CmaCh18G006510 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh18G006510
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
Descriptionstructural constituent of ribosome
LocationCma_Chr18 : 5921808 .. 5922566 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCCTGTGGAAGCCTGCAACACATCTTCGAAACCCCATTACCGGAGAATCCAACCCTTCTCGACACACTCTCGTCATGGAGCCAGATTATATCTGTGACGCCATCACAACAGCAATCGTCGTTTACAGAGATTTTTGGAGAGCTTCATTTCAAAGAGAGTTTTGTTCCTCCTTTGTCACCTCAGTTGTCTTTGACAGAATCGAACTCTCCGTCTCCTGCTGCTGCCACCGTTGATATCATCCCATGGAAAGAACCGTCGTCAAATGGTGAATCTTCCAGCTCCCATGGGAGAAGTAATAGCTTCTCATCAACCAATTCAGAAAGCCTGCAACTCTGCACAGAAGGGCTTGGGTATGAAAGCTTAGATGATGGTGAGGATTTGGAAGGGGGGATGGATGAACAGGAATGGCAGAGGGAGGAAGAAGAGGAAGAGACCTTAAAGAAACAGATTCAGGATCCTATTTGGAATCCTGGGATGATTAAGAGGACAAAATCTGCTAATGTTGATGATTTTCCTCCTCCAATTTCTTGTATGGGGAACAGTGGGAAGCCTTGGGTTGGATTCAAATCCTATAGATATGGTGGAAGGTTCATATTGAAGGAAATAAGAGTCCCTACCCATGAATTTCTACATGCTTCCCGCGAAAATGGACGCCTGAAACTGCATATTCTCGTTCCTAATAAGCAAACCAGAGAGGCCAAGGAAGAAGACGACGACAACAAACAACAACAACAACAACAACACGAAGAATAA

mRNA sequence

ATGGCTGCCTGTGGAAGCCTGCAACACATCTTCGAAACCCCATTACCGGAGAATCCAACCCTTCTCGACACACTCTCGTCATGGAGCCAGATTATATCTGTGACGCCATCACAACAGCAATCGTCGTTTACAGAGATTTTTGGAGAGCTTCATTTCAAAGAGAGTTTTGTTCCTCCTTTGTCACCTCAGTTGTCTTTGACAGAATCGAACTCTCCGTCTCCTGCTGCTGCCACCGTTGATATCATCCCATGGAAAGAACCGTCGTCAAATGGTGAATCTTCCAGCTCCCATGGGAGAAGTAATAGCTTCTCATCAACCAATTCAGAAAGCCTGCAACTCTGCACAGAAGGGCTTGGGTATGAAAGCTTAGATGATGGTGAGGATTTGGAAGGGGGGATGGATGAACAGGAATGGCAGAGGGAGGAAGAAGAGGAAGAGACCTTAAAGAAACAGATTCAGGATCCTATTTGGAATCCTGGGATGATTAAGAGGACAAAATCTGCTAATGTTGATGATTTTCCTCCTCCAATTTCTTGTATGGGGAACAGTGGGAAGCCTTGGGTTGGATTCAAATCCTATAGATATGGTGGAAGGTTCATATTGAAGGAAATAAGAGTCCCTACCCATGAATTTCTACATGCTTCCCGCGAAAATGGACGCCTGAAACTGCATATTCTCGTTCCTAATAAGCAAACCAGAGAGGCCAAGGAAGAAGACGACGACAACAAACAACAACAACAACAACAACACGAAGAATAA

Coding sequence (CDS)

ATGGCTGCCTGTGGAAGCCTGCAACACATCTTCGAAACCCCATTACCGGAGAATCCAACCCTTCTCGACACACTCTCGTCATGGAGCCAGATTATATCTGTGACGCCATCACAACAGCAATCGTCGTTTACAGAGATTTTTGGAGAGCTTCATTTCAAAGAGAGTTTTGTTCCTCCTTTGTCACCTCAGTTGTCTTTGACAGAATCGAACTCTCCGTCTCCTGCTGCTGCCACCGTTGATATCATCCCATGGAAAGAACCGTCGTCAAATGGTGAATCTTCCAGCTCCCATGGGAGAAGTAATAGCTTCTCATCAACCAATTCAGAAAGCCTGCAACTCTGCACAGAAGGGCTTGGGTATGAAAGCTTAGATGATGGTGAGGATTTGGAAGGGGGGATGGATGAACAGGAATGGCAGAGGGAGGAAGAAGAGGAAGAGACCTTAAAGAAACAGATTCAGGATCCTATTTGGAATCCTGGGATGATTAAGAGGACAAAATCTGCTAATGTTGATGATTTTCCTCCTCCAATTTCTTGTATGGGGAACAGTGGGAAGCCTTGGGTTGGATTCAAATCCTATAGATATGGTGGAAGGTTCATATTGAAGGAAATAAGAGTCCCTACCCATGAATTTCTACATGCTTCCCGCGAAAATGGACGCCTGAAACTGCATATTCTCGTTCCTAATAAGCAAACCAGAGAGGCCAAGGAAGAAGACGACGACAACAAACAACAACAACAACAACAACACGAAGAATAA

Protein sequence

MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVPPLSPQLSLTESNSPSPAAATVDIIPWKEPSSNGESSSSHGRSNSFSSTNSESLQLCTEGLGYESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSANVDDFPPPISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEEDDDNKQQQQQQHEE
Homology
[Close]
BLAST of CmaCh18G006510 vs. TrEMBL
Match: A0A0A0LVU3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G166760 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 6.6e-90
Identity = 185/246 (75.20%), Postives = 204/246 (82.93%), Query Frame = 1 

Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVPPL 60
           MAACGSLQHIFE PLPEN TL + LSSW+QI+ + P++  SSFTEIFGELHFKESFVP  
Sbjct: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEP-SSFTEIFGELHFKESFVPHS 60

Query: 61  SPQLSLTESNSPSPAAATVDIIPWKEPSSNGES--SSSHGRSNSFSSTNSESLQLCTEGL 120
              LS    +S SP+A  VD I WKEPSSNGE   SS H +SNSFSSTNSESLQLCTEGL
Sbjct: 61  FSSLSSLTESSNSPSA--VDDI-WKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGL 120

Query: 121 GYESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSANVDDFPPPIS 180
           GYESLDD EDL+G MDE+EWQ E+EEE TLKKQI  P   PGMI RTK AN++DFPPPIS
Sbjct: 121 GYESLDDVEDLKGVMDEKEWQ-EDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPIS 180

Query: 181 CMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEE 240
           CMG SGKPWVGFKSYRYGGRFILKE+RVPTHEFLHASRENGRLKLHILVPN+QTRE ++E
Sbjct: 181 CMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDE 240

Query: 241 DDDNKQ 245
            DDN +
Sbjct: 241 ADDNNK 241

[Close]
BLAST of CmaCh18G006510 vs. TrEMBL
Match: B9SCV3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1281760 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 7.2e-52
Identity = 129/279 (46.24%), Postives = 172/279 (61.65%), Query Frame = 1 

Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKE-SFVPP 60
           MAACGSLQHIFE PLPE PTLL++LSSW+ I ++ P  +QSSFTEIFGELHFKE S    
Sbjct: 1   MAACGSLQHIFEKPLPETPTLLESLSSWNPIKTIKPI-EQSSFTEIFGELHFKENSESSS 60

Query: 61  LSPQLSLTESNSPSPAAATVDIIPWKEPSS---------------------------NGE 120
            SP   +   +S SP+++ + +IP  E S+                           N +
Sbjct: 61  SSPSFPIPSFSSSSPSSSFIGLIPEAETSNLNRNDSFDSGCHTKKSTSLDSLLSTPKNYQ 120

Query: 121 SSSSHGRSNSFSSTNSESLQLCTEGLGYESLDDGEDLEGGMDEQEWQREEEEEETLKKQI 180
            +  H   +SFS  N ESLQLCTEGLG+ES DD EDL+  M+E    +EE+   T    +
Sbjct: 121 YAGCHRNGDSFSPRNYESLQLCTEGLGFESFDDVEDLKNDMNENRQHQEEKAGITRHSVL 180

Query: 181 QDPIWNPGMIKRTKSANVDDFPPPISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFL 240
           +      G I+R++   +  FPPPISC+G SGKPWV FKSYR+ GRF+LK++R+P+ EFL
Sbjct: 181 ES---QAGEIRRSR-LRIGAFPPPISCIGKSGKPWVSFKSYRHDGRFVLKQVRIPSQEFL 240

Query: 241 HASRENGRLKLHILVPNKQTREAKEEDDDNKQQQQQQHE 252
           HA RE+GRLKLH + PN    E +E +++N  +  +Q E
Sbjct: 241 HAHREDGRLKLHFVQPNDGIHEEEEGEEENFTEDDEQEE 274

[Close]
BLAST of CmaCh18G006510 vs. TrEMBL
Match: F6HHF4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00570 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.1e-50
Identity = 134/279 (48.03%), Postives = 169/279 (60.57%), Query Frame = 1 

Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKE------ 60
           MAACGSLQHIFE PLPENPTL+DTLSSW+QI S+ P +Q S FTEIFGELHFKE      
Sbjct: 1   MAACGSLQHIFEKPLPENPTLMDTLSSWNQIKSMKPPEQPS-FTEIFGELHFKENSELLS 60

Query: 61  --SFVPPLSPQLSLTESN--SPSPAAATVDIIP---------WKEPSSNGESS-----SS 120
             S++    P  S + S+  S S  ++ +D  P         W E     +       S 
Sbjct: 61  SSSYLSSPHPPTSSSSSSLSSTSSTSSLIDFNPQLRIEKNENWGEKGEENKGPLNPYVSR 120

Query: 121 HGRSNSFSSTNSESLQLCTEGLGYESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPI 180
           H  S+SFSS  SESLQLCTEGLG+ES DD ED+   + + +W  E +EE   +   ++  
Sbjct: 121 HRNSDSFSSMKSESLQLCTEGLGFESCDDVEDVHNEI-KDDW--ENQEERVTRHSPRENA 180

Query: 181 WNPGMIKRTKSANVDDFPPPISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASR 240
           +      RT+      FPPPISC+G SGKPWV FKSYR+ GRF+LKEIR+P  E LHA R
Sbjct: 181 YTEFRRSRTQGG---AFPPPISCIGKSGKPWVSFKSYRHDGRFVLKEIRIPNQELLHACR 240

Query: 241 ENGRLKLHILVPNKQTREAKE---EDDDNKQQQQQQHEE 253
           E+GRLKLH + P++   E +E   ED DN+ +     EE
Sbjct: 241 EDGRLKLHFVQPDEILEEDEEQDVEDTDNEDEYDDNDEE 272

[Close]
BLAST of CmaCh18G006510 vs. TrEMBL
Match: W9R5C2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022326 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.1e-49
Identity = 131/265 (49.43%), Postives = 171/265 (64.53%), Query Frame = 1 

Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVT-PSQ-QQSSFTEIFGELHFKESFVP 60
           MAACGSLQHIFE PLPENPTLL++LS W+QI  V  PS  +QSSFTEIFGELHFKE+ + 
Sbjct: 1   MAACGSLQHIFENPLPENPTLLESLSPWNQIKPVKKPSNIEQSSFTEIFGELHFKENSLF 60

Query: 61  PLSPQLSLTESNSPSPAAATVDII----------------PWKEPSSNGESSSSHGRSNS 120
             S   S   S+S S +   +D+                 P +   S+ + +SSH  S+S
Sbjct: 61  LSSSSSSAPVSSSSSSSLVDLDLKSKFENRYDEEKKIITPPLEYSFSSSKYNSSHKNSDS 120

Query: 121 FSSTNSESLQLCTEGLGYESLD-DGEDLEGGMDEQEWQREEEEEETLKKQ---IQDPIWN 180
           FS  NSESLQLCTEGLG+ES D + EDL    + ++WQ+ + E+ ++ K    ++  +  
Sbjct: 121 FSLRNSESLQLCTEGLGFESSDYEVEDLT--KEARDWQKPDLEKPSVHKSENNLRQGLIV 180

Query: 181 PGMIKRTKSA---NVDDFPPPISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHAS 240
              +KR+++A       FPPPISC+  SGKPWV FKSYR  GRF+LKEIRV + EFLHA 
Sbjct: 181 GETVKRSRTAAGGGKGGFPPPISCLSKSGKPWVCFKSYRQDGRFVLKEIRVRSQEFLHAC 240

[Close]
BLAST of CmaCh18G006510 vs. TrEMBL
Match: A0A067KDV5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12692 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 5.7e-49
Identity = 127/278 (45.68%), Postives = 176/278 (63.31%), Query Frame = 1 

Query: 1   MAACGSLQHIFETPLPENP-TLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVPP 60
           MAACGSLQHIFE PL + P TLL++LSSW+QI  V P +Q SSFTEIFGELHF+E+    
Sbjct: 1   MAACGSLQHIFEKPLSQTPATLLESLSSWNQIKPVKPIEQ-SSFTEIFGELHFEENSQST 60

Query: 61  LSPQLSLTESNSPSPAAATVDIIPWKEPSS---------------------------NGE 120
            SP  S   S+  S +++ +DIIP   PS+                           N +
Sbjct: 61  SSPP-SFPVSSFSSASSSFIDIIPRAAPSNINKNDNIDNQNDNKKIPSLDFFSATPKNHQ 120

Query: 121 SSSSHGRSNSFSSTNSESLQLCTEGLGYESLDDGEDLEGGMDEQEWQREEEEEETLKKQI 180
            +  H   +SFS  N E+LQLCTEGLG+ESLDD EDL+  ++E +WQ +E++    +   
Sbjct: 121 YTGFHKNGDSFSPRNYENLQLCTEGLGFESLDDVEDLKNDINE-DWQHQEDKVSFTRHSA 180

Query: 181 QDPIWNPGMIKRTKSANVDDFPPPISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFL 240
            +     G I+R++S+    FPPPISC+G SGKPWV FKSYR+ GRF+LK+I  P+ EFL
Sbjct: 181 LEN--QSGEIRRSRSSG-RAFPPPISCIGKSGKPWVSFKSYRHDGRFVLKQILTPSQEFL 240

Query: 241 HASRENGRLKLHILVPNKQTREAKEEDDDNKQQQQQQH 251
           HA RENGRLKLH++ P  +  E ++ED++  +++ +++
Sbjct: 241 HAHRENGRLKLHLVQPRDEILEEEDEDEEVVEEENEEN 272

[Close]
BLAST of CmaCh18G006510 vs. TAIR10
Match: AT5G22390.1 (AT5G22390.1 Protein of unknown function (DUF3049))

HSP 1 Score: 67.0 bits (162), Expect = 1.9e-11
Identity = 75/253 (29.64%), Postives = 113/253 (44.66%), Query Frame = 1 

Query: 1   MAACGSLQHIFETPLPENP--TLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVP 60
           MAA GS   IF+ P  +N   + LDTLSS S                          + P
Sbjct: 1   MAAYGSFHRIFDNPRQDNSPKSFLDTLSSSSP-------------------------WNP 60

Query: 61  PLSPQLSLTESNSPSPAAATVDIIPWKEPSSNGESSSSHGRSNSFSSTNSESLQLCTEGL 120
                ++     +P P       + ++E        SSH      S+ NS SLQLCTEGL
Sbjct: 61  SKGLHVTTHHDETPPPFTEIFGELHFRE--------SSHSSYEKTSAENS-SLQLCTEGL 120

Query: 121 GYES---LDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSANVDDFPP 180
           G ES   L+D E + G  D  + + E + ++      ++  W P   +R       ++PP
Sbjct: 121 GSESYYGLED-EKVNGDGDGDDDEIEVKGKDNGSNDEEE--WEPRRKERK------EYPP 180

Query: 181 PISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREA 240
            ++ M         FK+YR  GR +L+E+R+P  EFL ASRE+GRL+L ++ P     E 
Sbjct: 181 AMTRMS--------FKTYRKEGRLVLEEVRIPRREFLRASREDGRLRLKLVQPEDDHDEE 202

Query: 241 KEEDDDNKQQQQQ 249
           +E + D    + +
Sbjct: 241 EENEKDKHVDEDE 202

[Close]
BLAST of CmaCh18G006510 vs. NCBI nr
Match: gi|659071648|ref|XP_008461212.1| (PREDICTED: protein FANTASTIC FOUR 4-like [Cucumis melo])

HSP 1 Score: 345.5 bits (885), Expect = 7.8e-92
Identity = 185/247 (74.90%), Postives = 207/247 (83.81%), Query Frame = 1 

Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVP-P 60
           MAACGSLQHIFE PLPENPTLL+ LSSW+QI+ + P++  SSFTEIFGELHFKESFVP  
Sbjct: 1   MAACGSLQHIFENPLPENPTLLEHLSSWNQIMPLKPTEP-SSFTEIFGELHFKESFVPHS 60

Query: 61  LSPQLSLTESNSPSPAAATVDIIPWKEPSSNGESSSS--HGRSNSFSSTNSESLQLCTEG 120
            S   SLTES++ + AA  +    WKEP SNGE   S  H +SNSFSSTNSESLQLCTEG
Sbjct: 61  FSSLSSLTESSNSTSAADDL----WKEPLSNGEREPSNFHRKSNSFSSTNSESLQLCTEG 120

Query: 121 LGYESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSANVDDFPPPI 180
           LGYESLDD EDL+G MDE+EW +E+EEE TLKKQIQ P   PGMI RTKSAN++DFPPPI
Sbjct: 121 LGYESLDDVEDLKGVMDEKEWPKEDEEERTLKKQIQYPNLKPGMINRTKSANMEDFPPPI 180

Query: 181 SCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKE 240
           SCMG SGKPWVGFKSYRYGGRFILKE+RVPTHEFLHASRENGRLKLHILVPN+QTRE ++
Sbjct: 181 SCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGED 240

Query: 241 EDDDNKQ 245
           E DDN +
Sbjct: 241 EADDNHE 242

[Close]
BLAST of CmaCh18G006510 vs. NCBI nr
Match: gi|449443640|ref|XP_004139585.1| (PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus])

HSP 1 Score: 338.6 bits (867), Expect = 9.5e-90
Identity = 185/246 (75.20%), Postives = 204/246 (82.93%), Query Frame = 1 

Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVPPL 60
           MAACGSLQHIFE PLPEN TL + LSSW+QI+ + P++  SSFTEIFGELHFKESFVP  
Sbjct: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEP-SSFTEIFGELHFKESFVPHS 60

Query: 61  SPQLSLTESNSPSPAAATVDIIPWKEPSSNGES--SSSHGRSNSFSSTNSESLQLCTEGL 120
              LS    +S SP+A  VD I WKEPSSNGE   SS H +SNSFSSTNSESLQLCTEGL
Sbjct: 61  FSSLSSLTESSNSPSA--VDDI-WKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGL 120

Query: 121 GYESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSANVDDFPPPIS 180
           GYESLDD EDL+G MDE+EWQ E+EEE TLKKQI  P   PGMI RTK AN++DFPPPIS
Sbjct: 121 GYESLDDVEDLKGVMDEKEWQ-EDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPIS 180

Query: 181 CMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEE 240
           CMG SGKPWVGFKSYRYGGRFILKE+RVPTHEFLHASRENGRLKLHILVPN+QTRE ++E
Sbjct: 181 CMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDE 240

Query: 241 DDDNKQ 245
            DDN +
Sbjct: 241 ADDNNK 241

[Close]
BLAST of CmaCh18G006510 vs. NCBI nr
Match: gi|255565665|ref|XP_002523822.1| (PREDICTED: protein FAF-like, chloroplastic [Ricinus communis])

