Carg22042 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCTACACCCTCCGCTACCCTCTCGCCGCCCATATCCACCGCCGCCCCCATCGCCGCCGGCTCTAGGCGGCAGAGGAACACCAATGTCCATTACATCACTGGCCTCAACTCCTTTAGTGGCTTGAAAGCTCACAACAATATCACCTCCTTGGGCCTTCCCGTTTGTGCCGATCAGTCATTTGCTAACATTGTGAGCTCTTTGAAATACCCATCAAAGGGTAAAGGCAAAAACGGCGGTGGGGCTCTCTCTTCTACCTGTAATGCCGCCGGTGAGATTTTCAGGATCGCCGCCATTATCAATGGGCTTGTTCTTGTTGGAGTGGCGGTGGGGTTTGTTCTTCTCAGGATTGAGGCATCTGTGGAGGAGGCTGAGTGA ATGGCGGCTACACCCTCCGCTACCCTCTCGCCGCCCATATCCACCGCCGCCCCCATCGCCGCCGGCTCTAGGCGGCAGAGGAACACCAATGTCCATTACATCACTGGCCTCAACTCCTTTAGTGGCTTGAAAGCTCACAACAATATCACCTCCTTGGGCCTTCCCGTTTGTGCCGATCAGTCATTTGCTAACATTGTGAGCTCTTTGAAATACCCATCAAAGGGTAAAGGCAAAAACGGCGGTGGGGCTCTCTCTTCTACCTGTAATGCCGCCGGTGAGATTTTCAGGATCGCCGCCATTATCAATGGGCTTGTTCTTGTTGGAGTGGCGGTGGGGTTTGTTCTTCTCAGGATTGAGGCATCTGTGGAGGAGGCTGAGTGA ATGGCGGCTACACCCTCCGCTACCCTCTCGCCGCCCATATCCACCGCCGCCCCCATCGCCGCCGGCTCTAGGCGGCAGAGGAACACCAATGTCCATTACATCACTGGCCTCAACTCCTTTAGTGGCTTGAAAGCTCACAACAATATCACCTCCTTGGGCCTTCCCGTTTGTGCCGATCAGTCATTTGCTAACATTGTGAGCTCTTTGAAATACCCATCAAAGGGTAAAGGCAAAAACGGCGGTGGGGCTCTCTCTTCTACCTGTAATGCCGCCGGTGAGATTTTCAGGATCGCCGCCATTATCAATGGGCTTGTTCTTGTTGGAGTGGCGGTGGGGTTTGTTCTTCTCAGGATTGAGGCATCTGTGGAGGAGGCTGAGTGA MAATPSATLSPPISTAAPIAAGSRRQRNTNVHYITGLNSFSGLKAHNNITSLGLPVCADQSFANIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLVGVAVGFVLLRIEASVEEAE
BLAST of Carg22042 vs. NCBI nr
Match: XP_022952989.1 (uncharacterized protein LOC111455503 [Cucurbita moschata]) HSP 1 Score: 233.4 bits (594), Expect = 4.2e-58 Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of Carg22042 vs. NCBI nr
Match: XP_023554105.1 (uncharacterized protein LOC111811473 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 226.1 bits (575), Expect = 6.7e-56 Identity = 122/126 (96.83%), Postives = 122/126 (96.83%), Query Frame = 0
BLAST of Carg22042 vs. NCBI nr
Match: XP_022972366.1 (uncharacterized protein LOC111470941 [Cucurbita maxima]) HSP 1 Score: 224.9 bits (572), Expect = 1.5e-55 Identity = 122/126 (96.83%), Postives = 122/126 (96.83%), Query Frame = 0
BLAST of Carg22042 vs. NCBI nr
Match: XP_008454894.1 (PREDICTED: uncharacterized protein LOC103495201 [Cucumis melo]) HSP 1 Score: 213.0 bits (541), Expect = 5.9e-52 Identity = 114/124 (91.94%), Postives = 117/124 (94.35%), Query Frame = 0
BLAST of Carg22042 vs. NCBI nr
Match: XP_004136999.1 (PREDICTED: uncharacterized protein LOC101210164 [Cucumis sativus]) HSP 1 Score: 207.2 bits (526), Expect = 3.2e-50 Identity = 110/124 (88.71%), Postives = 117/124 (94.35%), Query Frame = 0
BLAST of Carg22042 vs. TAIR10
Match: AT2G26500.2 (cytochrome b6f complex subunit (petM), putative) HSP 1 Score: 114.4 bits (285), Expect = 5.1e-26 Identity = 73/127 (57.48%), Postives = 89/127 (70.08%), Query Frame = 0
BLAST of Carg22042 vs. Swiss-Prot
Match: sp|P80883|PETM_SPIOL (Cytochrome b6-f complex subunit 7 (Fragment) OS=Spinacia oleracea OX=3562 GN=petM PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 7.9e-08 Identity = 30/36 (83.33%), Postives = 34/36 (94.44%), Query Frame = 0
BLAST of Carg22042 vs. TrEMBL
Match: tr|A0A1S3C0U4|A0A1S3C0U4_CUCME (uncharacterized protein LOC103495201 OS=Cucumis melo OX=3656 GN=LOC103495201 PE=3 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 3.9e-52 Identity = 114/124 (91.94%), Postives = 117/124 (94.35%), Query Frame = 0
BLAST of Carg22042 vs. TrEMBL
Match: tr|A0A0A0K4W4|A0A0A0K4W4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075020 PE=3 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 2.1e-50 Identity = 110/124 (88.71%), Postives = 117/124 (94.35%), Query Frame = 0
BLAST of Carg22042 vs. TrEMBL
Match: tr|A0A0D2NR38|A0A0D2NR38_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G214600 PE=3 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 2.9e-39 Identity = 97/127 (76.38%), Postives = 108/127 (85.04%), Query Frame = 0
BLAST of Carg22042 vs. TrEMBL
Match: tr|A0A1U8JLX5|A0A1U8JLX5_GOSHI (uncharacterized protein LOC107908570 OS=Gossypium hirsutum OX=3635 GN=LOC107908570 PE=3 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 4.2e-38 Identity = 93/125 (74.40%), Postives = 105/125 (84.00%), Query Frame = 0
BLAST of Carg22042 vs. TrEMBL
Match: tr|A0A1U8KWH3|A0A1U8KWH3_GOSHI (uncharacterized protein LOC107921427 OS=Gossypium hirsutum OX=3635 GN=LOC107921427 PE=3 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 4.2e-38 Identity = 94/126 (74.60%), Postives = 104/126 (82.54%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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