ClCG01G012170 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G012170
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
Descriptionstructural constituent of ribosome LENGTH=282
LocationCG_Chr01 : 22132560 .. 22133336 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCTGCCTGTGGAAGCCTACAACACATCTTTGAAAACCCATTACCAGAAAGTCCAACCCTTCTTGAAACTCTCTCATCATGGAACCAGATTATGCCTCTGAAGCCCACCGATCACTCGTCCTTTACAGAGATCTTTGGAGAGCTTCATTTCAAAGAGAGTTTTGTTCCTCATTCTTTCTCATCCCTGTCGTCTTTGACAGAATCGAATTCTCCATCTTCCAATGACCTGTGGAAAGAACCATCCTCAAATGGTGAACATGAATGTTCCAGCTTCCATAGAAAGAGCAATAGCTTCTCGTCGACCAACTCGGAAAGCCTGCAACTCTGCACAGAAGGGCTTGGGTATGAAAGCTTAGATGATGTTGAGGATTTGAAAGGGGGGATGGATGGAGAGGAATGGCAGAGGGAGGATGAGGGAGAAAGGAGCTTAAATAAACAGATTCAGTATCCAAATTTGAAGCCTGGAATGATTTGCAGGACAAAAACAGCAAATATGGAAGATTTTCCTCCACCAATTTCTTGTATGGGAAAGAGTGGGAAGCCTTGGGTTGGTTTCAAATCTTATAGGTATGGTGGAAGGTTTATATTGAAGGAAGTAAGAGTTCCCACCCATGAATTTCTACATGCTTCCAGAGAAAATGGACGCCTGAAACTGCATATTCTTGTATCAAATGAGCAGACCAGAGAGACCAAGGAAGAAGACAACGACGGCAACAACAAGAACAACCATGAAAATACTATTGGGAAATGCAAGGTTGAAACTAGACCATGA

mRNA sequence

ATGGCTGCTGCCTGTGGAAGCCTACAACACATCTTTGAAAACCCATTACCAGAAAGTCCAACCCTTCTTGAAACTCTCTCATCATGGAACCAGATTATGCCTCTGAAGCCCACCGATCACTCGTCCTTTACAGAGATCTTTGGAGAGCTTCATTTCAAAGAGAGTTTTGTTCCTCATTCTTTCTCATCCCTGTCGTCTTTGACAGAATCGAATTCTCCATCTTCCAATGACCTGTGGAAAGAACCATCCTCAAATGGTGAACATGAATGTTCCAGCTTCCATAGAAAGAGCAATAGCTTCTCGTCGACCAACTCGGAAAGCCTGCAACTCTGCACAGAAGGGCTTGGGTATGAAAGCTTAGATGATGTTGAGGATTTGAAAGGGGGGATGGATGGAGAGGAATGGCAGAGGGAGGATGAGGGAGAAAGGAGCTTAAATAAACAGATTCAGTATCCAAATTTGAAGCCTGGAATGATTTGCAGGACAAAAACAGCAAATATGGAAGATTTTCCTCCACCAATTTCTTGTATGGGAAAGAGTGGGAAGCCTTGGGTTGGTTTCAAATCTTATAGGTATGGTGGAAGGTTTATATTGAAGGAAGTAAGAGTTCCCACCCATGAATTTCTACATGCTTCCAGAGAAAATGGACGCCTGAAACTGCATATTCTTGTATCAAATGAGCAGACCAGAGAGACCAAGGAAGAAGACAACGACGGCAACAACAAGAACAACCATGAAAATACTATTGGGAAATGCAAGGTTGAAACTAGACCATGA

Coding sequence (CDS)

