Cp4.1LG09g05510 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG09g05510
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Protein FAF-like, chloroplastic
Location	Cp4.1LG09 : 4659193 .. 4659972 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCTGTGGAAGCCTGCAACACATCTTCGAAACCCCATTACCGGAGAATCCAACCCTTCTCGACACACTCTCGTCATGGAGCCAGATTATAGCTGTGACGCCATCCGAGCAGCAATCGTCGTTTACAGAGATTTTTGGAGAGCTTCATTTCAAGGAGAGTTTTGTTCCTCCTTTGTCACCTCAGTTGTCTTTGACAGAATCGAACTCTCCGTCTCCTGCTGCTGCCGCCGTTGATATCGAACCGTCGTCAAATGGTGAATCTTCCAGTTCCCATGGGAGAAGTAATAGCTTCTCATCGACCAATTCAGAAAGCCTGCAACTCTGCACAGAAGGGCTTGGGTATGAAAGCTTAGATGATGGTGAGGATTTGAAAGGGGGGATGGATGAAGAGGAATGGCAGAGGGAGGAAGAAGAGGAAGAGACCTTAAAGAAACAGATTGAGAATCCTATTTGGAAGCCTGGGATGATTAAGAGGACAAAATCTGCTAATGTTGATGATTTTCCTCCTCCAATTTCTTGTATGGGGAACAGTGGGAAGCCTTGGGTTGGATTCAAATCCTATAGATATGGTGGAAGGTTTATATTGAAGGAAATAAGAGTCCCTACCCATGAATTTCTACATGCTTCCCGCGAAAATGGACGCCTGAAACTGCATATTCTCGTTCCTAATAAGCAAACCAGAGAGGCCAAGGAAGAAGACGATGACAAACAACAAGAACAACAGCAAGAACACGACAAACAACAAGAACAACAACAAGAACAACACGAGGAATAA

mRNA sequence

ATGGCTGCCTGTGGAAGCCTGCAACACATCTTCGAAACCCCATTACCGGAGAATCCAACCCTTCTCGACACACTCTCGTCATGGAGCCAGATTATAGCTGTGACGCCATCCGAGCAGCAATCGTCGTTTACAGAGATTTTTGGAGAGCTTCATTTCAAGGAGAGTTTTGTTCCTCCTTTGTCACCTCAGTTGTCTTTGACAGAATCGAACTCTCCGTCTCCTGCTGCTGCCGCCGTTGATATCGAACCGTCGTCAAATGGTGAATCTTCCAGTTCCCATGGGAGAAGTAATAGCTTCTCATCGACCAATTCAGAAAGCCTGCAACTCTGCACAGAAGGGCTTGGGTATGAAAGCTTAGATGATGGTGAGGATTTGAAAGGGGGGATGGATGAAGAGGAATGGCAGAGGGAGGAAGAAGAGGAAGAGACCTTAAAGAAACAGATTGAGAATCCTATTTGGAAGCCTGGGATGATTAAGAGGACAAAATCTGCTAATGTTGATGATTTTCCTCCTCCAATTTCTTGTATGGGGAACAGTGGGAAGCCTTGGGTTGGATTCAAATCCTATAGATATGGTGGAAGGTTTATATTGAAGGAAATAAGAGTCCCTACCCATGAATTTCTACATGCTTCCCGCGAAAATGGACGCCTGAAACTGCATATTCTCGTTCCTAATAAGCAAACCAGAGAGGCCAAGGAAGAAGACGATGACAAACAACAAGAACAACAGCAAGAACACGACAAACAACAAGAACAACAACAAGAACAACACGAGGAATAA

Coding sequence (CDS)

