/126 (57.94%), Postives = 89/126 (70.63%), Query Frame = 1
BLAST of CmaCh19G006320 vs. NCBI nr
Match: gi|659109813|ref|XP_008454894.1| (PREDICTED: uncharacterized protein LOC103495201 [Cucumis melo]) HSP 1 Score: 218.0 bits (554), Expect = 9.4e-54 Identity = 117/124 (94.35%), Postives = 120/124 (96.77%), Query Frame = 1
BLAST of CmaCh19G006320 vs. NCBI nr
Match: gi|449438446|ref|XP_004136999.1| (PREDICTED: uncharacterized protein LOC101210164 [Cucumis sativus]) HSP 1 Score: 208.4 bits (529), Expect = 7.4e-51 Identity = 111/124 (89.52%), Postives = 118/124 (95.16%), Query Frame = 1
BLAST of CmaCh19G006320 vs. NCBI nr
Match: gi|700188736|gb|KGN43969.1| (hypothetical protein Csa_7G075020 [Cucumis sativus]) HSP 1 Score: 208.4 bits (529), Expect = 7.4e-51 Identity = 111/124 (89.52%), Postives = 118/124 (95.16%), Query Frame = 1
BLAST of CmaCh19G006320 vs. NCBI nr
Match: gi|823136100|ref|XP_012467803.1| (PREDICTED: uncharacterized protein LOC105786079 [Gossypium raimondii]) HSP 1 Score: 170.2 bits (430), Expect = 2.2e-39 Identity = 98/127 (77.17%), Postives = 109/127 (85.83%), Query Frame = 1
BLAST of CmaCh19G006320 vs. NCBI nr
Match: gi|731383751|ref|XP_010647885.1| (PREDICTED: uncharacterized protein LOC104877276 [Vitis vinifera]) HSP 1 Score: 165.6 bits (418), Expect = 5.5e-38 Identity = 96/126 (76.19%), Postives = 108/126 (85.71%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |