CSPI07G07990 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G07990
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Cytochrome b6-f complex subunit 7
Location	Chr7 : 5683370 .. 5684939 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTAAATACAACAAACACCATATTGATATCAATATCATCATTTTGATTTTGATTTTGATGGGGCTAGTATCCAAAGATATTGAGAAATCTTTAGCAATTCTAATCTGTTTATGAACCACCCAAATTCCTCTTACCTTATCCATTCTTTCTCCATACAAACACTCTTTTCCCCACCCCCACTCCCCCCATCCATTTCTCATCTCATCACTTTCAATTTTCTCTTCCACTCAGGTTCAATCCCTTCCCTTTTTCTCCCTCAAAATCCCCTTTTCCCATCTCAGTTTTCACTCAATATTGACTCTTCCTTCTCTCTTCCTCTTCTTTCAGGCACCATTCCAATGGCTACAGCCTCCGCTACCCTCTCGACGGCCATGTCCTCCGCCGCCCCCATCTCCGCCGGCTCAAGGCGGCAGAGGCAAACCAATGCCCATTTTATTTCTGGGCTTAACTCCTTTAGTGGCTTGAAAGCTCACAACAATGTCGTCTCCTTAGGCCTTCCCGTTTGTGCTGATCAATCATTTGCAAAAATTGTGAGCTCTTTGAAATACCCATCAAAGGGAAAGGGGAAAAACGGCGGTGGAGCTCTTTCTTCCACTTGTAATGCCGCCGGTGAGATTTTCAGGATTGCTGCCATTATCAATGGCCTGGTTCTTATTGGTGTGGCTGTGGGGTTTGTTCTTCTTCGGATCGAAGCATCTGTGGAGGAGGCAGAGTGAAAAGCTACCAAAAATGGTTGATGATGATGAGGATATTGGTCGGTTATCTGAAATTTGTAAGTTAATCTACTTTTACCAGTTATTGTAGAACTCAATTGTTTCCATCAGTCAAAACAATTGACAAAATTCATTTTCCCTATTTCTTTCCCCTGCTTTCTCATTACAAAATAATGGCATTGTAGTATATTGTTCATCTGCTTGAAAAAAGATGCATATTCTTGTAAATTCTTTTTGTGCTGCTTGGATCATGAGAAGAATAAGAAATGAACTTTCCAGGCAATTATTGTAAGATCAACTAGTTCTTTGCGGAGACTGCCAAAACAAAAAATAAAAAACAATAAAAATATGGTTATCAAACGGAGGTTAAGTTAATGTGTTTTTTAATTCACTGTTAATATGTTTTGAAACAACTTTGTCTTAAGTAAACTGAAAGAAAAAGGGAACAAATTGTAAGAAAATGTATCCACATACAATCCATTTCACGCAGTTACTGTTTTGGTAGTAGAAAGTTGGATCGTAAACAATCTCATAAACCAAGCAACCAGCATCTCAAATTGGTGTAAAGAACTTGAATGTTAGTTAGTAGGTTTTTGAACGAAGATTTGTATGAAACTTAGACAGGAGACTGAAATCAAGAATTGTACTTTTGTGTATAGAGTTCAATTTCACTGGAGTAAGCTTTCATGTTTACTCTCAAATAAAGGTTGTCTTGTTGATTATACAAAGCCTAGCGTACATGAAATAGATTCCTGCAATATATGGCTTGAAATTGAACCTTGCTTGATGAACTTATTACTAAGAAGTAAGAGTTGAGGAACATTTTGAATCAACTTAGCTTGACTCAGAGGGAAAGA

mRNA sequence

ATGAACCACCCAAATTCCTCTTACCTTATCCATTCTTTCTCCATACAAACACTCTTTTCCCCACCCCCACTCCCCCCATCCATTTCTCATCTCATCACTTTCAATTTTCTCTTCCACTCAGGTTCAATCCCTTCCCTTTTTCTCCCTCAAAATCCCCTTTTCCCATCTCAGTTTTCACTCAATATTGACTCTTCCTTCTCTCTTCCTCTTCTTTCAGGCACCATTCCAATGGCTACAGCCTCCGCTACCCTCTCGACGGCCATGTCCTCCGCCGCCCCCATCTCCGCCGGCTCAAGGCGGCAGAGGCAAACCAATGCCCATTTTATTTCTGGGCTTAACTCCTTTAGTGGCTTGAAAGCTCACAACAATGTCGTCTCCTTAGGCCTTCCCGTTTGTGCTGATCAATCATTTGCAAAAATTGTGAGCTCTTTGAAATACCCATCAAAGGGAAAGGGGAAAAACGGCGGTGGAGCTCTTTCTTCCACTTGTAATGCCGCCGGTGAGATTTTCAGGATTGCTGCCATTATCAATGGCCTGGTTCTTATTGGTGTGGCTGTGGGGTTTGTTCTTCTTCGGATCGAAGCATCTGTGGAGGAGGCAGAGTGA

Coding sequence (CDS)

ATGAACCACCCAAATTCCTCTTACCTTATCCATTCTTTCTCCATACAAACACTCTTTTCCCCACCCCCACTCCCCCCATCCATTTCTCATCTCATCACTTTCAATTTTCTCTTCCACTCAGGTTCAATCCCTTCCCTTTTTCTCCCTCAAAATCCCCTTTTCCCATCTCAGTTTTCACTCAATATTGACTCTTCCTTCTCTCTTCCTCTTCTTTCAGGCACCATTCCAATGGCTACAGCCTCCGCTACCCTCTCGACGGCCATGTCCTCCGCCGCCCCCATCTCCGCCGGCTCAAGGCGGCAGAGGCAAACCAATGCCCATTTTATTTCTGGGCTTAACTCCTTTAGTGGCTTGAAAGCTCACAACAATGTCGTCTCCTTAGGCCTTCCCGTTTGTGCTGATCAATCATTTGCAAAAATTGTGAGCTCTTTGAAATACCCATCAAAGGGAAAGGGGAAAAACGGCGGTGGAGCTCTTTCTTCCACTTGTAATGCCGCCGGTGAGATTTTCAGGATTGCTGCCATTATCAATGGCCTGGTTCTTATTGGTGTGGCTGTGGGGTTTGTTCTTCTTCGGATCGAAGCATCTGTGGAGGAGGCAGAGTGA

Homology

[Close]

BLAST of CSPI07G07990 vs. Swiss-Prot
Match: PETM_SPIOL (Cytochrome b6-f complex subunit 7 (Fragment) OS=Spinacia oleracea GN=petM PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.5e-08
Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = 1


Query: 164 NAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASVEE 200
           NAA EIFRIAA++NGL L+GVA+GFVLLRIEA+VEE
Sbjct: 1   NAAAEIFRIAAVMNGLTLVGVAIGFVLLRIEATVEE 36

[Close]

BLAST of CSPI07G07990 vs. TrEMBL
Match: A0A0A0K4W4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G075020 PE=3 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 6.0e-102
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1


Query: 1   MNHPNSSYLIHSFSIQTLFSPPPLPPSISHLITFNFLFHSGSIPSLFLPQNPLFPSQFSL 60
           MNHPNSSYLIHSFSIQTLFSPPPLPPSISHLITFNFLFHSGSIPSLFLPQNPLFPSQFSL
Sbjct: 1   MNHPNSSYLIHSFSIQTLFSPPPLPPSISHLITFNFLFHSGSIPSLFLPQNPLFPSQFSL 60

Query: 61  NIDSSFSLPLLSGTIPMATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKA 120
           NIDSSFSLPLLSGTIPMATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKA
Sbjct: 61  NIDSSFSLPLLSGTIPMATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKA 120

Query: 121 HNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLV 180
           HNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLV
Sbjct: 121 HNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLV 180

Query: 181 LIGVAVGFVLLRIEASVEEAE 202
           LIGVAVGFVLLRIEASVEEAE
Sbjct: 181 LIGVAVGFVLLRIEASVEEAE 201

[Close]

BLAST of CSPI07G07990 vs. TrEMBL
Match: F6HQF8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g01460 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.9e-40
Identity = 107/156 (68.59%), Postives = 122/156 (78.21%), Query Frame = 1


Query: 48   LPQNPLFPSQFSLNIDSSFSLPLLSGTIPMATASATLSTAMSSAAPISAGSR--RQRQTN 107
            LP + L  S F  +  SS S   + G I MATASATLS +  SAA I+   R  ++R+TN
Sbjct: 1019 LPSHHLCTSIFEQS--SSTSSHQIVGKIAMATASATLSPSTFSAAAIAGLGRTSQRRKTN 1078

Query: 108  AHFISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNA 167
             HFI GLNSF GLKA+N+V SLGLPVC +QSFAKIV SLK PS+GKG+ GGGALSSTCNA
Sbjct: 1079 VHFIGGLNSFDGLKAYNSVASLGLPVCTEQSFAKIVGSLKSPSQGKGR-GGGALSSTCNA 1138

Query: 168  AGEIFRIAAIINGLVLIGVAVGFVLLRIEASVEEAE 202
             GEIFRIAAI+NGLVL+GVAVGFVLLRIEASVEEAE
Sbjct: 1139 VGEIFRIAAIMNGLVLVGVAVGFVLLRIEASVEEAE 1171

[Close]

BLAST of CSPI07G07990 vs. TrEMBL
Match: A5AN62_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027615 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 8.0e-38
Identity = 96/127 (75.59%), Postives = 108/127 (85.04%), Query Frame = 1


Query: 77  MATASATLSTAMSSAAPISAGSR--RQRQTNAHFISGLNSFSGLKAHNNVVSLGLPVCAD 136
           MATASATLS +  SAA I+   R  ++R+TN HFI GLNSF GLKA+N+V SLGLPVC +
Sbjct: 1   MATASATLSPSTFSAAAIAGLGRTSQRRKTNVHFIGGLNSFDGLKAYNSVASLGLPVCTE 60

Query: 137 QSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIE 196
           QSFAKIV SLK  S+GKG+ GGGALSSTCNA GEIFRIAAI+NGLVL+GVAVGFVLLRIE
Sbjct: 61  QSFAKIVXSLKSXSQGKGR-GGGALSSTCNAVGEIFRIAAIMNGLVLVGVAVGFVLLRIE 120

Query: 197 ASVEEAE 202
           ASVEEAE
Sbjct: 121 ASVEEAE 126

[Close]

BLAST of CSPI07G07990 vs. TrEMBL
Match: A0A0D2NR38_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G214600 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.8e-37
Identity = 93/124 (75.00%), Postives = 107/124 (86.29%), Query Frame = 1


Query: 79  TASATLSTAMSSAAPISAGS-RRQRQTNAHFISGLNSFSGLKAHNNVVSLGLPVCADQSF 138
           TASATLS    + AP S G+ RR+ + N ++I+GLNSF GLKAHNNVVSLG PVC +QSF
Sbjct: 4   TASATLSPP--TLAPASVGNPRRRTKVNVNYITGLNSFGGLKAHNNVVSLGQPVCIEQSF 63

Query: 139 AKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASV 198
           AK+VSSL+ PSKGKG +GGGALSSTCNA GEIFRIAAI+NGLVL+GVAVGFVLLRIEAS+
Sbjct: 64  AKVVSSLRAPSKGKG-SGGGALSSTCNAVGEIFRIAAIMNGLVLVGVAVGFVLLRIEASL 123

Query: 199 EEAE 202
           EEAE
Sbjct: 124 EEAE 124

[Close]

BLAST of CSPI07G07990 vs. TrEMBL
Match: A0A061DXT9_THECC (Cytochrome P450 82C4, putative isoform 2 OS=Theobroma cacao GN=TCM_046710 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.2e-36
Identity = 92/125 (73.60%), Postives = 104/125 (83.20%), Query Frame = 1


Query: 77  MATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKAHNNVVSLGLPVCADQS 136
           MATASATLS    +AA + +  RR    N  +ISGLN+F GLKAHNNVVSLGLPVC +QS
Sbjct: 1   MATASATLSPVTLAAATVISPGRRT-SVNVKYISGLNAFGGLKAHNNVVSLGLPVCTEQS 60

Query: 137 FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 196
           FAK+VSSL+ PSKGKG   GGALSSTCNA GEIFRIAAI+NGLVL+GVAVGFVLLRIEAS
Sbjct: 61  FAKVVSSLRAPSKGKG---GGALSSTCNAVGEIFRIAAIMNGLVLVGVAVGFVLLRIEAS 120

Query: 197 VEEAE 202
           +EEA+
Sbjct: 121 LEEAD 121

[Close]

BLAST of CSPI07G07990 vs. TAIR10
Match: AT2G26500.2 (AT2G26500.2 cytochrome b6f complex subunit (petM), putative)

HSP 1 Score: 115.5 bits (288), Expect = 3.7e-26
Identity = 70/126 (55.56%), Postives = 88/126 (69.84%), Query Frame = 1