ATGGCTGCCTGTGGAAGCCTGCAACACATCTTCGAAACCCCATTACCGGAGAATCCAACCCTTCTCGACACACTCTCGTCATGGAGCCAGATTATAGCTGTGACGCCATCCGAGCAGCAATCGTCGTTTACAGAGATTTTTGGAGAGCTTCATTTCAAGGAGAGTTTTGTTCCTCCTTTGTCACCTCAGTTGTCTTTGACAGAATCGAACTCTCCGTCTCCTGCTGCTGCCGCCGTTGATATCGAACCGTCGTCAAATGGTGAATCTTCCAGTTCCCATGGGAGAAGTAATAGCTTCTCATCGACCAATTCAGAAAGCCTGCAACTCTGCACAGAAGGGCTTGGGTATGAAAGCTTAGATGATGGTGAGGATTTGAAAGGGGGGATGGATGAAGAGGAATGGCAGAGGGAGGAAGAAGAGGAAGAGACCTTAAAGAAACAGATTGAGAATCCTATTTGGAAGCCTGGGATGATTAAGAGGACAAAATCTGCTAATGTTGATGATTTTCCTCCTCCAATTTCTTGTATGGGGAACAGTGGGAAGCCTTGGGTTGGATTCAAATCCTATAGATATGGTGGAAGGTTTATATTGAAGGAAATAAGAGTCCCTACCCATGAATTTCTACATGCTTCCCGCGAAAATGGACGCCTGAAACTGCATATTCTCGTTCCTAATAAGCAAACCAGAGAGGCCAAGGAAGAAGACGATGACAAACAACAAGAACAACAGCAAGAACACGACAAACAACAAGAACAACAACAAGAACAACACGAGGAATAA

Protein sequence

MAACGSLQHIFETPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKESFVPPLSPQLSLTESNSPSPAAAAVDIEPSSNGESSSSHGRSNSFSSTNSESLQLCTEGLGYESLDDGEDLKGGMDEEEWQREEEEEETLKKQIENPIWKPGMIKRTKSANVDDFPPPISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEEDDDKQQEQQQEHDKQQEQQQEQHEE

Homology

[Close]

BLAST of Cp4.1LG09g05510 vs. TrEMBL
Match: A0A0A0LVU3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G166760 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 8.3e-88
Identity = 183/243 (75.31%), Postives = 201/243 (82.72%), Query Frame = 1


Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKESFVP-P 60
           MAACGSLQHIFE PLPEN TL + LSSW+QI+ + P+E  SSFTEIFGELHFKESFVP  
Sbjct: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEP-SSFTEIFGELHFKESFVPHS 60

Query: 61  LSPQLSLTESNSPSPAAAAVDIEPSSNGES--SSSHGRSNSFSSTNSESLQLCTEGLGYE 120
            S   SLTES++   A   +  EPSSNGE   SS H +SNSFSSTNSESLQLCTEGLGYE
Sbjct: 61  FSSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYE 120

Query: 121 SLDDGEDLKGGMDEEEWQREEEEEETLKKQIENPIWKPGMIKRTKSANVDDFPPPISCMG 180
           SLDD EDLKG MDE+EWQ E+EEE TLKKQI  P  KPGMI RTK AN++DFPPPISCMG
Sbjct: 121 SLDDVEDLKGVMDEKEWQ-EDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMG 180

Query: 181 NSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEEDDD 240
            SGKPWVGFKSYRYGGRFILKE+RVPTHEFLHASRENGRLKLHILVPN+QTRE ++E DD
Sbjct: 181 KSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADD 240

[Close]

BLAST of Cp4.1LG09g05510 vs. TrEMBL
Match: B9SCV3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1281760 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 6.4e-48
Identity = 133/292 (45.55%), Postives = 177/292 (60.62%), Query Frame = 1


Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKE-SFVPP 60
           MAACGSLQHIFE PLPE PTLL++LSSW+ I  + P E QSSFTEIFGELHFKE S    
Sbjct: 1   MAACGSLQHIFEKPLPETPTLLESLSSWNPIKTIKPIE-QSSFTEIFGELHFKENSESSS 60

Query: 61  LSPQLSLTESNSPSPAAAAVDIEPSS-------------------------------NGE 120
            SP   +   +S SP+++ + + P +                               N +
Sbjct: 61  SSPSFPIPSFSSSSPSSSFIGLIPEAETSNLNRNDSFDSGCHTKKSTSLDSLLSTPKNYQ 120

Query: 121 SSSSHGRSNSFSSTNSESLQLCTEGLGYESLDDGEDLKGGMDEEEWQREEEEEETLKKQI 180
            +  H   +SFS  N ESLQLCTEGLG+ES DD EDLK  M+E    +EE+   T    +
Sbjct: 121 YAGCHRNGDSFSPRNYESLQLCTEGLGFESFDDVEDLKNDMNENRQHQEEKAGITRHSVL 180

Query: 181 ENPIWKPGMIKRTKSANVDDFPPPISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFL 240
           E+   + G I+R++   +  FPPPISC+G SGKPWV FKSYR+ GRF+LK++R+P+ EFL
Sbjct: 181 ES---QAGEIRRSR-LRIGAFPPPISCIGKSGKPWVSFKSYRHDGRFVLKQVRIPSQEFL 240

Query: 241 HASRENGRLKLHILVPN---KQTREAKEEDDDKQQEQQQEHDKQQEQQQEQH 258
           HA RE+GRLKLH + PN    +  E +EE+  +  EQ++  +   ++ QEQH
Sbjct: 241 HAHREDGRLKLHFVQPNDGIHEEEEGEEENFTEDDEQEENEEIGNKEVQEQH 287

[Close]

BLAST of Cp4.1LG09g05510 vs. TrEMBL
Match: F6HHF4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00570 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.7e-46
Identity = 134/288 (46.53%), Postives = 179/288 (62.15%), Query Frame = 1


Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKE------ 60
           MAACGSLQHIFE PLPENPTL+DTLSSW+QI ++ P EQ S FTEIFGELHFKE      
Sbjct: 1   MAACGSLQHIFEKPLPENPTLMDTLSSWNQIKSMKPPEQPS-FTEIFGELHFKENSELLS 60

Query: 61  --SFVPPLSPQLSLTESN--SPSPAAAAVDIEPS----------SNGESS--------SS 120
             S++    P  S + S+  S S  ++ +D  P             GE +        S 
Sbjct: 61  SSSYLSSPHPPTSSSSSSLSSTSSTSSLIDFNPQLRIEKNENWGEKGEENKGPLNPYVSR 120

Query: 121 HGRSNSFSSTNSESLQLCTEGLGYESLDDGEDLKGGMDEEEWQREEEEEETLKKQIENPI 180
           H  S+SFSS  SESLQLCTEGLG+ES DD ED+   + +++W+ +EE   T     EN  
Sbjct: 121 HRNSDSFSSMKSESLQLCTEGLGFESCDDVEDVHNEI-KDDWENQEERV-TRHSPRENAY 180

Query: 181 WKPGMIKRTKSANVDDFPPPISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASR 240
            +    +R+++     FPPPISC+G SGKPWV FKSYR+ GRF+LKEIR+P  E LHA R
Sbjct: 181 TE---FRRSRTQG-GAFPPPISCIGKSGKPWVSFKSYRHDGRFVLKEIRIPNQELLHACR 240

Query: 241 ENGRLKLHILVPNKQTREAKEED--DDKQQEQQQEHDKQQEQQQEQHE 259
           E+GRLKLH + P++   E +E+D  D   +++  ++D++   +  +HE
Sbjct: 241 EDGRLKLHFVQPDEILEEDEEQDVEDTDNEDEYDDNDEEDNDENGEHE 281

[Close]

BLAST of Cp4.1LG09g05510 vs. TrEMBL
Match: A0A061GV87_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_041386 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 7.9e-46
Identity = 133/280 (47.50%), Postives = 174/280 (62.14%), Query Frame = 1


Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKE------ 60
           MAACGSLQHIFE PLPENPTLL++LSSW+QI       + SSFTEIFGELHFKE      
Sbjct: 1   MAACGSLQHIFENPLPENPTLLESLSSWNQIKPAIKPIEPSSFTEIFGELHFKENSKSSS 60

Query: 61  -----------SFVPPLSPQLS---------LTESNSPSPAAAAVDIEPSSNG--ESSSS 120
                      + +  LSPQ S           E++  +  ++  +I PS+    + ++ 
Sbjct: 61  ASSFPISPFSSTSIIDLSPQNSAFKLSKNDTFNENDENNNRSSPPEIFPSTPEITKYTNC 120

Query: 121 HGRSNSFSSTNSESLQLCTEGLGYESLDDGEDLKGGMDEEEWQREEEEEETLKKQIENPI 180
           H +S SFS  NSESLQLCTEGLG+ES DD EDLK  M +E WQ +EE+E ++        
Sbjct: 121 HKKSESFS-WNSESLQLCTEGLGFESSDDVEDLKNEM-KEGWQSKEEKESSINTTKHTTT 180

Query: 181 WKP-GMIKRTKSANVDDFPPPISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHAS 240
               G  +R ++     FPPPISC+G SGKPWV FKSYR  GRF+LKE+R+PT EFLHA 
Sbjct: 181 ENLCGEFRRPRTRG-GAFPPPISCIGKSGKPWVCFKSYRQDGRFVLKEVRIPTQEFLHAC 240

Query: 241 RENGRLKLHILVPNKQTREAKEEDDDKQQEQQQEHDKQQE 252
           RE+GRLKLH + P  +  E  EE  ++++E++ E +  +E
Sbjct: 241 REDGRLKLHFVQPEDEILE--EEGFEEEEEEEDELEDLEE 275

[Close]

BLAST of Cp4.1LG09g05510 vs. TrEMBL
Match: A0A067KDV5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12692 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.3e-45
Identity = 134/290 (46.21%), Postives = 182/290 (62.76%), Query Frame = 1


Query: 1   MAACGSLQHIFETPLPENP-TLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKESFV-- 60
           MAACGSLQHIFE PL + P TLL++LSSW+QI  V P EQ SSFTEIFGELHF+E+    
Sbjct: 1   MAACGSLQHIFEKPLSQTPATLLESLSSWNQIKPVKPIEQ-SSFTEIFGELHFEENSQST 60

Query: 61  --PPLSPQLSLTESNSPS----PAAAAVDIEPSSNGESSSS------------------- 120
             PP  P  S + ++S      P AA  +I  + N ++ +                    
Sbjct: 61  SSPPSFPVSSFSSASSSFIDIIPRAAPSNINKNDNIDNQNDNKKIPSLDFFSATPKNHQY 120

Query: 121 ---HGRSNSFSSTNSESLQLCTEGLGYESLDDGEDLKGGMDEEEWQREEEEEE-TLKKQI 180
              H   +SFS  N E+LQLCTEGLG+ESLDD EDLK  ++E+ WQ +E++   T    +
Sbjct: 121 TGFHKNGDSFSPRNYENLQLCTEGLGFESLDDVEDLKNDINED-WQHQEDKVSFTRHSAL 180

Query: 181 ENPIWKPGMIKRTKSANVDDFPPPISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFL 240
           EN   + G I+R++S+    FPPPISC+G SGKPWV FKSYR+ GRF+LK+I  P+ EFL
Sbjct: 181 EN---QSGEIRRSRSSG-RAFPPPISCIGKSGKPWVSFKSYRHDGRFVLKQILTPSQEFL 240

Query: 241 HASRENGRLKLHILVPNKQTREAKEEDDDKQQEQQQEHDKQQEQQQEQHE 259
           HA RENGRLKLH++ P  +  E ++ED++  +E+ +E+  + ++  E  E
Sbjct: 241 HAHRENGRLKLHLVQPRDEILEEEDEDEEVVEEENEENYSEDDEGDEDEE 284

[Close]

BLAST of Cp4.1LG09g05510 vs. TAIR10
Match: AT5G22390.1 (AT5G22390.1 Protein of unknown function (DUF3049))

HSP 1 Score: 59.7 bits (143), Expect = 3.1e-09
Identity = 78/263 (29.66%), Postives = 119/263 (45.25%), Query Frame = 1


Query: 1   MAACGSLQHIFETPLPENP--TLLDTLSS---W--SQIIAVTPSEQQSS--FTEIFGELH 60
           MAA GS   IF+ P  +N   + LDTLSS   W  S+ + VT    ++   FTEIFGELH
Sbjct: 1   MAAYGSFHRIFDNPRQDNSPKSFLDTLSSSSPWNPSKGLHVTTHHDETPPPFTEIFGELH 60

Query: 61  FKESFVPPLSPQLSLTESNSPSPAAAAVDIEPSSNGESSSSHGRSNSFSSTNSESLQLCT 120
           F+ES           + S+    +A    ++  + G        S S+     E +    
Sbjct: 61  FRES-----------SHSSYEKTSAENSSLQLCTEGLG------SESYYGLEDEKVNGDG 120

Query: 121 EGLGYESLDDGEDLKGGMDEEEWQREEEEEETLKKQIENPIWKPGMIKRTKSANVDDFPP 180
           +G   E    G+D  G  DEEEW+   +E +                         ++PP
Sbjct: 121 DGDDDEIEVKGKD-NGSNDEEEWEPRRKERK-------------------------EYPP 180

Query: 181 PISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREA 240
            ++ M          K+YR  GR +L+E+R+P  EFL ASRE+GRL+L ++ P       
Sbjct: 181 AMTRMSF--------KTYRKEGRLVLEEVRIPRREFLRASREDGRLRLKLVQP------- 202

Query: 241 KEEDDDKQQEQQQEHDKQQEQQQ 255
              +DD  +E++ E DK  ++ +
Sbjct: 241 ---EDDHDEEEENEKDKHVDEDE 202

[Close]

BLAST of Cp4.1LG09g05510 vs. NCBI nr
Match: gi|659071648|ref|XP_008461212.1| (PREDICTED: protein FANTASTIC FOUR 4-like [Cucumis melo])

HSP 1 Score: 340.9 bits (873), Expect = 2.0e-90
Identity = 184/243 (75.72%), Postives = 205/243 (84.36%), Query Frame = 1


Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKESFVP-P 60
           MAACGSLQHIFE PLPENPTLL+ LSSW+QI+ + P+E  SSFTEIFGELHFKESFVP  
Sbjct: 1   MAACGSLQHIFENPLPENPTLLEHLSSWNQIMPLKPTEP-SSFTEIFGELHFKESFVPHS 60

Query: 61  LSPQLSLTESNSPSPAAAAVDIEPSSNGESSSS--HGRSNSFSSTNSESLQLCTEGLGYE 120
            S   SLTES++ + AA  +  EP SNGE   S  H +SNSFSSTNSESLQLCTEGLGYE
Sbjct: 61  FSSLSSLTESSNSTSAADDLWKEPLSNGEREPSNFHRKSNSFSSTNSESLQLCTEGLGYE 120

Query: 121 SLDDGEDLKGGMDEEEWQREEEEEETLKKQIENPIWKPGMIKRTKSANVDDFPPPISCMG 180
           SLDD EDLKG MDE+EW +E+EEE TLKKQI+ P  KPGMI RTKSAN++DFPPPISCMG
Sbjct: 121 SLDDVEDLKGVMDEKEWPKEDEEERTLKKQIQYPNLKPGMINRTKSANMEDFPPPISCMG 180

Query: 181 NSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEEDDD 240
            SGKPWVGFKSYRYGGRFILKE+RVPTHEFLHASRENGRLKLHILVPN+QTRE ++E DD
Sbjct: 181 KSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADD 240

[Close]

BLAST of Cp4.1LG09g05510 vs. NCBI nr
Match: gi|449443640|ref|XP_004139585.1| (PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus])

HSP 1 Score: 331.6 bits (849), Expect = 1.2e-87
Identity = 183/243 (75.31%), Postives = 201/243 (82.72%), Query Frame = 1


Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKESFVP-P 60
           MAACGSLQHIFE PLPEN TL + LSSW+QI+ + P+E  SSFTEIFGELHFKESFVP  
Sbjct: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEP-SSFTEIFGELHFKESFVPHS 60

Query: 61  LSPQLSLTESNSPSPAAAAVDIEPSSNGES--SSSHGRSNSFSSTNSESLQLCTEGLGYE 120
            S   SLTES++   A   +  EPSSNGE   SS H +SNSFSSTNSESLQLCTEGLGYE
Sbjct: 61  FSSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYE 120

Query: 121 SLDDGEDLKGGMDEEEWQREEEEEETLKKQIENPIWKPGMIKRTKSANVDDFPPPISCMG 180
           SLDD EDLKG MDE+EWQ E+EEE TLKKQI  P  KPGMI RTK AN++DFPPPISCMG
Sbjct: 121 SLDDVEDLKGVMDEKEWQ-EDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMG 180

Query: 181 NSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEEDDD 240
            SGKPWVGFKSYRYGGRFILKE+RVPTHEFLHASRENGRLKLHILVPN+QTRE ++E DD
Sbjct: 181 KSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADD 240

[Close]

BLAST of Cp4.1LG09g05510 vs. NCBI nr
Match: gi|255565665|ref|XP_002523822.1| (PREDICTED: protein FAF-like, chloroplastic [Ricinus communis])

HSP 1 Score: 199.1 bits (505), Expect = 9.3e-48
Identity = 133/292 (45.55%), Postives = 177/292 (60.62%), Query Frame = 1


Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKE-SFVPP 60
           MAACGSLQHIFE PLPE PTLL++LSSW+ I  + P E QSSFTEIFGELHFKE S    
Sbjct: 1   MAACGSLQHIFEKPLPETPTLLESLSSWNPIKTIKPIE-QSSFTEIFGELHFKENSESSS 60

Query: 61  LSPQLSLTESNSPSPAAAAVDIEPSS-------------------------------NGE 120
            SP   +   +S SP+++ + + P +                               N +
Sbjct: 61  SSPSFPIPSFSSSSPSSSFIGLIPEAETSNLNRNDSFDSGCHTKKSTSLDSLLSTPKNYQ 120

Query: 121 SSSSHGRSNSFSSTNSESLQLCTEGLGYESLDDGEDLKGGMDEEEWQREEEEEETLKKQI 180
            +  H   +SFS  N ESLQLCTEGLG+ES DD EDLK  M+E    +EE+   T    +
Sbjct: 121 YAGCHRNGDSFSPRNYESLQLCTEGLGFESFDDVEDLKNDMNENRQHQEEKAGITRHSVL 180

Query: 181 ENPIWKPGMIKRTKSANVDDFPPPISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFL 240
           E+   + G I+R++   +  FPPPISC+G SGKPWV FKSYR+ GRF+LK++R+P+ EFL
Sbjct: 181 ES---QAGEIRRSR-LRIGAFPPPISCIGKSGKPWVSFKSYRHDGRFVLKQVRIPSQEFL 240

Query: 241 HASRENGRLKLHILVPN---KQTREAKEEDDDKQQEQQQEHDKQQEQQQEQH 258
           HA RE+GRLKLH + PN    +  E +EE+  +  EQ++  +   ++ QEQH
Sbjct: 241 HAHREDGRLKLHFVQPNDGIHEEEEGEEENFTEDDEQEENEEIGNKEVQEQH 287

[Close]

BLAST of Cp4.1LG09g05510 vs. NCBI nr
Match: gi|731394549|ref|XP_010651876.1| (PREDICTED: suppressor protein SRP40 [Vitis vinifera])

HSP 1 Score: 193.7 bits (491), Expect = 3.9e-46
Identity = 134/288 (46.53%), Postives = 179/288 (62.15%), Query Frame = 1


Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKE------ 60
           MAACGSLQHIFE PLPENPTL+DTLSSW+QI ++ P EQ S FTEIFGELHFKE      
Sbjct: 1   MAACGSLQHIFEKPLPENPTLMDTLSSWNQIKSMKPPEQPS-FTEIFGELHFKENSELLS 60

Query: 61  --SFVPPLSPQLSLTESN--SPSPAAAAVDIEPS----------SNGESS--------SS 120
             S++    P  S + S+  S S  ++ +D  P             GE +        S 
Sbjct: 61  SSSYLSSPHPPTSSSSSSLSSTSSTSSLIDFNPQLRIEKNENWGEKGEENKGPLNPYVSR 120

Query: 121 HGRSNSFSSTNSESLQLCTEGLGYESLDDGEDLKGGMDEEEWQREEEEEETLKKQIENPI 180
           H  S+SFSS  SESLQLCTEGLG+ES DD ED+   + +++W+ +EE   T     EN  
Sbjct: 121 HRNSDSFSSMKSESLQLCTEGLGFESCDDVEDVHNEI-KDDWENQEERV-TRHSPRENAY 180

Query: 181 WKPGMIKRTKSANVDDFPPPISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASR 240
            +    +R+++     FPPPISC+G SGKPWV FKSYR+ GRF+LKEIR+P  E LHA R
Sbjct: 181 TE---FRRSRTQG-GAFPPPISCIGKSGKPWVSFKSYRHDGRFVLKEIRIPNQELLHACR 240

Query: 241 ENGRLKLHILVPNKQTREAKEED--DDKQQEQQQEHDKQQEQQQEQHE 259
           E+GRLKLH + P++   E +E+D  D   +++  ++D++   +  +HE
Sbjct: 241 EDGRLKLHFVQPDEILEEDEEQDVEDTDNEDEYDDNDEEDNDENGEHE 281

[Close]

BLAST of Cp4.1LG09g05510 vs. NCBI nr
Match: gi|590586758|ref|XP_007015792.1| (Uncharacterized protein TCM_041386 [Theobroma cacao])

HSP 1 Score: 192.2 bits (487), Expect = 1.1e-45
Identity = 133/280 (47.50%), Postives = 174/280 (62.14%), Query Frame = 1


Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKE------ 60
           MAACGSLQHIFE PLPENPTLL++LSSW+QI       + SSFTEIFGELHFKE      
Sbjct: 1   MAACGSLQHIFENPLPENPTLLESLSSWNQIKPAIKPIEPSSFTEIFGELHFKENSKSSS 60

Query: 61  -----------SFVPPLSPQLS---------LTESNSPSPAAAAVDIEPSSNG--ESSSS 120
                      + +  LSPQ S           E++  +  ++  +I PS+    + ++ 
Sbjct: 61  ASSFPISPFSSTSIIDLSPQNSAFKLSKNDTFNENDENNNRSSPPEIFPSTPEITKYTNC 120

Query: 121 HGRSNSFSSTNSESLQLCTEGLGYESLDDGEDLKGGMDEEEWQREEEEEETLKKQIENPI 180
           H +S SFS  NSESLQLCTEGLG+ES DD EDLK  M +E WQ +EE+E ++        
Sbjct: 121 HKKSESFS-WNSESLQLCTEGLGFESSDDVEDLKNEM-KEGWQSKEEKESSINTTKHTTT 180

Query: 181 WKP-GMIKRTKSANVDDFPPPISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHAS 240
               G  +R ++     FPPPISC+G SGKPWV FKSYR  GRF+LKE+R+PT EFLHA 
Sbjct: 181 ENLCGEFRRPRTRG-GAFPPPISCIGKSGKPWVCFKSYRQDGRFVLKEVRIPTQEFLHAC 240

Query: 241 RENGRLKLHILVPNKQTREAKEEDDDKQQEQQQEHDKQQE 252
           RE+GRLKLH + P  +  E  EE  ++++E++ E +  +E
Sbjct: 241 REDGRLKLHFVQPEDEILE--EEGFEEEEEEEDELEDLEE 275

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g05510 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG09g05510 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVU3_CUCSA	8.3e-88	75.31	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G166760 PE=4 SV=1	[more]
B9SCV3_RICCO	6.4e-48	45.55	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1281760 PE=4 SV=1	[more]
F6HHF4_VITVI	2.7e-46	46.53	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00570 PE=4 SV=...	[more]
A0A061GV87_THECC	7.9e-46	47.50	Uncharacterized protein OS=Theobroma cacao GN=TCM_041386 PE=4 SV=1	[more]
A0A067KDV5_JATCU	1.3e-45	46.21	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12692 PE=4 SV=1	[more]

BLAST of Cp4.1LG09g05510 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22390.1	3.1e-09	29.66	Protein of unknown function (DUF3049)	[more]

BLAST of Cp4.1LG09g05510 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659071648\|ref\|XP_008461212.1\|	2.0e-90	75.72	PREDICTED: protein FANTASTIC FOUR 4-like [Cucumis melo]	[more]
gi\|449443640\|ref\|XP_004139585.1\|	1.2e-87	75.31	PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus]	[more]
gi\|255565665\|ref\|XP_002523822.1\|	9.3e-48	45.55	PREDICTED: protein FAF-like, chloroplastic [Ricinus communis]	[more]
gi\|731394549\|ref\|XP_010651876.1\|	3.9e-46	46.53	PREDICTED: suppressor protein SRP40 [Vitis vinifera]	[more]
gi\|590586758\|ref\|XP_007015792.1\|	1.1e-45	47.50	Uncharacterized protein TCM_041386 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021410	FAF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g05510.1	Cp4.1LG09g05510.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021410	The fantastic four family	PFAM	PF11250	FAF	coord: 169..220 score: 6.4
None	No IPR available	unknown	Coil	Coil	coord: 225..259 scor
None	No IPR available	PANTHER	PTHR33155	FAMILY NOT NAMED	coord: 1..259 score: 6.9
None	No IPR available	PANTHER	PTHR33155:SF9	SUBFAMILY NOT NAMED	coord: 1..259 score: 6.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG09g05510	CmaCh18G006510	Cucurbita maxima (Rimu)	cmacpeB415
Cp4.1LG09g05510	Cla001089	Watermelon (97103) v1	cpewmB045
Cp4.1LG09g05510	Cla008637	Watermelon (97103) v1	cpewmB053
Cp4.1LG09g05510	ClCG02G022240	Watermelon (Charleston Gray)	cpewcgB034
Cp4.1LG09g05510	ClCG01G012170	Watermelon (Charleston Gray)	cpewcgB029
Cp4.1LG09g05510	Lsi03G001260	Bottle gourd (USVL1VR-Ls)	cpelsiB029
Cp4.1LG09g05510	Carg26266	Silver-seed gourd	carcpeB0000

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG09g05510	Watermelon (97103) v1	cpewmB048
Cp4.1LG09g05510	Melon (DHL92) v3.5.1	cpemeB028
Cp4.1LG09g05510	Cucumber (Gy14) v2	cgybcpeB007
Cp4.1LG09g05510	Melon (DHL92) v3.6.1	cpemedB033
Cp4.1LG09g05510	Cucumber (Chinese Long) v3	cpecucB0024
Cp4.1LG09g05510	Wax gourd	cpewgoB0050
Cp4.1LG09g05510	Cucurbita pepo (Zucchini)	cpecpeB048
Cp4.1LG09g05510	Cucumber (Gy14) v1	cgycpeB0841
Cp4.1LG09g05510	Cucurbita moschata (Rifu)	cmocpeB374
Cp4.1LG09g05510	Wild cucumber (PI 183967)	cpecpiB017
Cp4.1LG09g05510	Cucumber (Chinese Long) v2	cpecuB020