HSP 1 Score: 212.2 bits (539), Expect = 1.0e-51
Identity = 129/279 (46.24%), Postives = 172/279 (61.65%), Query Frame = 1 

Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKE-SFVPP 60
           MAACGSLQHIFE PLPE PTLL++LSSW+ I ++ P  +QSSFTEIFGELHFKE S    
Sbjct: 1   MAACGSLQHIFEKPLPETPTLLESLSSWNPIKTIKPI-EQSSFTEIFGELHFKENSESSS 60

Query: 61  LSPQLSLTESNSPSPAAATVDIIPWKEPSS---------------------------NGE 120
            SP   +   +S SP+++ + +IP  E S+                           N +
Sbjct: 61  SSPSFPIPSFSSSSPSSSFIGLIPEAETSNLNRNDSFDSGCHTKKSTSLDSLLSTPKNYQ 120

Query: 121 SSSSHGRSNSFSSTNSESLQLCTEGLGYESLDDGEDLEGGMDEQEWQREEEEEETLKKQI 180
            +  H   +SFS  N ESLQLCTEGLG+ES DD EDL+  M+E    +EE+   T    +
Sbjct: 121 YAGCHRNGDSFSPRNYESLQLCTEGLGFESFDDVEDLKNDMNENRQHQEEKAGITRHSVL 180

Query: 181 QDPIWNPGMIKRTKSANVDDFPPPISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFL 240
           +      G I+R++   +  FPPPISC+G SGKPWV FKSYR+ GRF+LK++R+P+ EFL
Sbjct: 181 ES---QAGEIRRSR-LRIGAFPPPISCIGKSGKPWVSFKSYRHDGRFVLKQVRIPSQEFL 240

Query: 241 HASRENGRLKLHILVPNKQTREAKEEDDDNKQQQQQQHE 252
           HA RE+GRLKLH + PN    E +E +++N  +  +Q E
Sbjct: 241 HAHREDGRLKLHFVQPNDGIHEEEEGEEENFTEDDEQEE 274

[Close]
BLAST of CmaCh18G006510 vs. NCBI nr
Match: gi|731394549|ref|XP_010651876.1| (PREDICTED: suppressor protein SRP40 [Vitis vinifera])

HSP 1 Score: 206.1 bits (523), Expect = 7.4e-50
Identity = 134/279 (48.03%), Postives = 169/279 (60.57%), Query Frame = 1 

Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKE------ 60
           MAACGSLQHIFE PLPENPTL+DTLSSW+QI S+ P +Q S FTEIFGELHFKE      
Sbjct: 1   MAACGSLQHIFEKPLPENPTLMDTLSSWNQIKSMKPPEQPS-FTEIFGELHFKENSELLS 60

Query: 61  --SFVPPLSPQLSLTESN--SPSPAAATVDIIP---------WKEPSSNGESS-----SS 120
             S++    P  S + S+  S S  ++ +D  P         W E     +       S 
Sbjct: 61  SSSYLSSPHPPTSSSSSSLSSTSSTSSLIDFNPQLRIEKNENWGEKGEENKGPLNPYVSR 120

Query: 121 HGRSNSFSSTNSESLQLCTEGLGYESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPI 180
           H  S+SFSS  SESLQLCTEGLG+ES DD ED+   + + +W  E +EE   +   ++  
Sbjct: 121 HRNSDSFSSMKSESLQLCTEGLGFESCDDVEDVHNEI-KDDW--ENQEERVTRHSPRENA 180

Query: 181 WNPGMIKRTKSANVDDFPPPISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASR 240
           +      RT+      FPPPISC+G SGKPWV FKSYR+ GRF+LKEIR+P  E LHA R
Sbjct: 181 YTEFRRSRTQGG---AFPPPISCIGKSGKPWVSFKSYRHDGRFVLKEIRIPNQELLHACR 240

Query: 241 ENGRLKLHILVPNKQTREAKE---EDDDNKQQQQQQHEE 253
           E+GRLKLH + P++   E +E   ED DN+ +     EE
Sbjct: 241 EDGRLKLHFVQPDEILEEDEEQDVEDTDNEDEYDDNDEE 272