ATGGCTGCTGCCTGTGGAAGCCTACAACACATCTTTGAAAACCCATTACCAGAAAGTCCAACCCTTCTTGAAACTCTCTCATCATGGAACCAGATTATGCCTCTGAAGCCCACCGATCACTCGTCCTTTACAGAGATCTTTGGAGAGCTTCATTTCAAAGAGAGTTTTGTTCCTCATTCTTTCTCATCCCTGTCGTCTTTGACAGAATCGAATTCTCCATCTTCCAATGACCTGTGGAAAGAACCATCCTCAAATGGTGAACATGAATGTTCCAGCTTCCATAGAAAGAGCAATAGCTTCTCGTCGACCAACTCGGAAAGCCTGCAACTCTGCACAGAAGGGCTTGGGTATGAAAGCTTAGATGATGTTGAGGATTTGAAAGGGGGGATGGATGGAGAGGAATGGCAGAGGGAGGATGAGGGAGAAAGGAGCTTAAATAAACAGATTCAGTATCCAAATTTGAAGCCTGGAATGATTTGCAGGACAAAAACAGCAAATATGGAAGATTTTCCTCCACCAATTTCTTGTATGGGAAAGAGTGGGAAGCCTTGGGTTGGTTTCAAATCTTATAGGTATGGTGGAAGGTTTATATTGAAGGAAGTAAGAGTTCCCACCCATGAATTTCTACATGCTTCCAGAGAAAATGGACGCCTGAAACTGCATATTCTTGTATCAAATGAGCAGACCAGAGAGACCAAGGAAGAAGACAACGACGGCAACAACAAGAACAACCATGAAAATACTATTGGGAAATGCAAGGTTGAAACTAGACCATGA

Protein sequence

MAAACGSLQHIFENPLPESPTLLETLSSWNQIMPLKPTDHSSFTEIFGELHFKESFVPHSFSSLSSLTESNSPSSNDLWKEPSSNGEHECSSFHRKSNSFSSTNSESLQLCTEGLGYESLDDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVSNEQTRETKEEDNDGNNKNNHENTIGKCKVETRP
Homology
[Close]
BLAST of ClCG01G012170 vs. TrEMBL
Match: A0A0A0LVU3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G166760 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 7.4e-121
Identity = 224/258 (86.82%), Postives = 234/258 (90.70%), Query Frame = 1 

Query: 3   AACGSLQHIFENPLPESPTLLETLSSWNQIMPLKPTDHSSFTEIFGELHFKESFVPHSFS 62
           AACGSLQHIFENPLPE+ TL E LSSWNQIMPLKPT+ SSFTEIFGELHFKESFVPHSFS
Sbjct: 2   AACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSFS 61

Query: 63  SLSSLTES-NSPSS-NDLWKEPSSNGEHECSSFHRKSNSFSSTNSESLQLCTEGLGYESL 122
           SLSSLTES NSPS+ +D+WKEPSSNGE E SSFHRKSNSFSSTNSESLQLCTEGLGYESL
Sbjct: 62  SLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYESL 121

Query: 123 DDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMEDFPPPISCMGKS 182
           DDVEDLKG MD +EWQ EDE ER+L KQI YPNLKPGMI RTK ANMEDFPPPISCMGKS
Sbjct: 122 DDVEDLKGVMDEKEWQ-EDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS 181

Query: 183 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVSNEQTRETKEEDNDGN 242
           GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILV NEQTRE ++E +D  
Sbjct: 182 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADD-- 241

Query: 243 NKNNHENTIGKCKVETRP 259
           N  N ENTIGKCKVETRP
Sbjct: 242 NNKNCENTIGKCKVETRP 256

[Close]
BLAST of ClCG01G012170 vs. TrEMBL
Match: A0A067KDV5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12692 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.5e-60
Identity = 136/275 (49.45%), Postives = 177/275 (64.36%), Query Frame = 1 

Query: 3   AACGSLQHIFENPLPESP-TLLETLSSWNQIMPLKPTDHSSFTEIFGELHFKE------- 62
           AACGSLQHIFE PL ++P TLLE+LSSWNQI P+KP + SSFTEIFGELHF+E       
Sbjct: 2   AACGSLQHIFEKPLSQTPATLLESLSSWNQIKPVKPIEQSSFTEIFGELHFEENSQSTSS 61

Query: 63  --SFVPHSFSSLSSL--------------TESNSPSSNDLWKEPSSN------GEHECSS 122
             SF   SFSS SS                  N  + ND  K PS +        H+ + 
Sbjct: 62  PPSFPVSSFSSASSSFIDIIPRAAPSNINKNDNIDNQNDNKKIPSLDFFSATPKNHQYTG 121

Query: 123 FHRKSNSFSSTNSESLQLCTEGLGYESLDDVEDLKGGMDGEEWQREDEGERSLNKQIQYP 182
           FH+  +SFS  N E+LQLCTEGLG+ESLDDVEDLK  ++ E+WQ +++ + S  +     
Sbjct: 122 FHKNGDSFSPRNYENLQLCTEGLGFESLDDVEDLKNDIN-EDWQHQED-KVSFTRHSALE 181

Query: 183 NLKPGMICRTKTANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHAS 242
           N + G I R++++    FPPPISC+GKSGKPWV FKSYR+ GRF+LK++  P+ EFLHA 
Sbjct: 182 N-QSGEIRRSRSSGRA-FPPPISCIGKSGKPWVSFKSYRHDGRFVLKQILTPSQEFLHAH 241

Query: 243 RENGRLKLHILVSNEQTRETKEEDNDGNNKNNHEN 248
           RENGRLKLH++   ++  E ++ED +   + N EN
Sbjct: 242 RENGRLKLHLVQPRDEILEEEDEDEEVVEEENEEN 272

[Close]
BLAST of ClCG01G012170 vs. TrEMBL
Match: A0A061GV87_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_041386 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.5e-60
Identity = 146/271 (53.87%), Postives = 172/271 (63.47%), Query Frame = 1 

Query: 3   AACGSLQHIFENPLPESPTLLETLSSWNQIMP-LKPTDHSSFTEIFGELHFKES------ 62
           AACGSLQHIFENPLPE+PTLLE+LSSWNQI P +KP + SSFTEIFGELHFKE+      
Sbjct: 2   AACGSLQHIFENPLPENPTLLESLSSWNQIKPAIKPIEPSSFTEIFGELHFKENSKSSSA 61

Query: 63  ----FVPHSFSSLSSLTESNSP---SSNDLWKEPSSNGEHEC--------------SSFH 122
                 P S +S+  L+  NS    S ND + E   N                   ++ H
Sbjct: 62  SSFPISPFSSTSIIDLSPQNSAFKLSKNDTFNENDENNNRSSPPEIFPSTPEITKYTNCH 121

Query: 123 RKSNSFSSTNSESLQLCTEGLGYESLDDVEDLKGGMDGEEWQREDEGERSLN--KQIQYP 182
           +KS SFS  NSESLQLCTEGLG+ES DDVEDLK  M  E WQ ++E E S+N  K     
Sbjct: 122 KKSESFS-WNSESLQLCTEGLGFESSDDVEDLKNEMK-EGWQSKEEKESSINTTKHTTTE 181

Query: 183 NLKPGMICRTKTANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHAS 239
           NL  G   R +T     FPPPISC+GKSGKPWV FKSYR  GRF+LKEVR+PT EFLHA 
Sbjct: 182 NLC-GEFRRPRTRGGA-FPPPISCIGKSGKPWVCFKSYRQDGRFVLKEVRIPTQEFLHAC 241

[Close]
BLAST of ClCG01G012170 vs. TrEMBL
Match: F6HHF4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00570 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.4e-58
Identity = 130/273 (47.62%), Postives = 172/273 (63.00%), Query Frame = 1 

Query: 3   AACGSLQHIFENPLPESPTLLETLSSWNQIMPLKPTDHSSFTEIFGELHFKESFV----- 62
           AACGSLQHIFE PLPE+PTL++TLSSWNQI  +KP +  SFTEIFGELHFKE+       
Sbjct: 2   AACGSLQHIFEKPLPENPTLMDTLSSWNQIKSMKPPEQPSFTEIFGELHFKENSELLSSS 61

Query: 63  -------PHSFSSLSSLTESNSPSS------------NDLWKEPSSNGEHECSSF---HR 122
                  P + SS SSL+ ++S SS            N+ W E     +   + +   HR
Sbjct: 62  SYLSSPHPPTSSSSSSLSSTSSTSSLIDFNPQLRIEKNENWGEKGEENKGPLNPYVSRHR 121

Query: 123 KSNSFSSTNSESLQLCTEGLGYESLDDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLK 182
            S+SFSS  SESLQLCTEGLG+ES DDVED+   +  +   +E+   R   ++  Y   +
Sbjct: 122 NSDSFSSMKSESLQLCTEGLGFESCDDVEDVHNEIKDDWENQEERVTRHSPRENAYTEFR 181

Query: 183 PGMICRTKTANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASREN 242
                R++T     FPPPISC+GKSGKPWV FKSYR+ GRF+LKE+R+P  E LHA RE+
Sbjct: 182 -----RSRTQGGA-FPPPISCIGKSGKPWVSFKSYRHDGRFVLKEIRIPNQELLHACRED 241

Query: 243 GRLKLHILVSNEQTRETKEED-NDGNNKNNHEN 248
           GRLKLH +  +E   E +E+D  D +N++ +++
Sbjct: 242 GRLKLHFVQPDEILEEDEEQDVEDTDNEDEYDD 268

[Close]
BLAST of ClCG01G012170 vs. TrEMBL
Match: W9R5C2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022326 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.4e-57
Identity = 148/299 (49.50%), Postives = 183/299 (61.20%), Query Frame = 1 

Query: 3   AACGSLQHIFENPLPESPTLLETLSSWNQIMPLKPT---DHSSFTEIFGELHFKESFVPH 62
           AACGSLQHIFENPLPE+PTLLE+LS WNQI P+K     + SSFTEIFGELHFKE+ +  
Sbjct: 2   AACGSLQHIFENPLPENPTLLESLSPWNQIKPVKKPSNIEQSSFTEIFGELHFKENSLFL 61

Query: 63  SFSSLSSLTESNSPSSN---DLWKEPSSNGEHE----------------CSSFHRKSNSF 122
           S SS S+   S+S SS    DL  +  +  + E                 +S H+ S+SF
Sbjct: 62  SSSSSSAPVSSSSSSSLVDLDLKSKFENRYDEEKKIITPPLEYSFSSSKYNSSHKNSDSF 121

Query: 123 SSTNSESLQLCTEGLGYESLD-DVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMI 182
           S  NSESLQLCTEGLG+ES D +VEDL    +  +WQ+ D  + S++K     NL+ G+I
Sbjct: 122 SLRNSESLQLCTEGLGFESSDYEVEDLT--KEARDWQKPDLEKPSVHKSEN--NLRQGLI 181

Query: 183 C-----RTKTA---NMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHA 242
                 R++TA       FPPPISC+ KSGKPWV FKSYR  GRF+LKE+RV + EFLHA
Sbjct: 182 VGETVKRSRTAAGGGKGGFPPPISCLSKSGKPWVCFKSYRQDGRFVLKEIRVRSQEFLHA 241

Query: 243 SRENGRLKLHILVSNEQTRETK---------EEDNDGNNKNNHE----NTIGKCKVETR 258
            RE+GRLKLH +  N++  E K         EED D N   N E     T G+C  ETR
Sbjct: 242 CREDGRLKLHFVQPNDEIPEDKEEEELDGDLEEDGDDNGVENIEEDVHETEGRC--ETR 294

[Close]
BLAST of ClCG01G012170 vs. TAIR10
Match: AT5G22390.1 (AT5G22390.1 Protein of unknown function (DUF3049))

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-17
Identity = 75/241 (31.12%), Postives = 106/241 (43.98%), Query Frame = 1 

Query: 3   AACGSLQHIFENPLPESP--TLLETLSS---WNQIMPLKPTDHSSFTEIFGELHFKESFV 62
           AA GS   IF+NP  ++   + L+TLSS   WN    L  T H   T             
Sbjct: 2   AAYGSFHRIFDNPRQDNSPKSFLDTLSSSSPWNPSKGLHVTTHHDET------------- 61

Query: 63  PHSFSSLSSLTESNSPSSNDLWKEPSSNGEHECSSFHRKSNSFSSTNSESLQLCTEGLGY 122
           P  F+ +            +L    SS+  +E +S            + SLQLCTEGLG 
Sbjct: 62  PPPFTEIFG----------ELHFRESSHSSYEKTS----------AENSSLQLCTEGLGS 121

Query: 123 ESLDDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMEDFPPPISCM 182
           ES   +ED K   DG+    E E +   N        +P      +    +++PP ++ M
Sbjct: 122 ESYYGLEDEKVNGDGDGDDDEIEVKGKDNGSNDEEEWEP------RRKERKEYPPAMTRM 181

Query: 183 GKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVSNEQTRETKEEDN 239
                    FK+YR  GR +L+EVR+P  EFL ASRE+GRL+L ++   +   E +E + 
Sbjct: 182 S--------FKTYRKEGRLVLEEVRIPRREFLRASREDGRLRLKLVQPEDDHDEEEENEK 195

[Close]
BLAST of ClCG01G012170 vs. TAIR10
Match: AT1G22110.1 (AT1G22110.1 structural constituent of ribosome)

HSP 1 Score: 56.6 bits (135), Expect = 2.6e-08
Identity = 50/179 (27.93%), Postives = 79/179 (44.13%), Query Frame = 1 

Query: 62  SSLSSLTESNSPSSNDLWKEPSSNGEHECSSFHRKSNSFSSTNSESLQLCTEGLGYESLD 121
           +S SS + S+  SS+D   +  S    + S F   S+  S T+S S     + +G ES  
Sbjct: 4   ASSSSDSSSSMASSSD---QSLSINSDQTSPFVT-SSMLSRTSSSSSSAVGDYIGTESCF 63

Query: 122 DVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMEDFPPPISCMGKSG 181
           D+     G D      E      +  + +Y   +       + A   +FPPPI  + ++G
Sbjct: 64  DILSADEGNDVVSVASEP-----VKSRFRYGGRRREER-EARAAAAREFPPPIPLLAQTG 123

Query: 182 K-----PWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVSNEQTRETKEE 236
                 PWV  +     GR IL+E +V  HE+  A+R NGRL LH++  ++   +  +E
Sbjct: 124 NLLPHMPWVLKRVVTSDGRLILREEKVRHHEYFRANRSNGRLTLHLVPLDDDVFDLPQE 172

[Close]
BLAST of ClCG01G012170 vs. NCBI nr
Match: gi|659071648|ref|XP_008461212.1| (PREDICTED: protein FANTASTIC FOUR 4-like [Cucumis melo])

HSP 1 Score: 446.8 bits (1148), Expect = 2.5e-122
Identity = 222/258 (86.05%), Postives = 236/258 (91.47%), Query Frame = 1 

Query: 3   AACGSLQHIFENPLPESPTLLETLSSWNQIMPLKPTDHSSFTEIFGELHFKESFVPHSFS 62
           AACGSLQHIFENPLPE+PTLLE LSSWNQIMPLKPT+ SSFTEIFGELHFKESFVPHSFS
Sbjct: 2   AACGSLQHIFENPLPENPTLLEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSFS 61

Query: 63  SLSSLTESNSPSS--NDLWKEPSSNGEHECSSFHRKSNSFSSTNSESLQLCTEGLGYESL 122
           SLSSLTES++ +S  +DLWKEP SNGE E S+FHRKSNSFSSTNSESLQLCTEGLGYESL
Sbjct: 62  SLSSLTESSNSTSAADDLWKEPLSNGEREPSNFHRKSNSFSSTNSESLQLCTEGLGYESL 121

Query: 123 DDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMEDFPPPISCMGKS 182
           DDVEDLKG MD +EW +EDE ER+L KQIQYPNLKPGMI RTK+ANMEDFPPPISCMGKS
Sbjct: 122 DDVEDLKGVMDEKEWPKEDEEERTLKKQIQYPNLKPGMINRTKSANMEDFPPPISCMGKS 181

Query: 183 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVSNEQTRETKEEDNDGN 242
           GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILV NEQTRE ++E +D  
Sbjct: 182 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADD-- 241

Query: 243 NKNNHENTIGKCKVETRP 259
           N  N ENTIGKCKVETRP
Sbjct: 242 NHENCENTIGKCKVETRP 257

[Close]
BLAST of ClCG01G012170 vs. NCBI nr
Match: gi|449443640|ref|XP_004139585.1| (PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus])

HSP 1 Score: 441.4 bits (1134), Expect = 1.1e-120
Identity = 224/258 (86.82%), Postives = 234/258 (90.70%), Query Frame = 1 

Query: 3   AACGSLQHIFENPLPESPTLLETLSSWNQIMPLKPTDHSSFTEIFGELHFKESFVPHSFS 62
           AACGSLQHIFENPLPE+ TL E LSSWNQIMPLKPT+ SSFTEIFGELHFKESFVPHSFS
Sbjct: 2   AACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSFS 61

Query: 63  SLSSLTES-NSPSS-NDLWKEPSSNGEHECSSFHRKSNSFSSTNSESLQLCTEGLGYESL 122
           SLSSLTES NSPS+ +D+WKEPSSNGE E SSFHRKSNSFSSTNSESLQLCTEGLGYESL
Sbjct: 62  SLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYESL 121

Query: 123 DDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMEDFPPPISCMGKS 182
           DDVEDLKG MD +EWQ EDE ER+L KQI YPNLKPGMI RTK ANMEDFPPPISCMGKS
Sbjct: 122 DDVEDLKGVMDEKEWQ-EDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS 181

Query: 183 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVSNEQTRETKEEDNDGN 242
           GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILV NEQTRE ++E +D  
Sbjct: 182 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADD-- 241