Query: 78  ATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKAHNN-VVSLGLPVCADQS 137
           A A A +S   S     S  ++++ +    +I+GLNS+ GLKA NN VVS+G P+C +Q 
Sbjct: 4   AAAPAVISWTRSGIVSKSGQTQKKSEMKVSYITGLNSYGGLKAQNNKVVSMGSPLCTEQC 63

Query: 138 FAKIVSSLKYPSKGKGKNG-GGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEA 197
           FA +V SLK      G+ G GGALS+TCNA GEIF+IAAI+N L L+GVAVGFVLLRIE 
Sbjct: 64  FANVVMSLK------GRRGNGGALSTTCNAVGEIFKIAAIMNALTLVGVAVGFVLLRIET 123

Query: 198 SVEEAE 202
           SVEEAE
Sbjct: 124 SVEEAE 123

[Close]

BLAST of CSPI07G07990 vs. NCBI nr
Match: gi|700188736|gb|KGN43969.1| (hypothetical protein Csa_7G075020 [Cucumis sativus])

HSP 1 Score: 378.3 bits (970), Expect = 8.7e-102
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1


Query: 1   MNHPNSSYLIHSFSIQTLFSPPPLPPSISHLITFNFLFHSGSIPSLFLPQNPLFPSQFSL 60
           MNHPNSSYLIHSFSIQTLFSPPPLPPSISHLITFNFLFHSGSIPSLFLPQNPLFPSQFSL
Sbjct: 1   MNHPNSSYLIHSFSIQTLFSPPPLPPSISHLITFNFLFHSGSIPSLFLPQNPLFPSQFSL 60

Query: 61  NIDSSFSLPLLSGTIPMATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKA 120
           NIDSSFSLPLLSGTIPMATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKA
Sbjct: 61  NIDSSFSLPLLSGTIPMATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKA 120

Query: 121 HNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLV 180
           HNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLV
Sbjct: 121 HNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLV 180

Query: 181 LIGVAVGFVLLRIEASVEEAE 202
           LIGVAVGFVLLRIEASVEEAE
Sbjct: 181 LIGVAVGFVLLRIEASVEEAE 201

[Close]

BLAST of CSPI07G07990 vs. NCBI nr
Match: gi|449438446|ref|XP_004136999.1| (PREDICTED: uncharacterized protein LOC101210164 [Cucumis sativus])

HSP 1 Score: 301.6 bits (771), Expect = 1.0e-78
Identity = 169/201 (84.08%), Postives = 169/201 (84.08%), Query Frame = 1


Query: 1   MNHPNSSYLIHSFSIQTLFSPPPLPPSISHLITFNFLFHSGSIPSLFLPQNPLFPSQFSL 60
           MNHPNSSYLIHSFSIQTLFSPPPLPPSISHLITFNFLFH                     
Sbjct: 1   MNHPNSSYLIHSFSIQTLFSPPPLPPSISHLITFNFLFH--------------------- 60

Query: 61  NIDSSFSLPLLSGTIPMATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKA 120
                      SGTIPMATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKA
Sbjct: 61  -----------SGTIPMATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKA 120

Query: 121 HNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLV 180
           HNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLV
Sbjct: 121 HNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLV 169

Query: 181 LIGVAVGFVLLRIEASVEEAE 202
           LIGVAVGFVLLRIEASVEEAE
Sbjct: 181 LIGVAVGFVLLRIEASVEEAE 169

[Close]

BLAST of CSPI07G07990 vs. NCBI nr
Match: gi|659109813|ref|XP_008454894.1| (PREDICTED: uncharacterized protein LOC103495201 [Cucumis melo])

HSP 1 Score: 221.1 bits (562), Expect = 1.8e-54
Identity = 119/125 (95.20%), Postives = 123/125 (98.40%), Query Frame = 1


Query: 77  MATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKAHNNVVSLGLPVCADQS 136
           MATASATLSTAMS+AAPI+AGSRRQRQTN H+I+GLNSF GLKAHNNVVSLGLPVCADQS
Sbjct: 1   MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQS 60

Query: 137 FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 196
           FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS
Sbjct: 61  FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 120

Query: 197 VEEAE 202
           VEEAE
Sbjct: 121 VEEAE 125

[Close]

BLAST of CSPI07G07990 vs. NCBI nr
Match: gi|731383751|ref|XP_010647885.1| (PREDICTED: uncharacterized protein LOC104877276 [Vitis vinifera])