[Close]
BLAST of CmaCh18G006510 vs. NCBI nr
Match: gi|703074408|ref|XP_010089810.1| (hypothetical protein L484_022326 [Morus notabilis])

HSP 1 Score: 204.9 bits (520), Expect = 1.6e-49
Identity = 131/265 (49.43%), Postives = 171/265 (64.53%), Query Frame = 1 

Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVT-PSQ-QQSSFTEIFGELHFKESFVP 60
           MAACGSLQHIFE PLPENPTLL++LS W+QI  V  PS  +QSSFTEIFGELHFKE+ + 
Sbjct: 1   MAACGSLQHIFENPLPENPTLLESLSPWNQIKPVKKPSNIEQSSFTEIFGELHFKENSLF 60

Query: 61  PLSPQLSLTESNSPSPAAATVDII----------------PWKEPSSNGESSSSHGRSNS 120
             S   S   S+S S +   +D+                 P +   S+ + +SSH  S+S
Sbjct: 61  LSSSSSSAPVSSSSSSSLVDLDLKSKFENRYDEEKKIITPPLEYSFSSSKYNSSHKNSDS 120

Query: 121 FSSTNSESLQLCTEGLGYESLD-DGEDLEGGMDEQEWQREEEEEETLKKQ---IQDPIWN 180
           FS  NSESLQLCTEGLG+ES D + EDL    + ++WQ+ + E+ ++ K    ++  +  
Sbjct: 121 FSLRNSESLQLCTEGLGFESSDYEVEDLT--KEARDWQKPDLEKPSVHKSENNLRQGLIV 180

Query: 181 PGMIKRTKSA---NVDDFPPPISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHAS 240
              +KR+++A       FPPPISC+  SGKPWV FKSYR  GRF+LKEIRV + EFLHA 
Sbjct: 181 GETVKRSRTAAGGGKGGFPPPISCLSKSGKPWVCFKSYRQDGRFVLKEIRVRSQEFLHAC 240

The following BLAST results are available for this feature:
BLAST of CmaCh18G006510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh18G006510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVU3_CUCSA6.6e-9075.20Uncharacterized protein OS=Cucumis sativus GN=Csa_1G166760 PE=4 SV=1[more]
B9SCV3_RICCO7.2e-5246.24Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1281760 PE=4 SV=1[more]
F6HHF4_VITVI5.1e-5048.03Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00570 PE=4 SV=... [more]
W9R5C2_9ROSA1.1e-4949.43Uncharacterized protein OS=Morus notabilis GN=L484_022326 PE=4 SV=1[more]
A0A067KDV5_JATCU5.7e-4945.68Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12692 PE=4 SV=1[more]
BLAST of CmaCh18G006510 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G22390.11.9e-1129.64 Protein of unknown function (DUF3049)[more]
BLAST of CmaCh18G006510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659071648|ref|XP_008461212.1|7.8e-9274.90PREDICTED: protein FANTASTIC FOUR 4-like [Cucumis melo][more]
gi|449443640|ref|XP_004139585.1|9.5e-9075.20PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus][more]
gi|255565665|ref|XP_002523822.1|1.0e-5146.24PREDICTED: protein FAF-like, chloroplastic [Ricinus communis][more]
gi|731394549|ref|XP_010651876.1|7.4e-5048.03PREDICTED: suppressor protein SRP40 [Vitis vinifera][more]
gi|703074408|ref|XP_010089810.1|1.6e-4949.43hypothetical protein L484_022326 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021410FAF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G006510.1CmaCh18G006510.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021410The fantastic four familyPFAMPF11250FAFcoord: 173..224
score: 6.1
NoneNo IPR availableunknownCoilCoilcoord: 229..249
scor
NoneNo IPR availablePANTHERPTHR33155FAMILY NOT NAMEDcoord: 1..252
score: 1.4
NoneNo IPR availablePANTHERPTHR33155:SF9SUBFAMILY NOT NAMEDcoord: 1..252
score: 1.4