Query: 243 NKNNHENTIGKCKVETRP 259
           N  N ENTIGKCKVETRP
Sbjct: 242 NNKNCENTIGKCKVETRP 256

[Close]
BLAST of ClCG01G012170 vs. NCBI nr
Match: gi|802621744|ref|XP_012076118.1| (PREDICTED: protein FANTASTIC FOUR 1 [Jatropha curcas])

HSP 1 Score: 241.1 bits (614), Expect = 2.1e-60
Identity = 136/275 (49.45%), Postives = 177/275 (64.36%), Query Frame = 1 

Query: 3   AACGSLQHIFENPLPESP-TLLETLSSWNQIMPLKPTDHSSFTEIFGELHFKE------- 62
           AACGSLQHIFE PL ++P TLLE+LSSWNQI P+KP + SSFTEIFGELHF+E       
Sbjct: 2   AACGSLQHIFEKPLSQTPATLLESLSSWNQIKPVKPIEQSSFTEIFGELHFEENSQSTSS 61

Query: 63  --SFVPHSFSSLSSL--------------TESNSPSSNDLWKEPSSN------GEHECSS 122
             SF   SFSS SS                  N  + ND  K PS +        H+ + 
Sbjct: 62  PPSFPVSSFSSASSSFIDIIPRAAPSNINKNDNIDNQNDNKKIPSLDFFSATPKNHQYTG 121

Query: 123 FHRKSNSFSSTNSESLQLCTEGLGYESLDDVEDLKGGMDGEEWQREDEGERSLNKQIQYP 182
           FH+  +SFS  N E+LQLCTEGLG+ESLDDVEDLK  ++ E+WQ +++ + S  +     
Sbjct: 122 FHKNGDSFSPRNYENLQLCTEGLGFESLDDVEDLKNDIN-EDWQHQED-KVSFTRHSALE 181

Query: 183 NLKPGMICRTKTANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHAS 242
           N + G I R++++    FPPPISC+GKSGKPWV FKSYR+ GRF+LK++  P+ EFLHA 
Sbjct: 182 N-QSGEIRRSRSSGRA-FPPPISCIGKSGKPWVSFKSYRHDGRFVLKQILTPSQEFLHAH 241

Query: 243 RENGRLKLHILVSNEQTRETKEEDNDGNNKNNHEN 248
           RENGRLKLH++   ++  E ++ED +   + N EN
Sbjct: 242 RENGRLKLHLVQPRDEILEEEDEDEEVVEEENEEN 272

[Close]
BLAST of ClCG01G012170 vs. NCBI nr
Match: gi|590586758|ref|XP_007015792.1| (Uncharacterized protein TCM_041386 [Theobroma cacao])

HSP 1 Score: 241.1 bits (614), Expect = 2.1e-60
Identity = 146/271 (53.87%), Postives = 172/271 (63.47%), Query Frame = 1 

Query: 3   AACGSLQHIFENPLPESPTLLETLSSWNQIMP-LKPTDHSSFTEIFGELHFKES------ 62
           AACGSLQHIFENPLPE+PTLLE+LSSWNQI P +KP + SSFTEIFGELHFKE+      
Sbjct: 2   AACGSLQHIFENPLPENPTLLESLSSWNQIKPAIKPIEPSSFTEIFGELHFKENSKSSSA 61

Query: 63  ----FVPHSFSSLSSLTESNSP---SSNDLWKEPSSNGEHEC--------------SSFH 122
                 P S +S+  L+  NS    S ND + E   N                   ++ H
Sbjct: 62  SSFPISPFSSTSIIDLSPQNSAFKLSKNDTFNENDENNNRSSPPEIFPSTPEITKYTNCH 121

Query: 123 RKSNSFSSTNSESLQLCTEGLGYESLDDVEDLKGGMDGEEWQREDEGERSLN--KQIQYP 182
           +KS SFS  NSESLQLCTEGLG+ES DDVEDLK  M  E WQ ++E E S+N  K     
Sbjct: 122 KKSESFS-WNSESLQLCTEGLGFESSDDVEDLKNEMK-EGWQSKEEKESSINTTKHTTTE 181

Query: 183 NLKPGMICRTKTANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHAS 239
           NL  G   R +T     FPPPISC+GKSGKPWV FKSYR  GRF+LKEVR+PT EFLHA 
Sbjct: 182 NLC-GEFRRPRTRGGA-FPPPISCIGKSGKPWVCFKSYRQDGRFVLKEVRIPTQEFLHAC 241