HSP 1 Score: 168.7 bits (426), Expect = 1.0e-38
Identity = 97/127 (76.38%), Postives = 109/127 (85.83%), Query Frame = 1


Query: 77  MATASATLSTAMSSAAPISAGSR--RQRQTNAHFISGLNSFSGLKAHNNVVSLGLPVCAD 136
           MATASATLS +  SAA I+   R  ++R+TN HFI GLNSF GLKA+N+V SLGLPVC +
Sbjct: 1   MATASATLSPSTFSAAAIAGLGRTSQRRKTNVHFIGGLNSFDGLKAYNSVASLGLPVCTE 60

Query: 137 QSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIE 196
           QSFAKIV SLK PS+GKG+ GGGALSSTCNA GEIFRIAAI+NGLVL+GVAVGFVLLRIE
Sbjct: 61  QSFAKIVGSLKSPSQGKGR-GGGALSSTCNAVGEIFRIAAIMNGLVLVGVAVGFVLLRIE 120

Query: 197 ASVEEAE 202
           ASVEEAE
Sbjct: 121 ASVEEAE 126

[Close]

BLAST of CSPI07G07990 vs. NCBI nr
Match: gi|147855053|emb|CAN82364.1| (hypothetical protein VITISV_027615 [Vitis vinifera])

HSP 1 Score: 165.2 bits (417), Expect = 1.2e-37
Identity = 96/127 (75.59%), Postives = 108/127 (85.04%), Query Frame = 1


Query: 77  MATASATLSTAMSSAAPISAGSR--RQRQTNAHFISGLNSFSGLKAHNNVVSLGLPVCAD 136
           MATASATLS +  SAA I+   R  ++R+TN HFI GLNSF GLKA+N+V SLGLPVC +
Sbjct: 1   MATASATLSPSTFSAAAIAGLGRTSQRRKTNVHFIGGLNSFDGLKAYNSVASLGLPVCTE 60

Query: 137 QSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIE 196
           QSFAKIV SLK  S+GKG+ GGGALSSTCNA GEIFRIAAI+NGLVL+GVAVGFVLLRIE
Sbjct: 61  QSFAKIVXSLKSXSQGKGR-GGGALSSTCNAVGEIFRIAAIMNGLVLVGVAVGFVLLRIE 120

Query: 197 ASVEEAE 202
           ASVEEAE
Sbjct: 121 ASVEEAE 126

The following BLAST results are available for this feature:

BLAST of CSPI07G07990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PETM_SPIOL	9.5e-08	80.56	Cytochrome b6-f complex subunit 7 (Fragment) OS=Spinacia oleracea GN=petM PE=1 S...	[more]

BLAST of CSPI07G07990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4W4_CUCSA	6.0e-102	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G075020 PE=3 SV=1	[more]
F6HQF8_VITVI	3.9e-40	68.59	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g01460 PE=3 SV=...	[more]
A5AN62_VITVI	8.0e-38	75.59	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027615 PE=3 SV=1	[more]
A0A0D2NR38_GOSRA	6.8e-37	75.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G214600 PE=3 SV=1	[more]
A0A061DXT9_THECC	1.2e-36	73.60	Cytochrome P450 82C4, putative isoform 2 OS=Theobroma cacao GN=TCM_046710 PE=3 S...	[more]

BLAST of CSPI07G07990 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G26500.2	3.7e-26	55.56	cytochrome b6f complex subunit (petM), putative	[more]

BLAST of CSPI07G07990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700188736\|gb\|KGN43969.1\|	8.7e-102	100.00	hypothetical protein Csa_7G075020 [Cucumis sativus]	[more]
gi\|449438446\|ref\|XP_004136999.1\|	1.0e-78	84.08	PREDICTED: uncharacterized protein LOC101210164 [Cucumis sativus]	[more]
gi\|659109813\|ref\|XP_008454894.1\|	1.8e-54	95.20	PREDICTED: uncharacterized protein LOC103495201 [Cucumis melo]	[more]
gi\|731383751\|ref\|XP_010647885.1\|	1.0e-38	76.38	PREDICTED: uncharacterized protein LOC104877276 [Vitis vinifera]	[more]
gi\|147855053\|emb\|CAN82364.1\|	1.2e-37	75.59	hypothetical protein VITISV_027615 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012595	PetM_cyt_b6/f_cplx_su7
IPR012595	PetM_cyt_b6/f_cplx_su7

Vocabulary: **Cellular Component**
Term	Definition
GO:0009512	cytochrome b6f complex
GO:0009512	cytochrome b6f complex

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0009512	cytochrome b6f complex
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G07990.1	CSPI07G07990.1	mRNA
CSPI07G07990.2	CSPI07G07990.2	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012595	PetM of cytochrome b6/f complex subunit 7	HAMAP	MF_00396	Cytb6_f_PetM	coord: 133..165 score: 13
IPR012595	PetM of cytochrome b6/f complex subunit 7	PFAM	PF08041	PetM	coord: 135..162 score: 1.
None	No IPR available	PANTHER	PTHR34951	FAMILY NOT NAMED	coord: 46..169 score: 1.2
None	No IPR available	PANTHER	PTHR34951:SF1	SUBFAMILY NOT NAMED	coord: 46..169 score: 1.2
None	No IPR available	unknown	SSF103441	PetM subunit of the cytochrome b6f complex	coord: 134..166 score: 7.85

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G07990	Cla015978	Watermelon (97103) v1	cpiwmB623
CSPI07G07990	Csa7G075020	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G07990	MELO3C018419	Melon (DHL92) v3.5.1	cpimeB538
CSPI07G07990	ClCG02G005540	Watermelon (Charleston Gray)	cpiwcgB576
CSPI07G07990	Lsi11G010420	Bottle gourd (USVL1VR-Ls)	cpilsiB507
CSPI07G07990	MELO3C018419.2	Melon (DHL92) v3.6.1	cpimedB523
CSPI07G07990	CsaV3_7G010090	Cucumber (Chinese Long) v3	cpicucB415
CSPI07G07990	Cla97C02G032530	Watermelon (97103) v2	cpiwmbB554
CSPI07G07990	Bhi05G001029	Wax gourd	cpiwgoB674
CSPI07G07990	Cucsa.220200	Cucumber (Gy14) v1	cgycpiB336
CSPI07G07990	CmaCh19G006320	Cucurbita maxima (Rimu)	cmacpiB534
CSPI07G07990	CmoCh19G006480	Cucurbita moschata (Rifu)	cmocpiB525
CSPI07G07990	CsGy7G007540	Cucumber (Gy14) v2	cgybcpiB332
CSPI07G07990	Carg22042	Silver-seed gourd	carcpiB0239

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G07990	Cucurbita maxima (Rimu)	cmacpiB143
CSPI07G07990	Cucurbita maxima (Rimu)	cmacpiB898
CSPI07G07990	Cucurbita moschata (Rifu)	cmocpiB136
CSPI07G07990	Cucurbita moschata (Rifu)	cmocpiB877
CSPI07G07990	Cucumber (Chinese Long) v2	cpicuB330
CSPI07G07990	Cucumber (Chinese Long) v2	cpicuB334
CSPI07G07990	Melon (DHL92) v3.5.1	cpimeB558
CSPI07G07990	Watermelon (Charleston Gray)	cpiwcgB552
CSPI07G07990	Watermelon (Charleston Gray)	cpiwcgB601
CSPI07G07990	Watermelon (97103) v1	cpiwmB584
CSPI07G07990	Watermelon (97103) v1	cpiwmB597
CSPI07G07990	Cucurbita pepo (Zucchini)	cpecpiB258
CSPI07G07990	Cucurbita pepo (Zucchini)	cpecpiB697
CSPI07G07990	Bottle gourd (USVL1VR-Ls)	cpilsiB502
CSPI07G07990	Bottle gourd (USVL1VR-Ls)	cpilsiB552
CSPI07G07990	Melon (DHL92) v3.6.1	cpimedB542
CSPI07G07990	Melon (DHL92) v3.6.1	cpimedB561
CSPI07G07990	Cucumber (Gy14) v2	cgybcpiB088
CSPI07G07990	Cucumber (Gy14) v2	cgybcpiB091
CSPI07G07990	Silver-seed gourd	carcpiB0849
CSPI07G07990	Cucumber (Chinese Long) v3	cpicucB390
CSPI07G07990	Watermelon (97103) v2	cpiwmbB580
CSPI07G07990	Watermelon (97103) v2	cpiwmbB595
CSPI07G07990	Wild cucumber (PI 183967)	cpicpiB091
CSPI07G07990	Wild cucumber (PI 183967)	cpicpiB094