[Close]
BLAST of ClCG01G012170 vs. NCBI nr
Match: gi|731394549|ref|XP_010651876.1| (PREDICTED: suppressor protein SRP40 [Vitis vinifera])

HSP 1 Score: 234.6 bits (597), Expect = 2.0e-58
Identity = 130/273 (47.62%), Postives = 172/273 (63.00%), Query Frame = 1 

Query: 3   AACGSLQHIFENPLPESPTLLETLSSWNQIMPLKPTDHSSFTEIFGELHFKESFV----- 62
           AACGSLQHIFE PLPE+PTL++TLSSWNQI  +KP +  SFTEIFGELHFKE+       
Sbjct: 2   AACGSLQHIFEKPLPENPTLMDTLSSWNQIKSMKPPEQPSFTEIFGELHFKENSELLSSS 61

Query: 63  -------PHSFSSLSSLTESNSPSS------------NDLWKEPSSNGEHECSSF---HR 122
                  P + SS SSL+ ++S SS            N+ W E     +   + +   HR
Sbjct: 62  SYLSSPHPPTSSSSSSLSSTSSTSSLIDFNPQLRIEKNENWGEKGEENKGPLNPYVSRHR 121

Query: 123 KSNSFSSTNSESLQLCTEGLGYESLDDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLK 182
            S+SFSS  SESLQLCTEGLG+ES DDVED+   +  +   +E+   R   ++  Y   +
Sbjct: 122 NSDSFSSMKSESLQLCTEGLGFESCDDVEDVHNEIKDDWENQEERVTRHSPRENAYTEFR 181

Query: 183 PGMICRTKTANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASREN 242
                R++T     FPPPISC+GKSGKPWV FKSYR+ GRF+LKE+R+P  E LHA RE+
Sbjct: 182 -----RSRTQGGA-FPPPISCIGKSGKPWVSFKSYRHDGRFVLKEIRIPNQELLHACRED 241

Query: 243 GRLKLHILVSNEQTRETKEED-NDGNNKNNHEN 248
           GRLKLH +  +E   E +E+D  D +N++ +++
Sbjct: 242 GRLKLHFVQPDEILEEDEEQDVEDTDNEDEYDD 268

The following BLAST results are available for this feature:
BLAST of ClCG01G012170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVU3_CUCSA7.4e-12186.82Uncharacterized protein OS=Cucumis sativus GN=Csa_1G166760 PE=4 SV=1[more]
A0A067KDV5_JATCU1.5e-6049.45Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12692 PE=4 SV=1[more]
A0A061GV87_THECC1.5e-6053.87Uncharacterized protein OS=Theobroma cacao GN=TCM_041386 PE=4 SV=1[more]
F6HHF4_VITVI1.4e-5847.62Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00570 PE=4 SV=... [more]
W9R5C2_9ROSA3.4e-5749.50Uncharacterized protein OS=Morus notabilis GN=L484_022326 PE=4 SV=1[more]
BLAST of ClCG01G012170 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G22390.11.4e-1731.12 Protein of unknown function (DUF3049)[more]
AT1G22110.12.6e-0827.93 structural constituent of ribosome[more]
BLAST of ClCG01G012170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659071648|ref|XP_008461212.1|2.5e-12286.05PREDICTED: protein FANTASTIC FOUR 4-like [Cucumis melo][more]
gi|449443640|ref|XP_004139585.1|1.1e-12086.82PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus][more]
gi|802621744|ref|XP_012076118.1|2.1e-6049.45PREDICTED: protein FANTASTIC FOUR 1 [Jatropha curcas][more]
gi|590586758|ref|XP_007015792.1|2.1e-6053.87Uncharacterized protein TCM_041386 [Theobroma cacao][more]
gi|731394549|ref|XP_010651876.1|2.0e-5847.62PREDICTED: suppressor protein SRP40 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021410FAF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G012170.1ClCG01G012170.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021410The fantastic four familyPFAMPF11250FAFcoord: 170..221
score: 3.0
NoneNo IPR availablePANTHERPTHR33155FAMILY NOT NAMEDcoord: 1..247
score: 1.7
NoneNo IPR availablePANTHERPTHR33155:SF9SUBFAMILY NOT NAMEDcoord: 1..247
score: 1.7